okstra 0.113.0 → 0.115.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (348) hide show
  1. package/README.kr.md +2 -2
  2. package/README.md +2 -2
  3. package/docs/for-ai/README.md +2 -2
  4. package/docs/for-ai/skills/{okstra-brief.md → okstra-brief-gen.md} +3 -3
  5. package/docs/for-ai/skills/okstra-inspect.md +1 -1
  6. package/docs/kr/architecture.md +11 -11
  7. package/docs/kr/cli.md +1 -1
  8. package/docs/kr/follow-ups/2026-07-10-final-report-option-3.md +51 -0
  9. package/docs/project-structure-overview.md +2 -2
  10. package/package.json +1 -1
  11. package/runtime/BUILD.json +2 -2
  12. package/runtime/agents/workers/report-writer-worker.md +1 -0
  13. package/runtime/prompts/lead/context-loader.md +2 -2
  14. package/runtime/prompts/lead/okstra-lead-contract.md +1 -1
  15. package/runtime/prompts/profiles/_common-contract.md +3 -3
  16. package/runtime/prompts/profiles/implementation-planning.md +1 -1
  17. package/runtime/prompts/profiles/requirements-discovery.md +2 -2
  18. package/runtime/python/okstra_ctl/fix_cycles.py +1 -1
  19. package/runtime/python/okstra_ctl/implementation_stage.py +46 -39
  20. package/runtime/python/okstra_ctl/report_views.py +151 -12
  21. package/runtime/python/okstra_ctl/run.py +24 -24
  22. package/runtime/python/okstra_ctl/wizard.py +3 -3
  23. package/runtime/python/okstra_ctl/worktree.py +1 -1
  24. package/runtime/python/okstra_token_usage/claude.py +58 -19
  25. package/runtime/python/okstra_token_usage/collect.py +3 -1
  26. package/runtime/python/okstra_vendor/__init__.py +3 -0
  27. package/runtime/schemas/final-report-v1.0.schema.json +20 -0
  28. package/runtime/skills/{okstra-brief → okstra-brief-gen}/SKILL.md +6 -6
  29. package/runtime/skills/{okstra-brief → okstra-brief-gen}/references/reporter-confirmations.md +1 -1
  30. package/runtime/skills/{okstra-brief → okstra-brief-gen}/references/tracker-recursion.md +1 -1
  31. package/runtime/skills/okstra-inspect/SKILL.md +2 -2
  32. package/runtime/templates/reports/brief.template.md +2 -2
  33. package/runtime/templates/reports/final-report.template.md +14 -0
  34. package/runtime/templates/reports/i18n/en.json +23 -12
  35. package/runtime/templates/reports/i18n/ko.json +23 -12
  36. package/runtime/templates/reports/report.css +55 -0
  37. package/runtime/templates/reports/report.js +53 -1
  38. package/runtime/validators/validate-brief.py +5 -5
  39. package/runtime/validators/validate-brief.sh +1 -1
  40. package/src/commands/lifecycle/uninstall.mjs +2 -1
  41. package/src/lib/skill-catalog.mjs +2 -1
  42. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/__init__.py +0 -0
  43. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_approx_clust_coeff.py +0 -41
  44. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_clique.py +0 -112
  45. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_connectivity.py +0 -199
  46. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_density.py +0 -146
  47. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_distance_measures.py +0 -59
  48. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_dominating_set.py +0 -78
  49. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_kcomponents.py +0 -303
  50. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_matching.py +0 -8
  51. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_maxcut.py +0 -94
  52. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_ramsey.py +0 -31
  53. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_steinertree.py +0 -306
  54. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_traveling_salesman.py +0 -1014
  55. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_treewidth.py +0 -274
  56. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_vertex_cover.py +0 -68
  57. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/__init__.py +0 -0
  58. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/base_test.py +0 -81
  59. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_connectivity.py +0 -143
  60. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_correlation.py +0 -122
  61. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_mixing.py +0 -174
  62. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_neighbor_degree.py +0 -107
  63. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_pairs.py +0 -87
  64. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/__init__.py +0 -0
  65. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_basic.py +0 -125
  66. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_centrality.py +0 -192
  67. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_cluster.py +0 -84
  68. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_covering.py +0 -33
  69. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_edgelist.py +0 -240
  70. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_extendability.py +0 -334
  71. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_generators.py +0 -407
  72. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_link_analysis.py +0 -218
  73. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_matching.py +0 -327
  74. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_matrix.py +0 -138
  75. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_project.py +0 -409
  76. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_redundancy.py +0 -35
  77. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_spectral_bipartivity.py +0 -80
  78. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/__init__.py +0 -0
  79. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_betweenness_centrality.py +0 -923
  80. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_betweenness_centrality_subset.py +0 -354
  81. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_closeness_centrality.py +0 -274
  82. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_current_flow_betweenness_centrality.py +0 -259
  83. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_current_flow_betweenness_centrality_subset.py +0 -147
  84. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_current_flow_closeness.py +0 -43
  85. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_degree_centrality.py +0 -144
  86. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_dispersion.py +0 -73
  87. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_eigenvector_centrality.py +0 -186
  88. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_group.py +0 -277
  89. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_harmonic_centrality.py +0 -122
  90. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_katz_centrality.py +0 -345
  91. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_laplacian_centrality.py +0 -220
  92. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_load_centrality.py +0 -344
  93. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_percolation_centrality.py +0 -87
  94. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_reaching.py +0 -140
  95. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_second_order_centrality.py +0 -82
  96. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_subgraph.py +0 -110
  97. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_trophic.py +0 -302
  98. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_voterank.py +0 -64
  99. package/runtime/python/okstra_vendor/networkx/algorithms/coloring/tests/__init__.py +0 -0
  100. package/runtime/python/okstra_vendor/networkx/algorithms/coloring/tests/test_coloring.py +0 -863
  101. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/__init__.py +0 -0
  102. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_asyn_fluid.py +0 -147
  103. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_bipartitions.py +0 -157
  104. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_centrality.py +0 -85
  105. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_divisive.py +0 -106
  106. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_kclique.py +0 -91
  107. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_label_propagation.py +0 -241
  108. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_leiden.py +0 -138
  109. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_local.py +0 -76
  110. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_louvain.py +0 -264
  111. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_lukes.py +0 -152
  112. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_modularity_max.py +0 -340
  113. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_quality.py +0 -139
  114. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_utils.py +0 -26
  115. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/__init__.py +0 -0
  116. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_attracting.py +0 -70
  117. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_biconnected.py +0 -248
  118. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_connected.py +0 -138
  119. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_semiconnected.py +0 -55
  120. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_strongly_connected.py +0 -193
  121. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_weakly_connected.py +0 -96
  122. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/__init__.py +0 -0
  123. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_connectivity.py +0 -421
  124. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_cuts.py +0 -309
  125. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_disjoint_paths.py +0 -249
