opencode-knowledge-work 0.0.0-stage → 0.1.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (472) hide show
  1. package/LICENSE +212 -0
  2. package/README.md +124 -2
  3. package/content/bio-research/.mcp.json +48 -0
  4. package/content/bio-research/CONNECTORS.md +23 -0
  5. package/content/bio-research/LICENSE +202 -0
  6. package/content/bio-research/README.md +83 -0
  7. package/content/bio-research/skills/bio-research-instrument-data-to-allotrope/LICENSE.txt +201 -0
  8. package/content/bio-research/skills/bio-research-instrument-data-to-allotrope/SKILL.md +280 -0
  9. package/content/bio-research/skills/bio-research-instrument-data-to-allotrope/references/asm_schema_overview.md +226 -0
  10. package/content/bio-research/skills/bio-research-instrument-data-to-allotrope/references/field_classification_guide.md +503 -0
  11. package/content/bio-research/skills/bio-research-instrument-data-to-allotrope/references/flattening_guide.md +254 -0
  12. package/content/bio-research/skills/bio-research-instrument-data-to-allotrope/references/supported_instruments.md +151 -0
  13. package/content/bio-research/skills/bio-research-instrument-data-to-allotrope/requirements.txt +26 -0
  14. package/content/bio-research/skills/bio-research-instrument-data-to-allotrope/scripts/convert_to_asm.py +543 -0
  15. package/content/bio-research/skills/bio-research-instrument-data-to-allotrope/scripts/export_parser.py +481 -0
  16. package/content/bio-research/skills/bio-research-instrument-data-to-allotrope/scripts/flatten_asm.py +254 -0
  17. package/content/bio-research/skills/bio-research-instrument-data-to-allotrope/scripts/validate_asm.py +1102 -0
  18. package/content/bio-research/skills/bio-research-nextflow-development/LICENSE.txt +201 -0
  19. package/content/bio-research/skills/bio-research-nextflow-development/SKILL.md +290 -0
  20. package/content/bio-research/skills/bio-research-nextflow-development/references/geo-sra-acquisition.md +416 -0
  21. package/content/bio-research/skills/bio-research-nextflow-development/references/installation.md +96 -0
  22. package/content/bio-research/skills/bio-research-nextflow-development/references/pipelines/atacseq.md +138 -0
  23. package/content/bio-research/skills/bio-research-nextflow-development/references/pipelines/rnaseq.md +118 -0
  24. package/content/bio-research/skills/bio-research-nextflow-development/references/pipelines/sarek.md +145 -0
  25. package/content/bio-research/skills/bio-research-nextflow-development/references/troubleshooting.md +137 -0
  26. package/content/bio-research/skills/bio-research-nextflow-development/scripts/check_environment.py +452 -0
  27. package/content/bio-research/skills/bio-research-nextflow-development/scripts/config/genomes.yaml +148 -0
  28. package/content/bio-research/skills/bio-research-nextflow-development/scripts/config/pipelines/atacseq.yaml +187 -0
  29. package/content/bio-research/skills/bio-research-nextflow-development/scripts/config/pipelines/rnaseq.yaml +147 -0
  30. package/content/bio-research/skills/bio-research-nextflow-development/scripts/config/pipelines/sarek.yaml +233 -0
  31. package/content/bio-research/skills/bio-research-nextflow-development/scripts/detect_data_type.py +300 -0
  32. package/content/bio-research/skills/bio-research-nextflow-development/scripts/generate_samplesheet.py +455 -0
  33. package/content/bio-research/skills/bio-research-nextflow-development/scripts/manage_genomes.py +521 -0
  34. package/content/bio-research/skills/bio-research-nextflow-development/scripts/sra_geo_fetch.py +732 -0
  35. package/content/bio-research/skills/bio-research-nextflow-development/scripts/utils/__init__.py +69 -0
  36. package/content/bio-research/skills/bio-research-nextflow-development/scripts/utils/file_discovery.py +189 -0
  37. package/content/bio-research/skills/bio-research-nextflow-development/scripts/utils/ncbi_utils.py +808 -0
  38. package/content/bio-research/skills/bio-research-nextflow-development/scripts/utils/sample_inference.py +290 -0
  39. package/content/bio-research/skills/bio-research-nextflow-development/scripts/utils/validators.py +256 -0
  40. package/content/bio-research/skills/bio-research-scientific-problem-selection/LICENSE.txt +201 -0
  41. package/content/bio-research/skills/bio-research-scientific-problem-selection/SKILL.md +269 -0
  42. package/content/bio-research/skills/bio-research-scientific-problem-selection/references/01-intuition-pumps.md +264 -0
  43. package/content/bio-research/skills/bio-research-scientific-problem-selection/references/02-risk-assessment.md +323 -0
  44. package/content/bio-research/skills/bio-research-scientific-problem-selection/references/03-optimization-function.md +481 -0
  45. package/content/bio-research/skills/bio-research-scientific-problem-selection/references/04-parameter-strategy.md +396 -0
  46. package/content/bio-research/skills/bio-research-scientific-problem-selection/references/05-decision-tree.md +85 -0
  47. package/content/bio-research/skills/bio-research-scientific-problem-selection/references/06-adversity-planning.md +123 -0
