npm - optave-codegraph - Versions diffs - 3.13.0 - Mend

optave-codegraph 3.13.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (1672) hide show

package/LICENSE +190 -0
package/README.md +984 -0
package/dist/ast-analysis/engine.d.ts +19 -0
package/dist/ast-analysis/engine.d.ts.map +1 -0
package/dist/ast-analysis/engine.js +660 -0
package/dist/ast-analysis/engine.js.map +1 -0
package/dist/ast-analysis/metrics.d.ts +34 -0
package/dist/ast-analysis/metrics.d.ts.map +1 -0
package/dist/ast-analysis/metrics.js +123 -0
package/dist/ast-analysis/metrics.js.map +1 -0
package/dist/ast-analysis/rules/b2.d.ts +7 -0
package/dist/ast-analysis/rules/b2.d.ts.map +1 -0
package/dist/ast-analysis/rules/b2.js +240 -0
package/dist/ast-analysis/rules/b2.js.map +1 -0
package/dist/ast-analysis/rules/b3.d.ts +6 -0
package/dist/ast-analysis/rules/b3.d.ts.map +1 -0
package/dist/ast-analysis/rules/b3.js +105 -0
package/dist/ast-analysis/rules/b3.js.map +1 -0
package/dist/ast-analysis/rules/b4.d.ts +9 -0
package/dist/ast-analysis/rules/b4.d.ts.map +1 -0
package/dist/ast-analysis/rules/b4.js +361 -0
package/dist/ast-analysis/rules/b4.js.map +1 -0
package/dist/ast-analysis/rules/b5.d.ts +4 -0
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package/dist/ast-analysis/rules/b5.js +52 -0
package/dist/ast-analysis/rules/b5.js.map +1 -0
package/dist/ast-analysis/rules/c.d.ts +4 -0
package/dist/ast-analysis/rules/c.d.ts.map +1 -0
package/dist/ast-analysis/rules/c.js +143 -0
package/dist/ast-analysis/rules/c.js.map +1 -0
package/dist/ast-analysis/rules/csharp.d.ts +7 -0
package/dist/ast-analysis/rules/csharp.d.ts.map +1 -0
package/dist/ast-analysis/rules/csharp.js +196 -0
package/dist/ast-analysis/rules/csharp.js.map +1 -0
package/dist/ast-analysis/rules/go.d.ts +7 -0
package/dist/ast-analysis/rules/go.d.ts.map +1 -0
package/dist/ast-analysis/rules/go.js +173 -0
package/dist/ast-analysis/rules/go.js.map +1 -0
package/dist/ast-analysis/rules/index.d.ts +13 -0
package/dist/ast-analysis/rules/index.d.ts.map +1 -0
package/dist/ast-analysis/rules/index.js +325 -0
package/dist/ast-analysis/rules/index.js.map +1 -0
package/dist/ast-analysis/rules/java.d.ts +7 -0
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package/dist/ast-analysis/rules/java.js +167 -0
package/dist/ast-analysis/rules/java.js.map +1 -0
package/dist/ast-analysis/rules/javascript.d.ts +7 -0
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package/dist/ast-analysis/rules/javascript.js +233 -0
package/dist/ast-analysis/rules/javascript.js.map +1 -0
package/dist/ast-analysis/rules/php.d.ts +7 -0
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package/dist/ast-analysis/rules/php.js +212 -0
package/dist/ast-analysis/rules/php.js.map +1 -0
package/dist/ast-analysis/rules/python.d.ts +7 -0
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package/dist/ast-analysis/rules/python.js +189 -0
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package/dist/ast-analysis/rules/ruby.d.ts +7 -0
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package/dist/ast-analysis/rules/ruby.js.map +1 -0
package/dist/ast-analysis/rules/rust.d.ts +7 -0
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package/dist/ast-analysis/rules/rust.js +166 -0
package/dist/ast-analysis/rules/rust.js.map +1 -0
package/dist/ast-analysis/shared.d.ts +12 -0
package/dist/ast-analysis/shared.d.ts.map +1 -0
package/dist/ast-analysis/shared.js +166 -0
package/dist/ast-analysis/shared.js.map +1 -0
package/dist/ast-analysis/visitor-utils.d.ts +70 -0
package/dist/ast-analysis/visitor-utils.d.ts.map +1 -0
package/dist/ast-analysis/visitor-utils.js +235 -0
package/dist/ast-analysis/visitor-utils.js.map +1 -0
package/dist/ast-analysis/visitor.d.ts +27 -0
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package/dist/ast-analysis/visitors/ast-store-visitor.d.ts +4 -0
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package/dist/ast-analysis/visitors/ast-store-visitor.js +288 -0
package/dist/ast-analysis/visitors/ast-store-visitor.js.map +1 -0
package/dist/ast-analysis/visitors/cfg-conditionals.d.ts +5 -0
package/dist/ast-analysis/visitors/cfg-conditionals.d.ts.map +1 -0
package/dist/ast-analysis/visitors/cfg-conditionals.js +166 -0
package/dist/ast-analysis/visitors/cfg-conditionals.js.map +1 -0
package/dist/ast-analysis/visitors/cfg-loops.d.ts +7 -0
package/dist/ast-analysis/visitors/cfg-loops.d.ts.map +1 -0
package/dist/ast-analysis/visitors/cfg-loops.js +73 -0
package/dist/ast-analysis/visitors/cfg-loops.js.map +1 -0
package/dist/ast-analysis/visitors/cfg-shared.d.ts +56 -0
package/dist/ast-analysis/visitors/cfg-shared.d.ts.map +1 -0
package/dist/ast-analysis/visitors/cfg-shared.js +107 -0
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package/dist/ast-analysis/visitors/cfg-try-catch.d.ts +4 -0
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package/dist/ast-analysis/visitors/cfg-visitor.d.ts +5 -0
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package/dist/ast-analysis/visitors/complexity-visitor.d.ts +8 -0
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package/dist/cli/commands/ast.d.ts +3 -0
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package/dist/cli/commands/branch-compare.d.ts +3 -0
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package/dist/cli/commands/brief.d.ts +3 -0
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package/dist/cli/commands/cfg.d.ts +3 -0
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package/dist/cli/commands/check.d.ts +3 -0
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package/dist/cli/commands/check.js +65 -0
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package/dist/cli/commands/children.d.ts +3 -0
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package/dist/cli/commands/co-change.d.ts +3 -0
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package/dist/cli/commands/co-change.js.map +1 -0
package/dist/cli/commands/communities.d.ts +3 -0
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package/dist/cli/commands/cycles.d.ts +3 -0
package/dist/cli/commands/cycles.d.ts.map +1 -0
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package/dist/cli/commands/cycles.js.map +1 -0
package/dist/cli/commands/dataflow.d.ts +3 -0
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package/dist/cli/commands/deps.d.ts +3 -0
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package/dist/cli/commands/diff-impact.d.ts +3 -0
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package/src/presentation/dataflow.ts +179 -0
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package/src/presentation/triage.ts +84 -0
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package/dist/features/triage.d.ts ADDED Viewed

