protvista-uniprot 2.13.2 → 3.0.0

package/src/utils.ts

@@ -0,0 +1,37 @@
+export const renameProperties = (features) =>
+  features.map((ft) => ({
+    ...ft,
+    start: ft.begin || undefined,
+  }));
+
+export const loadComponent = (
+  name: string,
+  elementConstructor: CustomElementConstructor
+) => {
+  if (!customElements.get(name)) {
+    customElements.define(name, elementConstructor);
+  }
+};
+
+// Returns an object of the form url => payload json
+// getUrl optional function modifies url string
+export const fetchAll = async (urls: string[], getUrl = null) =>
+  Object.fromEntries(
+    await Promise.all(
+      urls.map(async (url) => {
+        try {
+          const response = await fetch(getUrl ? getUrl(url) : url);
+          if (!response.ok) {
+            // TODO handle this better based on error code
+            // Fail silently for now
+            console.warn(`HTTP error status: ${response.status} at ${url}`);
+            return [url, null];
+          }
+          return [url, await response.json()];
+        } catch (error) {
+          console.warn(`Failed to fetch or parse JSON from ${url}:`, error);
+          return [url, null]; // or handle error data as needed
+        }
+      })
+    )
+  );

package/dist/es/commonTypes.js

@@ -1,2 +0,0 @@
-export {};
-//# sourceMappingURL=commonTypes.js.map

package/dist/es/commonTypes.js.map

@@ -1 +0,0 @@
-{"version":3,"file":"commonTypes.js","sourceRoot":"","sources":["../../src/commonTypes.ts"],"names":[],"mappings":""}

package/dist/es/filterConfig.d.ts

@@ -1,20 +0,0 @@
-export declare const getFilteredVariants: (variants: ProtvistaVariationData, callbackFilter: (variantPos: ProtvistaVariant) => void) => {
-    variants: ProtvistaVariant[];
-}[];
-declare const filterConfig: {
-    name: string;
-    type: {
-        name: string;
-        text: string;
-    };
-    options: {
-        label: string;
-        color: string;
-    };
-    filterPredicate: (variantPos: any) => any;
-    filterData: (variants: ProtvistaVariationData) => {
-        variants: ProtvistaVariant[];
-    }[];
-}[];
-export declare const colorConfig: (variant: any) => string;
-export default filterConfig;