  48. package/content/bio-research/skills/bio-research-scientific-problem-selection/references/07-problem-inversion.md +152 -0
  49. package/content/bio-research/skills/bio-research-scientific-problem-selection/references/08-integration-synthesis.md +173 -0
  50. package/content/bio-research/skills/bio-research-scientific-problem-selection/references/09-meta-framework.md +504 -0
  51. package/content/bio-research/skills/bio-research-scvi-tools/LICENSE.txt +201 -0
  52. package/content/bio-research/skills/bio-research-scvi-tools/SKILL.md +155 -0
  53. package/content/bio-research/skills/bio-research-scvi-tools/references/atac_peakvi.md +398 -0
  54. package/content/bio-research/skills/bio-research-scvi-tools/references/batch_correction_sysvi.md +417 -0
  55. package/content/bio-research/skills/bio-research-scvi-tools/references/citeseq_totalvi.md +420 -0
  56. package/content/bio-research/skills/bio-research-scvi-tools/references/data_preparation.md +286 -0
  57. package/content/bio-research/skills/bio-research-scvi-tools/references/environment_setup.md +254 -0
  58. package/content/bio-research/skills/bio-research-scvi-tools/references/label_transfer.md +373 -0
  59. package/content/bio-research/skills/bio-research-scvi-tools/references/multiome_multivi.md +384 -0
  60. package/content/bio-research/skills/bio-research-scvi-tools/references/rna_velocity_velovi.md +410 -0
  61. package/content/bio-research/skills/bio-research-scvi-tools/references/scarches_mapping.md +401 -0
  62. package/content/bio-research/skills/bio-research-scvi-tools/references/scrna_integration.md +429 -0
  63. package/content/bio-research/skills/bio-research-scvi-tools/references/spatial_deconvolution.md +438 -0
  64. package/content/bio-research/skills/bio-research-scvi-tools/references/troubleshooting.md +420 -0
  65. package/content/bio-research/skills/bio-research-scvi-tools/scripts/cluster_embed.py +212 -0
  66. package/content/bio-research/skills/bio-research-scvi-tools/scripts/differential_expression.py +220 -0
  67. package/content/bio-research/skills/bio-research-scvi-tools/scripts/integrate_datasets.py +237 -0
  68. package/content/bio-research/skills/bio-research-scvi-tools/scripts/model_utils.py +634 -0
  69. package/content/bio-research/skills/bio-research-scvi-tools/scripts/prepare_data.py +169 -0
  70. package/content/bio-research/skills/bio-research-scvi-tools/scripts/train_model.py +370 -0
  71. package/content/bio-research/skills/bio-research-scvi-tools/scripts/transfer_labels.py +224 -0
  72. package/content/bio-research/skills/bio-research-scvi-tools/scripts/validate_adata.py +397 -0
  73. package/content/bio-research/skills/bio-research-single-cell-rna-qc/LICENSE.txt +201 -0
  74. package/content/bio-research/skills/bio-research-single-cell-rna-qc/SKILL.md +175 -0
  75. package/content/bio-research/skills/bio-research-single-cell-rna-qc/references/scverse_qc_guidelines.md +186 -0
  76. package/content/bio-research/skills/bio-research-single-cell-rna-qc/scripts/qc_analysis.py +232 -0
  77. package/content/bio-research/skills/bio-research-single-cell-rna-qc/scripts/qc_core.py +233 -0
  78. package/content/bio-research/skills/bio-research-single-cell-rna-qc/scripts/qc_plotting.py +235 -0
  79. package/content/bio-research/skills/bio-research-start/SKILL.md +79 -0
  80. package/content/customer-support/.mcp.json +40 -0
  81. package/content/customer-support/CONNECTORS.md +19 -0
  82. package/content/customer-support/LICENSE +202 -0
  83. package/content/customer-support/README.md +140 -0
  84. package/content/customer-support/skills/customer-support-customer-escalation/SKILL.md +248 -0
  85. package/content/customer-support/skills/customer-support-customer-research/SKILL.md +252 -0
  86. package/content/customer-support/skills/customer-support-draft-response/SKILL.md +418 -0
  87. package/content/customer-support/skills/customer-support-kb-article/SKILL.md +351 -0
  88. package/content/customer-support/skills/customer-support-ticket-triage/SKILL.md +275 -0
  89. package/content/data/.mcp.json +36 -0
  90. package/content/data/CONNECTORS.md +18 -0
  91. package/content/data/LICENSE +202 -0
  92. package/content/data/README.md +121 -0
  93. package/content/data/skills/data-analyze/SKILL.md +119 -0
  94. package/content/data/skills/data-build-dashboard/SKILL.md +924 -0
  95. package/content/data/skills/data-create-viz/SKILL.md +154 -0
  96. package/content/data/skills/data-data-context-extractor/SKILL.md +227 -0
  97. package/content/data/skills/data-data-context-extractor/references/domain-template.md +147 -0
  98. package/content/data/skills/data-data-context-extractor/references/example-output.md +198 -0
  99. package/content/data/skills/data-data-context-extractor/references/skill-template.md +148 -0
  100. package/content/data/skills/data-data-context-extractor/references/sql-dialects.md +121 -0
  101. package/content/data/skills/data-data-context-extractor/scripts/package_data_skill.py +126 -0
  102. package/content/data/skills/data-data-visualization/SKILL.md +305 -0
  103. package/content/data/skills/data-explore-data/SKILL.md +325 -0
  104. package/content/data/skills/data-sql-queries/SKILL.md +428 -0