  126. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_edge_augmentation.py +0 -502
  127. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_edge_kcomponents.py +0 -488
  128. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_kcomponents.py +0 -323
  129. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_kcutsets.py +0 -280
  130. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_stoer_wagner.py +0 -102
  131. package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/__init__.py +0 -0
  132. package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/gl1.gpickle.bz2 +0 -0
  133. package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/gw1.gpickle.bz2 +0 -0
  134. package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/netgen-2.gpickle.bz2 +0 -0
  135. package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/test_gomory_hu.py +0 -128
  136. package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/test_maxflow.py +0 -573
  137. package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/test_maxflow_large_graph.py +0 -155
  138. package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/test_mincost.py +0 -475
  139. package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/test_networksimplex.py +0 -481
  140. package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/wlm3.gpickle.bz2 +0 -0
  141. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/__init__.py +0 -0
  142. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/iso_r01_s80.A99 +0 -0
  143. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/iso_r01_s80.B99 +0 -0
  144. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/si2_b06_m200.A99 +0 -0
  145. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/si2_b06_m200.B99 +0 -0
  146. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/test_ismags.py +0 -719
  147. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/test_isomorphism.py +0 -103
  148. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/test_isomorphvf2.py +0 -490
  149. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/test_match_helpers.py +0 -64
  150. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/test_temporalisomorphvf2.py +0 -212
  151. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/test_tree_isomorphism.py +0 -202
  152. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/test_vf2pp.py +0 -1655
  153. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/test_vf2pp_helpers.py +0 -3118
  154. package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/test_vf2userfunc.py +0 -196
  155. package/runtime/python/okstra_vendor/networkx/algorithms/link_analysis/tests/__init__.py +0 -0
  156. package/runtime/python/okstra_vendor/networkx/algorithms/link_analysis/tests/test_hits.py +0 -77
  157. package/runtime/python/okstra_vendor/networkx/algorithms/link_analysis/tests/test_pagerank.py +0 -213
  158. package/runtime/python/okstra_vendor/networkx/algorithms/minors/tests/test_contraction.py +0 -544
  159. package/runtime/python/okstra_vendor/networkx/algorithms/operators/tests/__init__.py +0 -0
  160. package/runtime/python/okstra_vendor/networkx/algorithms/operators/tests/test_all.py +0 -328
  161. package/runtime/python/okstra_vendor/networkx/algorithms/operators/tests/test_binary.py +0 -451
  162. package/runtime/python/okstra_vendor/networkx/algorithms/operators/tests/test_product.py +0 -491
  163. package/runtime/python/okstra_vendor/networkx/algorithms/operators/tests/test_unary.py +0 -55
  164. package/runtime/python/okstra_vendor/networkx/algorithms/shortest_paths/tests/__init__.py +0 -0
  165. package/runtime/python/okstra_vendor/networkx/algorithms/shortest_paths/tests/test_astar.py +0 -254
  166. package/runtime/python/okstra_vendor/networkx/algorithms/shortest_paths/tests/test_dense.py +0 -212
  167. package/runtime/python/okstra_vendor/networkx/algorithms/shortest_paths/tests/test_dense_numpy.py +0 -88
  168. package/runtime/python/okstra_vendor/networkx/algorithms/shortest_paths/tests/test_generic.py +0 -511
  169. package/runtime/python/okstra_vendor/networkx/algorithms/shortest_paths/tests/test_unweighted.py +0 -149
  170. package/runtime/python/okstra_vendor/networkx/algorithms/shortest_paths/tests/test_weighted.py +0 -983
  171. package/runtime/python/okstra_vendor/networkx/algorithms/tests/__init__.py +0 -0
  172. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_asteroidal.py +0 -23
  173. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_boundary.py +0 -154
  174. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_bridges.py +0 -144
  175. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_broadcasting.py +0 -109
  176. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_chains.py +0 -136
  177. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_chordal.py +0 -129
  178. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_clique.py +0 -300
  179. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_cluster.py +0 -678
  180. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_communicability.py +0 -80
  181. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_core.py +0 -266
  182. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_covering.py +0 -85
  183. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_cuts.py +0 -171
  184. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_cycles.py +0 -984
  185. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_d_separation.py +0 -340
  186. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_dag.py +0 -835
  187. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_distance_measures.py +0 -831
  188. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_distance_regular.py +0 -85
  189. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_dominance.py +0 -299
  190. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_dominating.py +0 -115
  191. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_efficiency.py +0 -58
  192. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_euler.py +0 -314
  193. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_graph_hashing.py +0 -872
  194. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_graphical.py +0 -163
  195. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_hierarchy.py +0 -46
  196. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_hybrid.py +0 -24
  197. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_isolate.py +0 -26
  198. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_link_prediction.py +0 -615
  199. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_lowest_common_ancestors.py +0 -459
  200. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_matching.py +0 -556
  201. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_max_weight_clique.py +0 -179
  202. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_mis.py +0 -62
  203. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_moral.py +0 -15
  204. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_node_classification.py +0 -140
  205. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_non_randomness.py +0 -60
  206. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_perfect_graph.py +0 -27
  207. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_planar_drawing.py +0 -274
  208. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_planarity.py +0 -556
  209. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_polynomials.py +0 -57
  210. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_reciprocity.py +0 -37
  211. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_regular.py +0 -88
  212. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_richclub.py +0 -149
  213. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_similarity.py +0 -1158
  214. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_simple_paths.py +0 -803
  215. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_smallworld.py +0 -76
  216. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_smetric.py +0 -8
  217. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_sparsifiers.py +0 -138
  218. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_structuralholes.py +0 -191
  219. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_summarization.py +0 -642
  220. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_swap.py +0 -179
  221. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_threshold.py +0 -270
  222. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_time_dependent.py +0 -431
  223. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_tournament.py +0 -161
  224. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_triads.py +0 -248
  225. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_vitality.py +0 -41
  226. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_voronoi.py +0 -103
  227. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_walks.py +0 -54
  228. package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_wiener.py +0 -157
  229. package/runtime/python/okstra_vendor/networkx/algorithms/traversal/tests/__init__.py +0 -0
  230. package/runtime/python/okstra_vendor/networkx/algorithms/traversal/tests/test_beamsearch.py +0 -25
  231. package/runtime/python/okstra_vendor/networkx/algorithms/traversal/tests/test_bfs.py +0 -203
  232. package/runtime/python/okstra_vendor/networkx/algorithms/traversal/tests/test_dfs.py +0 -307
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@@ -1,872 +0,0 @@
1
- import copy
2
-
3
- import pytest
4
-
5
- import networkx as nx
6
-
7
- # Unit tests relevant for both functions in this module.