package/dist/es/filterConfig.js.map

@@ -1 +0,0 @@
-{"version":3,"file":"filterConfig.js","sourceRoot":"","sources":["../../src/filterConfig.ts"],"names":[],"mappings":"AAEA,MAAM,WAAW,GAAG;IAClB,cAAc,EAAE,SAAS;IACzB,iBAAiB,EAAE,SAAS;IAC5B,cAAc,EAAE,SAAS;IACzB,WAAW,EAAE,SAAS;CACvB,CAAC;AAEF,MAAM,YAAY,GAAG;IACnB,SAAS,EAAE,CAAC,YAAY,EAAE,cAAc,EAAE,eAAe,EAAE,cAAc,CAAC;CAC3E,CAAC;AAEF,MAAM,mBAAmB,GAAG,CAC1B,oBAA4C,EAC5C,MAAgB,EAChB,EAAE,CACF,oBAAoB,CAAC,IAAI,CAAC,CAAC,EAAE,IAAI,EAAE,EAAE,EAAE;IACrC,OAAO,MAAM,CAAC,IAAI,CAAC,CAAC,EAAE,EAAE,EAAE,CAAC,EAAE,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC,CAAC;AAC5C,CAAC,CAAC,CAAC;AAEL,MAAM,CAAC,MAAM,mBAAmB,GAAG,CACjC,QAAgC,EAChC,cAAsD,EACtD,EAAE,CACF,QAAQ,CAAC,GAAG,CAAC,CAAC,OAAO,EAAE,EAAE;IACvB,MAAM,gBAAgB,GAAG,OAAO,CAAC,QAAQ,CAAC,MAAM,CAAC,CAAC,UAAU,EAAE,EAAE,CAC9D,cAAc,CAAC,UAAU,CAAC,CAC3B,CAAC;IACF,OAAO;QACL,GAAG,OAAO;QACV,QAAQ,EAAE,CAAC,GAAG,gBAAgB,CAAC;KAChC,CAAC;AACJ,CAAC,CAAC,CAAC;AAEL,MAAM,gBAAgB,GAAG;IACvB,OAAO,EAAE,CAAC,UAAU,EAAE,EAAE,WACtB,OAAA,MAAA,UAAU,CAAC,WAAW,0CAAE,IAAI,CAAC,CAAC,WAAW,EAAE,EAAE,CAAC,WAAW,CAAC,OAAO,CAAC,CAAA,EAAA;IACpE,SAAS,EAAE,CAAC,UAAU,EAAE,EAAE,CAAC,UAAU,CAAC,cAAc;IACpD,UAAU,EAAE,CAAC,UAAU,EAAE,EAAE;;QACzB,OAAA,MAAA,UAAU,CAAC,WAAW,0CAAE,IAAI,CAC1B,CAAC,WAAW,EAAE,EAAE,CAAC,WAAW,CAAC,OAAO,KAAK,KAAK,CAC/C,CAAA;KAAA;IACH,SAAS,EAAE,CAAC,UAAU,EAAE,EAAE,CACxB,CAAC,OAAO,UAAU,CAAC,qBAAqB,KAAK,WAAW;QACtD,CAAC,UAAU,CAAC,cAAc,CAAC;QAC7B,CAAC,UAAU,CAAC,qBAAqB;YAC/B,mBAAmB,CACjB,UAAU,CAAC,qBAAqB,EAChC,YAAY,CAAC,SAAS,CACvB,CAAC;IACN,OAAO,EAAE,CAAC,UAAU,EAAE,EAAE,CACtB,UAAU,CAAC,SAAS;QACpB,CAAC,UAAU,CAAC,SAAS,CAAC,QAAQ,CAAC,SAAS,CAAC;YACvC,UAAU,CAAC,SAAS,CAAC,QAAQ,CAAC,SAAS,CAAC,CAAC;IAC7C,OAAO,EAAE,CAAC,UAAU,EAAE,EAAE,CACtB,UAAU,CAAC,SAAS;QACpB,CAAC,UAAU,CAAC,SAAS,CAAC,QAAQ,CAAC,SAAS,CAAC;YACvC,UAAU,CAAC,SAAS,CAAC,QAAQ,CAAC,SAAS,CAAC,CAAC;IAC7C,GAAG,EAAE,CAAC,UAAU,EAAE,EAAE,CAClB,UAAU,CAAC,UAAU,KAAK,mBAAmB;QAC7C,UAAU,CAAC,UAAU,KAAK,OAAO;CACpC,CAAC;AAEF,MAAM,YAAY,GAAG;IACnB;QACE,IAAI,EAAE,SAAS;QACf,IAAI,EAAE;YACJ,IAAI,EAAE,aAAa;YACnB,IAAI,EAAE,oBAAoB;SAC3B;QACD,OAAO,EAAE;YACP,KAAK,EAAE,iCAAiC;YACxC,KAAK,EAAE,WAAW,CAAC,cAAc;SAClC;QACD,eAAe,EAAE,gBAAgB,CAAC,SAAS,CAAC;QAC5C,UAAU,EAAE,CAAC,QAAgC,EAAE,EAAE,CAC/C,mBAAmB,CAAC,QAAQ,EAAE,gBAAgB,CAAC,SAAS,CAAC,CAAC;KAC7D;IACD;QACE,IAAI,EAAE,WAAW;QACjB,IAAI,EAAE;YACJ,IAAI,EAAE,aAAa;YACnB,IAAI,EAAE,oBAAoB;SAC3B;QACD,OAAO,EAAE;YACP,KAAK,EAAE,uBAAuB;YAC9B,KAAK,EAAE,WAAW,CAAC,cAAc;SAClC;QACD,eAAe,EAAE,gBAAgB,CAAC,WAAW