  105. package/content/data/skills/data-statistical-analysis/SKILL.md +245 -0
  106. package/content/data/skills/data-validate-data/SKILL.md +383 -0
  107. package/content/data/skills/data-write-query/SKILL.md +122 -0
  108. package/content/design/.mcp.json +44 -0
  109. package/content/design/CONNECTORS.md +18 -0
  110. package/content/design/README.md +117 -0
  111. package/content/design/skills/design-accessibility-review/SKILL.md +128 -0
  112. package/content/design/skills/design-design-critique/SKILL.md +118 -0
  113. package/content/design/skills/design-design-handoff/SKILL.md +131 -0
  114. package/content/design/skills/design-design-system/SKILL.md +190 -0
  115. package/content/design/skills/design-research-synthesis/SKILL.md +92 -0
  116. package/content/design/skills/design-user-research/SKILL.md +41 -0
  117. package/content/design/skills/design-ux-copy/SKILL.md +107 -0
  118. package/content/engineering/.mcp.json +48 -0
  119. package/content/engineering/CONNECTORS.md +19 -0
  120. package/content/engineering/README.md +136 -0
  121. package/content/engineering/skills/engineering-architecture/SKILL.md +85 -0
  122. package/content/engineering/skills/engineering-code-review/SKILL.md +118 -0
  123. package/content/engineering/skills/engineering-debug/SKILL.md +95 -0
  124. package/content/engineering/skills/engineering-deploy-checklist/SKILL.md +78 -0
  125. package/content/engineering/skills/engineering-documentation/SKILL.md +49 -0
  126. package/content/engineering/skills/engineering-incident-response/SKILL.md +158 -0
  127. package/content/engineering/skills/engineering-standup/SKILL.md +75 -0
  128. package/content/engineering/skills/engineering-system-design/SKILL.md +42 -0
  129. package/content/engineering/skills/engineering-tech-debt/SKILL.md +32 -0
  130. package/content/engineering/skills/engineering-testing-strategy/SKILL.md +33 -0
  131. package/content/enterprise-search/.mcp.json +36 -0
  132. package/content/enterprise-search/CONNECTORS.md +21 -0
  133. package/content/enterprise-search/LICENSE +202 -0
  134. package/content/enterprise-search/README.md +157 -0
  135. package/content/enterprise-search/skills/enterprise-search-digest/SKILL.md +173 -0
  136. package/content/enterprise-search/skills/enterprise-search-knowledge-synthesis/SKILL.md +258 -0
  137. package/content/enterprise-search/skills/enterprise-search-search/SKILL.md +178 -0
  138. package/content/enterprise-search/skills/enterprise-search-search-strategy/SKILL.md +222 -0
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  140. package/content/finance/.mcp.json +32 -0
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  143. package/content/finance/README.md +92 -0
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  147. package/content/finance/skills/finance-journal-entry/SKILL.md +131 -0
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  150. package/content/finance/skills/finance-sox-testing/SKILL.md +218 -0
  151. package/content/finance/skills/finance-variance-analysis/SKILL.md +266 -0
  152. package/content/human-resources/.mcp.json +28 -0
  153. package/content/human-resources/CONNECTORS.md +19 -0
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  159. package/content/human-resources/skills/human-resources-org-planning/SKILL.md +28 -0
  160. package/content/human-resources/skills/human-resources-people-report/SKILL.md +99 -0
  161. package/content/human-resources/skills/human-resources-performance-review/SKILL.md +149 -0
  162. package/content/human-resources/skills/human-resources-policy-lookup/SKILL.md +94 -0
  163. package/content/human-resources/skills/human-resources-recruiting-pipeline/SKILL.md +31 -0
  164. package/content/legal/.mcp.json +36 -0
  165. package/content/legal/CONNECTORS.md +21 -0
  166. package/content/legal/LICENSE +202 -0
  167. package/content/legal/README.md +234 -0
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  169. package/content/legal/skills/legal-compliance-check/SKILL.md +274 -0
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  471. package/index.ts +84 -0
  472. package/package.json +30 -3
@@ -0,0 +1,178 @@
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+ ---
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+ name: search
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+ description: Search across all connected sources in one query. Trigger with "find that doc about...", "what did we decide on...", "where was the conversation about...", or when looking for a decision, document, or discussion that could live in chat, email, cloud storage, or a project tracker.
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+ argument-hint: "<query>"
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+ ---
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+
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+ # Search Command
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+
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+ > If you see unfamiliar placeholders or need to check which tools are connected, see [CONNECTORS.md](../../CONNECTORS.md).