8
-
9
-
10
- def test_positive_iters():
11
- G1 = nx.empty_graph()
12
- with pytest.raises(
13
- ValueError,
14
- match="The WL algorithm requires that `iterations` be positive",
15
- ):
16
- nx.weisfeiler_lehman_graph_hash(G1, iterations=-3)
17
- with pytest.raises(
18
- ValueError,
19
- match="The WL algorithm requires that `iterations` be positive",
20
- ):
21
- nx.weisfeiler_lehman_subgraph_hashes(G1, iterations=-3)
22
- with pytest.raises(
23
- ValueError,
24
- match="The WL algorithm requires that `iterations` be positive",
25
- ):
26
- nx.weisfeiler_lehman_graph_hash(G1, iterations=0)
27
- with pytest.raises(
28
- ValueError,
29
- match="The WL algorithm requires that `iterations` be positive",
30
- ):
31
- nx.weisfeiler_lehman_subgraph_hashes(G1, iterations=0)
32
-
33
-
34
- # Unit tests for the :func:`~networkx.weisfeiler_lehman_graph_hash` function
35
-
36
-
37
- def test_empty_graph_hash():
38
- """
39
- empty graphs should give hashes regardless of other params
40
- """
41
- G1 = nx.empty_graph()
42
- G2 = nx.empty_graph()
43
-
44
- h1 = nx.weisfeiler_lehman_graph_hash(G1)
45
- h2 = nx.weisfeiler_lehman_graph_hash(G2)
46
- h3 = nx.weisfeiler_lehman_graph_hash(G2, edge_attr="edge_attr1")
47
- h4 = nx.weisfeiler_lehman_graph_hash(G2, node_attr="node_attr1")
48
- h5 = nx.weisfeiler_lehman_graph_hash(
49
- G2, edge_attr="edge_attr1", node_attr="node_attr1"
50
- )
51
- h6 = nx.weisfeiler_lehman_graph_hash(G2, iterations=10)
52
-
53
- assert h1 == h2
54
- assert h1 == h3
55
- assert h1 == h4
56
- assert h1 == h5
57
- assert h1 == h6
58
-
59
-
60
- def test_directed():
61
- """
62
- A directed graph with no bi-directional edges should yield different a graph hash
63
- to the same graph taken as undirected if there are no hash collisions.
64
- """
65
- r = 10
66
- for i in range(r):
67
- G_directed = nx.gn_graph(10 + r, seed=100 + i)
68
- G_undirected = nx.to_undirected(G_directed)
69
-
70
- h_directed = nx.weisfeiler_lehman_graph_hash(G_directed)
71
- h_undirected = nx.weisfeiler_lehman_graph_hash(G_undirected)
72
-
73
- assert h_directed != h_undirected
74
-
75
-
76
- def test_reversed():
77
- """
78
- A directed graph with no bi-directional edges should yield different a graph hash
79
- to the same graph taken with edge directions reversed if there are no hash
80
- collisions. Here we test a cycle graph which is the minimal counterexample
81
- """
82
- G = nx.cycle_graph(5, create_using=nx.DiGraph)
83
- nx.set_node_attributes(G, {n: str(n) for n in G.nodes()}, name="label")
84
-
85
- G_reversed = G.reverse()
86
-
87
- h = nx.weisfeiler_lehman_graph_hash(G, node_attr="label")
88
- h_reversed = nx.weisfeiler_lehman_graph_hash(G_reversed, node_attr="label")
89
-
90
- assert h != h_reversed
91
-
92
-
93
- def test_isomorphic():
94
- """
95
- graph hashes should be invariant to node-relabeling (when the output is reindexed
96
- by the same mapping)
97
- """
98
- n, r = 100, 10
99
- p = 1.0 / r
100
- for i in range(1, r + 1):
101
- G1 = nx.erdos_renyi_graph(n, p * i, seed=200 + i)
102
- G2 = nx.relabel_nodes(G1, {u: -1 * u for u in G1.nodes()})
103
-
104
- g1_hash = nx.weisfeiler_lehman_graph_hash(G1)
105
- g2_hash = nx.weisfeiler_lehman_graph_hash(G2)
106
-
107
- assert g1_hash == g2_hash
108
-
109
-
110
- def test_isomorphic_edge_attr():
111
- """
112
- Isomorphic graphs with differing edge attributes should yield different graph
113
- hashes if the 'edge_attr' argument is supplied and populated in the graph,
114
- and there are no hash collisions.
