phenoml 17.7.0 → 17.9.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (467) hide show
  1. package/dist/cjs/BaseClient.d.ts +12 -0
  2. package/dist/cjs/BaseClient.js +2 -2
  3. package/dist/cjs/Client.d.ts +6 -0
  4. package/dist/cjs/Client.js +20 -10
  5. package/dist/cjs/api/resources/agent/client/Client.js +4 -3
  6. package/dist/cjs/api/resources/agent/errors/BadRequestError.js +1 -1
  7. package/dist/cjs/api/resources/agent/errors/ConflictError.js +1 -1
  8. package/dist/cjs/api/resources/agent/errors/ForbiddenError.js +1 -1
  9. package/dist/cjs/api/resources/agent/errors/GatewayTimeoutError.js +1 -1
  10. package/dist/cjs/api/resources/agent/errors/InternalServerError.js +1 -1
  11. package/dist/cjs/api/resources/agent/errors/NotFoundError.js +1 -1
  12. package/dist/cjs/api/resources/agent/errors/UnauthorizedError.js +1 -1
  13. package/dist/cjs/api/resources/agent/resources/chat/client/Client.js +3 -2
  14. package/dist/cjs/api/resources/agent/resources/prompts/client/Client.js +4 -3
  15. package/dist/cjs/api/resources/authtoken/client/Client.js +2 -1
  16. package/dist/cjs/api/resources/authtoken/errors/BadRequestError.js +1 -1
  17. package/dist/cjs/api/resources/authtoken/errors/InternalServerError.js +1 -1
  18. package/dist/cjs/api/resources/authtoken/errors/UnauthorizedError.js +1 -1
  19. package/dist/cjs/api/resources/cohort/client/Client.js +2 -1
  20. package/dist/cjs/api/resources/cohort/errors/BadRequestError.js +1 -1
  21. package/dist/cjs/api/resources/cohort/errors/InternalServerError.js +1 -1
  22. package/dist/cjs/api/resources/cohort/errors/UnauthorizedError.js +1 -1
  23. package/dist/cjs/api/resources/construe/client/Client.js +2 -1
  24. package/dist/cjs/api/resources/construe/errors/BadRequestError.js +1 -1
  25. package/dist/cjs/api/resources/construe/errors/ConflictError.js +1 -1
  26. package/dist/cjs/api/resources/construe/errors/FailedDependencyError.js +1 -1
  27. package/dist/cjs/api/resources/construe/errors/ForbiddenError.js +1 -1
  28. package/dist/cjs/api/resources/construe/errors/GatewayTimeoutError.js +1 -1
  29. package/dist/cjs/api/resources/construe/errors/InternalServerError.js +1 -1
  30. package/dist/cjs/api/resources/construe/errors/NotFoundError.js +1 -1
  31. package/dist/cjs/api/resources/construe/errors/NotImplementedError.js +1 -1
  32. package/dist/cjs/api/resources/construe/errors/ServiceUnavailableError.js +1 -1
  33. package/dist/cjs/api/resources/construe/errors/UnauthorizedError.js +1 -1
  34. package/dist/cjs/api/resources/construe/resources/codeSystems/client/Client.js +2 -1
  35. package/dist/cjs/api/resources/construe/resources/codeSystems/client/requests/DeleteRequest.d.ts +1 -1
  36. package/dist/cjs/api/resources/construe/resources/codeSystems/client/requests/ExportRequest.d.ts +1 -1
  37. package/dist/cjs/api/resources/construe/resources/codeSystems/client/requests/FindRequest.d.ts +1 -1
  38. package/dist/cjs/api/resources/construe/resources/codes/client/Client.d.ts +47 -0
  39. package/dist/cjs/api/resources/construe/resources/codes/client/Client.js +97 -1
  40. package/dist/cjs/api/resources/construe/resources/codes/client/requests/CodesListRequest.d.ts +1 -1
  41. package/dist/cjs/api/resources/construe/resources/codes/client/requests/ExtractRequest.d.ts +12 -0
  42. package/dist/cjs/api/resources/construe/resources/codes/client/requests/LookupRequest.d.ts +1 -1
  43. package/dist/cjs/api/resources/construe/resources/codes/client/requests/PhenoCrRequest.d.ts +16 -0
  44. package/dist/cjs/api/resources/construe/resources/codes/client/requests/SearchSemanticRequest.d.ts +1 -1
  45. package/dist/cjs/api/resources/construe/resources/codes/client/requests/SearchTextRequest.d.ts +1 -1
  46. package/dist/cjs/api/resources/construe/resources/codes/client/requests/index.d.ts +1 -0
  47. package/dist/cjs/api/resources/construe/types/ExtractRequestSystem.d.ts +11 -8
  48. package/dist/cjs/api/resources/construe/types/PhenocrExtractRequestSystem.d.ts +6 -0
  49. package/dist/cjs/api/resources/construe/types/PhenocrExtractRequestSystem.js +3 -0
  50. package/dist/cjs/api/resources/construe/types/index.d.ts +1 -0
  51. package/dist/cjs/api/resources/construe/types/index.js +1 -0
  52. package/dist/cjs/api/resources/fhir/client/Client.js +5 -4
  53. package/dist/cjs/api/resources/fhir2Omop/client/Client.js +2 -1
  54. package/dist/cjs/api/resources/fhir2Omop/errors/BadRequestError.js +1 -1
  55. package/dist/cjs/api/resources/fhir2Omop/errors/InternalServerError.js +1 -1
  56. package/dist/cjs/api/resources/fhir2Omop/errors/ServiceUnavailableError.js +1 -1
  57. package/dist/cjs/api/resources/fhir2Omop/errors/UnauthorizedError.js +1 -1
  58. package/dist/cjs/api/resources/fhir2Omop/types/CareSiteRow.d.ts +8 -0
  59. package/dist/cjs/api/resources/fhir2Omop/types/CareSiteRow.js +3 -0
  60. package/dist/cjs/api/resources/fhir2Omop/types/ConditionOccurrenceRow.d.ts +1 -0
  61. package/dist/cjs/api/resources/fhir2Omop/types/DeathRow.d.ts +9 -0
  62. package/dist/cjs/api/resources/fhir2Omop/types/DeathRow.js +3 -0
  63. package/dist/cjs/api/resources/fhir2Omop/types/DrugExposureRow.d.ts +1 -0
  64. package/dist/cjs/api/resources/fhir2Omop/types/LocationRow.d.ts +14 -0
  65. package/dist/cjs/api/resources/fhir2Omop/types/LocationRow.js +3 -0
  66. package/dist/cjs/api/resources/fhir2Omop/types/MeasurementRow.d.ts +1 -0
  67. package/dist/cjs/api/resources/fhir2Omop/types/ObservationPeriodRow.d.ts +7 -0
  68. package/dist/cjs/api/resources/fhir2Omop/types/ObservationPeriodRow.js +3 -0
  69. package/dist/cjs/api/resources/fhir2Omop/types/ObservationRow.d.ts +1 -0
  70. package/dist/cjs/api/resources/fhir2Omop/types/OmopTables.d.ts +5 -0
  71. package/dist/cjs/api/resources/fhir2Omop/types/PersonRow.d.ts +1 -0
  72. package/dist/cjs/api/resources/fhir2Omop/types/ProcedureOccurrenceRow.d.ts +1 -0
  73. package/dist/cjs/api/resources/fhir2Omop/types/ProviderRow.d.ts +15 -0
  74. package/dist/cjs/api/resources/fhir2Omop/types/ProviderRow.js +3 -0
  75. package/dist/cjs/api/resources/fhir2Omop/types/VisitOccurrenceRow.d.ts +2 -0
  76. package/dist/cjs/api/resources/fhir2Omop/types/index.d.ts +5 -0
  77. package/dist/cjs/api/resources/fhir2Omop/types/index.js +5 -0
  78. package/dist/cjs/api/resources/fhirProvider/client/Client.js +2 -1
  79. package/dist/cjs/api/resources/fhirProvider/errors/BadRequestError.js +1 -1
  80. package/dist/cjs/api/resources/fhirProvider/errors/ForbiddenError.js +1 -1
  81. package/dist/cjs/api/resources/fhirProvider/errors/InternalServerError.js +1 -1
  82. package/dist/cjs/api/resources/fhirProvider/errors/NotFoundError.js +1 -1
  83. package/dist/cjs/api/resources/fhirProvider/errors/UnauthorizedError.js +1 -1
  84. package/dist/cjs/api/resources/fhirProvider/resources/authConfig/client/Client.js +4 -3
  85. package/dist/cjs/api/resources/implementationGuides/client/Client.d.ts +12 -0
  86. package/dist/cjs/api/resources/implementationGuides/client/Client.js +16 -0
  87. package/dist/cjs/api/resources/implementationGuides/client/index.d.ts +1 -0
  88. package/dist/cjs/api/resources/implementationGuides/client/index.js +2 -0
  89. package/dist/cjs/api/resources/implementationGuides/errors/BadRequestError.d.ts +5 -0