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+
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+ Search across all connected MCP sources in a single query. Decompose the user's question, run parallel searches, and synthesize results.
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+
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+ ## Instructions
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+
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+ ### 1. Check Available Sources
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+
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+ Before searching, determine which MCP sources are available. Attempt to identify connected tools from the available tool list. Common sources:
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+
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+ - **~~chat** — chat platform tools
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+ - **~~email** — email tools
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+ - **~~cloud storage** — cloud storage tools
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+ - **~~project tracker** — project tracking tools
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+ - **~~CRM** — CRM tools
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+ - **~~knowledge base** — knowledge base tools
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+
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+ If no MCP sources are connected:
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+ ```
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+ To search across your tools, you'll need to connect at least one source.
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+ Check your MCP settings to add ~~chat, ~~email, ~~cloud storage, or other tools.
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+
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+ Supported sources: ~~chat, ~~email, ~~cloud storage, ~~project tracker, ~~CRM, ~~knowledge base,
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+ and any other MCP-connected service.
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+ ```
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+
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+ ### 2. Parse the User's Query
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+
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+ Analyze the search query to understand:
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+
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+ - **Intent**: What is the user looking for? (a decision, a document, a person, a status update, a conversation)
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+ - **Entities**: People, projects, teams, tools mentioned
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+ - **Time constraints**: Recency signals ("this week", "last month", specific dates)
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+ - **Source hints**: References to specific tools ("in ~~chat", "that email", "the doc")
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+ - **Filters**: Extract explicit filters from the query:
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+ - `from:` — Filter by sender/author
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+ - `in:` — Filter by channel, folder, or location
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+ - `after:` — Only results after this date
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+ - `before:` — Only results before this date
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+ - `type:` — Filter by content type (message, email, doc, thread, file)
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+
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+ ### 3. Decompose into Sub-Queries
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+
52
+ For each available source, create a targeted sub-query using that source's native search syntax:
53
+
54
+ **~~chat:**
55
+ - Use available search and read tools for your chat platform
56
+ - Translate filters: `from:` maps to sender, `in:` maps to channel/room, dates map to time range filters
57
+ - Use natural language queries for semantic search when appropriate
58
+ - Use keyword queries for exact matches
59
+
60
+ **~~email:**
61
+ - Use available email search tools
62
+ - Translate filters: `from:` maps to sender, dates map to time range filters
63
+ - Map `type:` to attachment filters or subject-line searches as appropriate
64
+
65
+ **~~cloud storage:**
66
+ - Use available file search tools
67
+ - Translate to file query syntax: name contains, full text contains, modified date, file type
68
+ - Consider both file names and content
69
+
70
+ **~~project tracker:**
71
+ - Use available task search or typeahead tools
72
+ - Map to task text search, assignee filters, date filters, project filters
73
+
74
+ **~~CRM:**
75
+ - Use available CRM query tools
76
+ - Search across Account, Contact, Opportunity, and other relevant objects
77
+
78
+ **~~knowledge base:**
79
+ - Use semantic search for conceptual questions
80
+ - Use keyword search for exact matches
81
+
82
+ ### 4. Execute Searches in Parallel
83
+
84
+ Run all sub-queries simultaneously across available sources. Do not wait for one source before searching another.
85
+
86
+ For each source:
87
+ - Execute the translated query
88
+ - Capture results with metadata (timestamps, authors, links, source type)
89
+ - Note any sources that fail or return errors — do not let one failure block others
90
+
91
+ ### 5. Rank and Deduplicate Results
92
+
93
+ **Deduplication:**
94
+ - Identify the same information appearing across sources (e.g., a decision discussed in ~~chat AND confirmed via email)
95
+ - Group related results together rather than showing duplicates
96
+ - Prefer the most authoritative or complete version
97
+
98
+ **Ranking factors:**
99
+ - **Relevance**: How well does the result match the query intent?
100
+ - **Freshness**: More recent results rank higher for status/decision queries
101
+ - **Authority**: Official docs > wiki > chat messages for factual questions; conversations > docs for "what did we discuss" queries
102
+ - **Completeness**: Results with more context rank higher
103
+
104
+ ### 6. Present Unified Results
105
+
106
+ Format the response as a synthesized answer, not a raw list of results:
107
+
108
+ **For factual/decision queries:**
109
+ ```
110
+ [Direct answer to the question]
111
+
112
+ Sources:
113
+ - [Source 1: brief description] (~~chat, #channel, date)
114
+ - [Source 2: brief description] (~~email, from person, date)
115
+ - [Source 3: brief description] (~~cloud storage, doc name, last modified)
116
+ ```
117
+
118
+ **For exploratory queries ("what do we know about X"):**
119
+ ```
120
+ [Synthesized summary combining information from all sources]
121
+
122
+ Found across:
123
+ - ~~chat: X relevant messages in Y channels
124
+ - ~~email: X relevant threads
125
+ - ~~cloud storage: X related documents
126
+ - [Other sources as applicable]
127
+
128
+ Key sources:
129
+ - [Most important source with link/reference]
130
+ - [Second most important source]
131
+ ```
132
+
133
+ **For "find" queries (looking for a specific thing):**
134
+ ```
135
+ [The thing they're looking for, with direct reference]
136
+
137
+ Also found:
138
+ - [Related items from other sources]
139
+ ```
140
+
141
+ ### 7. Handle Edge Cases
142
+
143
+ **Ambiguous queries:**
144
+ If the query could mean multiple things, ask one clarifying question before searching:
145
+ ```
146
+ "API redesign" could refer to a few things. Are you looking for:
147
+ 1. The REST API v2 redesign (Project Aurora)
148
+ 2. The internal SDK API changes
149
+ 3. Something else?