115
- The output should still be invariant to node-relabeling
116
- """
117
- n, r = 100, 10
118
- p = 1.0 / r
119
- for i in range(1, r + 1):
120
- G1 = nx.erdos_renyi_graph(n, p * i, seed=300 + i)
121
-
122
- for a, b in G1.edges:
123
- G1[a][b]["edge_attr1"] = f"{a}-{b}-1"
124
- G1[a][b]["edge_attr2"] = f"{a}-{b}-2"
125
-
126
- g1_hash_with_edge_attr1 = nx.weisfeiler_lehman_graph_hash(
127
- G1, edge_attr="edge_attr1"
128
- )
129
- g1_hash_with_edge_attr2 = nx.weisfeiler_lehman_graph_hash(
130
- G1, edge_attr="edge_attr2"
131
- )
132
- g1_hash_no_edge_attr = nx.weisfeiler_lehman_graph_hash(G1, edge_attr=None)
133
-
134
- assert g1_hash_with_edge_attr1 != g1_hash_no_edge_attr
135
- assert g1_hash_with_edge_attr2 != g1_hash_no_edge_attr
136
- assert g1_hash_with_edge_attr1 != g1_hash_with_edge_attr2
137
-
138
- G2 = nx.relabel_nodes(G1, {u: -1 * u for u in G1.nodes()})
139
-
140
- g2_hash_with_edge_attr1 = nx.weisfeiler_lehman_graph_hash(
141
- G2, edge_attr="edge_attr1"
142
- )
143
- g2_hash_with_edge_attr2 = nx.weisfeiler_lehman_graph_hash(
144
- G2, edge_attr="edge_attr2"
145
- )
146
-
147
- assert g1_hash_with_edge_attr1 == g2_hash_with_edge_attr1
148
- assert g1_hash_with_edge_attr2 == g2_hash_with_edge_attr2
149
-
150
-
151
- def test_missing_edge_attr():
152
- """
153
- If the 'edge_attr' argument is supplied but is missing from an edge in the graph,
154
- we should raise a KeyError
155
- """
156
- G = nx.Graph()
157
- G.add_edges_from([(1, 2, {"edge_attr1": "a"}), (1, 3, {})])
158
- pytest.raises(KeyError, nx.weisfeiler_lehman_graph_hash, G, edge_attr="edge_attr1")
159
-
160
-
161
- def test_isomorphic_node_attr():
162
- """
163
- Isomorphic graphs with differing node attributes should yield different graph
164
- hashes if the 'node_attr' argument is supplied and populated in the graph, and
165
- there are no hash collisions.
166
- The output should still be invariant to node-relabeling
167
- """
168
- n, r = 100, 10
169
- p = 1.0 / r
170
- for i in range(1, r + 1):
171
- G1 = nx.erdos_renyi_graph(n, p * i, seed=400 + i)
172
-
173
- for u in G1.nodes():
174
- G1.nodes[u]["node_attr1"] = f"{u}-1"
175
- G1.nodes[u]["node_attr2"] = f"{u}-2"
176
-
177
- g1_hash_with_node_attr1 = nx.weisfeiler_lehman_graph_hash(
178
- G1, node_attr="node_attr1"
179
- )
180
- g1_hash_with_node_attr2 = nx.weisfeiler_lehman_graph_hash(
181
- G1, node_attr="node_attr2"
182
- )
183
- g1_hash_no_node_attr = nx.weisfeiler_lehman_graph_hash(G1, node_attr=None)
184
-
185
- assert g1_hash_with_node_attr1 != g1_hash_no_node_attr
186
- assert g1_hash_with_node_attr2 != g1_hash_no_node_attr
187
- assert g1_hash_with_node_attr1 != g1_hash_with_node_attr2
188
-
189
- G2 = nx.relabel_nodes(G1, {u: -1 * u for u in G1.nodes()})
190
-
191
- g2_hash_with_node_attr1 = nx.weisfeiler_lehman_graph_hash(
192
- G2, node_attr="node_attr1"
193
- )
194
- g2_hash_with_node_attr2 = nx.weisfeiler_lehman_graph_hash(
195
- G2, node_attr="node_attr2"
196
- )
197
-
198
- assert g1_hash_with_node_attr1 == g2_hash_with_node_attr1
199
- assert g1_hash_with_node_attr2 == g2_hash_with_node_attr2
200
-
201
-
202
- def test_missing_node_attr():
203
- """
204
- If the 'node_attr' argument is supplied but is missing from a node in the graph,
205
- we should raise a KeyError
206
- """
207
- G = nx.Graph()
208
- G.add_nodes_from([(1, {"node_attr1": "a"}), (2, {})])
209
- G.add_edges_from([(1, 2), (2, 3), (3, 1), (1, 4)])
210
- pytest.raises(KeyError, nx.weisfeiler_lehman_graph_hash, G, node_attr="node_attr1")
211
-
212
-
213
- def test_isomorphic_edge_attr_and_node_attr():
214
- """
215
- Isomorphic graphs with differing node attributes should yield different graph
216
- hashes if the 'node_attr' and 'edge_attr' argument is supplied and populated in
217
- the graph, and there are no hash collisions.
218
- The output should still be invariant to node-relabeling
219
- """
220
- n, r = 100, 10
221
- p = 1.0 / r
222
- for i in range(1, r + 1):
223
- G1 = nx.erdos_renyi_graph(n, p * i, seed=500 + i)
224
-
225
- for u in G1.nodes():
226
- G1.nodes[u]["node_attr1"] = f"{u}-1"
227
- G1.nodes[u]["node_attr2"] = f"{u}-2"
228
-
229
- for a, b in G1.edges:
230
- G1[a][b]["edge_attr1"] = f"{a}-{b}-1"
231
- G1[a][b]["edge_attr2"] = f"{a}-{b}-2"
232
-
233
- g1_hash_edge1_node1 = nx.weisfeiler_lehman_graph_hash(
234
- G1, edge_attr="edge_attr1", node_attr="node_attr1"
235
- )
236
- g1_hash_edge2_node2 = nx.weisfeiler_lehman_graph_hash(
237
- G1, edge_attr="edge_attr2", node_attr="node_attr2"
238
- )
239
- g1_hash_edge1_node2 = nx.weisfeiler_lehman_graph_hash(
