phenoml 0.0.2

package/LICENSE

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+MIT License
+
+Copyright (c) 2025 phenoml
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.

package/README.md

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+# Phenoml TypeScript Library
+
+[![fern shield](https://img.shields.io/badge/%F0%9F%8C%BF-Built%20with%20Fern-brightgreen)](https://buildwithfern.com?utm_source=github&utm_medium=github&utm_campaign=readme&utm_source=https%3A%2F%2Fgithub.com%2Ffern-demo%2Fphenoml-ts-sdk)
+[![npm shield](https://img.shields.io/npm/v/phenoml)](https://www.npmjs.com/package/phenoml)
+
+The Phenoml TypeScript library provides convenient access to the Phenoml APIs from TypeScript.
+
+## Installation
+
+```sh
+npm i -s phenoml
+```
+
+## Reference
+
+A full reference for this library is available [here](https://github.com/fern-demo/phenoml-ts-sdk/blob/HEAD/./reference.md).
+
+## Usage
+
+Instantiate and use the client with the following:
+
+```typescript
+import { PhenoMLClient } from "phenoml";
+
+const client = new PhenoMLClient({
+            username: "your_username",
+            password: "your_password",
+            baseUrl: "https://your-phenoml-instance.com"
+        });
+
+
+await client.agent.create({
+    name: "name",
+    prompts: ["prompt_123", "prompt_456"],
+    is_active: true,
+});
+```
+
+## Request And Response Types
+
+The SDK exports all request and response types as TypeScript interfaces. Simply import them with the
+following namespace:
+
+```typescript
+import { phenoml } from "phenoml";
+
+const request: phenoml.AgentCreateRequest = {
+    ...
+};
+```
+
+## Exception Handling
+
+When the API returns a non-success status code (4xx or 5xx response), a subclass of the following error
+will be thrown.
+
+```typescript
+import { phenomlError } from "phenoml";
+
+try {
+    await client.agent.create(...);
+} catch (err) {
+    if (err instanceof phenomlError) {
+        console.log(err.statusCode);
+        console.log(err.message);
+        console.log(err.body);
+        console.log(err.rawResponse);
+    }
+}
+```
+
+## Advanced
+
+### Additional Headers
+
+If you would like to send additional headers as part of the request, use the `headers` request option.
+
+```typescript
+const response = await client.agent.create(..., {
+    headers: {
+        'X-Custom-Header': 'custom value'
+    }
+});
+```
+
+### Additional Query String Parameters
+
+If you would like to send additional query string parameters as part of the request, use the `queryParams` request option.
+
+```typescript
+const response = await client.agent.create(..., {
+    queryParams: {
+        'customQueryParamKey': 'custom query param value'
+    }
+});
+```
+
+### Retries
+
+The SDK is instrumented with automatic retries with exponential backoff. A request will be retried as long
+as the request is deemed retryable and the number of retry attempts has not grown larger than the configured
+retry limit (default: 2).
+
+A request is deemed retryable when any of the following HTTP status codes is returned:
+
+- [408](https://developer.mozilla.org/en-US/docs/Web/HTTP/Status/408) (Timeout)
+- [429](https://developer.mozilla.org/en-US/docs/Web/HTTP/Status/429) (Too Many Requests)
+- [5XX](https://developer.mozilla.org/en-US/docs/Web/HTTP/Status/500) (Internal Server Errors)
+
+Use the `maxRetries` request option to configure this behavior.
+
+```typescript
+const response = await client.agent.create(..., {
+    maxRetries: 0 // override maxRetries at the request level
+});
+```
+
+### Timeouts
+
+The SDK defaults to a 60 second timeout. Use the `timeoutInSeconds` option to configure this behavior.
+
+```typescript
+const response = await client.agent.create(..., {
+    timeoutInSeconds: 30 // override timeout to 30s
+});
+```
+
+### Aborting Requests
+
+The SDK allows users to abort requests at any point by passing in an abort signal.
+
+```typescript
+const controller = new AbortController();
+const response = await client.agent.create(..., {
+    abortSignal: controller.signal
+});
+controller.abort(); // aborts the request
+```
+
+### Access Raw Response Data
+
+The SDK provides access to raw response data, including headers, through the `.withRawResponse()` method.
+The `.withRawResponse()` method returns a promise that results to an object with a `data` and a `rawResponse` property.
+
+```typescript
+const { data, rawResponse } = await client.agent.create(...).withRawResponse();
+
+console.log(data);
+console.log(rawResponse.headers['X-My-Header']);
+```
+
+### Runtime Compatibility
+
+The SDK works in the following runtimes:
+
+- Node.js 18+
+- Vercel
+- Cloudflare Workers
+- Deno v1.25+
+- Bun 1.0+
+- React Native
+
+### Customizing Fetch Client
+
+The SDK provides a way for you to customize the underlying HTTP client / Fetch function. If you're running in an
+unsupported environment, this provides a way for you to break glass and ensure the SDK works.
+
+```typescript
+import { phenomlClient } from "phenoml";
+
+const client = new phenomlClient({
+    ...
+    fetcher: // provide your implementation here
+});
+```
+
+## Contributing
+
+While we value open-source contributions to this SDK, this library is generated programmatically.
+Additions made directly to this library would have to be moved over to our generation code,
+otherwise they would be overwritten upon the next generated release. Feel free to open a PR as
+a proof of concept, but know that we will not be able to merge it as-is. We suggest opening
+an issue first to discuss with us!
+
+On the other hand, contributions to the README are always very welcome!