@@ -0,0 +1,47 @@
+import { type Repository } from '../db/index.js';
+import type { RiskWeights } from '../graph/classifiers/risk.js';
+import type { CodegraphConfig, Role } from '../types.js';
+interface TriageItem {
+    name: string;
+    kind: string;
+    file: string;
+    line: number;
+    role: string | null;
+    fanIn: number;
+    cognitive: number;
+    churn: number;
+    maintainabilityIndex: number;
+    normFanIn: number;
+    normComplexity: number;
+    normChurn: number;
+    normMI: number;
+    roleWeight: number;
+    riskScore: number;
+}
+interface TriageSummary {
+    total: number;
+    analyzed: number;
+    avgScore: number;
+    maxScore: number;
+    weights: RiskWeights;
+    signalCoverage: Record<string, number>;
+}
+interface TriageDataOpts {
+    noTests?: boolean;
+    minScore?: number | string | null;
+    sort?: string;
+    config?: CodegraphConfig;
+    weights?: Partial<RiskWeights>;
+    file?: string;
+    kind?: string;
+    role?: Role;
+    limit?: number;
+    offset?: number;
+    repo?: Repository;
+}
+export declare function triageData(customDbPath?: string, opts?: TriageDataOpts): {
+    items: TriageItem[];
+    summary: TriageSummary;
+};
+export {};
+//# sourceMappingURL=triage.d.ts.map