240
- G1, edge_attr="edge_attr1", node_attr="node_attr2"
241
- )
242
- g1_hash_no_attr = nx.weisfeiler_lehman_graph_hash(G1)
243
-
244
- assert g1_hash_edge1_node1 != g1_hash_no_attr
245
- assert g1_hash_edge2_node2 != g1_hash_no_attr
246
- assert g1_hash_edge1_node1 != g1_hash_edge2_node2
247
- assert g1_hash_edge1_node2 != g1_hash_edge2_node2
248
- assert g1_hash_edge1_node2 != g1_hash_edge1_node1
249
-
250
- G2 = nx.relabel_nodes(G1, {u: -1 * u for u in G1.nodes()})
251
-
252
- g2_hash_edge1_node1 = nx.weisfeiler_lehman_graph_hash(
253
- G2, edge_attr="edge_attr1", node_attr="node_attr1"
254
- )
255
- g2_hash_edge2_node2 = nx.weisfeiler_lehman_graph_hash(
256
- G2, edge_attr="edge_attr2", node_attr="node_attr2"
257
- )
258
-
259
- assert g1_hash_edge1_node1 == g2_hash_edge1_node1
260
- assert g1_hash_edge2_node2 == g2_hash_edge2_node2
261
-
262
-
263
- def test_digest_size():
264
- """
265
- The hash string lengths should be as expected for a variety of graphs and
266
- digest sizes
267
- """
268
- n, r = 100, 10
269
- p = 1.0 / r
270
- for i in range(1, r + 1):
271
- G = nx.erdos_renyi_graph(n, p * i, seed=1000 + i)
272
-
273
- h16 = nx.weisfeiler_lehman_graph_hash(G)
274
- h32 = nx.weisfeiler_lehman_graph_hash(G, digest_size=32)
275
-
276
- assert h16 != h32
277
- assert len(h16) == 16 * 2
278
- assert len(h32) == 32 * 2
279
-
280
-
281
- def test_directed_bugs():
282
- """
283
- These were bugs for directed graphs as discussed in issue #7806
284
- """
285
- Ga = nx.DiGraph()
286
- Gb = nx.DiGraph()
287
- Ga.add_nodes_from([1, 2, 3, 4])
288
- Gb.add_nodes_from([1, 2, 3, 4])
289
- Ga.add_edges_from([(1, 2), (3, 2)])
290
- Gb.add_edges_from([(1, 2), (3, 4)])
291
- Ga_hash = nx.weisfeiler_lehman_graph_hash(Ga)
292
- Gb_hash = nx.weisfeiler_lehman_graph_hash(Gb)
293
- assert Ga_hash != Gb_hash
294
-
295
- Tree1 = nx.DiGraph()
296
- Tree1.add_edges_from([(0, 4), (1, 5), (2, 6), (3, 7)])
297
- Tree1.add_edges_from([(4, 8), (5, 8), (6, 9), (7, 9)])
298
- Tree1.add_edges_from([(8, 10), (9, 10)])
299
- nx.set_node_attributes(
300
- Tree1, {10: "s", 8: "a", 9: "a", 4: "b", 5: "b", 6: "b", 7: "b"}, "weight"
301
- )
302
- Tree2 = copy.deepcopy(Tree1)
303
- nx.set_node_attributes(Tree1, {0: "d", 1: "c", 2: "d", 3: "c"}, "weight")
304
- nx.set_node_attributes(Tree2, {0: "d", 1: "d", 2: "c", 3: "c"}, "weight")
305
- Tree1_hash_short = nx.weisfeiler_lehman_graph_hash(
306
- Tree1, iterations=1, node_attr="weight"
307
- )
308
- Tree2_hash_short = nx.weisfeiler_lehman_graph_hash(
309
- Tree2, iterations=1, node_attr="weight"
310
- )
311
- assert Tree1_hash_short == Tree2_hash_short
312
- Tree1_hash = nx.weisfeiler_lehman_graph_hash(
313
- Tree1, node_attr="weight"
314
- ) # Default is 3 iterations
315
- Tree2_hash = nx.weisfeiler_lehman_graph_hash(Tree2, node_attr="weight")
316
- assert Tree1_hash != Tree2_hash
317
-
318
-
319
- def test_trivial_labels_isomorphism():
320
- """
321
- Trivial labelling of the graph should not change isomorphism verdicts.
322
- """
323
- n, r = 100, 10
324
- p = 1.0 / r
325
- for i in range(1, r + 1):
326
- G1 = nx.erdos_renyi_graph(n, p * i, seed=500 + i)
327
- G2 = nx.erdos_renyi_graph(n, p * i, seed=42 + i)
328
- G1_hash = nx.weisfeiler_lehman_graph_hash(G1)
329
- G2_hash = nx.weisfeiler_lehman_graph_hash(G2)
330
- equal = G1_hash == G2_hash
331
-
332
- nx.set_node_attributes(G1, values=1, name="weight")
333
- nx.set_node_attributes(G2, values=1, name="weight")
334
- G1_hash_node = nx.weisfeiler_lehman_graph_hash(G1, node_attr="weight")
335
- G2_hash_node = nx.weisfeiler_lehman_graph_hash(G2, node_attr="weight")
336
- equal_node = G1_hash_node == G2_hash_node
337
-
338
- nx.set_edge_attributes(G1, values="a", name="e_weight")
339
- nx.set_edge_attributes(G2, values="a", name="e_weight")
340
- G1_hash_edge = nx.weisfeiler_lehman_graph_hash(G1, edge_attr="e_weight")
341
- G2_hash_edge = nx.weisfeiler_lehman_graph_hash(G2, edge_attr="e_weight")
342
- equal_edge = G1_hash_edge == G2_hash_edge
343
-
344
- G1_hash_both = nx.weisfeiler_lehman_graph_hash(
345
- G1, edge_attr="e_weight", node_attr="weight"
346
- )
347
- G2_hash_both = nx.weisfeiler_lehman_graph_hash(
348
- G2, edge_attr="e_weight", node_attr="weight"
349
- )
350
- equal_both = G1_hash_both == G2_hash_both
351
-
352
- assert equal == equal_node
353
- assert equal_node == equal_edge
354
- assert equal_edge == equal_both
355
-
356
-
357
- def test_trivial_labels_isomorphism_directed():
358
- """
359
- Trivial labelling of the graph should not change isomorphism verdicts on digraphs.
