react-msaview 3.1.11 → 3.2.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (191) hide show
  1. package/bundle/index.js +32 -31
  2. package/dist/colorSchemes.d.ts +2 -2
  3. package/dist/colorSchemes.js +3 -4
  4. package/dist/colorSchemes.js.map +1 -1
  5. package/dist/components/Loading.d.ts +1 -1
  6. package/dist/components/Loading.js +4 -4
  7. package/dist/components/Loading.js.map +1 -1
  8. package/dist/components/MSAView.d.ts +1 -1
  9. package/dist/components/MSAView.js +13 -9
  10. package/dist/components/MSAView.js.map +1 -1
  11. package/dist/components/ResizeHandles.d.ts +1 -1
  12. package/dist/components/ResizeHandles.js +2 -2
  13. package/dist/components/SequenceTextArea.js +4 -0
  14. package/dist/components/SequenceTextArea.js.map +1 -1
  15. package/dist/components/TextTrack.d.ts +1 -1
  16. package/dist/components/Track.d.ts +1 -1
  17. package/dist/components/VerticalScrollbar.d.ts +6 -0
  18. package/dist/components/VerticalScrollbar.js +65 -0
  19. package/dist/components/VerticalScrollbar.js.map +1 -0
  20. package/dist/components/dialogs/AddTrackDialog.d.ts +1 -1
  21. package/dist/components/dialogs/DomainDialog.d.ts +6 -0
  22. package/dist/components/dialogs/DomainDialog.js +19 -0
  23. package/dist/components/dialogs/DomainDialog.js.map +1 -0
  24. package/dist/components/dialogs/ExportSVGDialog.d.ts +1 -1
  25. package/dist/components/dialogs/FeatureDialog.d.ts +1 -1
  26. package/dist/components/dialogs/FeatureDialog.js.map +1 -1
  27. package/dist/components/dialogs/InterProScanDialog.d.ts +4 -4
  28. package/dist/components/dialogs/InterProScanDialog.js +37 -8
  29. package/dist/components/dialogs/InterProScanDialog.js.map +1 -1
  30. package/dist/components/dialogs/MetadataDialog.d.ts +1 -1
  31. package/dist/components/dialogs/SettingsDialog.d.ts +1 -1
  32. package/dist/components/dialogs/SettingsDialog.js +10 -1
  33. package/dist/components/dialogs/SettingsDialog.js.map +1 -1
  34. package/dist/components/dialogs/TabPanel.d.ts +6 -0
  35. package/dist/components/dialogs/TabPanel.js +6 -0
  36. package/dist/components/dialogs/TabPanel.js.map +1 -0
  37. package/dist/components/dialogs/TracklistDialog.d.ts +1 -1
  38. package/dist/components/dialogs/UserProvidedDomainsDialog.d.ts +7 -0
  39. package/dist/components/dialogs/UserProvidedDomainsDialog.js +58 -0
  40. package/dist/components/dialogs/UserProvidedDomainsDialog.js.map +1 -0
  41. package/dist/components/header/Header.d.ts +1 -1
  42. package/dist/components/header/Header.js +8 -5
  43. package/dist/components/header/Header.js.map +1 -1
  44. package/dist/components/header/HeaderInfoArea.d.ts +1 -1
  45. package/dist/components/header/HeaderMenu.d.ts +1 -1
  46. package/dist/components/header/HeaderMenuExtra.d.ts +1 -1
  47. package/dist/components/header/HeaderMenuExtra.js +54 -41
  48. package/dist/components/header/HeaderMenuExtra.js.map +1 -1
  49. package/dist/components/header/HeaderStatusArea.d.ts +1 -1
  50. package/dist/components/header/HeaderStatusArea.js +2 -1
  51. package/dist/components/header/HeaderStatusArea.js.map +1 -1
  52. package/dist/components/header/MultiAlignmentSelector.d.ts +1 -1
  53. package/dist/components/header/ZoomControls.js +31 -1
  54. package/dist/components/header/ZoomControls.js.map +1 -1
  55. package/dist/components/import/ImportForm.d.ts +1 -1
  56. package/dist/components/import/ImportForm.js +1 -1
  57. package/dist/components/import/ImportForm.js.map +1 -1
  58. package/dist/components/import/ImportFormExamples.d.ts +1 -1
  59. package/dist/components/import/ImportFormExamples.js +10 -8