150
+ ```
151
+
152
+ **No results:**
153
+ ```
154
+ I couldn't find anything matching "[query]" across [list of sources searched].
155
+
156
+ Try:
157
+ - Broader terms (e.g., "database" instead of "PostgreSQL migration")
158
+ - Different time range (currently searching [time range])
159
+ - Checking if the relevant source is connected (currently searching: [sources])
160
+ ```
161
+
162
+ **Partial results (some sources failed):**
163
+ ```
164
+ [Results from successful sources]
165
+
166
+ Note: I couldn't reach [failed source(s)] during this search.
167
+ Results above are from [successful sources] only.
168
+ ```
169
+
170
+ ## Notes
171
+
172
+ - Always search multiple sources in parallel — never sequentially
173
+ - Synthesize results into answers, do not just list raw search results
174
+ - Include source attribution so users can dig deeper
175
+ - Respect the user's filter syntax and apply it appropriately per source
176
+ - When a query mentions a specific person, search for their messages/docs/mentions across all sources
177
+ - For time-sensitive queries, prioritize recency in ranking
178
+ - If only one source is connected, still provide useful results from that source
@@ -0,0 +1,222 @@
1
+ ---
2
+ name: search-strategy
3
+ description: Query decomposition and multi-source search orchestration. Breaks natural language questions into targeted searches per source, translates queries into source-specific syntax, ranks results by relevance, and handles ambiguity and fallback strategies.
4
+ user-invocable: false
5
+ ---
6
+
7
+ # Search Strategy
8
+
9
+ > If you see unfamiliar placeholders or need to check which tools are connected, see [CONNECTORS.md](../../CONNECTORS.md).
10
+
11
+ The core intelligence behind enterprise search. Transforms a single natural language question into parallel, source-specific searches and produces ranked, deduplicated results.
12
+
13
+ ## The Goal
14
+
15
+ Turn this:
16
+ ```
17
+ "What did we decide about the API migration timeline?"
18
+ ```
19
+
20
+ Into targeted searches across every connected source:
21
+ ```
22
+ ~~chat: "API migration timeline decision" (semantic) + "API migration" in:#engineering after:2025-01-01
23
+ ~~knowledge base: semantic search "API migration timeline decision"
24
+ ~~project tracker: text search "API migration" in relevant workspace
25
+ ```
26
+
27
+ Then synthesize the results into a single coherent answer.
28
+
29
+ ## Query Decomposition
30
+
31
+ ### Step 1: Identify Query Type
32
+
33
+ Classify the user's question to determine search strategy:
34
+
35
+ | Query Type | Example | Strategy |
36
+ |-----------|---------|----------|
37
+ | **Decision** | "What did we decide about X?" | Prioritize conversations (~~chat, email), look for conclusion signals |
38
+ | **Status** | "What's the status of Project Y?" | Prioritize recent activity, task trackers, status updates |
39
+ | **Document** | "Where's the spec for Z?" | Prioritize Drive, wiki, shared docs |
40
+ | **Person** | "Who's working on X?" | Search task assignments, message authors, doc collaborators |
41
+ | **Factual** | "What's our policy on X?" | Prioritize wiki, official docs, then confirmatory conversations |
42
+ | **Temporal** | "When did X happen?" | Search with broad date range, look for timestamps |
43
+ | **Exploratory** | "What do we know about X?" | Broad search across all sources, synthesize |
44
+
45
+ ### Step 2: Extract Search Components
46
+
47
+ From the query, extract:
48
+
49
+ - **Keywords**: Core terms that must appear in results
50
+ - **Entities**: People, projects, teams, tools (use memory system if available)
51
+ - **Intent signals**: Decision words, status words, temporal markers
52
+ - **Constraints**: Time ranges, source hints, author filters
53
+ - **Negations**: Things to exclude
54
+
55
+ ### Step 3: Generate Sub-Queries Per Source
56
+
57
+ For each available source, create one or more targeted queries:
58
+
59
+ **Prefer semantic search** for:
60
+ - Conceptual questions ("What do we think about...")
61
+ - Questions where exact keywords are unknown
62
+ - Exploratory queries
63
+
64
+ **Prefer keyword search** for:
65
+ - Known terms, project names, acronyms
66
+ - Exact phrases the user quoted
67
+ - Filter-heavy queries (from:, in:, after:)
68
+
69
+ **Generate multiple query variants** when the topic might be referred to differently:
70
+ ```
71
+ User: "Kubernetes setup"
72
+ Queries: "Kubernetes", "k8s", "cluster", "container orchestration"
73
+ ```
74
+
75
+ ## Source-Specific Query Translation
76
+
77
+ ### ~~chat
78
+
79
+ **Semantic search** (natural language questions):
80
+ ```
81
+ query: "What is the status of project aurora?"