360
- """
361
- n, r = 100, 10
362
- p = 1.0 / r
363
- for i in range(1, r + 1):
364
- G1 = nx.erdos_renyi_graph(n, p * i, directed=True, seed=500 + i)
365
- G2 = nx.erdos_renyi_graph(n, p * i, directed=True, seed=42 + i)
366
- G1_hash = nx.weisfeiler_lehman_graph_hash(G1)
367
- G2_hash = nx.weisfeiler_lehman_graph_hash(G2)
368
- equal = G1_hash == G2_hash
369
-
370
- nx.set_node_attributes(G1, values=1, name="weight")
371
- nx.set_node_attributes(G2, values=1, name="weight")
372
- G1_hash_node = nx.weisfeiler_lehman_graph_hash(G1, node_attr="weight")
373
- G2_hash_node = nx.weisfeiler_lehman_graph_hash(G2, node_attr="weight")
374
- equal_node = G1_hash_node == G2_hash_node
375
-
376
- nx.set_edge_attributes(G1, values="a", name="e_weight")
377
- nx.set_edge_attributes(G2, values="a", name="e_weight")
378
- G1_hash_edge = nx.weisfeiler_lehman_graph_hash(G1, edge_attr="e_weight")
379
- G2_hash_edge = nx.weisfeiler_lehman_graph_hash(G2, edge_attr="e_weight")
380
- equal_edge = G1_hash_edge == G2_hash_edge
381
-
382
- G1_hash_both = nx.weisfeiler_lehman_graph_hash(
383
- G1, edge_attr="e_weight", node_attr="weight"
384
- )
385
- G2_hash_both = nx.weisfeiler_lehman_graph_hash(
386
- G2, edge_attr="e_weight", node_attr="weight"
387
- )
388
- equal_both = G1_hash_both == G2_hash_both
389
-
390
- assert equal == equal_node
391
- assert equal_node == equal_edge
392
- assert equal_edge == equal_both
393
-
394
- # Specific case that was found to be a bug in issue #7806
395
- # Without weights worked
396
- Ga = nx.DiGraph()
397
- Ga.add_nodes_from([1, 2, 3, 4])
398
- Gb = copy.deepcopy(Ga)
399
- Ga.add_edges_from([(1, 2), (3, 2)])
400
- Gb.add_edges_from([(1, 2), (3, 4)])
401
- Ga_hash = nx.weisfeiler_lehman_graph_hash(Ga)
402
- Gb_hash = nx.weisfeiler_lehman_graph_hash(Gb)
403
- assert Ga_hash != Gb_hash
404
-
405
- # Now with trivial weights
406
- nx.set_node_attributes(Ga, values=1, name="weight")
407
- nx.set_node_attributes(Gb, values=1, name="weight")
408
- Ga_hash = nx.weisfeiler_lehman_graph_hash(Ga, node_attr="weight")
409
- Gb_hash = nx.weisfeiler_lehman_graph_hash(Gb, node_attr="weight")
410
- assert Ga_hash != Gb_hash
411
-
412
-
413
- def test_trivial_labels_hashes():
414
- """
415
- Test that 'empty' labelling of nodes or edges shouldn't have a different impact
416
- on the calculated hash. Note that we cannot assume that trivial weights have no
417
- impact at all. Without (trivial) weights, a node will start with hashing its
418
- degree. This step is omitted when there are weights.
419
- """
420
- n, r = 100, 10
421
- p = 1.0 / r
422
- for i in range(1, r + 1):
423
- G1 = nx.erdos_renyi_graph(n, p * i, seed=500 + i)
424
- nx.set_node_attributes(G1, values="", name="weight")
425
- first = nx.weisfeiler_lehman_graph_hash(G1, node_attr="weight")
426
- nx.set_edge_attributes(G1, values="", name="e_weight")
427
- second = nx.weisfeiler_lehman_graph_hash(G1, edge_attr="e_weight")
428
- assert first == second
429
- third = nx.weisfeiler_lehman_graph_hash(
430
- G1, edge_attr="e_weight", node_attr="weight"
431
- )
432
- assert second == third
433
-
434
-
435
- # Unit tests for the :func:`~networkx.weisfeiler_lehman_subgraph_hashes` function
436
-
437
-
438
- def is_subiteration(a, b):
439
- """
440
- returns True if that each hash sequence in 'a' is a prefix for
441
- the corresponding sequence indexed by the same node in 'b'.
442
- """
443
- return all(b[node][: len(hashes)] == hashes for node, hashes in a.items())
444
-
445
-
446
- def hexdigest_sizes_correct(a, digest_size):
447
- """
448
- returns True if all hex digest sizes are the expected length in a
449
- node:subgraph-hashes dictionary. Hex digest string length == 2 * bytes digest
450
- length since each pair of hex digits encodes 1 byte
451
- (https://docs.python.org/3/library/hashlib.html)
452
- """
453
- hexdigest_size = digest_size * 2
454
-
455
- def list_digest_sizes_correct(l):
456
- return all(len(x) == hexdigest_size for x in l)
457
-
458
- return all(list_digest_sizes_correct(hashes) for hashes in a.values())
459
-
460
-
461
- def test_empty_graph_subgraph_hash():
462
- """ "
463
- empty graphs should give empty dict subgraph hashes regardless of other params
464
- """
465
- G = nx.empty_graph()
466
-
467
- subgraph_hashes1 = nx.weisfeiler_lehman_subgraph_hashes(G)
468
- subgraph_hashes2 = nx.weisfeiler_lehman_subgraph_hashes(G, edge_attr="edge_attr")
469
- subgraph_hashes3 = nx.weisfeiler_lehman_subgraph_hashes(G, node_attr="edge_attr")
470
- subgraph_hashes4 = nx.weisfeiler_lehman_subgraph_hashes(G, iterations=2)
471
- subgraph_hashes5 = nx.weisfeiler_lehman_subgraph_hashes(G, digest_size=64)
472
-
473
- assert subgraph_hashes1 == {}
474
- assert subgraph_hashes2 == {}
475
- assert subgraph_hashes3 == {}
476
- assert subgraph_hashes4 == {}
477
- assert subgraph_hashes5 == {}
478
-
479
-
480
- def test_directed_subgraph_hash():
481
- """
482
- A directed graph with no bi-directional edges should yield different subgraph
483
- hashes to the same graph taken as undirected, if all hashes don't collide.
484
- """
485
- r = 10
486
- for i in range(r):
487
- G_directed = nx.gn_graph(10 + r, seed=100 + i)
488
- G_undirected = nx.to_undirected(G_directed)
489
-
490
- directed_subgraph_hashes = nx.weisfeiler_lehman_subgraph_hashes(G_directed)
491
- undirected_subgraph_hashes = nx.weisfeiler_lehman_subgraph_hashes(G_undirected)
492
-
493
- assert directed_subgraph_hashes != undirected_subgraph_hashes
494
-
495
-
496
- def test_reversed_subgraph_hash():
497
- """
498
- A directed graph with no bi-directional edges should yield different subgraph
499
- hashes to the same graph taken with edge directions reversed if there are no
500
- hash collisions. Here we test a cycle graph which is the minimal counterexample
501
- """
502
- G = nx.cycle_graph(5, create_using=nx.DiGraph)
503
- nx.set_node_attributes(G, {n: str(n) for n in G.nodes()}, name="label")
504
-
505
- G_reversed = G.reverse()
506
-
507
- h = nx.weisfeiler_lehman_subgraph_hashes(G, node_attr="label")
508
- h_reversed = nx.weisfeiler_lehman_subgraph_hashes(G_reversed, node_attr="label")
509
-
510
- assert h != h_reversed
511
-
512
-
513
- def test_isomorphic_subgraph_hash():
514
- """
515
- the subgraph hashes should be invariant to node-relabeling when the output is
516
- reindexed by the same mapping and all hashes don't collide.