  60. package/dist/components/import/ImportFormExamples.js.map +1 -1
  61. package/dist/components/import/util.d.ts +2 -2
  62. package/dist/components/minimap/Minimap.d.ts +1 -1
  63. package/dist/components/minimap/Minimap.js +14 -15
  64. package/dist/components/minimap/Minimap.js.map +1 -1
  65. package/dist/components/minimap/MinimapSVG.d.ts +1 -1
  66. package/dist/components/minimap/MinimapSVG.js +1 -1
  67. package/dist/components/minimap/MinimapSVG.js.map +1 -1
  68. package/dist/components/msa/MSACanvas.d.ts +1 -1
  69. package/dist/components/msa/MSACanvas.js +3 -3
  70. package/dist/components/msa/MSACanvas.js.map +1 -1
  71. package/dist/components/msa/MSACanvasBlock.d.ts +3 -3
  72. package/dist/components/msa/MSACanvasBlock.js +4 -3
  73. package/dist/components/msa/MSACanvasBlock.js.map +1 -1
  74. package/dist/components/msa/MSAMouseoverCanvas.d.ts +2 -2
  75. package/dist/components/msa/MSAMouseoverCanvas.js +1 -1
  76. package/dist/components/msa/MSAMouseoverCanvas.js.map +1 -1
  77. package/dist/components/msa/MSAPanel.d.ts +1 -1
  78. package/dist/components/msa/renderBoxFeatureCanvasBlock.d.ts +1 -1
  79. package/dist/components/msa/renderBoxFeatureCanvasBlock.js +2 -3
  80. package/dist/components/msa/renderBoxFeatureCanvasBlock.js.map +1 -1
  81. package/dist/components/msa/renderMSABlock.d.ts +2 -2
  82. package/dist/components/msa/renderMSABlock.js +12 -12
  83. package/dist/components/msa/renderMSABlock.js.map +1 -1
  84. package/dist/components/msa/renderMSAMouseover.d.ts +1 -1
  85. package/dist/components/tree/TreeBranchMenu.d.ts +1 -1
  86. package/dist/components/tree/TreeCanvas.d.ts +1 -1
  87. package/dist/components/tree/TreeCanvas.js +13 -12
  88. package/dist/components/tree/TreeCanvas.js.map +1 -1
  89. package/dist/components/tree/TreeCanvasBlock.d.ts +1 -1
  90. package/dist/components/tree/TreeCanvasBlock.js +2 -1
  91. package/dist/components/tree/TreeCanvasBlock.js.map +1 -1
  92. package/dist/components/tree/TreeNodeMenu.d.ts +1 -1
  93. package/dist/components/tree/TreeNodeMenu.js +2 -2
  94. package/dist/components/tree/TreeNodeMenu.js.map +1 -1
  95. package/dist/components/tree/TreePanel.d.ts +1 -1
  96. package/dist/components/tree/TreeRuler.d.ts +1 -1
  97. package/dist/components/tree/dialogs/TreeNodeInfoDialog.d.ts +1 -1
  98. package/dist/components/tree/renderTreeCanvas.d.ts +3 -3
  99. package/dist/components/tree/renderTreeCanvas.js +25 -9
  100. package/dist/components/tree/renderTreeCanvas.js.map +1 -1
  101. package/dist/components/util.js +1 -1
  102. package/dist/components/util.js.map +1 -1
  103. package/dist/fetchUtils.d.ts +1 -1
  104. package/dist/fetchUtils.js.map +1 -1
  105. package/dist/launchInterProScan.d.ts +9 -3
  106. package/dist/launchInterProScan.js +57 -22
  107. package/dist/launchInterProScan.js.map +1 -1
  108. package/dist/model/DataModel.d.ts +5 -1
  109. package/dist/model/DataModel.js +10 -1
  110. package/dist/model/DataModel.js.map +1 -1
  111. package/dist/model/DialogQueue.d.ts +1 -1
  112. package/dist/model.d.ts +138 -43
  113. package/dist/model.js +235 -110
  114. package/dist/model.js.map +1 -1
  115. package/dist/parseNewick.js +1 -1
  116. package/dist/parseNewick.js.map +1 -1
  117. package/dist/parsers/ClustalMSA.d.ts +1 -1
  118. package/dist/parsers/FastaMSA.d.ts +1 -1
  119. package/dist/parsers/StockholmMSA.d.ts +1 -1
  120. package/dist/parsers/StockholmMSA.js.map +1 -1
  121. package/dist/renderToSvg.d.ts +2 -2
  122. package/dist/renderToSvg.js +3 -28
  123. package/dist/renderToSvg.js.map +1 -1
  124. package/dist/reparseTree.d.ts +1 -1
  125. package/dist/util.d.ts +2 -2