  90. package/dist/cjs/api/resources/implementationGuides/errors/BadRequestError.js +54 -0
  91. package/dist/cjs/api/resources/implementationGuides/errors/ForbiddenError.d.ts +5 -0
  92. package/dist/cjs/api/resources/implementationGuides/errors/ForbiddenError.js +54 -0
  93. package/dist/cjs/api/resources/implementationGuides/errors/InternalServerError.d.ts +5 -0
  94. package/dist/cjs/api/resources/implementationGuides/errors/InternalServerError.js +54 -0
  95. package/dist/cjs/api/resources/implementationGuides/errors/NotFoundError.d.ts +5 -0
  96. package/dist/cjs/api/resources/implementationGuides/errors/NotFoundError.js +54 -0
  97. package/dist/cjs/api/resources/implementationGuides/errors/UnauthorizedError.d.ts +5 -0
  98. package/dist/cjs/api/resources/implementationGuides/errors/UnauthorizedError.js +54 -0
  99. package/dist/cjs/api/resources/implementationGuides/errors/index.d.ts +5 -0
  100. package/dist/cjs/api/resources/implementationGuides/errors/index.js +21 -0
  101. package/dist/cjs/api/resources/implementationGuides/exports.d.ts +3 -0
  102. package/dist/cjs/api/resources/implementationGuides/exports.js +22 -0
  103. package/dist/cjs/api/resources/implementationGuides/index.d.ts +4 -0
  104. package/dist/cjs/api/resources/implementationGuides/index.js +20 -0
  105. package/dist/cjs/api/resources/implementationGuides/resources/implementationGuides/client/Client.d.ts +91 -0
  106. package/dist/cjs/api/resources/implementationGuides/resources/implementationGuides/client/Client.js +316 -0
  107. package/dist/cjs/api/resources/implementationGuides/resources/implementationGuides/client/index.d.ts +1 -0
  108. package/dist/cjs/api/resources/implementationGuides/resources/implementationGuides/client/index.js +17 -0
  109. package/dist/cjs/api/resources/implementationGuides/resources/implementationGuides/client/requests/UpdateImplementationGuideRequest.d.ts +8 -0
  110. package/dist/cjs/api/resources/implementationGuides/resources/implementationGuides/client/requests/UpdateImplementationGuideRequest.js +3 -0
  111. package/dist/cjs/api/resources/implementationGuides/resources/implementationGuides/client/requests/index.d.ts +1 -0
  112. package/dist/cjs/api/resources/implementationGuides/resources/implementationGuides/client/requests/index.js +2 -0
  113. package/dist/cjs/api/resources/implementationGuides/resources/implementationGuides/exports.d.ts +2 -0
  114. package/dist/cjs/api/resources/implementationGuides/resources/implementationGuides/exports.js +21 -0
  115. package/dist/cjs/api/resources/implementationGuides/resources/implementationGuides/index.d.ts +1 -0
  116. package/dist/cjs/api/resources/implementationGuides/resources/implementationGuides/index.js +17 -0
  117. package/dist/cjs/api/resources/implementationGuides/resources/index.d.ts +2 -0
  118. package/dist/cjs/api/resources/implementationGuides/resources/index.js +41 -0
  119. package/dist/cjs/api/resources/implementationGuides/types/ImplementationGuideDetail.d.ts +5 -0
  120. package/dist/cjs/api/resources/implementationGuides/types/ImplementationGuideDetail.js +3 -0
  121. package/dist/cjs/api/resources/implementationGuides/types/ImplementationGuideListResponse.d.ts +4 -0
  122. package/dist/cjs/api/resources/implementationGuides/types/ImplementationGuideListResponse.js +3 -0
  123. package/dist/cjs/api/resources/implementationGuides/types/ImplementationGuideSummary.d.ts +15 -0
  124. package/dist/cjs/api/resources/implementationGuides/types/ImplementationGuideSummary.js +3 -0
  125. package/dist/cjs/api/resources/implementationGuides/types/index.d.ts +3 -0
  126. package/dist/cjs/api/resources/implementationGuides/types/index.js +19 -0
  127. package/dist/cjs/api/resources/index.d.ts +2 -0
  128. package/dist/cjs/api/resources/index.js +3 -1
  129. package/dist/cjs/api/resources/lang2Fhir/client/Client.d.ts +8 -0
  130. package/dist/cjs/api/resources/lang2Fhir/client/Client.js +15 -6
  131. package/dist/cjs/api/resources/lang2Fhir/client/requests/index.d.ts +0 -1
  132. package/dist/cjs/api/resources/lang2Fhir/errors/BadRequestError.js +1 -1
  133. package/dist/cjs/api/resources/lang2Fhir/errors/ClientClosedRequestError.js +1 -1
  134. package/dist/cjs/api/resources/lang2Fhir/errors/ForbiddenError.js +1 -1
  135. package/dist/cjs/api/resources/lang2Fhir/errors/GatewayTimeoutError.js +1 -1
  136. package/dist/cjs/api/resources/lang2Fhir/errors/InternalServerError.js +1 -1
  137. package/dist/cjs/api/resources/lang2Fhir/errors/NotFoundError.js +1 -1
  138. package/dist/cjs/api/resources/lang2Fhir/errors/UnauthorizedError.js +1 -1
  139. package/dist/cjs/api/resources/lang2Fhir/errors/UnprocessableEntityError.js +1 -1
  140. package/dist/cjs/api/resources/lang2Fhir/types/CreateMultiResponse.d.ts +2 -0
  141. package/dist/cjs/api/resources/lang2Fhir/{client/requests → types}/ProfileUploadRequest.d.ts +2 -10
  142. package/dist/cjs/api/resources/lang2Fhir/types/ProfileUploadRequest.js +3 -0
  143. package/dist/cjs/api/resources/lang2Fhir/types/index.d.ts +1 -0
  144. package/dist/cjs/api/resources/lang2Fhir/types/index.js +1 -0
  145. package/dist/cjs/api/resources/profiles/client/Client.d.ts +12 -0
  146. package/dist/cjs/api/resources/profiles/client/Client.js +16 -0
  147. package/dist/cjs/api/resources/profiles/client/index.d.ts +1 -0
  148. package/dist/cjs/api/resources/profiles/client/index.js +2 -0
  149. package/dist/cjs/api/resources/profiles/errors/BadRequestError.d.ts +5 -0
  150. package/dist/cjs/api/resources/profiles/errors/BadRequestError.js +54 -0
  151. package/dist/cjs/api/resources/profiles/errors/ForbiddenError.d.ts +5 -0
  152. package/dist/cjs/api/resources/profiles/errors/ForbiddenError.js +54 -0
  153. package/dist/cjs/api/resources/profiles/errors/InternalServerError.d.ts +5 -0
  154. package/dist/cjs/api/resources/profiles/errors/InternalServerError.js +54 -0
  155. package/dist/cjs/api/resources/profiles/errors/NotFoundError.d.ts +5 -0
  156. package/dist/cjs/api/resources/profiles/errors/NotFoundError.js +54 -0
  157. package/dist/cjs/api/resources/profiles/errors/UnauthorizedError.d.ts +5 -0
  158. package/dist/cjs/api/resources/profiles/errors/UnauthorizedError.js +54 -0
  159. package/dist/cjs/api/resources/profiles/errors/index.d.ts +5 -0
  160. package/dist/cjs/api/resources/profiles/errors/index.js +21 -0
  161. package/dist/cjs/api/resources/profiles/exports.d.ts +3 -0
  162. package/dist/cjs/api/resources/profiles/exports.js +22 -0
  163. package/dist/cjs/api/resources/profiles/index.d.ts +4 -0
  164. package/dist/cjs/api/resources/profiles/index.js +20 -0
  165. package/dist/cjs/api/resources/profiles/resources/index.d.ts +2 -0
  166. package/dist/cjs/api/resources/profiles/resources/index.js +41 -0
  167. package/dist/cjs/api/resources/profiles/resources/profiles/client/Client.d.ts +127 -0
  168. package/dist/cjs/api/resources/profiles/resources/profiles/client/Client.js +397 -0
  169. package/dist/cjs/api/resources/profiles/resources/profiles/client/index.d.ts +1 -0
  170. package/dist/cjs/api/resources/profiles/resources/profiles/client/index.js +17 -0
  171. package/dist/cjs/api/resources/profiles/resources/profiles/client/requests/ListRequest.d.ts +10 -0