package/dist/cjs/Client.d.ts

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+/**
+ * This file was auto-generated by Fern from our API Definition.
+ */
+import * as environments from "./environments.js";
+import * as core from "./core/index.js";
+import { Agent } from "./api/resources/agent/client/Client.js";
+import { Authtoken } from "./api/resources/authtoken/client/Client.js";
+import { Cohort } from "./api/resources/cohort/client/Client.js";
+import { Construe } from "./api/resources/construe/client/Client.js";
+import { Lang2Fhir } from "./api/resources/lang2Fhir/client/Client.js";
+import { Tools } from "./api/resources/tools/client/Client.js";
+export declare namespace phenomlClient {
+    interface Options {
+        environment?: core.Supplier<environments.phenomlEnvironment | string>;
+        /** Specify a custom URL to connect the client to. */
+        baseUrl?: core.Supplier<string>;
+        token: core.Supplier<core.BearerToken>;
+        /** Additional headers to include in requests. */
+        headers?: Record<string, string | core.Supplier<string | undefined> | undefined>;
+        fetcher?: core.FetchFunction;
+    }
+    interface RequestOptions {
+        /** The maximum time to wait for a response in seconds. */
+        timeoutInSeconds?: number;
+        /** The number of times to retry the request. Defaults to 2. */
+        maxRetries?: number;
+        /** A hook to abort the request. */
+        abortSignal?: AbortSignal;
+        /** Additional query string parameters to include in the request. */
+        queryParams?: Record<string, unknown>;
+        /** Additional headers to include in the request. */
+        headers?: Record<string, string | core.Supplier<string | undefined> | undefined>;
+    }
+}
+export declare class phenomlClient {
+    protected readonly _options: phenomlClient.Options;
+    protected _agent: Agent | undefined;
+    protected _authtoken: Authtoken | undefined;
+    protected _cohort: Cohort | undefined;
+    protected _construe: Construe | undefined;
+    protected _lang2Fhir: Lang2Fhir | undefined;
+    protected _tools: Tools | undefined;
+    constructor(_options: phenomlClient.Options);
+    get agent(): Agent;
+    get authtoken(): Authtoken;
+    get cohort(): Cohort;
+    get construe(): Construe;
+    get lang2Fhir(): Lang2Fhir;
+    get tools(): Tools;
+}