  126. package/dist/util.js +0 -2
  127. package/dist/util.js.map +1 -1
  128. package/dist/version.d.ts +1 -1
  129. package/dist/version.js +1 -1
  130. package/dist/version.js.map +1 -1
  131. package/package.json +5 -2
  132. package/src/colorSchemes.ts +3 -2
  133. package/src/components/Checkbox2.tsx +1 -1
  134. package/src/components/Loading.tsx +11 -5
  135. package/src/components/MSAView.tsx +27 -18
  136. package/src/components/ResizeHandles.tsx +3 -3
  137. package/src/components/SequenceTextArea.tsx +8 -0
  138. package/src/components/TextTrack.tsx +1 -1
  139. package/src/components/Track.tsx +1 -1
  140. package/src/components/VerticalScrollbar.tsx +85 -0
  141. package/src/components/dialogs/AddTrackDialog.tsx +2 -2
  142. package/src/components/dialogs/DomainDialog.tsx +38 -0
  143. package/src/components/dialogs/ExportSVGDialog.tsx +1 -1
  144. package/src/components/dialogs/FeatureDialog.tsx +3 -3
  145. package/src/components/dialogs/InterProScanDialog.tsx +49 -11
  146. package/src/components/dialogs/MetadataDialog.tsx +1 -1
  147. package/src/components/dialogs/SettingsDialog.tsx +38 -3
  148. package/src/components/dialogs/TabPanel.tsx +19 -0
  149. package/src/components/dialogs/TracklistDialog.tsx +1 -1
  150. package/src/components/dialogs/UserProvidedDomainsDialog.tsx +133 -0
  151. package/src/components/header/Header.tsx +9 -6
  152. package/src/components/header/HeaderInfoArea.tsx +1 -1
  153. package/src/components/header/HeaderMenu.tsx +1 -1
  154. package/src/components/header/HeaderMenuExtra.tsx +65 -48
  155. package/src/components/header/HeaderStatusArea.tsx +3 -2
  156. package/src/components/header/MultiAlignmentSelector.tsx +1 -1
  157. package/src/components/header/ZoomControls.tsx +34 -0
  158. package/src/components/import/ImportForm.tsx +3 -3
  159. package/src/components/import/ImportFormExamples.tsx +19 -17
  160. package/src/components/import/util.ts +2 -2
  161. package/src/components/minimap/Minimap.tsx +15 -22
  162. package/src/components/minimap/MinimapSVG.tsx +2 -2
  163. package/src/components/msa/MSACanvas.tsx +11 -4
  164. package/src/components/msa/MSACanvasBlock.tsx +5 -4
  165. package/src/components/msa/MSAMouseoverCanvas.tsx +2 -6
  166. package/src/components/msa/MSAPanel.tsx +1 -1
  167. package/src/components/msa/renderBoxFeatureCanvasBlock.ts +5 -6
  168. package/src/components/msa/renderMSABlock.ts +37 -17
  169. package/src/components/msa/renderMSAMouseover.ts +1 -1
  170. package/src/components/tree/TreeBranchMenu.tsx +1 -1
  171. package/src/components/tree/TreeCanvas.tsx +15 -16
  172. package/src/components/tree/TreeCanvasBlock.tsx +3 -2
  173. package/src/components/tree/TreeNodeMenu.tsx +3 -3
  174. package/src/components/tree/TreePanel.tsx +1 -1
  175. package/src/components/tree/TreeRuler.tsx +1 -1
  176. package/src/components/tree/dialogs/TreeNodeInfoDialog.tsx +1 -1
  177. package/src/components/tree/renderTreeCanvas.ts +32 -12
  178. package/src/components/util.ts +1 -1
  179. package/src/fetchUtils.ts +2 -2
  180. package/src/launchInterProScan.ts +69 -24
  181. package/src/model/DataModel.ts +10 -0
  182. package/src/model/DialogQueue.ts +1 -1
  183. package/src/model.ts +262 -143
  184. package/src/parseNewick.ts +1 -1
  185. package/src/parsers/ClustalMSA.ts +1 -1
  186. package/src/parsers/FastaMSA.ts +1 -1
  187. package/src/parsers/StockholmMSA.ts +1 -1
  188. package/src/renderToSvg.tsx +6 -30
  189. package/src/reparseTree.ts +1 -1
  190. package/src/util.ts +2 -4
  191. package/src/version.ts +1 -1

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