  172. package/dist/cjs/api/resources/profiles/resources/profiles/client/requests/ListRequest.js +3 -0
  173. package/dist/cjs/api/resources/profiles/resources/profiles/client/requests/index.d.ts +1 -0
  174. package/dist/cjs/api/resources/profiles/resources/profiles/client/requests/index.js +2 -0
  175. package/dist/cjs/api/resources/profiles/resources/profiles/exports.d.ts +2 -0
  176. package/dist/cjs/api/resources/profiles/resources/profiles/exports.js +21 -0
  177. package/dist/cjs/api/resources/profiles/resources/profiles/index.d.ts +1 -0
  178. package/dist/cjs/api/resources/profiles/resources/profiles/index.js +17 -0
  179. package/dist/cjs/api/resources/profiles/types/FhirResource.d.ts +4 -0
  180. package/dist/cjs/api/resources/profiles/types/FhirResource.js +3 -0
  181. package/dist/cjs/api/resources/profiles/types/ProfileGetResponse.d.ts +5 -0
  182. package/dist/cjs/api/resources/profiles/types/ProfileGetResponse.js +3 -0
  183. package/dist/cjs/api/resources/profiles/types/ProfileListResponse.d.ts +4 -0
  184. package/dist/cjs/api/resources/profiles/types/ProfileListResponse.js +3 -0
  185. package/dist/cjs/api/resources/profiles/types/ProfileSummary.d.ts +26 -0
  186. package/dist/cjs/api/resources/profiles/types/ProfileSummary.js +12 -0
  187. package/dist/cjs/api/resources/profiles/types/ProfileUploadRequest.d.ts +7 -0
  188. package/dist/cjs/api/resources/profiles/types/ProfileUploadRequest.js +3 -0
  189. package/dist/cjs/api/resources/profiles/types/index.d.ts +5 -0
  190. package/dist/cjs/api/resources/profiles/types/index.js +21 -0
  191. package/dist/cjs/api/resources/summary/client/Client.js +2 -1
  192. package/dist/cjs/api/resources/summary/errors/BadRequestError.js +1 -1
  193. package/dist/cjs/api/resources/summary/errors/ForbiddenError.js +1 -1
  194. package/dist/cjs/api/resources/summary/errors/InternalServerError.js +1 -1
  195. package/dist/cjs/api/resources/summary/errors/NotFoundError.js +1 -1
  196. package/dist/cjs/api/resources/summary/errors/UnauthorizedError.js +1 -1
  197. package/dist/cjs/api/resources/summary/resources/templates/client/Client.js +3 -2
  198. package/dist/cjs/api/resources/tools/client/Client.js +5 -4
  199. package/dist/cjs/api/resources/tools/errors/BadRequestError.js +1 -1
  200. package/dist/cjs/api/resources/tools/errors/ForbiddenError.js +1 -1
  201. package/dist/cjs/api/resources/tools/errors/InternalServerError.js +1 -1
  202. package/dist/cjs/api/resources/tools/errors/NotFoundError.js +1 -1
  203. package/dist/cjs/api/resources/tools/errors/UnauthorizedError.js +1 -1
  204. package/dist/cjs/api/resources/tools/resources/mcpServers/client/Client.js +2 -1
  205. package/dist/cjs/api/resources/voice/errors/BadGatewayError.js +1 -1
  206. package/dist/cjs/api/resources/voice/errors/BadRequestError.js +1 -1
  207. package/dist/cjs/api/resources/voice/errors/ContentTooLargeError.js +1 -1
  208. package/dist/cjs/api/resources/voice/errors/GatewayTimeoutError.js +1 -1
  209. package/dist/cjs/api/resources/voice/errors/PaymentRequiredError.js +1 -1
  210. package/dist/cjs/api/resources/voice/errors/ServiceUnavailableError.js +1 -1
  211. package/dist/cjs/api/resources/voice/errors/UnauthorizedError.js +1 -1
  212. package/dist/cjs/api/resources/workflows/client/Client.js +4 -3
  213. package/dist/cjs/api/resources/workflows/errors/BadRequestError.js +1 -1
  214. package/dist/cjs/api/resources/workflows/errors/ForbiddenError.js +1 -1
  215. package/dist/cjs/api/resources/workflows/errors/GatewayTimeoutError.js +1 -1
  216. package/dist/cjs/api/resources/workflows/errors/InternalServerError.js +1 -1
  217. package/dist/cjs/api/resources/workflows/errors/NotFoundError.js +1 -1
  218. package/dist/cjs/api/resources/workflows/errors/UnauthorizedError.js +1 -1
  219. package/dist/cjs/core/file/file.js +3 -0
  220. package/dist/cjs/core/requestBody.d.ts +12 -0
  221. package/dist/cjs/core/requestBody.js +26 -0
  222. package/dist/cjs/core/stream/Stream.d.ts +45 -1
  223. package/dist/cjs/core/stream/Stream.js +323 -84
  224. package/dist/cjs/core/stream/index.d.ts +1 -0
  225. package/dist/cjs/core/url/qs.js +2 -2
  226. package/dist/cjs/errors/phenomlError.d.ts +1 -0
  227. package/dist/cjs/errors/phenomlError.js +5 -1
  228. package/dist/cjs/errors/phenomlTimeoutError.d.ts +2 -2
  229. package/dist/cjs/errors/phenomlTimeoutError.js +40 -6
  230. package/dist/cjs/version.d.ts +1 -1
  231. package/dist/cjs/version.js +1 -1
  232. package/dist/esm/BaseClient.d.mts +12 -0
  233. package/dist/esm/BaseClient.mjs +2 -2
  234. package/dist/esm/Client.d.mts +6 -0
  235. package/dist/esm/Client.mjs +10 -0
  236. package/dist/esm/api/resources/agent/client/Client.mjs +4 -3
  237. package/dist/esm/api/resources/agent/errors/BadRequestError.mjs +1 -1
  238. package/dist/esm/api/resources/agent/errors/ConflictError.mjs +1 -1
  239. package/dist/esm/api/resources/agent/errors/ForbiddenError.mjs +1 -1
  240. package/dist/esm/api/resources/agent/errors/GatewayTimeoutError.mjs +1 -1
  241. package/dist/esm/api/resources/agent/errors/InternalServerError.mjs +1 -1
  242. package/dist/esm/api/resources/agent/errors/NotFoundError.mjs +1 -1
  243. package/dist/esm/api/resources/agent/errors/UnauthorizedError.mjs +1 -1
  244. package/dist/esm/api/resources/agent/resources/chat/client/Client.mjs +3 -2
  245. package/dist/esm/api/resources/agent/resources/prompts/client/Client.mjs +4 -3
  246. package/dist/esm/api/resources/authtoken/client/Client.mjs +2 -1
  247. package/dist/esm/api/resources/authtoken/errors/BadRequestError.mjs +1 -1
  248. package/dist/esm/api/resources/authtoken/errors/InternalServerError.mjs +1 -1
  249. package/dist/esm/api/resources/authtoken/errors/UnauthorizedError.mjs +1 -1
  250. package/dist/esm/api/resources/cohort/client/Client.mjs +2 -1
  251. package/dist/esm/api/resources/cohort/errors/BadRequestError.mjs +1 -1
  252. package/dist/esm/api/resources/cohort/errors/InternalServerError.mjs +1 -1
  253. package/dist/esm/api/resources/cohort/errors/UnauthorizedError.mjs +1 -1
  254. package/dist/esm/api/resources/construe/client/Client.mjs +2 -1
  255. package/dist/esm/api/resources/construe/errors/BadRequestError.mjs +1 -1
  256. package/dist/esm/api/resources/construe/errors/ConflictError.mjs +1 -1
  257. package/dist/esm/api/resources/construe/errors/FailedDependencyError.mjs +1 -1
  258. package/dist/esm/api/resources/construe/errors/ForbiddenError.mjs +1 -1
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  467. /package/dist/esm/api/resources/{lang2Fhir/client/requests/ProfileUploadRequest.mjs → construe/resources/codes/client/requests/PhenoCrRequest.mjs} +0 -0
@@ -0,0 +1,279 @@
1
+ // This file was auto-generated by Fern from our API Definition.
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+ var __awaiter = (this && this.__awaiter) || function (thisArg, _arguments, P, generator) {
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+ function adopt(value) { return value instanceof P ? value : new P(function (resolve) { resolve(value); }); }
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+ return new (P || (P = Promise))(function (resolve, reject) {