package/dist/features/triage.d.ts.map ADDED Viewed

@@ -0,0 +1 @@

+ {"version":3,"file":"triage.d.ts","sourceRoot":"","sources":["../../src/features/triage.ts"],"names":[],"mappings":"AAAA,OAAO,EAAY,KAAK,UAAU,EAAE,MAAM,gBAAgB,CAAC;AAC3D,OAAO,KAAK,EAAc,WAAW,EAAE,MAAM,8BAA8B,CAAC;AAM5E,OAAO,KAAK,EAAE,eAAe,EAAE,IAAI,EAAiB,MAAM,aAAa,CAAC;AAIxE,UAAU,UAAU;IAClB,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,GAAG,IAAI,CAAC;IACpB,KAAK,EAAE,MAAM,CAAC;IACd,SAAS,EAAE,MAAM,CAAC;IAClB,KAAK,EAAE,MAAM,CAAC;IACd,oBAAoB,EAAE,MAAM,CAAC;IAC7B,SAAS,EAAE,MAAM,CAAC;IAClB,cAAc,EAAE,MAAM,CAAC;IACvB,SAAS,EAAE,MAAM,CAAC;IAClB,MAAM,EAAE,MAAM,CAAC;IACf,UAAU,EAAE,MAAM,CAAC;IACnB,SAAS,EAAE,MAAM,CAAC;CACnB;AA8BD,UAAU,aAAa;IACrB,KAAK,EAAE,MAAM,CAAC;IACd,QAAQ,EAAE,MAAM,CAAC;IACjB,QAAQ,EAAE,MAAM,CAAC;IACjB,QAAQ,EAAE,MAAM,CAAC;IACjB,OAAO,EAAE,WAAW,CAAC;IACrB,cAAc,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC;CACxC;AAwCD,UAAU,cAAc;IACtB,OAAO,CAAC,EAAE,OAAO,CAAC;IAClB,QAAQ,CAAC,EAAE,MAAM,GAAG,MAAM,GAAG,IAAI,CAAC;IAClC,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,MAAM,CAAC,EAAE,eAAe,CAAC;IACzB,OAAO,CAAC,EAAE,OAAO,CAAC,WAAW,CAAC,CAAC;IAC/B,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,IAAI,CAAC,EAAE,IAAI,CAAC;IACZ,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,IAAI,CAAC,EAAE,UAAU,CAAC;CACnB;AA6BD,wBAAgB,UAAU,CACxB,YAAY,CAAC,EAAE,MAAM,EACrB,IAAI,GAAE,cAAmB,GACxB;IAAE,KAAK,EAAE,UAAU,EAAE,CAAC;IAAC,OAAO,EAAE,aAAa,CAAA;CAAE,CA4CjD"}