82
+ ```
83
+
84
+ **Keyword search:**
85
+ ```
86
+ query: "project aurora status update"
87
+ query: "aurora in:#engineering after:2025-01-15"
88
+ query: "from:<@UserID> aurora"
89
+ ```
90
+
91
+ **Filter mapping:**
92
+ | Enterprise filter | ~~chat syntax |
93
+ |------------------|--------------|
94
+ | `from:sarah` | `from:sarah` or `from:<@USERID>` |
95
+ | `in:engineering` | `in:engineering` |
96
+ | `after:2025-01-01` | `after:2025-01-01` |
97
+ | `before:2025-02-01` | `before:2025-02-01` |
98
+ | `type:thread` | `is:thread` |
99
+ | `type:file` | `has:file` |
100
+
101
+ ### ~~knowledge base (Wiki)
102
+
103
+ **Semantic search** — Use for conceptual queries:
104
+ ```
105
+ descriptive_query: "API migration timeline and decision rationale"
106
+ ```
107
+
108
+ **Keyword search** — Use for exact terms:
109
+ ```
110
+ query: "API migration"
111
+ query: "\"API migration timeline\"" (exact phrase)
112
+ ```
113
+
114
+ ### ~~project tracker
115
+
116
+ **Task search:**
117
+ ```
118
+ text: "API migration"
119
+ workspace: [workspace_id]
120
+ completed: false (for status queries)
121
+ assignee_any: "me" (for "my tasks" queries)
122
+ ```
123
+
124
+ **Filter mapping:**
125
+ | Enterprise filter | ~~project tracker parameter |
126
+ |------------------|----------------|
127
+ | `from:sarah` | `assignee_any` or `created_by_any` |
128
+ | `after:2025-01-01` | `modified_on_after: "2025-01-01"` |
129
+ | `type:milestone` | `resource_subtype: "milestone"` |
130
+
131
+ ## Result Ranking
132
+
133
+ ### Relevance Scoring
134
+
135
+ Score each result on these factors (weighted by query type):
136
+
137
+ | Factor | Weight (Decision) | Weight (Status) | Weight (Document) | Weight (Factual) |
138
+ |--------|-------------------|------------------|--------------------|-------------------|
139
+ | Keyword match | 0.3 | 0.2 | 0.4 | 0.3 |
140
+ | Freshness | 0.3 | 0.4 | 0.2 | 0.1 |
141
+ | Authority | 0.2 | 0.1 | 0.3 | 0.4 |
142
+ | Completeness | 0.2 | 0.3 | 0.1 | 0.2 |
143
+
144
+ ### Authority Hierarchy
145
+
146
+ Depends on query type:
147
+
148
+ **For factual/policy questions:**
149
+ ```
150
+ Wiki/Official docs > Shared documents > Email announcements > Chat messages
151
+ ```
152
+
153
+ **For "what happened" / decision questions:**
154
+ ```
155
+ Meeting notes > Thread conclusions > Email confirmations > Chat messages
156
+ ```
157
+
158
+ **For status questions:**
159
+ ```
160
+ Task tracker > Recent chat > Status docs > Email updates
161
+ ```
162
+
163
+ ## Handling Ambiguity
164
+
165
+ When a query is ambiguous, prefer asking one focused clarifying question over guessing:
166
+
167
+ ```
168
+ Ambiguous: "search for the migration"
169
+ → "I found references to a few migrations. Are you looking for:
170
+ 1. The database migration (Project Phoenix)
171
+ 2. The cloud migration (AWS → GCP)
172
+ 3. The email migration (Exchange → O365)"
173
+ ```
174
+
175
+ Only ask for clarification when:
176
+ - There are genuinely distinct interpretations that would produce very different results
177
+ - The ambiguity would significantly affect which sources to search
178
+
179
+ Do NOT ask for clarification when:
180
+ - The query is clear enough to produce useful results
181
+ - Minor ambiguity can be resolved by returning results from multiple interpretations
182
+
183
+ ## Fallback Strategies
184
+
185
+ When a source is unavailable or returns no results:
186
+
187
+ 1. **Source unavailable**: Skip it, search remaining sources, note the gap
188
+ 2. **No results from a source**: Try broader query terms, remove date filters, try alternate keywords
189
+ 3. **All sources return nothing**: Suggest query modifications to the user
190
+ 4. **Rate limited**: Note the limitation, return results from other sources, suggest retrying later
191
+
192
+ ### Query Broadening
193
+
194
+ If initial queries return too few results:
195
+ ```
196
+ Original: "PostgreSQL migration Q2 timeline decision"
197
+ Broader: "PostgreSQL migration"
198
+ Broader: "database migration"
199
+ Broadest: "migration"
200
+ ```
201
+
202
+ Remove constraints in this order:
203
+ 1. Date filters (search all time)
204
+ 2. Source/location filters
205
+ 3. Less important keywords
206
+ 4. Keep only core entity/topic terms
207
+
208
+ ## Parallel Execution
209
+
210
+ Always execute searches across sources in parallel, never sequentially. The total search time should be roughly equal to the slowest single source, not the sum of all sources.