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+ function fulfilled(value) { try { step(generator.next(value)); } catch (e) { reject(e); } }
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+ function rejected(value) { try { step(generator["throw"](value)); } catch (e) { reject(e); } }
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+ function step(result) { result.done ? resolve(result.value) : adopt(result.value).then(fulfilled, rejected); }
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+ step((generator = generator.apply(thisArg, _arguments || [])).next());
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+ });
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+ };
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+ import { normalizeClientOptionsWithAuth } from "../../../../../../BaseClient.mjs";
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+ import { mergeHeaders } from "../../../../../../core/headers.mjs";
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+ import * as core from "../../../../../../core/index.mjs";
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+ import { mergeAdditionalBodyParameters } from "../../../../../../core/requestBody.mjs";
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+ import * as environments from "../../../../../../environments.mjs";
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+ import { handleNonStatusCodeError } from "../../../../../../errors/handleNonStatusCodeError.mjs";
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+ import * as errors from "../../../../../../errors/index.mjs";
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+ import * as phenoml from "../../../../../index.mjs";
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+ /**
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+ * Manage implementation guides that group custom FHIR profiles.
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+ */
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+ export class ImplementationGuidesClient {
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+ constructor(options = {}) {
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+ this._options = normalizeClientOptionsWithAuth(options);
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+ }
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+ /**
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+ * Returns every implementation guide on this instance — both guides that
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+ * have stored metadata (a profile_context) and guides referenced by at
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+ * least one custom profile — with the number of profiles in each.
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+ *
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+ * @param {ImplementationGuidesClient.RequestOptions} requestOptions - Request-specific configuration.
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+ *
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+ * @throws {@link phenoml.implementationGuides.UnauthorizedError}
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+ * @throws {@link phenoml.implementationGuides.ForbiddenError}
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+ * @throws {@link phenoml.implementationGuides.InternalServerError}
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+ *
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+ * @example
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+ * await client.implementationGuides.implementationGuides.list()
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+ */
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+ list(requestOptions) {
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+ return core.HttpResponsePromise.fromPromise(this.__list(requestOptions));
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+ }
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+ __list(requestOptions) {
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+ return __awaiter(this, void 0, void 0, function* () {
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+ var _a, _b, _c, _d, _e, _f, _g, _h, _j, _k;
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+ const _authRequest = yield this._options.authProvider.getAuthRequest();
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+ const _headers = mergeHeaders(_authRequest.headers, (_a = this._options) === null || _a === void 0 ? void 0 : _a.headers, requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.headers);
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+ const _response = yield ((_b = this._options.fetcher) !== null && _b !== void 0 ? _b : core.fetcher)({
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+ url: core.url.join((_d = (_c = (yield core.Supplier.get(this._options.baseUrl))) !== null && _c !== void 0 ? _c : (yield core.Supplier.get(this._options.environment))) !== null && _d !== void 0 ? _d : environments.phenomlEnvironment.Default, "fhir/implementation-guides"),
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+ method: "GET",
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+ headers: _headers,
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+ queryString: core.url.queryBuilder().mergeAdditional(requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.queryParams).build(),
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+ timeoutMs: ((_g = (_e = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.timeoutInSeconds) !== null && _e !== void 0 ? _e : (_f = this._options) === null || _f === void 0 ? void 0 : _f.timeoutInSeconds) !== null && _g !== void 0 ? _g : 60) * 1000,
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+ maxRetries: (_h = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.maxRetries) !== null && _h !== void 0 ? _h : (_j = this._options) === null || _j === void 0 ? void 0 : _j.maxRetries,
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+ abortSignal: requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.abortSignal,
56
+ fetchFn: (_k = this._options) === null || _k === void 0 ? void 0 : _k.fetch,
57
+ logging: this._options.logging,
58
+ });
59
+ if (_response.ok) {
60
+ return {
61
+ data: _response.body,
62
+ rawResponse: _response.rawResponse,
63
+ };
64
+ }
65
+ if (_response.error.reason === "status-code") {
66
+ switch (_response.error.statusCode) {
67
+ case 401:
68
+ throw new phenoml.implementationGuides.UnauthorizedError(_response.error.body, _response.rawResponse);
69
+ case 403:
70
+ throw new phenoml.implementationGuides.ForbiddenError(_response.error.body, _response.rawResponse);
71
+ case 500:
72
+ throw new phenoml.implementationGuides.InternalServerError(_response.error.body, _response.rawResponse);
73
+ default:
74
+ throw new errors.phenomlError({
75
+ statusCode: _response.error.statusCode,
76
+ body: _response.error.body,
77
+ rawResponse: _response.rawResponse,
78
+ });
79
+ }
80
+ }
81
+ return handleNonStatusCodeError(_response.error, _response.rawResponse, "GET", "/fhir/implementation-guides");
82
+ });
83
+ }
84
+ /**
85
+ * Returns a single implementation guide, including its profile_context and
86
+ * the ids of the profiles that belong to it.