,CAAC;QAC9C,UAAU,EAAE,CAAC,QAAgC,EAAE,EAAE,CAC/C,mBAAmB,CAAC,QAAQ,EAAE,gBAAgB,CAAC,WAAW,CAAC,CAAC;KAC/D;IACD;QACE,IAAI,EAAE,YAAY;QAClB,IAAI,EAAE;YACJ,IAAI,EAAE,aAAa;YACnB,IAAI,EAAE,oBAAoB;SAC3B;QACD,OAAO,EAAE;YACP,KAAK,EAAE,yBAAyB;YAChC,KAAK,EAAE,WAAW,CAAC,iBAAiB;SACrC;QACD,eAAe,EAAE,gBAAgB,CAAC,YAAY,CAAC;QAC/C,UAAU,EAAE,CAAC,QAAgC,EAAE,EAAE,CAC/C,mBAAmB,CAAC,QAAQ,EAAE,gBAAgB,CAAC,YAAY,CAAC,CAAC;KAChE;IACD;QACE,IAAI,EAAE,WAAW;QACjB,IAAI,EAAE;YACJ,IAAI,EAAE,aAAa;YACnB,IAAI,EAAE,oBAAoB;SAC3B;QACD,OAAO,EAAE;YACP,KAAK,EAAE,wBAAwB;YAC/B,KAAK,EAAE,WAAW,CAAC,WAAW;SAC/B;QACD,eAAe,EAAE,gBAAgB,CAAC,WAAW,CAAC;QAC9C,UAAU,EAAE,CAAC,QAAgC,EAAE,EAAE,CAC/C,mBAAmB,CAAC,QAAQ,EAAE,gBAAgB,CAAC,WAAW,CAAC,CAAC;KAC/D;IACD;QACE,IAAI,EAAE,SAAS;QACf,IAAI,EAAE;YACJ,IAAI,EAAE,YAAY;YAClB,IAAI,EAAE,mBAAmB;SAC1B;QACD,OAAO,EAAE;YACP,KAAK,EAAE,kBAAkB;YACzB,KAAK,EAAE,SAAS;SACjB;QACD,eAAe,EAAE,gBAAgB,CAAC,SAAS,CAAC;QAC5C,UAAU,EAAE,CAAC,QAAgC,EAAE,EAAE,CAC/C,mBAAmB,CAAC,QAAQ,EAAE,gBAAgB,CAAC,SAAS,CAAC,CAAC;KAC7D;IACD;QACE,IAAI,EAAE,SAAS;QACf,IAAI,EAAE;YACJ,IAAI,EAAE,YAAY;YAClB,IAAI,EAAE,mBAAmB;SAC1B;QACD,OAAO,EAAE;YACP,KAAK,EAAE,SAAS;YAChB,KAAK,EAAE,SAAS;SACjB;QACD,eAAe,EAAE,gBAAgB,CAAC,SAAS,CAAC;QAC5C,UAAU,EAAE,CAAC,QAAgC,EAAE,EAAE,CAC/C,mBAAmB,CAAC,QAAQ,EAAE,gBAAgB,CAAC,SAAS,CAAC,CAAC;KAC7D;IACD;QACE,IAAI,EAAE,KAAK;QACX,IAAI,EAAE;YACJ,IAAI,EAAE,YAAY;YAClB,IAAI,EAAE,mBAAmB;SAC1B;QACD,OAAO,EAAE;YACP,KAAK,EAAE,qBAAqB;YAC5B,KAAK,EAAE,SAAS;SACjB;QACD,eAAe,EAAE,gBAAgB,CAAC,KAAK,CAAC;QACxC,UAAU,EAAE,CAAC,QAAgC,EAAE,EAAE,CAC/C,mBAAmB,CAAC,QAAQ,EAAE,gBAAgB,CAAC,KAAK,CAAC,CAAC;KACzD;CACF,CAAC;AAEF,MAAM,sBAAsB,GAAG,CAC7B,UAAgE,EAChE,OAAyB,EACzB,EAAE;IACF,MAAM,cAAc,GAAG,CAAC,EAAE,QAAQ,EAAE,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC;IACjD,MAAM,MAAM,GAAG,YAAY,CAAC,IAAI,CAAC,CAAC,MAAM,EAAE,EAAE,CAAC,MAAM,CAAC,IAAI,KAAK,UAAU,CAAC,CAAC;IACzE,IAAI,MAAM,EAAE;QACV,OAAO,MAAM,CAAC,UAAU,CAAC,cAAc,CAAC,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,MAAM,GAAG,CAAC,CAAC;KACjE;IACD,OAAO,KAAK,CAAC;AACf,CAAC,CAAC;AAEF,MAAM,CAAC,MAAM,WAAW,GAAG,CAAC,OAAY,EAAE,EAAE;IAC1C,IAAI,sBAAsB,CAAC,SAAS,EAAE,OAAO,CAAC,EAAE;QAC9C,OAAO,WAAW,CAAC,cAAc,CAAC;KACnC;SAAM,IAAI,sBAAsB,CAAC,YAAY,EAAE,OAAO,CAAC,EAAE;QACxD,OAAO,WAAW,CAAC,iBAAiB,CAAC;KACtC;SAAM,IAAI,sBAAsB,CAAC,WAAW,EAAE,OAAO,CAAC,EAAE;QACvD,OAAO,WAAW,CAAC,WAAW,CAAC;KAChC;SAAM,IAAI,sBAAsB,CAAC,WAAW,EAAE,OAAO,CAAC,EAAE;QACvD,OAAO,WAAW,CAAC,cAAc,CAAC;KACnC;IACD,OAAO,WAAW,CAAC,WAAW,CAAC;AACjC,CAAC,CAAC;AAEF,eAAe,YAAY,CAAC"}