517
- """
518
- n, r = 100, 10
519
- p = 1.0 / r
520
- for i in range(1, r + 1):
521
- G1 = nx.erdos_renyi_graph(n, p * i, seed=200 + i)
522
- G2 = nx.relabel_nodes(G1, {u: -1 * u for u in G1.nodes()})
523
-
524
- g1_subgraph_hashes = nx.weisfeiler_lehman_subgraph_hashes(G1)
525
- g2_subgraph_hashes = nx.weisfeiler_lehman_subgraph_hashes(G2)
526
-
527
- assert g1_subgraph_hashes == {-1 * k: v for k, v in g2_subgraph_hashes.items()}
528
-
529
-
530
- def test_isomorphic_edge_attr_subgraph_hash():
531
- """
532
- Isomorphic graphs with differing edge attributes should yield different subgraph
533
- hashes if the 'edge_attr' argument is supplied and populated in the graph, and
534
- all hashes don't collide.
535
- The output should still be invariant to node-relabeling
536
- """
537
- n, r = 100, 10
538
- p = 1.0 / r
539
- for i in range(1, r + 1):
540
- G1 = nx.erdos_renyi_graph(n, p * i, seed=300 + i)
541
-
542
- for a, b in G1.edges:
543
- G1[a][b]["edge_attr1"] = f"{a}-{b}-1"
544
- G1[a][b]["edge_attr2"] = f"{a}-{b}-2"
545
-
546
- g1_hash_with_edge_attr1 = nx.weisfeiler_lehman_subgraph_hashes(
547
- G1, edge_attr="edge_attr1"
548
- )
549
- g1_hash_with_edge_attr2 = nx.weisfeiler_lehman_subgraph_hashes(
550
- G1, edge_attr="edge_attr2"
551
- )
552
- g1_hash_no_edge_attr = nx.weisfeiler_lehman_subgraph_hashes(G1, edge_attr=None)
553
-
554
- assert g1_hash_with_edge_attr1 != g1_hash_no_edge_attr
555
- assert g1_hash_with_edge_attr2 != g1_hash_no_edge_attr
556
- assert g1_hash_with_edge_attr1 != g1_hash_with_edge_attr2
557
-
558
- G2 = nx.relabel_nodes(G1, {u: -1 * u for u in G1.nodes()})
559
-
560
- g2_hash_with_edge_attr1 = nx.weisfeiler_lehman_subgraph_hashes(
561
- G2, edge_attr="edge_attr1"
562
- )
563
- g2_hash_with_edge_attr2 = nx.weisfeiler_lehman_subgraph_hashes(
564
- G2, edge_attr="edge_attr2"
565
- )
566
-
567
- assert g1_hash_with_edge_attr1 == {
568
- -1 * k: v for k, v in g2_hash_with_edge_attr1.items()
569
- }
570
- assert g1_hash_with_edge_attr2 == {
571
- -1 * k: v for k, v in g2_hash_with_edge_attr2.items()
572
- }
573
-
574
-
575
- def test_missing_edge_attr_subgraph_hash():
576
- """
577
- If the 'edge_attr' argument is supplied but is missing from an edge in the graph,
578
- we should raise a KeyError
579
- """
580
- G = nx.Graph()
581
- G.add_edges_from([(1, 2, {"edge_attr1": "a"}), (1, 3, {})])
582
- pytest.raises(
583
- KeyError, nx.weisfeiler_lehman_subgraph_hashes, G, edge_attr="edge_attr1"
584
- )
585
-
586
-
587
- def test_isomorphic_node_attr_subgraph_hash():
588
- """
589
- Isomorphic graphs with differing node attributes should yield different subgraph
590
- hashes if the 'node_attr' argument is supplied and populated in the graph, and
591
- all hashes don't collide.
592
- The output should still be invariant to node-relabeling
593
- """
594
- n, r = 100, 10
595
- p = 1.0 / r
596
- for i in range(1, r + 1):
597
- G1 = nx.erdos_renyi_graph(n, p * i, seed=400 + i)
598
-
599
- for u in G1.nodes():
600
- G1.nodes[u]["node_attr1"] = f"{u}-1"
601
- G1.nodes[u]["node_attr2"] = f"{u}-2"
602
-
603
- g1_hash_with_node_attr1 = nx.weisfeiler_lehman_subgraph_hashes(
604
- G1, node_attr="node_attr1"
605
- )
606
- g1_hash_with_node_attr2 = nx.weisfeiler_lehman_subgraph_hashes(
607
- G1, node_attr="node_attr2"
608
- )
609
- g1_hash_no_node_attr = nx.weisfeiler_lehman_subgraph_hashes(G1, node_attr=None)
610
-
611
- assert g1_hash_with_node_attr1 != g1_hash_no_node_attr
612
- assert g1_hash_with_node_attr2 != g1_hash_no_node_attr
613
- assert g1_hash_with_node_attr1 != g1_hash_with_node_attr2
614
-
615
- G2 = nx.relabel_nodes(G1, {u: -1 * u for u in G1.nodes()})
616
-
617
- g2_hash_with_node_attr1 = nx.weisfeiler_lehman_subgraph_hashes(
618
- G2, node_attr="node_attr1"
619
- )
620
- g2_hash_with_node_attr2 = nx.weisfeiler_lehman_subgraph_hashes(
621
- G2, node_attr="node_attr2"
622
- )
623
-
624
- assert g1_hash_with_node_attr1 == {
625
- -1 * k: v for k, v in g2_hash_with_node_attr1.items()
626
- }
627
- assert g1_hash_with_node_attr2 == {
628
- -1 * k: v for k, v in g2_hash_with_node_attr2.items()
629
- }
630
-
631
-
632
- def test_missing_node_attr_subgraph_hash():
633
- """
634
- If the 'node_attr' argument is supplied but is missing from a node in the graph,
635
- we should raise a KeyError
636
- """
637
- G = nx.Graph()
638
- G.add_nodes_from([(1, {"node_attr1": "a"}), (2, {})])
639
- G.add_edges_from([(1, 2), (2, 3), (3, 1), (1, 4)])
640
- pytest.raises(
641
- KeyError, nx.weisfeiler_lehman_subgraph_hashes, G, node_attr="node_attr1"
642
- )
643
-
644
-
645
- def test_isomorphic_edge_attr_and_node_attr_subgraph_hash():
646
- """
647
- Isomorphic graphs with differing node attributes should yield different subgraph