package/dist/features/triage.js ADDED Viewed

@@ -0,0 +1,123 @@
+import { openRepo } from '../db/index.js';
+import { DEFAULT_WEIGHTS, scoreRisk } from '../graph/classifiers/risk.js';
+import { loadConfig } from '../infrastructure/config.js';
+import { warn } from '../infrastructure/logger.js';
+import { isTestFile } from '../infrastructure/test-filter.js';
+import { paginateResult } from '../shared/paginate.js';
+const SORT_FNS = {
+    risk: (a, b) => b.riskScore - a.riskScore,
+    complexity: (a, b) => b.cognitive - a.cognitive,
+    churn: (a, b) => b.churn - a.churn,
+    'fan-in': (a, b) => b.fanIn - a.fanIn,
+    mi: (a, b) => a.maintainabilityIndex - b.maintainabilityIndex,
+};
+function buildTriageItems(rows, riskMetrics) {
+    return rows.map((r, i) => ({
+        name: r.name,
+        kind: r.kind,
+        file: r.file,
+        line: r.line,
+        role: r.role || null,
+        fanIn: r.fan_in,
+        cognitive: r.cognitive,
+        churn: r.churn,
+        maintainabilityIndex: r.mi,
+        normFanIn: riskMetrics[i].normFanIn,
+        normComplexity: riskMetrics[i].normComplexity,
+        normChurn: riskMetrics[i].normChurn,
+        normMI: riskMetrics[i].normMI,
+        roleWeight: riskMetrics[i].roleWeight,
+        riskScore: riskMetrics[i].riskScore,
+    }));
+}
+function computeTriageSummary(filtered, scored, weights) {
+    const signalCoverage = {
+        complexity: round4(filtered.filter((r) => r.cognitive > 0).length / filtered.length),
+        churn: round4(filtered.filter((r) => r.churn > 0).length / filtered.length),
+        fanIn: round4(filtered.filter((r) => r.fan_in > 0).length / filtered.length),
+        mi: round4(filtered.filter((r) => r.mi > 0).length / filtered.length),
+    };
+    const scores = scored.map((it) => it.riskScore);
+    const avgScore = scores.length > 0 ? round4(scores.reduce((a, b) => a + b, 0) / scores.length) : 0;
+    const maxScore = scores.length > 0 ? round4(Math.max(...scores)) : 0;
+    return {
+        total: filtered.length,
+        analyzed: scored.length,
+        avgScore,
+        maxScore,
+        weights,
+        signalCoverage,
+    };
+}
+// ─── Data Function ────────────────────────────────────────────────────
+const EMPTY_SUMMARY = (weights) => ({
+    total: 0,
+    analyzed: 0,
+    avgScore: 0,
+    maxScore: 0,
+    weights,
+    signalCoverage: {},
+});
+/** Resolve risk weights and role-weight options from config + opts overrides. */
+function resolveRiskConfig(opts) {
+    const config = opts.config || loadConfig();
+    const riskConfig = (config.risk || {});
+    const weights = {
+        ...DEFAULT_WEIGHTS,
+        ...(riskConfig.weights || {}),
+        ...(opts.weights || {}),
+    };
+    return {
+        weights,
+        riskOpts: {
+            roleWeights: riskConfig.roleWeights,
+            defaultRoleWeight: riskConfig.defaultRoleWeight,
+        },
+    };
+}
+export function triageData(customDbPath, opts = {}) {
+    const { repo, close } = openRepo(customDbPath, opts);
+    try {
+        const noTests = opts.noTests || false;
+        const minScore = opts.minScore != null ? Number(opts.minScore) : null;
+        const sort = opts.sort || 'risk';
+        const { weights, riskOpts } = resolveRiskConfig(opts);
+        let rows;
+        try {
+            rows = repo.findNodesForTriage({
+                noTests,
+                file: opts.file || undefined,
+                kind: opts.kind || undefined,
+                role: opts.role || undefined,
+            });
+        }
+        catch (err) {
+            warn(`triage query failed: ${err.message}`);
+            return { items: [], summary: EMPTY_SUMMARY(weights) };
+        }
+        const filtered = noTests ? rows.filter((r) => !isTestFile(r.file)) : rows;
+        if (filtered.length === 0) {
+            return { items: [], summary: EMPTY_SUMMARY(weights) };
+        }
+        const riskMetrics = scoreRisk(filtered, weights, riskOpts);
+        const items = buildTriageItems(filtered, riskMetrics);
+        const scored = minScore != null ? items.filter((it) => it.riskScore >= minScore) : items;
+        scored.sort(SORT_FNS[sort] || SORT_FNS.risk);
+        const result = {
+            items: scored,
+            summary: computeTriageSummary(filtered, scored, weights),
+        };
+        return paginateResult(result, 'items', {
+            limit: opts.limit,
+            offset: opts.offset,
+        });
+    }
+    finally {
+        close();
+    }
+}
+// ─── Utilities ────────────────────────────────────────────────────────
+function round4(n) {
+    return Math.round(n * 10000) / 10000;
+}
+//# sourceMappingURL=triage.js.map

package/dist/features/triage.js.map ADDED Viewed

@@ -0,0 +1 @@

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package/dist/graph/algorithms/bfs.d.ts ADDED Viewed