package/dist/es/loadComponents.d.ts

@@ -1,2 +0,0 @@
-declare const loadComponent: (name: string, elementConstructor: CustomElementConstructor) => void;
-export { loadComponent };

package/dist/es/loadComponents.js

@@ -1,7 +0,0 @@
-const loadComponent = function (name, elementConstructor) {
-    if (!customElements.get(name)) {
-        customElements.define(name, elementConstructor);
-    }
-};
-export { loadComponent };
-//# sourceMappingURL=loadComponents.js.map

package/dist/es/loadComponents.js.map

@@ -1 +0,0 @@
-{"version":3,"file":"loadComponents.js","sourceRoot":"","sources":["../../src/loadComponents.ts"],"names":[],"mappings":"AAAA,MAAM,aAAa,GAAG,UACpB,IAAY,EACZ,kBAA4C;IAE5C,IAAI,CAAC,cAAc,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE;QAC7B,cAAc,CAAC,MAAM,CAAC,IAAI,EAAE,kBAAkB,CAAC,CAAC;KACjD;AACH,CAAC,CAAC;AAEF,OAAO,EAAE,aAAa,EAAE,CAAC"}

package/dist/es/protvista-alphafold-confidence.d.ts

@@ -1,9 +0,0 @@
-import { AlphafoldPayload } from './commonTypes';
-export declare const getConfidenceURLFromPayload: (data: AlphafoldPayload) => string;
-type PartialProtein = {
-    sequence: {
-        sequence: string;
-    };
-};
-export declare const transformData: (data: AlphafoldPayload, protein: PartialProtein) => Promise<string>;
-export {};