87
+ *
88
+ * @param {string} name - The implementation guide name.
89
+ * @param {ImplementationGuidesClient.RequestOptions} requestOptions - Request-specific configuration.
90
+ *
91
+ * @throws {@link phenoml.implementationGuides.BadRequestError}
92
+ * @throws {@link phenoml.implementationGuides.UnauthorizedError}
93
+ * @throws {@link phenoml.implementationGuides.ForbiddenError}
94
+ * @throws {@link phenoml.implementationGuides.NotFoundError}
95
+ * @throws {@link phenoml.implementationGuides.InternalServerError}
96
+ *
97
+ * @example
98
+ * await client.implementationGuides.implementationGuides.get("acme-cardiology")
99
+ */
100
+ get(name, requestOptions) {
101
+ return core.HttpResponsePromise.fromPromise(this.__get(name, requestOptions));
102
+ }
103
+ __get(name, requestOptions) {
104
+ return __awaiter(this, void 0, void 0, function* () {
105
+ var _a, _b, _c, _d, _e, _f, _g, _h, _j, _k;
106
+ const _authRequest = yield this._options.authProvider.getAuthRequest();
107
+ const _headers = mergeHeaders(_authRequest.headers, (_a = this._options) === null || _a === void 0 ? void 0 : _a.headers, requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.headers);
108
+ const _response = yield ((_b = this._options.fetcher) !== null && _b !== void 0 ? _b : core.fetcher)({
109
+ url: core.url.join((_d = (_c = (yield core.Supplier.get(this._options.baseUrl))) !== null && _c !== void 0 ? _c : (yield core.Supplier.get(this._options.environment))) !== null && _d !== void 0 ? _d : environments.phenomlEnvironment.Default, `fhir/implementation-guides/${core.url.encodePathParam(name)}`),
110
+ method: "GET",
111
+ headers: _headers,
112
+ queryString: core.url.queryBuilder().mergeAdditional(requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.queryParams).build(),
113
+ timeoutMs: ((_g = (_e = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.timeoutInSeconds) !== null && _e !== void 0 ? _e : (_f = this._options) === null || _f === void 0 ? void 0 : _f.timeoutInSeconds) !== null && _g !== void 0 ? _g : 60) * 1000,
114
+ maxRetries: (_h = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.maxRetries) !== null && _h !== void 0 ? _h : (_j = this._options) === null || _j === void 0 ? void 0 : _j.maxRetries,
115
+ abortSignal: requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.abortSignal,
116
+ fetchFn: (_k = this._options) === null || _k === void 0 ? void 0 : _k.fetch,
117
+ logging: this._options.logging,
118
+ });
119
+ if (_response.ok) {
120
+ return {
121
+ data: _response.body,
122
+ rawResponse: _response.rawResponse,
123
+ };
124
+ }
125
+ if (_response.error.reason === "status-code") {
126
+ switch (_response.error.statusCode) {
127
+ case 400:
128
+ throw new phenoml.implementationGuides.BadRequestError(_response.error.body, _response.rawResponse);
129
+ case 401:
130
+ throw new phenoml.implementationGuides.UnauthorizedError(_response.error.body, _response.rawResponse);
131
+ case 403:
132
+ throw new phenoml.implementationGuides.ForbiddenError(_response.error.body, _response.rawResponse);
133
+ case 404:
134
+ throw new phenoml.implementationGuides.NotFoundError(_response.error.body, _response.rawResponse);
135
+ case 500:
136
+ throw new phenoml.implementationGuides.InternalServerError(_response.error.body, _response.rawResponse);
137
+ default:
138
+ throw new errors.phenomlError({
139
+ statusCode: _response.error.statusCode,
140
+ body: _response.error.body,
141
+ rawResponse: _response.rawResponse,
142
+ });
143
+ }
144
+ }
145
+ return handleNonStatusCodeError(_response.error, _response.rawResponse, "GET", "/fhir/implementation-guides/{name}");
146
+ });
147
+ }
148
+ /**
149
+ * Sets (or clears, with an empty value) the natural-language profile_context
150
+ * for an implementation guide. The context is injected into the LLM during
151
+ * resource detection to help select the right profiles from this guide.
152
+ * It applies to every profile in the guide.
153
+ *
154
+ * @param {string} name - The implementation guide name.
155
+ * @param {phenoml.implementationGuides.UpdateImplementationGuideRequest} request
156
+ * @param {ImplementationGuidesClient.RequestOptions} requestOptions - Request-specific configuration.
157
+ *
158
+ * @throws {@link phenoml.implementationGuides.BadRequestError}
159
+ * @throws {@link phenoml.implementationGuides.UnauthorizedError}
160
+ * @throws {@link phenoml.implementationGuides.ForbiddenError}
161
+ * @throws {@link phenoml.implementationGuides.InternalServerError}
162
+ *
163
+ * @example
164
+ * await client.implementationGuides.implementationGuides.update("acme-cardiology")
165
+ */
166
+ update(name, request = {}, requestOptions) {
167
+ return core.HttpResponsePromise.fromPromise(this.__update(name, request, requestOptions));
168
+ }
169
+ __update(name_1) {
170
+ return __awaiter(this, arguments, void 0, function* (name, request = {}, requestOptions) {
171
+ var _a, _b, _c, _d, _e, _f, _g, _h, _j, _k;
172
+ const _authRequest = yield this._options.authProvider.getAuthRequest();
173
+ const _headers = mergeHeaders(_authRequest.headers, (_a = this._options) === null || _a === void 0 ? void 0 : _a.headers, requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.headers);
174
+ const _response = yield ((_b = this._options.fetcher) !== null && _b !== void 0 ? _b : core.fetcher)({
175
+ url: core.url.join((_d = (_c = (yield core.Supplier.get(this._options.baseUrl))) !== null && _c !== void 0 ? _c : (yield core.Supplier.get(this._options.environment))) !== null && _d !== void 0 ? _d : environments.phenomlEnvironment.Default, `fhir/implementation-guides/${core.url.encodePathParam(name)}`),
176
+ method: "PUT",
177
+ headers: _headers,
178
+ contentType: "application/json",
179
+ queryString: core.url.queryBuilder().mergeAdditional(requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.queryParams).build(),
180
+ requestType: "json",
181
+ body: mergeAdditionalBodyParameters(request, requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.additionalBodyParameters),
182
+ timeoutMs: ((_g = (_e = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.timeoutInSeconds) !== null && _e !== void 0 ? _e : (_f = this._options) === null || _f === void 0 ? void 0 : _f.timeoutInSeconds) !== null && _g !== void 0 ? _g : 60) * 1000,
183
+ maxRetries: (_h = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.maxRetries) !== null && _h !== void 0 ? _h : (_j = this._options) === null || _j === void 0 ? void 0 : _j.maxRetries,
184
+ abortSignal: requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.abortSignal,
185
+ fetchFn: (_k = this._options) === null || _k === void 0 ? void 0 : _k.fetch,
186
+ logging: this._options.logging,
187
+ });
188
+ if (_response.ok) {
189
+ return {
190
+ data: _response.body,
191
+ rawResponse: _response.rawResponse,
192
+ };
193
+ }
194
+ if (_response.error.reason === "status-code") {
195
+ switch (_response.error.statusCode) {
196
+ case 400:
197
+ throw new phenoml.implementationGuides.BadRequestError(_response.error.body, _response.rawResponse);
198
+ case 401:
199
+ throw new phenoml.implementationGuides.UnauthorizedError(_response.error.body, _response.rawResponse);
200
+ case 403:
201
+ throw new phenoml.implementationGuides.ForbiddenError(_response.error.body, _response.rawResponse);
202
+ case 500:
203
+ throw new phenoml.implementationGuides.InternalServerError(_response.error.body, _response.rawResponse);
204
+ default:
205
+ throw new errors.phenomlError({
206
+ statusCode: _response.error.statusCode,
207
+ body: _response.error.body,
208
+ rawResponse: _response.rawResponse,
209
+ });
210
+ }
211
+ }
212
+ return handleNonStatusCodeError(_response.error, _response.rawResponse, "PUT", "/fhir/implementation-guides/{name}");
213
+ });
214
+ }
215
+ /**
216
+ * Deletes the stored metadata for an implementation guide — its
217
+ * profile_context and timestamps. Member profiles keep their
218
+ * implementation_guide assignment, so a guide still referenced by at least
219
+ * one profile continues to appear in listings, just without context or
220
+ * timestamps.