package/dist/cjs/Client.js

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+"use strict";
+/**
+ * This file was auto-generated by Fern from our API Definition.
+ */
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.phenomlClient = void 0;
+const core = __importStar(require("./core/index.js"));
+const headers_js_1 = require("./core/headers.js");
+const Client_js_1 = require("./api/resources/agent/client/Client.js");
+const Client_js_2 = require("./api/resources/authtoken/client/Client.js");
+const Client_js_3 = require("./api/resources/cohort/client/Client.js");
+const Client_js_4 = require("./api/resources/construe/client/Client.js");
+const Client_js_5 = require("./api/resources/lang2Fhir/client/Client.js");
+const Client_js_6 = require("./api/resources/tools/client/Client.js");
+class phenomlClient {
+    constructor(_options) {
+        this._options = Object.assign(Object.assign({}, _options), { headers: (0, headers_js_1.mergeHeaders)({
+                "X-Fern-Language": "JavaScript",
+                "X-Fern-SDK-Name": "phenoml",
+                "X-Fern-SDK-Version": "0.0.2",
+                "User-Agent": "phenoml/0.0.2",
+                "X-Fern-Runtime": core.RUNTIME.type,
+                "X-Fern-Runtime-Version": core.RUNTIME.version,
+            }, _options === null || _options === void 0 ? void 0 : _options.headers) });
+    }
+    get agent() {
+        var _a;
+        return ((_a = this._agent) !== null && _a !== void 0 ? _a : (this._agent = new Client_js_1.Agent(this._options)));
+    }
+    get authtoken() {
+        var _a;
+        return ((_a = this._authtoken) !== null && _a !== void 0 ? _a : (this._authtoken = new Client_js_2.Authtoken(this._options)));
+    }
+    get cohort() {
+        var _a;
+        return ((_a = this._cohort) !== null && _a !== void 0 ? _a : (this._cohort = new Client_js_3.Cohort(this._options)));
+    }
+    get construe() {
+        var _a;
+        return ((_a = this._construe) !== null && _a !== void 0 ? _a : (this._construe = new Client_js_4.Construe(this._options)));
+    }
+    get lang2Fhir() {
+        var _a;
+        return ((_a = this._lang2Fhir) !== null && _a !== void 0 ? _a : (this._lang2Fhir = new Client_js_5.Lang2Fhir(this._options)));
+    }
+    get tools() {
+        var _a;
+        return ((_a = this._tools) !== null && _a !== void 0 ? _a : (this._tools = new Client_js_6.Tools(this._options)));
+    }
+}
+exports.phenomlClient = phenomlClient;

package/dist/cjs/WrapperClient.d.ts

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+/**
+ * Simple wrapper client that extends phenomlClient with username/password authentication.
+ * Generates token lazily on first API call when username/password are provided.
+ */
+import * as environments from "./environments.js";
+import * as core from "./core/index.js";
+import { phenomlClient } from "./Client.js";
+export declare namespace PhenoMLClient {
+    interface Options {
+        environment?: core.Supplier<environments.phenomlEnvironment | string>;
+        baseUrl?: core.Supplier<string>;
+        username?: string;
+        password?: string;
+        token?: core.Supplier<core.BearerToken>;
+        headers?: Record<string, string | core.Supplier<string | undefined> | undefined>;
+        fetcher?: core.FetchFunction;
+    }
+}
+export declare class PhenoMLClient extends phenomlClient {
+    constructor(options: PhenoMLClient.Options);
+}