package/dist/es/protvista-alphafold-confidence.js.map

@@ -1 +0,0 @@
-{"version":3,"file":"protvista-alphafold-confidence.js","sourceRoot":"","sources":["../../src/protvista-alphafold-confidence.ts"],"names":[],"mappings":"AAQA,MAAM,CAAC,MAAM,2BAA2B,GAAG,CAAC,IAAsB,EAAE,EAAE;;IACpE,MAAM,MAAM,GAAG,MAAA,IAAI,aAAJ,IAAI,uBAAJ,IAAI,CAAG,CAAC,CAAC,0CAAE,MAAM,CAAC;IACjC,OAAO,CAAA,MAAM,aAAN,MAAM,uBAAN,MAAM,CAAE,MAAM;QACnB,CAAC,CAAC,MAAM,CAAC,OAAO,CAAC,QAAQ,EAAE,aAAa,CAAC,CAAC,OAAO,CAAC,MAAM,EAAE,OAAO,CAAC;QAClE,CAAC,CAAC,IAAI,CAAC;AACX,CAAC,CAAC;AAEF,MAAM,cAAc,GAAG,KAAK,EAC1B,GAAW,EAC0B,EAAE;IACvC,IAAI;QACF,MAAM,OAAO,GAAG,MAAM,KAAK,CAAC,GAAG,CAAC,CAAC;QACjC,OAAO,OAAO,CAAC,IAAI,EAAE,CAAC;KACvB;IAAC,OAAO,CAAC,EAAE;QACV,OAAO,CAAC,KAAK,CAAC,qCAAqC,EAAE,CAAC,CAAC,CAAC;KACzD;AACH,CAAC,CAAC;AAQF,MAAM,CAAC,MAAM,aAAa,GAAG,KAAK,EAChC,IAAsB,EACtB,OAAuB,EACvB,EAAE;IACF,MAAM,aAAa,GAAG,2BAA2B,CAAC,IAAI,CAAC,CAAC;IACxD,MAAM,EAAE,eAAe,EAAE,GAAG,CAAA,IAAI,aAAJ,IAAI,uBAAJ,IAAI,CAAG,CAAC,CAAC,KAAI,EAAE,CAAC;IAC5C,IAAI,aAAa,IAAI,eAAe,KAAK,OAAO,CAAC,QAAQ,CAAC,QAAQ,EAAE;QAClE,MAAM,cAAc,GAAG,MAAM,cAAc,CAAC,aAAa,CAAC,CAAC;QAC3D,OAAO,cAAc,aAAd,cAAc,uBAAd,cAAc,CAAE,kBAAkB,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;KACpD;AACH,CAAC,CAAC"}

package/dist/es/protvista-alphamissense-heatmap.d.ts

@@ -1,8 +0,0 @@
-import { AlphafoldPayload } from './commonTypes';
-type PartialProtein = {
-    sequence: {
-        sequence: string;
-    };
-};
-export declare const transformData: (data: AlphafoldPayload, protein: PartialProtein) => Promise<Record<string, string>[]>;
-export {};

package/dist/es/protvista-alphamissense-heatmap.js.map

@@ -1 +0,0 @@
-{"version":3,"file":"protvista-alphamissense-heatmap.js","sourceRoot":"","sources":["../../src/protvista-alphamissense-heatmap.ts"],"names":[],"mappings":"AAAA,OAAO,EACL,YAAY,EACZ,WAAW,GACZ,MAAM,yCAAyC,CAAC;AAGjD,MAAM,QAAQ,GAAG,CAAC,OAAe,EAAiC,EAAE;IAClE,MAAM,IAAI,GAAG,EAAE,CAAC;IAEhB,KAAK,MAAM,CAAC,CAAC,EAAE,GAAG,CAAC,IAAI,OAAO,CAAC,KAAK,CAAC,WAAW,CAAC,CAAC,OAAO,EAAE,EAAE;QAC3D,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,GAAG,EAAE;YACnB,SAAS;SACV;QACD,MAAM,CAAC,EAAE,AAAD,EAAG,cAAc,EAAE,OAAO,EAAE,kBAAkB,CAAC,GACrD,GAAG,CAAC,KAAK,CAAC,YAAY,CAAC,CAAC;QAE1B,IAAI,CAAC,IAAI,CAAC;YACR,MAAM,EAAE,CAAC,cAAc;YACvB,MAAM,EAAE,OAAO;YACf,KAAK,EAAE,CAAC,kBAAkB;SAC3B,CAAC,CAAC;KACJ;IACD,OAAO,IAAI,CAAC;AACd,CAAC,CAAC;AAEF,iBAAiB;AACjB,MAAM,uBAAuB,GAAG,KAAK,EAAE,GAAW,EAA0C,EAAE;IAC5F,IAAI;QACF,MAAM,OAAO,GAAG,MAAM,KAAK,CAAC,GAAG,CAAC,CAAC;QACjC,MAAM,MAAM,GAAG,MAAM,OAAO,CAAC,IAAI,EAAE,CAAC;QACpC,OAAO,QAAQ,CAAC,MAAM,CAAC,CAAC;KACzB;IAAC,OAAO,CAAC,EAAE;QACV,OAAO,CAAC,KAAK,CAAC,4CAA4C,EAAE,CAAC,CAAC,CAAC;KAChE;AACH,CAAC,CAAC;AAQF,MAAM,CAAC,MAAM,aAAa,GAAG,KAAK,EAChC,IAAsB,EACtB,OAAuB,EACvB,EAAE;IACF,MAAM,EAAE,gBAAgB,EAAE,eAAe,EAAE,GAAG,CAAA,IAAI,aAAJ,IAAI,uBAAJ,IAAI,CAAG,CAAC,CAAC,KAAI,EAAE,CAAC;IAC9D,IAAI,gBAAgB,IAAI,eAAe,KAAK,OAAO,CAAC,QAAQ,CAAC,QAAQ,EAAE;QACrE,MAAM,WAAW,GAAG,MAAM,uBAAuB,CAAC,gBAAgB,CAAC,CAAC;QACpE,OAAO,WAAW,CAAC;KACpB;AACH,CAAC,CAAC"}