221
+ *
222
+ * @param {string} name - The implementation guide name.
223
+ * @param {ImplementationGuidesClient.RequestOptions} requestOptions - Request-specific configuration.
224
+ *
225
+ * @throws {@link phenoml.implementationGuides.BadRequestError}
226
+ * @throws {@link phenoml.implementationGuides.UnauthorizedError}
227
+ * @throws {@link phenoml.implementationGuides.ForbiddenError}
228
+ * @throws {@link phenoml.implementationGuides.NotFoundError}
229
+ * @throws {@link phenoml.implementationGuides.InternalServerError}
230
+ *
231
+ * @example
232
+ * await client.implementationGuides.implementationGuides.delete("acme-cardiology")
233
+ */
234
+ delete(name, requestOptions) {
235
+ return core.HttpResponsePromise.fromPromise(this.__delete(name, requestOptions));
236
+ }
237
+ __delete(name, requestOptions) {
238
+ return __awaiter(this, void 0, void 0, function* () {
239
+ var _a, _b, _c, _d, _e, _f, _g, _h, _j, _k;
240
+ const _authRequest = yield this._options.authProvider.getAuthRequest();
241
+ const _headers = mergeHeaders(_authRequest.headers, (_a = this._options) === null || _a === void 0 ? void 0 : _a.headers, requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.headers);
242
+ const _response = yield ((_b = this._options.fetcher) !== null && _b !== void 0 ? _b : core.fetcher)({
243
+ url: core.url.join((_d = (_c = (yield core.Supplier.get(this._options.baseUrl))) !== null && _c !== void 0 ? _c : (yield core.Supplier.get(this._options.environment))) !== null && _d !== void 0 ? _d : environments.phenomlEnvironment.Default, `fhir/implementation-guides/${core.url.encodePathParam(name)}`),
244
+ method: "DELETE",
245
+ headers: _headers,
246
+ queryString: core.url.queryBuilder().mergeAdditional(requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.queryParams).build(),
247
+ timeoutMs: ((_g = (_e = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.timeoutInSeconds) !== null && _e !== void 0 ? _e : (_f = this._options) === null || _f === void 0 ? void 0 : _f.timeoutInSeconds) !== null && _g !== void 0 ? _g : 60) * 1000,
248
+ maxRetries: (_h = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.maxRetries) !== null && _h !== void 0 ? _h : (_j = this._options) === null || _j === void 0 ? void 0 : _j.maxRetries,
249
+ abortSignal: requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.abortSignal,
250
+ fetchFn: (_k = this._options) === null || _k === void 0 ? void 0 : _k.fetch,
251
+ logging: this._options.logging,
252
+ });
253
+ if (_response.ok) {
254
+ return { data: undefined, rawResponse: _response.rawResponse };
255
+ }
256
+ if (_response.error.reason === "status-code") {
257
+ switch (_response.error.statusCode) {
258
+ case 400:
259
+ throw new phenoml.implementationGuides.BadRequestError(_response.error.body, _response.rawResponse);
260
+ case 401:
261
+ throw new phenoml.implementationGuides.UnauthorizedError(_response.error.body, _response.rawResponse);
262
+ case 403:
263
+ throw new phenoml.implementationGuides.ForbiddenError(_response.error.body, _response.rawResponse);
264
+ case 404:
265
+ throw new phenoml.implementationGuides.NotFoundError(_response.error.body, _response.rawResponse);
266
+ case 500:
267
+ throw new phenoml.implementationGuides.InternalServerError(_response.error.body, _response.rawResponse);
268
+ default:
269
+ throw new errors.phenomlError({
270
+ statusCode: _response.error.statusCode,
271
+ body: _response.error.body,
272
+ rawResponse: _response.rawResponse,
273
+ });
274
+ }
275
+ }
276
+ return handleNonStatusCodeError(_response.error, _response.rawResponse, "DELETE", "/fhir/implementation-guides/{name}");
277
+ });
278
+ }
279
+ }
@@ -0,0 +1 @@
1
+ export * from "./requests/index.mjs";
@@ -0,0 +1,8 @@
1
+ /**
2
+ * @example
3
+ * {}
4
+ */
5
+ export interface UpdateImplementationGuideRequest {
6
+ /** Natural-language context that helps the LLM select the right profiles from this implementation guide during resource detection. An empty value clears the context. Max 2000 characters. */
7
+ profile_context?: string;
8
+ }
@@ -0,0 +1,2 @@
1
+ // This file was auto-generated by Fern from our API Definition.
2
+ export {};
@@ -0,0 +1 @@
1
+ export type { UpdateImplementationGuideRequest } from "./UpdateImplementationGuideRequest.mjs";
@@ -0,0 +1,2 @@
1
+ export { ImplementationGuidesClient } from "./client/Client.mjs";
2
+ export * from "./client/index.mjs";
@@ -0,0 +1,3 @@
1
+ // This file was auto-generated by Fern from our API Definition.
2
+ export { ImplementationGuidesClient } from "./client/Client.mjs";
3
+ export * from "./client/index.mjs";
@@ -0,0 +1 @@
1
+ export * from "./client/index.mjs";
@@ -0,0 +1 @@
1
+ export * from "./client/index.mjs";
@@ -0,0 +1,2 @@
1
+ export * from "./implementationGuides/client/requests/index.mjs";
2
+ export * as implementationGuides from "./implementationGuides/index.mjs";
@@ -0,0 +1,2 @@
1
+ export * from "./implementationGuides/client/requests/index.mjs";
2
+ export * as implementationGuides from "./implementationGuides/index.mjs";
@@ -0,0 +1,5 @@
1
+ import type * as phenoml from "../../../index.mjs";
2
+ export interface ImplementationGuideDetail extends phenoml.implementationGuides.ImplementationGuideSummary {
3
+ /** The ids of the profiles that belong to this implementation guide. */
4
+ profiles?: string[] | undefined;
5
+ }
@@ -0,0 +1,2 @@
1
+ // This file was auto-generated by Fern from our API Definition.
2
+ export {};
@@ -0,0 +1,4 @@
1
+ import type * as phenoml from "../../../index.mjs";
2
+ export interface ImplementationGuideListResponse {
3
+ implementation_guides?: phenoml.implementationGuides.ImplementationGuideSummary[] | undefined;
4
+ }
@@ -0,0 +1,2 @@
1
+ // This file was auto-generated by Fern from our API Definition.
2
+ export {};
@@ -0,0 +1,15 @@
1
+ /**
2
+ * Metadata for an implementation guide. This is an instance-local grouping record, not a complete FHIR ImplementationGuide resource.