@@ -0,0 +1,14 @@
+import type { CodeGraph } from '../model.js';
+export interface BfsOpts {
+    maxDepth?: number;
+    direction?: 'forward' | 'backward' | 'both';
+}
+/**
+ * Breadth-first traversal on a CodeGraph.
+ *
+ * Tries the native Rust implementation first, falls back to a pure-JS queue.
+ *
+ * @returns nodeId → depth from nearest start node
+ */
+export declare function bfs(graph: CodeGraph, startIds: string | string[], opts?: BfsOpts): Map<string, number>;
+//# sourceMappingURL=bfs.d.ts.map

package/dist/graph/algorithms/bfs.d.ts.map ADDED Viewed

@@ -0,0 +1 @@

+ {"version":3,"file":"bfs.d.ts","sourceRoot":"","sources":["../../../src/graph/algorithms/bfs.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,EAAE,SAAS,EAAE,MAAM,aAAa,CAAC;AAE7C,MAAM,WAAW,OAAO;IACtB,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,SAAS,CAAC,EAAE,SAAS,GAAG,UAAU,GAAG,MAAM,CAAC;CAC7C;AASD;;;;;;GAMG;AACH,wBAAgB,GAAG,CACjB,KAAK,EAAE,SAAS,EAChB,QAAQ,EAAE,MAAM,GAAG,MAAM,EAAE,EAC3B,IAAI,GAAE,OAAY,GACjB,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,CA2BrB"}

package/dist/graph/algorithms/bfs.js ADDED Viewed

@@ -0,0 +1,72 @@
+import { loadNative } from '../../infrastructure/native.js';
+/** Resolve the neighbor list for a node given traversal direction. */
+function getNeighbors(graph, node, direction) {
+    if (direction === 'forward')
+        return graph.successors(node);
+    if (direction === 'backward')
+        return graph.predecessors(node);
+    return graph.neighbors(node);
+}
+/**
+ * Breadth-first traversal on a CodeGraph.
+ *
+ * Tries the native Rust implementation first, falls back to a pure-JS queue.
+ *
+ * @returns nodeId → depth from nearest start node
+ */
+export function bfs(graph, startIds, opts = {}) {
+    const maxDepth = opts.maxDepth ?? Infinity;
+    const direction = opts.direction ?? 'forward';
+    const starts = Array.isArray(startIds) ? startIds : [startIds];
+    const native = loadNative();
+    if (native?.bfsTraversal) {
+        const edges = graph.toEdgeArray();
+        const nativeMaxDepth = maxDepth === Infinity ? null : maxDepth;
+        // Undirected graphs deduplicate edges to one canonical direction in toEdgeArray(),
+        // so the Rust side must traverse both directions to preserve symmetry.
+        const nativeDirection = !graph.directed ? 'both' : direction;
+        const result = native.bfsTraversal(edges, starts, nativeMaxDepth, nativeDirection);
+        const depths = new Map();
+        for (const entry of result) {
+            depths.set(entry.node, entry.depth);
+        }
+        // The Rust side only knows nodes referenced by edges; restore any isolated start nodes.
+        for (const startId of starts) {
+            if (graph.hasNode(startId) && !depths.has(startId)) {
+                depths.set(startId, 0);
+            }
+        }
+        return depths;
+    }
+    return bfsJS(graph, starts, maxDepth, direction);
+}
+/**
+ * Pure-JS BFS queue (used when native addon is unavailable).
+ * Separated from bfs() to keep each function's complexity within thresholds.
+ */
+function bfsJS(graph, starts, maxDepth, direction) {
+    const depths = new Map();
+    const queue = [];
+    for (const id of starts) {
+        const key = String(id);
+        if (graph.hasNode(key)) {
+            depths.set(key, 0);
+            queue.push(key);
+        }
+    }
+    let head = 0;
+    while (head < queue.length) {
+        const current = queue[head++];
+        const depth = depths.get(current);
+        if (depth >= maxDepth)
+            continue;
+        for (const n of getNeighbors(graph, current, direction)) {
+            if (!depths.has(n)) {
+                depths.set(n, depth + 1);
+                queue.push(n);
+            }
+        }
+    }
+    return depths;
+}
+//# sourceMappingURL=bfs.js.map

package/dist/graph/algorithms/bfs.js.map ADDED Viewed

@@ -0,0 +1 @@

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package/dist/graph/algorithms/centrality.d.ts ADDED Viewed