package/dist/es/protvista-alphamissense-pathogenicity.d.ts

@@ -1,10 +0,0 @@
-import { AlphafoldPayload } from './commonTypes';
-export declare const rowSplitter: RegExp;
-export declare const cellSplitter: RegExp;
-type PartialProtein = {
-    sequence: {
-        sequence: string;
-    };
-};
-export declare const transformData: (data: AlphafoldPayload, protein: PartialProtein) => Promise<string>;
-export {};

package/dist/es/protvista-alphamissense-pathogenicity.js.map

@@ -1 +0,0 @@
-{"version":3,"file":"protvista-alphamissense-pathogenicity.js","sourceRoot":"","sources":["../../src/protvista-alphamissense-pathogenicity.ts"],"names":[],"mappings":"AAEA,oBAAoB;AACpB,oCAAoC;AACpC,8CAA8C;AAC9C,yCAAyC;AACzC,MAAM,MAAM,GAAG,IAAI,CAAC;AACpB,MAAM,UAAU,GAAG,KAAK,CAAC;AAEzB,MAAM,CAAC,MAAM,WAAW,GAAG,UAAU,CAAC;AACtC,MAAM,CAAC,MAAM,YAAY,GAAG,0BAA0B,CAAC;AAUvD,MAAM,QAAQ,GAAG,CAAC,OAAe,EAAU,EAAE;IAC3C,MAAM,SAAS,GAAsB,EAAE,CAAC;IACxC,KAAK,MAAM,CAAC,CAAC,EAAE,GAAG,CAAC,IAAI,OAAO,CAAC,KAAK,CAAC,WAAW,CAAC,CAAC,OAAO,EAAE,EAAE;QAC3D,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,GAAG,EAAE;YACnB,SAAS;SACV;QACD,MAAM,CACJ,AADK,EAEL,QAAQ,EACR,cAAc,EACd,OAAO,EACP,kBAAkB,EAClB,kBAAkB,EACnB,GAAG,GAAG,CAAC,KAAK,CAAC,YAAY,CAAC,CAAC;QAC5B,MAAM,QAAQ,GAAG,CAAC,cAAc,CAAC;QACjC,MAAM,KAAK,GAAG,QAAQ,GAAG,CAAC,CAAC;QAC3B,IAAI,CAAC,SAAS,CAAC,KAAK,CAAC,EAAE;YACrB,SAAS,CAAC,KAAK,CAAC,GAAG,EAAE,CAAC;SACvB;QACD,SAAS,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC;YACpB,QAAQ;YACR,QAAQ;YACR,OAAO;YACP,kBAAkB,EAAE,CAAC,kBAAkB;YACvC,kBAAkB;SACnB,CAAC,CAAC;KACJ;IAED,MAAM,GAAG,GAAG,EAAE,CAAC;IACf,KAAK,MAAM,QAAQ,IAAI,SAAS,EAAE;QAChC,IAAI,MAAM,GAAG,GAAG,CAAC;QACjB,UAAU;QACV,0BAA0B;QAC1B,iEAAiE;QACjE,KAAK;QACL,UAAU;QACV,MAAM,KAAK,GACT,QAAQ,CAAC,MAAM,CACb,CAAC,GAAG,EAAE,SAAS,EAAE,EAAE,CAAC,GAAG,GAAG,CAAC,SAAS,CAAC,kBAAkB,EACvD,CAAC,CACF,GAAG,QAAQ,CAAC,MAAM,CAAC;QACtB,IAAI,KAAK,GAAG,UAAU,EAAE;YACtB,MAAM,GAAG,GAAG,CAAC;SACd;aAAM,IAAI,KAAK,GAAG,MAAM,EAAE;YACzB,MAAM,GAAG,GAAG,CAAC;SACd;QACD,GAAG,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC;KAClB;IAED,OAAO,GAAG,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;AACtB,CAAC,CAAC;AAEF,iBAAiB;AACjB,MAAM,uBAAuB,GAAG,KAAK,EAAE,GAAW,EAAmB,EAAE;IACrE,IAAI;QACF,MAAM,OAAO,GAAG,MAAM,KAAK,CAAC,GAAG,CAAC,CAAC;QACjC,MAAM,MAAM,GAAG,MAAM,OAAO,CAAC,IAAI,EAAE,CAAC;QACpC,OAAO,QAAQ,CAAC,MAAM,CAAC,CAAC;KACzB;IAAC,OAAO,CAAC,EAAE;QACV,OAAO,CAAC,KAAK,CAAC,4CAA4C,EAAE,CAAC,CAAC,CAAC;KAChE;AACH,CAAC,CAAC;AAQF,MAAM,CAAC,MAAM,aAAa,GAAG,KAAK,EAChC,IAAsB,EACtB,OAAuB,EACvB,EAAE;IACF,MAAM,EAAE,gBAAgB,EAAE,eAAe,EAAE,GAAG,CAAA,IAAI,aAAJ,IAAI,uBAAJ,IAAI,CAAG,CAAC,CAAC,KAAI,EAAE,CAAC;IAC9D,IAAI,gBAAgB,IAAI,eAAe,KAAK,OAAO,CAAC,QAAQ,CAAC,QAAQ,EAAE;QACrE,MAAM,aAAa,GAAG,MAAM,uBAAuB,CAAC,gBAAgB,CAAC,CAAC;QACtE,sDAAsD;QACtD,OAAO,aAAa,CAAC;KACtB;AACH,CAAC,CAAC"}