package/dist/cjs/WrapperClient.js

@@ -0,0 +1,111 @@
+"use strict";
+/**
+ * Simple wrapper client that extends phenomlClient with username/password authentication.
+ * Generates token lazily on first API call when username/password are provided.
+ */
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
+var __awaiter = (this && this.__awaiter) || function (thisArg, _arguments, P, generator) {
+    function adopt(value) { return value instanceof P ? value : new P(function (resolve) { resolve(value); }); }
+    return new (P || (P = Promise))(function (resolve, reject) {
+        function fulfilled(value) { try { step(generator.next(value)); } catch (e) { reject(e); } }
+        function rejected(value) { try { step(generator["throw"](value)); } catch (e) { reject(e); } }
+        function step(result) { result.done ? resolve(result.value) : adopt(result.value).then(fulfilled, rejected); }
+        step((generator = generator.apply(thisArg, _arguments || [])).next());
+    });
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.PhenoMLClient = void 0;
+const environments = __importStar(require("./environments.js"));
+const Client_js_1 = require("./Client.js");
+const Client_js_2 = require("./api/resources/authtoken/resources/auth/client/Client.js");
+// Create a token supplier that generates tokens on-demand
+class TokenSupplier {
+    constructor(username, password, baseUrl, fetcher) {
+        this._username = username;
+        this._password = password;
+        this._baseUrl = baseUrl;
+        this._fetcher = fetcher;
+    }
+    get() {
+        return __awaiter(this, void 0, void 0, function* () {
+            if (this._cachedToken) {
+                return this._cachedToken;
+            }
+            if (this._tokenPromise) {
+                this._cachedToken = yield this._tokenPromise;
+                return this._cachedToken;
+            }
+            this._tokenPromise = this._generateToken();
+            this._cachedToken = yield this._tokenPromise;
+            return this._cachedToken;
+        });
+    }
+    _generateToken() {
+        return __awaiter(this, void 0, void 0, function* () {
+            const authClient = new Client_js_2.Auth({
+                baseUrl: this._baseUrl,
+                fetcher: this._fetcher,
+            });
+            const response = yield authClient.generateToken({
+                username: this._username,
+                password: this._password,
+            });
+            return response.token;
+        });
+    }
+}
+class PhenoMLClient extends Client_js_1.phenomlClient {
+    constructor(options) {
+        if (options.token && (options.username || options.password)) {
+            throw new Error("Cannot provide both 'token' and 'username'/'password'");
+        }
+        // If token provided, use directly
+        if (options.token) {
+            super(options);
+            return;
+        }
+        // Validate auth options
+        if (!options.username || !options.password) {
+            throw new Error("Must provide both 'username' and 'password'");
+        }
+        // Create token supplier for username/password
+        const baseUrl = (typeof options.baseUrl === "string" ? options.baseUrl : undefined) ||
+            (typeof options.environment === "string" ? options.environment : undefined) ||
+            environments.phenomlEnvironment.Default;
+        const tokenSupplier = new TokenSupplier(options.username, options.password, baseUrl, options.fetcher);
+        super(Object.assign(Object.assign({}, options), { token: tokenSupplier.get.bind(tokenSupplier), username: undefined, password: undefined }));
+    }
+}
+exports.PhenoMLClient = PhenoMLClient;

package/dist/cjs/api/index.d.ts

@@ -0,0 +1 @@
+export * from "./resources/index.js";

package/dist/cjs/api/index.js

@@ -0,0 +1,17 @@
+"use strict";
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __exportStar = (this && this.__exportStar) || function(m, exports) {
+    for (var p in m) if (p !== "default" && !Object.prototype.hasOwnProperty.call(exports, p)) __createBinding(exports, m, p);
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+__exportStar(require("./resources/index.js"), exports);