@@ -0,0 +1,12 @@
+import type { CodeGraph } from '../model.js';
+export interface FanInOut {
+    fanIn: number;
+    fanOut: number;
+}
+/**
+ * Fan-in / fan-out centrality for all nodes in a CodeGraph.
+ *
+ * Tries the native Rust implementation first, falls back to JS.
+ */
+export declare function fanInOut(graph: CodeGraph): Map<string, FanInOut>;
+//# sourceMappingURL=centrality.d.ts.map

package/dist/graph/algorithms/centrality.d.ts.map ADDED Viewed

	@@ -0,0 +1 @@
1	+ {"version":3,"file":"centrality.d.ts","sourceRoot":"","sources":["../../../src/graph/algorithms/centrality.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,EAAE,SAAS,EAAE,MAAM,aAAa,CAAC;AAE7C,MAAM,WAAW,QAAQ;IACvB,KAAK,EAAE,MAAM,CAAC;IACd,MAAM,EAAE,MAAM,CAAC;CAChB;AAED;;;;GAIG;AACH,wBAAgB,QAAQ,CAAC,KAAK,EAAE,SAAS,GAAG,GAAG,CAAC,MAAM,EAAE,QAAQ,CAAC,CAwBhE"}

package/dist/graph/algorithms/centrality.js ADDED Viewed

@@ -0,0 +1,42 @@
+import { loadNative } from '../../infrastructure/native.js';
+/**
+ * Fan-in / fan-out centrality for all nodes in a CodeGraph.
+ *
+ * Tries the native Rust implementation first, falls back to JS.
+ */
+export function fanInOut(graph) {
+    const native = loadNative();
+    if (native?.fanInOut) {
+        let edges = graph.toEdgeArray();
+        if (!graph.directed) {
+            // Undirected: toEdgeArray() deduplicates to one canonical direction;
+            // mirror each edge so the Rust side counts symmetric in/out degrees.
+            edges = [...edges, ...edges.map((e) => ({ source: e.target, target: e.source }))];
+        }
+        const nativeResult = native.fanInOut(edges);
+        const result = new Map();
+        for (const entry of nativeResult) {
+            result.set(entry.node, { fanIn: entry.fanIn, fanOut: entry.fanOut });
+        }
+        // Ensure isolated nodes (no edges) are included
+        for (const id of graph.nodeIds()) {
+            if (!result.has(id)) {
+                result.set(id, { fanIn: 0, fanOut: 0 });
+            }
+        }
+        return result;
+    }
+    return fanInOutJS(graph);
+}
+/** Pure JS fallback for fan-in/out. */
+function fanInOutJS(graph) {
+    const result = new Map();
+    for (const id of graph.nodeIds()) {
+        result.set(id, {
+            fanIn: graph.inDegree(id),
+            fanOut: graph.outDegree(id),
+        });
+    }
+    return result;
+}
+//# sourceMappingURL=centrality.js.map

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package/dist/graph/algorithms/index.d.ts ADDED Viewed

@@ -0,0 +1,7 @@
+export { bfs } from './bfs.js';
+export { fanInOut } from './centrality.js';
+export { detectClusters } from './leiden/index.js';
+export { louvainCommunities } from './louvain.js';
+export { shortestPath } from './shortest-path.js';
+export { tarjan } from './tarjan.js';
+//# sourceMappingURL=index.d.ts.map

package/dist/graph/algorithms/index.d.ts.map ADDED Viewed

	@@ -0,0 +1 @@
1	+ {"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../../src/graph/algorithms/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,GAAG,EAAE,MAAM,UAAU,CAAC;AAC/B,OAAO,EAAE,QAAQ,EAAE,MAAM,iBAAiB,CAAC;AAC3C,OAAO,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AACnD,OAAO,EAAE,kBAAkB,EAAE,MAAM,cAAc,CAAC;AAClD,OAAO,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAClD,OAAO,EAAE,MAAM,EAAE,MAAM,aAAa,CAAC"}

package/dist/graph/algorithms/index.js ADDED Viewed

@@ -0,0 +1,7 @@
+export { bfs } from './bfs.js';
+export { fanInOut } from './centrality.js';
+export { detectClusters } from './leiden/index.js';
+export { louvainCommunities } from './louvain.js';
+export { shortestPath } from './shortest-path.js';
+export { tarjan } from './tarjan.js';
+//# sourceMappingURL=index.js.map

package/dist/graph/algorithms/index.js.map ADDED Viewed

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package/dist/graph/algorithms/leiden/adapter.d.ts ADDED Viewed