package/dist/es/protvista-ptm-exchange.js.map

@@ -1 +0,0 @@
-{"version":3,"file":"protvista-ptm-exchange.js","sourceRoot":"","sources":["../../src/protvista-ptm-exchange.ts"],"names":[],"mappings":"AAgDA,IAAK,qBAIJ;AAJD,WAAK,qBAAqB;IACxB,yCAAgB,CAAA;IAChB,2CAAkB,CAAA;IAClB,2CAAkB,CAAA;AACpB,CAAC,EAJI,qBAAqB,KAArB,qBAAqB,QAIzB;AAED,MAAM,kBAAkB,GAAG;IACzB,CAAC,EAAE,iBAAiB;IACpB,CAAC,EAAE,iBAAiB;IACpB,CAAC,EAAE,kBAAkB;IACrB,CAAC,EAAE,eAAe;IAClB,CAAC,EAAE,kBAAkB;IACrB,CAAC,EAAE,iBAAiB;CACrB,CAAC;AAEF,MAAM,aAAa,GAAG,CAAC,EAAU,EAAE,EAAE;IACnC,MAAM,EAAE,GAAG,EAAE,CAAC,WAAW,EAAE,CAAC;IAC5B,IAAI,EAAE,IAAI,kBAAkB,EAAE;QAC5B,OAAO,kBAAkB,CAAC,EAAqC,CAAC,CAAC;KAClE;IACD,OAAO,CAAC,KAAK,CAAC,GAAG,EAAE,6CAA6C,CAAC,CAAC;IAClE,OAAO,EAAE,CAAC;AACZ,CAAC,CAAC;AAEF,MAAM,sBAAsB,GAAG,CAC7B,IAAW,EACX,EAAU,EACV,gBAAwB,EACxB,EAAE;IACF,MAAM,SAAS,GAAG;QAChB,GAAG,IAAI,CAAC,OAAO,CAAC,CAAC,EAAE,YAAY,EAAE,EAAE,EAAE,CACnC,YAAY,aAAZ,YAAY,uBAAZ,YAAY,CAAE,OAAO,CAAC,CAAC,EAAE,EAAE,EAAE,EAAE,EAAE,CAAC,CAAC,EAAE,CAAC,CAAC,CACxC;KACF,CAAC;IACF,MAAM,gBAAgB,GAAG,IAAI,GAAG,CAC9B,IAAI,CAAC,OAAO,CAAC,CAAC,EAAE,YAAY,EAAE,EAAE,EAAE,CAChC,YAAY,aAAZ,YAAY,uBAAZ,YAAY,CAAE,GAAG,CAAC,CAAC,EAAE,UAAU,EAAE,EAAE,EAAE,CAAC,UAAU,CAAC,kBAAkB,CAAC,CAAC,CACtE,CACF,CAAC;IACF,IAAI,eAAuB,CAAC;IAE5B,IAAI,CAAC,gBAAgB,CAAC,IAAI,EAAE;QAC1B,OAAO,CAAC,GAAG,CAAC,6BAA6B,CAAC,CAAC;KAC5C;SAAM,IAAI,gBAAgB,CAAC,IAAI,GAAG,CAAC,EAAE;QACpC,OAAO,CAAC,KAAK,CACX,2CAA2C,KAAK,CAAC,IAAI,CAAC,gBAAgB,CAAC,EAAE,CAC1E,CAAC;KACH;SAAM;QACL,CAAC,eAAe,CAAC,GAAG,gBAAgB,CAAC;KACtC;IAED,MAAM,OAAO,GAAG;2BACS,aAAa,CAAC,EAAE,CAAC;IAExC,eAAe;QACb,CAAC,CAAC,sFAAsF,eAAe,MAAM;QAC7G,CAAC,CAAC,EACN;IAEE,SAAS;QACP,CAAC,CAAC,wBAAwB,SAAS;aAC9B,GAAG,CAAC,CAAC,EAAE,EAAE,EAAE;YACV,MAAM,SAAS,GAAG,EAAE,KAAK,cAAc,CAAC,CAAC,CAAC,WAAW,CAAC,CAAC,CAAC,EAAE,CAAC;YAC3D,OAAO,cAAc,SAAS,+BAA+B,SAAS;8EACJ,SAAS;;gBAGvE,EAAE,KAAK,cAAc;gBACnB,CAAC,CAAC,2LAA2L;gBAC7L,CAAC,CAAC,EACN;eACC,CAAC;QACN,CAAC,CAAC;aACD,IAAI,CAAC,EAAE,CAAC,OAAO;QACpB,CAAC,CAAC,EACN;GACC,CAAC;IAEF,OAAO;QACL,MAAM,EAAE,aAAa;QACrB,IAAI,EAAE,YAAY;QAClB,KAAK,EAAE,gBAAgB;QACvB,GAAG,EAAE,gBAAgB;QACrB,KAAK,EAAE,UAAU;QACjB,cAAc,EAAE,OAAO;QACvB,KAAK,EAAE,qBAAqB,CAAC,eAAe,CAAC,IAAI,OAAO;KACzD,CAAC;AACJ,CAAC,CAAC;AAEF,MAAM,CAAC,MAAM,aAAa,GAAG,CAAC,IAAmB,EAAE,EAAE;IACnD,IAAI,IAAI,EAAE;QACR,MAAM,EAAE,QAAQ,EAAE,GAAG,IAAI,CAAC;QAE1B,MAAM,sBAAsB,GAC1B,EAAE,CAAC;QAEL,IAAI,QAAQ,EAAE;YACZ,KAAK,MAAM,OAAO,IAAI,QAAQ,EAAE;gBAC9B,KAAK,MAAM,GAAG,IAAI,OAAO,CAAC,IAAI,EAAE;oBAC9B,MAAM,gBAAgB,GAAG,CAAC,OAAO,CAAC,KAAK,GAAG,GAAG,CAAC,QAAQ,GAAG,CAAC,CAAC;oBAC3D,IAAI,CAAC,MAAM,CAAC,QAAQ,CAAC,gBAAgB,CAAC,EAAE;wBACtC,OAAO,CAAC,KAAK,CACX,oEAAoE,CAAC,OAAO,CAAC,KAAK,MAChF,GAAG,CAAC,QACN,MAAM,CACP,CAAC;wBACF,uCAAuC;wBACvC,SAAS;qBACV;oBACD,MAAM,EAAE,GAAG,OAAO,CAAC,OAAO,CAAC,GAAG,CAAC,QAAQ,GAAG,CAAC,CAAC,CAAC;oBAC7C,IAAI,gBAAgB,IAAI,sBAAsB,EAAE;wBAC9C,IAAI,sBAAsB,CAAC,gBAAgB,CAAC,CAAC,EAAE,KAAK,EAAE,EAAE;4BACtD,OAAO,CAAC,KAAK,CACX,6CAA6C,sBAAsB,CAAC,gBAAgB,CAAC,CAAC,EAAE,KAAK,EAAE,GAAG,CACnG,CAAC;yBACH;6BAAM;4BACL,sBAAsB,CAAC,gBAAgB,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;yBACzD;qBACF;yBAAM;wBACL,sBAAsB,CAAC,gBAAgB,CAAC,GAAG,EAAE,IAAI,EAAE,CAAC,GAAG,CAAC,EAAE,EAAE,EAAE,CAAC;qBAChE;iBACF;aACF;YAED,OAAO,MAAM,CAAC,OAAO,CAAC,sBAAsB,CAAC,CAAC,GAAG,CAC/C,CAAC,CAAC,gBAAgB,EAAE,EAAE,IAAI,EAAE,EAAE,EAAE,CAAC,EAAE,EAAE,CACnC,sBAAsB,CAAC,IAAI,EAAE,EAAE,EAAE,CAAC,gBAAgB,CAAC,CACtD,CAAC;SACH;KACF;IACD,OAAO,EAAE,CAAC;AACZ,CAAC,CAAC"}