211
+
212
+ ```
213
+ [User query]
214
+ ↓ decompose
215
+ [~~chat query] [~~email query] [~~cloud storage query] [Wiki query] [~~project tracker query]
216
+ ↓ ↓ ↓ ↓ ↓
217
+ (parallel execution)
218
+ ↓
219
+ [Merge + Rank + Deduplicate]
220
+ ↓
221
+ [Synthesized answer]
222
+ ```
@@ -0,0 +1,173 @@
1
+ ---
2
+ name: source-management
3
+ description: Manages connected MCP sources for enterprise search. Detects available sources, guides users to connect new ones, handles source priority ordering, and manages rate limiting awareness.
4
+ user-invocable: false
5
+ ---
6
+
7
+ # Source Management
8
+
9
+ > If you see unfamiliar placeholders or need to check which tools are connected, see [CONNECTORS.md](../../CONNECTORS.md).
10
+
11
+ Knows what sources are available, helps connect new ones, and manages how sources are queried.
12
+
13
+ ## Checking Available Sources
14
+
15
+ Determine which MCP sources are connected by checking available tools. Each source corresponds to a set of MCP tools:
16
+
17
+ | Source | Key capabilities |
18
+ |--------|-----------------|
19
+ | **~~chat** | Search messages, read channels and threads |
20
+ | **~~email** | Search messages, read individual emails |
21
+ | **~~cloud storage** | Search files, fetch document contents |
22
+ | **~~project tracker** | Search tasks, typeahead search |
23
+ | **~~CRM** | Query records (accounts, contacts, opportunities) |
24
+ | **~~knowledge base** | Semantic search, keyword search |
25
+
26
+ If a tool prefix is available, the source is connected and searchable.
27
+
28
+ ## Guiding Users to Connect Sources
29
+
30
+ When a user searches but has few or no sources connected:
31
+
32
+ ```
33
+ You currently have [N] source(s) connected: [list].
34
+
35
+ To expand your search, you can connect additional sources in your MCP settings:
36
+ - ~~chat — messages, threads, channels
37
+ - ~~email — emails, conversations, attachments
38
+ - ~~cloud storage — docs, sheets, slides
39
+ - ~~project tracker — tasks, projects, milestones
40
+ - ~~CRM — accounts, contacts, opportunities
41
+ - ~~knowledge base — wiki pages, knowledge base articles
42
+
43
+ The more sources you connect, the more complete your search results.
44
+ ```
45
+
46
+ When a user asks about a specific tool that is not connected:
47
+
48
+ ```
49
+ [Tool name] isn't currently connected. To add it:
50
+ 1. Open your MCP settings
51
+ 2. Add the [tool] MCP server configuration
52
+ 3. Authenticate when prompted
53
+
54
+ Once connected, it will be automatically included in future searches.
55
+ ```
56
+
57
+ ## Source Priority Ordering
58
+
59
+ Different query types benefit from searching certain sources first. Use these priorities to weight results, not to skip sources:
60
+
61
+ ### By Query Type
62
+
63
+ **Decision queries** ("What did we decide..."):
64
+ ```
65
+ 1. ~~chat (conversations where decisions happen)
66
+ 2. ~~email (decision confirmations, announcements)
67
+ 3. ~~cloud storage (meeting notes, decision logs)
68
+ 4. Wiki (if decisions are documented)
69
+ 5. Task tracker (if decisions are captured in tasks)
70
+ ```
71
+
72
+ **Status queries** ("What's the status of..."):
73
+ ```
74
+ 1. Task tracker (~~project tracker — authoritative status)
75
+ 2. ~~chat (real-time discussion)
76
+ 3. ~~cloud storage (status docs, reports)
77
+ 4. ~~email (status update emails)
78
+ 5. Wiki (project pages)
79
+ ```
80
+
81
+ **Document queries** ("Where's the doc for..."):
82
+ ```
83
+ 1. ~~cloud storage (primary doc storage)
84
+ 2. Wiki / ~~knowledge base (knowledge base)
85
+ 3. ~~email (docs shared via email)
86
+ 4. ~~chat (docs shared in channels)
87
+ 5. Task tracker (docs linked to tasks)
88
+ ```
89
+
90
+ **People queries** ("Who works on..." / "Who knows about..."):
91
+ ```
92
+ 1. ~~chat (message authors, channel members)
93
+ 2. Task tracker (task assignees)
94
+ 3. ~~cloud storage (doc authors, collaborators)
95
+ 4. ~~CRM (account owners, contacts)
96
+ 5. ~~email (email participants)
97
+ ```
98
+
99
+ **Factual/Policy queries** ("What's our policy on..."):
100
+ ```
101
+ 1. Wiki / ~~knowledge base (official documentation)
102
+ 2. ~~cloud storage (policy docs, handbooks)
103
+ 3. ~~email (policy announcements)
104
+ 4. ~~chat (policy discussions)
105
+ ```
106
+
107
+ ### Default Priority (General Queries)
108
+
109
+ When query type is unclear:
110
+ ```
111
+ 1. ~~chat (highest volume, most real-time)
112
+ 2. ~~email (formal communications)
113
+ 3. ~~cloud storage (documents and files)
114
+ 4. Wiki / ~~knowledge base (structured knowledge)
115
+ 5. Task tracker (work items)
116
+ 6. CRM (customer data)
117
+ ```
118
+
119
+ ## Rate Limiting Awareness
120
+
121
+ MCP sources may have rate limits. Handle them gracefully:
122
+
123
+ ### Detection
124
+
125
+ Rate limit responses typically appear as:
126
+ - HTTP 429 responses
127
+ - Error messages mentioning "rate limit", "too many requests", or "quota exceeded"
128
+ - Throttled or delayed responses
129
+
130
+ ### Handling
131
+
132
+ When a source is rate limited:
133
+
134
+ 1. **Do not retry immediately** — respect the limit
135
+ 2. **Continue with other sources** — do not block the entire search
136
+ 3. **Inform the user**:
137
+ ```
138
+ Note: [Source] is temporarily rate limited. Results below are from
139
+ [other sources]. You can retry in a few minutes to include [source].