package/dist/cjs/api/resources/agent/client/Client.d.ts

@@ -0,0 +1,187 @@
+/**
+ * This file was auto-generated by Fern from our API Definition.
+ */
+import * as environments from "../../../../environments.js";
+import * as core from "../../../../core/index.js";
+import * as phenoml from "../../../index.js";
+import { Prompts } from "../resources/prompts/client/Client.js";
+export declare namespace Agent {
+    interface Options {
+        environment?: core.Supplier<environments.phenomlEnvironment | string>;
+        /** Specify a custom URL to connect the client to. */
+        baseUrl?: core.Supplier<string>;
+        token: core.Supplier<core.BearerToken>;
+        /** Additional headers to include in requests. */
+        headers?: Record<string, string | core.Supplier<string | undefined> | undefined>;
+        fetcher?: core.FetchFunction;
+    }
+    interface RequestOptions {
+        /** The maximum time to wait for a response in seconds. */
+        timeoutInSeconds?: number;
+        /** The number of times to retry the request. Defaults to 2. */
+        maxRetries?: number;
+        /** A hook to abort the request. */
+        abortSignal?: AbortSignal;
+        /** Additional query string parameters to include in the request. */
+        queryParams?: Record<string, unknown>;
+        /** Additional headers to include in the request. */
+        headers?: Record<string, string | core.Supplier<string | undefined> | undefined>;
+    }
+}
+export declare class Agent {
+    protected readonly _options: Agent.Options;
+    protected _prompts: Prompts | undefined;
+    constructor(_options: Agent.Options);
+    get prompts(): Prompts;
+    /**
+     * Creates a new PhenoAgent with specified configuration
+     *
+     * @param {phenoml.agent.AgentCreateRequest} request
+     * @param {Agent.RequestOptions} requestOptions - Request-specific configuration.
+     *
+     * @throws {@link phenoml.agent.BadRequestError}
+     * @throws {@link phenoml.agent.UnauthorizedError}
+     * @throws {@link phenoml.agent.ForbiddenError}
+     * @throws {@link phenoml.agent.InternalServerError}
+     *
+     * @example
+     *     await client.agent.create({
+     *         name: "name",
+     *         prompts: ["prompt_123", "prompt_456"],
+     *         is_active: true
+     *     })
+     */
+    create(request: phenoml.agent.AgentCreateRequest, requestOptions?: Agent.RequestOptions): core.HttpResponsePromise<phenoml.agent.AgentResponse>;
+    private __create;
+    /**
+     * Retrieves a list of PhenoAgents belonging to the authenticated user
+     *
+     * @param {phenoml.agent.AgentListRequest} request
+     * @param {Agent.RequestOptions} requestOptions - Request-specific configuration.
+     *
+     * @throws {@link phenoml.agent.UnauthorizedError}
+     * @throws {@link phenoml.agent.ForbiddenError}
+     * @throws {@link phenoml.agent.InternalServerError}
+     *
+     * @example
+     *     await client.agent.list()
+     */
+    list(request?: phenoml.agent.AgentListRequest, requestOptions?: Agent.RequestOptions): core.HttpResponsePromise<phenoml.agent.AgentListResponse>;
+    private __list;
+    /**
+     * Retrieves a specific agent by its ID
+     *
+     * @param {string} id - Agent ID
+     * @param {Agent.RequestOptions} requestOptions - Request-specific configuration.
+     *
+     * @throws {@link phenoml.agent.UnauthorizedError}
+     * @throws {@link phenoml.agent.ForbiddenError}
+     * @throws {@link phenoml.agent.NotFoundError}
+     * @throws {@link phenoml.agent.InternalServerError}
+     *
+     * @example
+     *     await client.agent.get("id")
+     */
+    get(id: string, requestOptions?: Agent.RequestOptions): core.HttpResponsePromise<phenoml.agent.AgentResponse>;
+    private __get;
+    /**
+     * Updates an existing agent's configuration
+     *
+     * @param {string} id - Agent ID
+     * @param {phenoml.agent.AgentUpdateRequest} request
+     * @param {Agent.RequestOptions} requestOptions - Request-specific configuration.