package/dist/es/protvista-variation-graph-adapter.js.map

@@ -1 +0,0 @@
-{"version":3,"file":"protvista-variation-graph-adapter.js","sourceRoot":"","sources":["../../src/protvista-variation-graph-adapter.ts"],"names":[],"mappings":"AAAA,MAAM,CAAC,MAAM,aAAa,GAAG,CAAC,IAAI,EAAE,EAAE;IACpC,IAAI,IAAI,CAAC,QAAQ,IAAI,IAAI,CAAC,QAAQ,CAAC,MAAM,EAAE;QACzC,MAAM,QAAQ,GAAG,IAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,OAAO,EAAE,EAAE;;YAAC,OAAA,CAAC;gBAC7C,GAAG,OAAO;gBACV,SAAS,EAAE,MAAA,OAAO,CAAC,eAAe,0CAAE,IAAI,CAAC,IAAI,CAAC;gBAC9C,KAAK,EAAE,OAAO,CAAC,KAAK;aACrB,CAAC,CAAA;SAAA,CAAC,CAAC;QAEN,MAAM,KAAK,GAAG,IAAI,iBAAiB,CAAC,IAAI,CAAC,QAAQ,CAAC,MAAM,CAAC,CAAC;QAC1D,MAAM,YAAY,GAAG,IAAI,iBAAiB,CAAC,IAAI,CAAC,QAAQ,CAAC,MAAM,CAAC,CAAC;QAEjE,KAAK,MAAM,EAAE,KAAK,EAAE,WAAW,EAAE,IAAI,QAAQ,EAAE;YAC7C,MAAM,KAAK,GAAG,CAAC,KAAK,CAAC;YACrB,2CAA2C;YAC3C,uCAAuC;YACvC,IAAI,KAAK,GAAG,CAAC,IAAI,KAAK,GAAG,IAAI,CAAC,QAAQ,CAAC,MAAM;gBAAE,SAAS;YAExD,uCAAuC;YACvC,KAAK,CAAC,KAAK,CAAC,EAAE,CAAC;YAEf,uCAAuC;YACvC,IAAI,CAAC,WAAW;gBAAE,SAAS;YAC3B,MAAM,UAAU,GAAG,WAAW,CAAC,IAAI,CACjC,CAAC,WAAW,EAAE,EAAE,CAAC,WAAW,CAAC,OAAO,KAAK,IAAI,CAC9C,CAAC;YACF,uCAAuC;YACvC,IAAI,UAAU;gBAAE,YAAY,CAAC,KAAK,CAAC,EAAE,CAAC;SACvC;QAED,MAAM,SAAS,GAAG;YACd;gBACE,IAAI,EAAE,SAAS;gBACf,KAAK,EAAE,CAAC,CAAC,EAAE,IAAI,CAAC,GAAG,CAAC,IAAI,CAAC,GAAG,CAAC,GAAG,KAAK,CAAC,EAAE,IAAI,CAAC,GAAG,CAAC,GAAG,YAAY,CAAC,CAAC,CAAC;gBACnE,KAAK,EAAE,UAAU;gBACjB,MAAM,EAAE,CAAC,GAAG,KAAK,CAAC,CAAC,GAAG,CAAC,CAAC,KAAK,EAAE,KAAK,EAAE,EAAE,CAAC,CAAC,EAAE,QAAQ,EAAE,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,CAAC,CAAC;aAC9E;YACD;gBACE,IAAI,EAAE,yBAAyB;gBAC/B,KAAK,EAAE,CAAC,CAAC,EAAE,IAAI,CAAC,GAAG,CAAC,IAAI,CAAC,GAAG,CAAC,GAAG,KAAK,CAAC,EAAE,IAAI,CAAC,GAAG,CAAC,GAAG,YAAY,CAAC,CAAC,CAAC;gBACnE,KAAK,EAAE,KAAK;gBACZ,MAAM,EAAE,CAAC,GAAG,YAAY,CAAC,CAAC,GAAG,CAAC,CAAC,KAAK,EAAE,KAAK,EAAE,EAAE,CAAC,CAAC,EAAE,QAAQ,EAAE,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,CAAC,CAAC;aACrF;SACF,CAAC;QACJ,OAAO,SAAS,CAAC;KAClB;AACH,CAAC,CAAC"}

package/src/loadComponents.ts

@@ -1,10 +0,0 @@
-const loadComponent = function (
-  name: string,
-  elementConstructor: CustomElementConstructor
-) {
-  if (!customElements.get(name)) {
-    customElements.define(name, elementConstructor);
-  }
-};
-
-export { loadComponent };

package/src/types/nightingale-components.d.ts

@@ -1,13 +0,0 @@
-export type NightingaleEvent = Event & {
-  detail?: {
-    displaystart?: number;
-    displayend?: number;
-    eventType?: "click" | "mouseover" | "mouseout" | "reset";
-    feature?: any;
-    coords?: [number, number];
-  };
-};
-
-type NightingaleDataAdapter = {
-  transformData;
-};

package/src/types/nightingale-sequence-heatmap.d.ts

@@ -1 +0,0 @@
-declare module '@nightingale-elements/nightingale-sequence-heatmap';

package/src/types/protvista-feature-adapter.d.ts

@@ -1 +0,0 @@
-declare module 'protvista-feature-adapter';

package/src/types/protvista-interpro-adapter.d.ts

@@ -1 +0,0 @@
-declare module 'protvista-interpro-adapter';

package/src/types/protvista-proteomics-adapter.d.ts

@@ -1 +0,0 @@
-declare module 'protvista-proteomics-adapter';

package/src/types/protvista-structure-adapter.d.ts

@@ -1 +0,0 @@
-declare module 'protvista-structure-adapter';

package/src/types/protvista-structure.d.ts

@@ -1 +0,0 @@
-declare module 'protvista-structure';

package/src/types/protvista-variation.d.ts

@@ -1,15 +0,0 @@
-declare module 'protvista-variation';
-
-type ProtvistaVariant =
-  import('protvista-variation-adapter/dist/es/variants').Variant & {
-    hasPredictions?: boolean;
-    xrefNames?: string[];
-  };
-
-type ProtvistaVariationData = {
-  variants: ProtvistaVariant[];
-}[];
-
-declare class ProtvistaVariation extends HTMLElement {
-  colorConfig: (variant: any) => string;
-}