@@ -0,0 +1,37 @@
+/**
+ * Graph adapter that converts a CodeGraph into the dense array format
+ * expected by the Leiden optimiser.
+ *
+ * Vendored from ngraph.leiden (MIT) — adapted for CodeGraph.
+ */
+import type { CodeGraph, EdgeAttrs, NodeAttrs } from '../../model.js';
+export interface EdgeEntry {
+    to: number;
+    w: number;
+}
+export interface InEdgeEntry {
+    from: number;
+    w: number;
+}
+export interface GraphAdapterOptions {
+    directed?: boolean;
+    linkWeight?: (attrs: EdgeAttrs) => number;
+    nodeSize?: (attrs: NodeAttrs) => number;
+    baseNodeIds?: string[];
+}
+export interface GraphAdapter {
+    n: number;
+    nodeIds: string[];
+    idToIndex: Map<string, number>;
+    size: Float64Array;
+    selfLoop: Float64Array;
+    strengthOut: Float64Array;
+    strengthIn: Float64Array;
+    outEdges: EdgeEntry[][];
+    inEdges: InEdgeEntry[][];
+    directed: boolean;
+    totalWeight: number;
+    forEachNeighbor: (i: number, cb: (to: number, w: number) => void) => void;
+}
+export declare function makeGraphAdapter(graph: CodeGraph, opts?: GraphAdapterOptions): GraphAdapter;
+//# sourceMappingURL=adapter.d.ts.map

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package/dist/graph/algorithms/leiden/adapter.js ADDED Viewed