3
+ */
4
+ export interface ImplementationGuideSummary {
5
+ /** The instance-local implementation guide name (the stable key). */
6
+ name?: string | undefined;
7
+ /** Natural-language context injected into the LLM during resource detection. */
8
+ profile_context?: string | undefined;
9
+ /** The number of custom profiles in this implementation guide. */
10
+ profile_count?: number | undefined;
11
+ /** Present only for guides that have stored metadata (a profile_context has been set). Omitted for guides that exist solely because a profile references them. */
12
+ created_at?: string | undefined;
13
+ /** Present only for guides that have stored metadata. Omitted for guides that exist solely because a profile references them. */
14
+ updated_at?: string | undefined;
15
+ }
@@ -0,0 +1,2 @@
1
+ // This file was auto-generated by Fern from our API Definition.
2
+ export {};
@@ -0,0 +1,3 @@
1
+ export * from "./ImplementationGuideDetail.mjs";
2
+ export * from "./ImplementationGuideListResponse.mjs";
3
+ export * from "./ImplementationGuideSummary.mjs";
@@ -0,0 +1,3 @@
1
+ export * from "./ImplementationGuideDetail.mjs";
2
+ export * from "./ImplementationGuideListResponse.mjs";
3
+ export * from "./ImplementationGuideSummary.mjs";
@@ -5,7 +5,9 @@ export * as construe from "./construe/index.mjs";
5
5
  export * as fhir from "./fhir/index.mjs";
6
6
  export * as fhir2Omop from "./fhir2Omop/index.mjs";
7
7
  export * as fhirProvider from "./fhirProvider/index.mjs";
8
+ export * as implementationGuides from "./implementationGuides/index.mjs";
8
9
  export * as lang2Fhir from "./lang2Fhir/index.mjs";
10
+ export * as profiles from "./profiles/index.mjs";
9
11
  export * as summary from "./summary/index.mjs";
10
12
  export * as tools from "./tools/index.mjs";
11
13
  export * as voice from "./voice/index.mjs";
@@ -5,7 +5,9 @@ export * as construe from "./construe/index.mjs";
5
5
  export * as fhir from "./fhir/index.mjs";
6
6
  export * as fhir2Omop from "./fhir2Omop/index.mjs";
7
7
  export * as fhirProvider from "./fhirProvider/index.mjs";
8
+ export * as implementationGuides from "./implementationGuides/index.mjs";
8
9
  export * as lang2Fhir from "./lang2Fhir/index.mjs";
10
+ export * as profiles from "./profiles/index.mjs";
9
11
  export * as summary from "./summary/index.mjs";
10
12
  export * as tools from "./tools/index.mjs";
11
13
  export * as voice from "./voice/index.mjs";
@@ -89,6 +89,14 @@ export declare class Lang2FhirClient {
89
89
  search(request: phenoml.lang2Fhir.SearchRequest, requestOptions?: Lang2FhirClient.RequestOptions): core.HttpResponsePromise<phenoml.lang2Fhir.SearchResponse>;
90
90
  private __search;
91
91
  /**
92
+ * @deprecated
93
+ *
94
+ * **Deprecated — use `POST /fhir/profiles` instead.** This route continues to work
95
+ * and operates on the same custom profiles, so no migration is required; it
96
+ * will be removed in a future release. Note that `POST /fhir/profiles` does not
97
+ * accept `profile_context`; set implementation-guide context with
98
+ * `PUT /fhir/implementation-guides/{name}`.
99
+ *
92
100
  * Upload a custom FHIR StructureDefinition profile for use with the lang2fhir service.
93
101
  *
94
102
  * All metadata is derived from the StructureDefinition JSON itself. The lowercase `id` field
@@ -11,6 +11,7 @@ var __awaiter = (this && this.__awaiter) || function (thisArg, _arguments, P, ge
11
11
  import { normalizeClientOptionsWithAuth } from "../../../../BaseClient.mjs";
12
12
  import { mergeHeaders } from "../../../../core/headers.mjs";
13
13
  import * as core from "../../../../core/index.mjs";
14
+ import { mergeAdditionalBodyParameters } from "../../../../core/requestBody.mjs";
14
15
  import * as environments from "../../../../environments.mjs";
15
16
  import { handleNonStatusCodeError } from "../../../../errors/handleNonStatusCodeError.mjs";
16
17
  import * as errors from "../../../../errors/index.mjs";
@@ -62,7 +63,7 @@ export class Lang2FhirClient {
62
63
  contentType: "application/json",
63
64
  queryString: core.url.queryBuilder().mergeAdditional(requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.queryParams).build(),
64
65
  requestType: "json",
65
- body: request,
66
+ body: mergeAdditionalBodyParameters(request, requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.additionalBodyParameters),
66
67
  timeoutMs: ((_g = (_e = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.timeoutInSeconds) !== null && _e !== void 0 ? _e : (_f = this._options) === null || _f === void 0 ? void 0 : _f.timeoutInSeconds) !== null && _g !== void 0 ? _g : 60) * 1000,
67
68
  maxRetries: (_h = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.maxRetries) !== null && _h !== void 0 ? _h : (_j = this._options) === null || _j === void 0 ? void 0 : _j.maxRetries,
68
69
  abortSignal: requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.abortSignal,
@@ -132,7 +133,7 @@ export class Lang2FhirClient {
132
133
  contentType: "application/json",
133
134
  queryString: core.url.queryBuilder().mergeAdditional(requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.queryParams).build(),
134
135
  requestType: "json",
135
- body: request,
136
+ body: mergeAdditionalBodyParameters(request, requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.additionalBodyParameters),
136
137
  timeoutMs: ((_g = (_e = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.timeoutInSeconds) !== null && _e !== void 0 ? _e : (_f = this._options) === null || _f === void 0 ? void 0 : _f.timeoutInSeconds) !== null && _g !== void 0 ? _g : 60) * 1000,
137
138
  maxRetries: (_h = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.maxRetries) !== null && _h !== void 0 ? _h : (_j = this._options) === null || _j === void 0 ? void 0 : _j.maxRetries,
138
139
  abortSignal: requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.abortSignal,
@@ -205,7 +206,7 @@ export class Lang2FhirClient {
205
206
  contentType: "application/json",
206
207
  queryString: core.url.queryBuilder().mergeAdditional(requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.queryParams).build(),
207
208
  requestType: "json",
208
- body: request,
209
+ body: mergeAdditionalBodyParameters(request, requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.additionalBodyParameters),
209
210
  timeoutMs: ((_g = (_e = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.timeoutInSeconds) !== null && _e !== void 0 ? _e : (_f = this._options) === null || _f === void 0 ? void 0 : _f.timeoutInSeconds) !== null && _g !== void 0 ? _g : 60) * 1000,
210
211
  maxRetries: (_h = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.maxRetries) !== null && _h !== void 0 ? _h : (_j = this._options) === null || _j === void 0 ? void 0 : _j.maxRetries,
211
212
  abortSignal: requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.abortSignal,
@@ -235,6 +236,14 @@ export class Lang2FhirClient {
235
236
  });
236
237
  }
237
238
  /**
239
+ * @deprecated
240
+ *
241
+ * **Deprecated — use `POST /fhir/profiles` instead.** This route continues to work
242
+ * and operates on the same custom profiles, so no migration is required; it
243
+ * will be removed in a future release. Note that `POST /fhir/profiles` does not
244
+ * accept `profile_context`; set implementation-guide context with
245
+ * `PUT /fhir/implementation-guides/{name}`.
246
+ *
238
247
  * Upload a custom FHIR StructureDefinition profile for use with the lang2fhir service.