140
+ ```
141
+ 4. **For digests** — if rate limited mid-scan, note which time range was covered before the limit hit
142
+
143
+ ### Prevention
144
+
145
+ - Avoid unnecessary API calls — check if the source is likely to have relevant results before querying
146
+ - Use targeted queries over broad scans when possible
147
+ - For digests, batch requests where the API supports it
148
+ - Cache awareness: if a search was just run, avoid re-running the same query immediately
149
+
150
+ ## Source Health
151
+
152
+ Track source availability during a session:
153
+
154
+ ```
155
+ Source Status:
156
+ ~~chat: ✓ Available
157
+ ~~email: ✓ Available
158
+ ~~cloud storage: ✓ Available
159
+ ~~project tracker: ✗ Not connected
160
+ ~~CRM: ✗ Not connected
161
+ ~~knowledge base: ⚠ Rate limited (retry in 2 min)
162
+ ```
163
+
164
+ When reporting search results, include which sources were searched so the user knows the scope of the answer.
165
+
166
+ ## Adding Custom Sources
167
+
168
+ The enterprise search plugin works with any MCP-connected source. As new MCP servers become available, they can be added to the `.mcp.json` configuration. The search and digest commands will automatically detect and include new sources based on available tools.
169
+
170
+ To add a new source:
171
+ 1. Add the MCP server configuration to `.mcp.json`
172
+ 2. Authenticate if required
173
+ 3. The source will be included in subsequent searches automatically
@@ -0,0 +1,32 @@
1
+ {
2
+ "mcpServers": {
3
+ "snowflake": {
4
+ "type": "http",
5
+ "url": ""
6
+ },
7
+ "databricks": {
8
+ "type": "http",
9
+ "url": ""
10
+ },
11
+ "bigquery": {
12
+ "type": "http",
13
+ "url": "https://bigquery.googleapis.com/mcp"
14
+ },
15
+ "slack": {
16
+ "type": "http",
17
+ "url": "https://mcp.slack.com/mcp",
18
+ "oauth": {
19
+ "clientId": "1601185624273.8899143856786",
20
+ "callbackPort": 3118
21
+ }
22
+ },
23
+ "google calendar": {
24
+ "type": "http",
25
+ "url": ""
26
+ },
27
+ "gmail": {
28
+ "type": "http",
29
+ "url": ""
30
+ }
31
+ }
32
+ }
@@ -0,0 +1,20 @@
1
+ # Connectors
2
+
3
+ ## How tool references work
4
+
5
+ Plugin files use `~~category` as a placeholder for whatever tool the user connects in that category. For example, `~~data warehouse` might mean Snowflake, BigQuery, or any other warehouse with an MCP server.
6
+
7
+ Plugins are **tool-agnostic** — they describe workflows in terms of categories (data warehouse, chat, project tracker, etc.) rather than specific products. The `.mcp.json` pre-configures specific MCP servers, but any MCP server in that category works.
8
+
9
+ ## Connectors for this plugin
10
+
11
+ | Category | Placeholder | Included servers | Other options |
12
+ |----------|-------------|-----------------|---------------|
13
+ | Data warehouse | `~~data warehouse` | Snowflake\*, Databricks\*, BigQuery | Redshift, PostgreSQL |
14
+ | Email | `~~email` | Microsoft 365 | — |
15
+ | Office suite | `~~office suite` | Microsoft 365 | — |
16
+ | Chat | `~~chat` | Slack | Microsoft Teams |
17
+ | ERP / Accounting | `~~erp` | — (no supported MCP servers yet) | NetSuite, SAP, QuickBooks, Xero |
18
+ | Analytics / BI | `~~analytics` | — (no supported MCP servers yet) | Tableau, Looker, Power BI |
19
+
20
+ \* Placeholder — MCP URL not yet configured