@@ -0,0 +1,173 @@
+/**
+ * Graph adapter that converts a CodeGraph into the dense array format
+ * expected by the Leiden optimiser.
+ *
+ * Vendored from ngraph.leiden (MIT) — adapted for CodeGraph.
+ */
+// Typed arrays always return a number for in-bounds access, but noUncheckedIndexedAccess
+// widens the return to `number | undefined`. These helpers wrap compound assignment
+// patterns (+=, -=) that appear frequently in this performance-critical code.
+function taGet(a, i) {
+    return a[i];
+}
+function taAdd(a, i, v) {
+    a[i] = taGet(a, i) + v;
+}
+/**
+ * Populate edge arrays for a directed graph. Each edge is stored once in
+ * outEdges[from] and inEdges[to]. Self-loops are tracked in both the selfLoop
+ * array and the adjacency lists (partition.ts accounts for this).
+ */
+function populateDirectedEdges(graph, idToIndex, linkWeight, selfLoop, outEdges, inEdges, strengthOut, strengthIn) {
+    for (const [src, tgt, attrs] of graph.edges()) {
+        const from = idToIndex.get(src);
+        const to = idToIndex.get(tgt);
+        if (from == null || to == null)
+            continue;
+        const w = +linkWeight(attrs) || 0;
+        if (from === to) {
+            taAdd(selfLoop, from, w);
+            // Self-loop is intentionally kept in outEdges/inEdges as well.
+            // partition.ts's moveNodeToCommunity (directed path) accounts for this
+            // by subtracting selfLoopWeight once from outToOld+inFromOld to avoid
+            // triple-counting (see partition.ts moveNodeToCommunity directed block).
+        }
+        outEdges[from].push({ to, w });
+        inEdges[to].push({ from, w });
+        taAdd(strengthOut, from, w);
+        taAdd(strengthIn, to, w);
+    }
+}
+/**
+ * Populate edge arrays for an undirected graph. Reciprocal pairs are
+ * symmetrized and averaged to produce a single weight per undirected edge.
+ * Self-loops use single-w convention (matching modularity.ts formulas).
+ */
+function populateUndirectedEdges(graph, idToIndex, linkWeight, n, selfLoop, outEdges, inEdges, strengthOut, strengthIn) {
+    const pairAgg = new Map();
+    for (const [src, tgt, attrs] of graph.edges()) {
+        const a = idToIndex.get(src);
+        const b = idToIndex.get(tgt);
+        if (a == null || b == null)
+            continue;
+        const w = +linkWeight(attrs) || 0;
+        if (a === b) {
+            taAdd(selfLoop, a, w);
+            continue;
+        }
+        const i = a < b ? a : b;
+        const j = a < b ? b : a;
+        const key = `${i}:${j}`;
+        let rec = pairAgg.get(key);
+        if (!rec) {
+            rec = { sum: 0, seenAB: 0, seenBA: 0 };
+            pairAgg.set(key, rec);
+        }
+        rec.sum += w;
+        if (a === i)
+            rec.seenAB = 1;
+        else
+            rec.seenBA = 1;
+    }
+    for (const [key, rec] of pairAgg.entries()) {
+        const parts = key.split(':');
+        const i = +parts[0];
+        const j = +parts[1];
+        const dirCount = (rec.seenAB ? 1 : 0) + (rec.seenBA ? 1 : 0);
+        const w = dirCount > 0 ? rec.sum / dirCount : 0;
+        if (w === 0)
+            continue;
+        outEdges[i].push({ to: j, w });
+        outEdges[j].push({ to: i, w });
+        inEdges[i].push({ from: j, w });
+        inEdges[j].push({ from: i, w });
+        taAdd(strengthOut, i, w);
+        taAdd(strengthOut, j, w);
+        taAdd(strengthIn, i, w);
+        taAdd(strengthIn, j, w);
+    }
+    // Add self-loops into adjacency and strengths.
+    // Note: uses single-w convention (not standard 2w) — the modularity formulas in
+    // modularity.ts are written to match this convention, keeping the system self-consistent.
+    for (let v = 0; v < n; v++) {
+        const w = taGet(selfLoop, v);
+        if (w !== 0) {
+            outEdges[v].push({ to: v, w });
+            inEdges[v].push({ from: v, w });
+            taAdd(strengthOut, v, w);
+            taAdd(strengthIn, v, w);
+        }
+    }
+}
+export function makeGraphAdapter(graph, opts = {}) {
+    const linkWeight = opts.linkWeight || ((attrs) => (attrs && typeof attrs.weight === 'number' ? attrs.weight : 1));
+    const nodeSize = opts.nodeSize || ((attrs) => (attrs && typeof attrs.size === 'number' ? attrs.size : 1));
+    const directed = !!opts.directed;
+    const baseNodeIds = opts.baseNodeIds;
+    // Build dense node index mapping
+    const nodeIds = [];
+    const idToIndex = new Map();
+    if (Array.isArray(baseNodeIds) && baseNodeIds.length > 0) {
+        for (let i = 0; i < baseNodeIds.length; i++) {
+            const id = baseNodeIds[i];
+            if (!graph.hasNode(id))
+                throw new Error(`Missing node: ${id}`);
+            idToIndex.set(id, i);
+            nodeIds.push(id);
+        }
+    }
+    else {
+        for (const [id] of graph.nodes()) {
+            idToIndex.set(id, nodeIds.length);
+            nodeIds.push(id);
+        }
+    }
+    const n = nodeIds.length;
+    // Storage
+    const size = new Float64Array(n);
+    const selfLoop = new Float64Array(n);
+    const strengthOut = new Float64Array(n);
+    const strengthIn = new Float64Array(n);
+    // Edge list by source for fast iteration
+    const outEdges = new Array(n);
+    const inEdges = new Array(n);
+    for (let i = 0; i < n; i++) {
+        outEdges[i] = [];
+        inEdges[i] = [];
+    }
+    // Populate from graph
+    if (directed) {
+        populateDirectedEdges(graph, idToIndex, linkWeight, selfLoop, outEdges, inEdges, strengthOut, strengthIn);
+    }
+    else {
+        populateUndirectedEdges(graph, idToIndex, linkWeight, n, selfLoop, outEdges, inEdges, strengthOut, strengthIn);
+    }
+    // Node sizes
+    for (const [id, attrs] of graph.nodes()) {
+        const i = idToIndex.get(id);
+        if (i != null)
+            size[i] = +nodeSize(attrs) || 0;
+    }
+    // Totals
+    const totalWeight = strengthOut.reduce((a, b) => a + b, 0);
+    function forEachNeighbor(i, cb) {
+        const list = outEdges[i];
+        for (let k = 0; k < list.length; k++)
+            cb(list[k].to, list[k].w);
+    }
+    return {
+        n,
+        nodeIds,
+        idToIndex,
+        size,
+        selfLoop,
+        strengthOut,
+        strengthIn,
+        outEdges,
+        inEdges,
+        directed,
+        totalWeight,
+        forEachNeighbor,
+    };
+}
+//# sourceMappingURL=adapter.js.map