+     *
+     * @throws {@link phenoml.agent.BadRequestError}
+     * @throws {@link phenoml.agent.UnauthorizedError}
+     * @throws {@link phenoml.agent.ForbiddenError}
+     * @throws {@link phenoml.agent.NotFoundError}
+     * @throws {@link phenoml.agent.InternalServerError}
+     *
+     * @example
+     *     await client.agent.update("id")
+     */
+    update(id: string, request?: phenoml.agent.AgentUpdateRequest, requestOptions?: Agent.RequestOptions): core.HttpResponsePromise<phenoml.agent.AgentResponse>;
+    private __update;
+    /**
+     * Deletes an existing agent
+     *
+     * @param {string} id - Agent ID
+     * @param {Agent.RequestOptions} requestOptions - Request-specific configuration.
+     *
+     * @throws {@link phenoml.agent.UnauthorizedError}
+     * @throws {@link phenoml.agent.ForbiddenError}
+     * @throws {@link phenoml.agent.NotFoundError}
+     * @throws {@link phenoml.agent.InternalServerError}
+     *
+     * @example
+     *     await client.agent.delete("id")
+     */
+    delete(id: string, requestOptions?: Agent.RequestOptions): core.HttpResponsePromise<phenoml.agent.AgentDeleteResponse>;
+    private __delete;
+    /**
+     * Patches an existing agent's configuration
+     *
+     * @param {string} id - Agent ID
+     * @param {phenoml.agent.JsonPatch} request
+     * @param {Agent.RequestOptions} requestOptions - Request-specific configuration.
+     *
+     * @throws {@link phenoml.agent.BadRequestError}
+     * @throws {@link phenoml.agent.UnauthorizedError}
+     * @throws {@link phenoml.agent.ForbiddenError}
+     * @throws {@link phenoml.agent.NotFoundError}
+     * @throws {@link phenoml.agent.InternalServerError}
+     *
+     * @example
+     *     await client.agent.patch("id", [{
+     *             op: "replace",
+     *             path: "/name",
+     *             value: "Updated Agent Name"
+     *         }, {
+     *             op: "add",
+     *             path: "/tags/-",
+     *             value: "new-tag"
+     *         }, {
+     *             op: "remove",
+     *             path: "/description"
+     *         }])
+     */
+    patch(id: string, request: phenoml.agent.JsonPatch, requestOptions?: Agent.RequestOptions): core.HttpResponsePromise<phenoml.agent.AgentResponse>;
+    private __patch;
+    /**
+     * Send a message to an agent and receive a response
+     *
+     * @param {phenoml.agent.AgentChatRequest} request
+     * @param {Agent.RequestOptions} requestOptions - Request-specific configuration.
+     *
+     * @throws {@link phenoml.agent.BadRequestError}
+     * @throws {@link phenoml.agent.UnauthorizedError}
+     * @throws {@link phenoml.agent.ForbiddenError}
+     * @throws {@link phenoml.agent.InternalServerError}
+     *
+     * @example
+     *     await client.agent.chat({
+     *         message: "What is the patient's current condition?",
+     *         agent_id: "agent-123"
+     *     })
+     */
+    chat(request: phenoml.agent.AgentChatRequest, requestOptions?: Agent.RequestOptions): core.HttpResponsePromise<phenoml.agent.AgentChatResponse>;
+    private __chat;
+    /**
+     * Retrieves a list of chat messages for a given chat session
+     *
+     * @param {phenoml.agent.AgentGetChatMessagesRequest} request
+     * @param {Agent.RequestOptions} requestOptions - Request-specific configuration.
+     *
+     * @throws {@link phenoml.agent.UnauthorizedError}
+     * @throws {@link phenoml.agent.ForbiddenError}
+     * @throws {@link phenoml.agent.InternalServerError}
+     *
+     * @example
+     *     await client.agent.getChatMessages({
+     *         chat_session_id: "chat_session_id"
+     *     })
+     */
+    getChatMessages(request: phenoml.agent.AgentGetChatMessagesRequest, requestOptions?: Agent.RequestOptions): core.HttpResponsePromise<phenoml.agent.AgentGetChatMessagesResponse>;
+    private __getChatMessages;
+    protected _getAuthorizationHeader(): Promise<string>;
+}