239
248
  *
240
249
  * All metadata is derived from the StructureDefinition JSON itself. The lowercase `id` field
@@ -276,7 +285,7 @@ export class Lang2FhirClient {
276
285
  contentType: "application/json",
277
286
  queryString: core.url.queryBuilder().mergeAdditional(requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.queryParams).build(),
278
287
  requestType: "json",
279
- body: request,
288
+ body: mergeAdditionalBodyParameters(request, requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.additionalBodyParameters),
280
289
  timeoutMs: ((_g = (_e = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.timeoutInSeconds) !== null && _e !== void 0 ? _e : (_f = this._options) === null || _f === void 0 ? void 0 : _f.timeoutInSeconds) !== null && _g !== void 0 ? _g : 60) * 1000,
281
290
  maxRetries: (_h = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.maxRetries) !== null && _h !== void 0 ? _h : (_j = this._options) === null || _j === void 0 ? void 0 : _j.maxRetries,
282
291
  abortSignal: requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.abortSignal,
@@ -348,7 +357,7 @@ export class Lang2FhirClient {
348
357
  contentType: "application/json",
349
358
  queryString: core.url.queryBuilder().mergeAdditional(requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.queryParams).build(),
350
359
  requestType: "json",
351
- body: request,
360
+ body: mergeAdditionalBodyParameters(request, requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.additionalBodyParameters),
352
361
  timeoutMs: ((_g = (_e = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.timeoutInSeconds) !== null && _e !== void 0 ? _e : (_f = this._options) === null || _f === void 0 ? void 0 : _f.timeoutInSeconds) !== null && _g !== void 0 ? _g : 60) * 1000,
353
362
  maxRetries: (_h = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.maxRetries) !== null && _h !== void 0 ? _h : (_j = this._options) === null || _j === void 0 ? void 0 : _j.maxRetries,
354
363
  abortSignal: requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.abortSignal,
@@ -426,7 +435,7 @@ export class Lang2FhirClient {
426
435
  contentType: "application/json",
427
436
  queryString: core.url.queryBuilder().mergeAdditional(requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.queryParams).build(),
428
437
  requestType: "json",
429
- body: request,
438
+ body: mergeAdditionalBodyParameters(request, requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.additionalBodyParameters),
430
439
  timeoutMs: ((_g = (_e = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.timeoutInSeconds) !== null && _e !== void 0 ? _e : (_f = this._options) === null || _f === void 0 ? void 0 : _f.timeoutInSeconds) !== null && _g !== void 0 ? _g : 60) * 1000,
431
440
  maxRetries: (_h = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.maxRetries) !== null && _h !== void 0 ? _h : (_j = this._options) === null || _j === void 0 ? void 0 : _j.maxRetries,
432
441
  abortSignal: requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.abortSignal,
@@ -2,5 +2,4 @@ export { CreateMultiRequest } from "./CreateMultiRequest.mjs";
2
2
  export { CreateRequest } from "./CreateRequest.mjs";
3
3
  export { DocumentMultiRequest } from "./DocumentMultiRequest.mjs";
4
4
  export type { DocumentRequest } from "./DocumentRequest.mjs";
5
- export type { ProfileUploadRequest } from "./ProfileUploadRequest.mjs";
6
5
  export type { SearchRequest } from "./SearchRequest.mjs";
@@ -12,6 +12,6 @@ export class BadRequestError extends errors.phenomlError {
12
12
  if (Error.captureStackTrace) {
13
13
  Error.captureStackTrace(this, this.constructor);
14
14
  }
15
- this.name = this.constructor.name;
15
+ this.name = "BadRequestError";
16
16
  }
17
17
  }
@@ -12,6 +12,6 @@ export class ClientClosedRequestError extends errors.phenomlError {
12
12
  if (Error.captureStackTrace) {
13
13
  Error.captureStackTrace(this, this.constructor);
14
14
  }
15
- this.name = this.constructor.name;
15
+ this.name = "ClientClosedRequestError";
16
16
  }
17
17
  }
@@ -12,6 +12,6 @@ export class ForbiddenError extends errors.phenomlError {
12
12
  if (Error.captureStackTrace) {
13
13
  Error.captureStackTrace(this, this.constructor);
14
14
  }
15
- this.name = this.constructor.name;
15
+ this.name = "ForbiddenError";
16
16
  }
17
17
  }
@@ -12,6 +12,6 @@ export class GatewayTimeoutError extends errors.phenomlError {
12
12
  if (Error.captureStackTrace) {
13
13
  Error.captureStackTrace(this, this.constructor);
14
14
  }
15
- this.name = this.constructor.name;
15
+ this.name = "GatewayTimeoutError";
16
16
  }
17
17
  }
@@ -12,6 +12,6 @@ export class InternalServerError extends errors.phenomlError {
12
12
  if (Error.captureStackTrace) {
13
13
  Error.captureStackTrace(this, this.constructor);
14
14
  }
15
- this.name = this.constructor.name;
15
+ this.name = "InternalServerError";
16
16
  }
17
17
  }
@@ -12,6 +12,6 @@ export class NotFoundError extends errors.phenomlError {
12
12
  if (Error.captureStackTrace) {
13
13
  Error.captureStackTrace(this, this.constructor);
14
14
  }
15
- this.name = this.constructor.name;
15
+ this.name = "NotFoundError";
16
16
  }
17
17
  }
@@ -12,6 +12,6 @@ export class UnauthorizedError extends errors.phenomlError {
12
12
  if (Error.captureStackTrace) {
13
13
  Error.captureStackTrace(this, this.constructor);
14
14
  }
15
- this.name = this.constructor.name;
15
+ this.name = "UnauthorizedError";
16
16
  }
17
17
  }
@@ -12,6 +12,6 @@ export class UnprocessableEntityError extends errors.phenomlError {
12
12
  if (Error.captureStackTrace) {
13
13
  Error.captureStackTrace(this, this.constructor);
14
14
  }
15
- this.name = this.constructor.name;
15
+ this.name = "UnprocessableEntityError";
16
16
  }
17
17
  }
@@ -46,6 +46,8 @@ export declare namespace CreateMultiResponse {
46
46
  description?: string | undefined;
47
47
  /** Verbatim text excerpt from the original clinical document */
48
48
  originalText?: string | undefined;
49
+ /** 1-indexed source document page number(s) this resource was extracted from. Populated only by the /lang2fhir/document/multi endpoint; omitted when the source page could not be determined (e.g. raw-text create/multi, or a resource with no verbatim source text). */
50
+ sourcePages?: number[] | undefined;
49
51
  }
50
52
  }
51
53
  /**
@@ -1,16 +1,8 @@
1
- /**
2
- * @example
3
- * {
4
- * profile: "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",
5
- * implementation_guide: "acme-cardiology",
6
- * profile_context: "When clinical text describes cardiology-specific findings, prefer this profile over the generic US Core Condition."
7
- * }
8
- */
9
1
  export interface ProfileUploadRequest {
10
2
  /** Base64 encoded JSON string of a FHIR StructureDefinition. The profile must include id, url, type, and a snapshot with elements. All metadata (version, resource type, identifier) is derived from the StructureDefinition itself. The lowercase id from the StructureDefinition becomes the profile's lookup key. */
11
3
  profile: string;
12
4
  /** Implementation Guide name to group this profile under. Defaults to "custom" if omitted. Cannot be "us_core" (reserved). Use this to organize custom profiles into named IGs that can be referenced when calling create/multi or document/multi endpoints. */
13
- implementation_guide?: string;
5
+ implementation_guide?: string | undefined;
14
6
  /** Natural language context that helps the LLM select the right profiles from this implementation guide during resource detection. For example, "When the text mentions phenotypic features or abnormalities, prefer the hpo-observation profile over Condition." This is stored as IG-level metadata and injected into the LLM prompt. Max 2000 characters. Providing this field on any upload will update the context for the entire IG (last write wins). */
15
- profile_context?: string;
7
+ profile_context?: string | undefined;
16
8
  }
@@ -0,0 +1,2 @@
1
+ // This file was auto-generated by Fern from our API Definition.
2
+ export {};