648
- hashes if the 'node_attr' and 'edge_attr' argument is supplied and populated in
649
- the graph, and all hashes don't collide
650
- The output should still be invariant to node-relabeling
651
- """
652
- n, r = 100, 10
653
- p = 1.0 / r
654
- for i in range(1, r + 1):
655
- G1 = nx.erdos_renyi_graph(n, p * i, seed=500 + i)
656
-
657
- for u in G1.nodes():
658
- G1.nodes[u]["node_attr1"] = f"{u}-1"
659
- G1.nodes[u]["node_attr2"] = f"{u}-2"
660
-
661
- for a, b in G1.edges:
662
- G1[a][b]["edge_attr1"] = f"{a}-{b}-1"
663
- G1[a][b]["edge_attr2"] = f"{a}-{b}-2"
664
-
665
- g1_hash_edge1_node1 = nx.weisfeiler_lehman_subgraph_hashes(
666
- G1, edge_attr="edge_attr1", node_attr="node_attr1"
667
- )
668
- g1_hash_edge2_node2 = nx.weisfeiler_lehman_subgraph_hashes(
669
- G1, edge_attr="edge_attr2", node_attr="node_attr2"
670
- )
671
- g1_hash_edge1_node2 = nx.weisfeiler_lehman_subgraph_hashes(
672
- G1, edge_attr="edge_attr1", node_attr="node_attr2"
673
- )
674
- g1_hash_no_attr = nx.weisfeiler_lehman_subgraph_hashes(G1)
675
-
676
- assert g1_hash_edge1_node1 != g1_hash_no_attr
677
- assert g1_hash_edge2_node2 != g1_hash_no_attr
678
- assert g1_hash_edge1_node1 != g1_hash_edge2_node2
679
- assert g1_hash_edge1_node2 != g1_hash_edge2_node2
680
- assert g1_hash_edge1_node2 != g1_hash_edge1_node1
681
-
682
- G2 = nx.relabel_nodes(G1, {u: -1 * u for u in G1.nodes()})
683
-
684
- g2_hash_edge1_node1 = nx.weisfeiler_lehman_subgraph_hashes(
685
- G2, edge_attr="edge_attr1", node_attr="node_attr1"
686
- )
687
- g2_hash_edge2_node2 = nx.weisfeiler_lehman_subgraph_hashes(
688
- G2, edge_attr="edge_attr2", node_attr="node_attr2"
689
- )
690
-
691
- assert g1_hash_edge1_node1 == {
692
- -1 * k: v for k, v in g2_hash_edge1_node1.items()
693
- }
694
- assert g1_hash_edge2_node2 == {
695
- -1 * k: v for k, v in g2_hash_edge2_node2.items()
696
- }
697
-
698
-
699
- def test_iteration_depth():
700
- """
701
- All nodes should have the correct number of subgraph hashes in the output when
702
- using degree as initial node labels.
703
- Subsequent iteration depths for the same graph should be additive for each node
704
- """
705
- n, r = 100, 10
706
- p = 1.0 / r
707
- for i in range(1, r + 1):
708
- G = nx.erdos_renyi_graph(n, p * i, seed=600 + i)
709
-
710
- depth3 = nx.weisfeiler_lehman_subgraph_hashes(G, iterations=3)
711
- depth4 = nx.weisfeiler_lehman_subgraph_hashes(G, iterations=4)
712
- depth5 = nx.weisfeiler_lehman_subgraph_hashes(G, iterations=5)
713
-
714
- assert all(len(hashes) == 3 for hashes in depth3.values())
715
- assert all(len(hashes) == 4 for hashes in depth4.values())
716
- assert all(len(hashes) == 5 for hashes in depth5.values())
717
-
718
- assert is_subiteration(depth3, depth4)
719
- assert is_subiteration(depth4, depth5)
720
- assert is_subiteration(depth3, depth5)
721
-
722
-
723
- def test_iteration_depth_edge_attr():
724
- """
725
- All nodes should have the correct number of subgraph hashes in the output when
726
- setting initial node labels empty and using an edge attribute when aggregating
727
- neighborhoods.
728
- Subsequent iteration depths for the same graph should be additive for each node
729
- """
730
- n, r = 100, 10
731
- p = 1.0 / r
732
- for i in range(1, r + 1):
733
- G = nx.erdos_renyi_graph(n, p * i, seed=700 + i)
734
-
735
- for a, b in G.edges:
736
- G[a][b]["edge_attr1"] = f"{a}-{b}-1"
737
-
738
- depth3 = nx.weisfeiler_lehman_subgraph_hashes(
739
- G, edge_attr="edge_attr1", iterations=3
740
- )
741
- depth4 = nx.weisfeiler_lehman_subgraph_hashes(
742
- G, edge_attr="edge_attr1", iterations=4
743
- )
744
- depth5 = nx.weisfeiler_lehman_subgraph_hashes(
745
- G, edge_attr="edge_attr1", iterations=5
746
- )
747
-
748
- assert all(len(hashes) == 3 for hashes in depth3.values())
749
- assert all(len(hashes) == 4 for hashes in depth4.values())
750
- assert all(len(hashes) == 5 for hashes in depth5.values())
751
-
752
- assert is_subiteration(depth3, depth4)
753
- assert is_subiteration(depth4, depth5)
754
- assert is_subiteration(depth3, depth5)
755
-
756
-
757
- def test_iteration_depth_node_attr():
758
- """
759
- All nodes should have the correct number of subgraph hashes in the output when
760
- setting initial node labels to an attribute.
761
- Subsequent iteration depths for the same graph should be additive for each node
762
- """
763
- n, r = 100, 10
764
- p = 1.0 / r
765
- for i in range(1, r + 1):
766
- G = nx.erdos_renyi_graph(n, p * i, seed=800 + i)
767
-
768
- for u in G.nodes():
769
- G.nodes[u]["node_attr1"] = f"{u}-1"
770
-
771
- depth3 = nx.weisfeiler_lehman_subgraph_hashes(
772
- G, node_attr="node_attr1", iterations=3
773
- )
774
- depth4 = nx.weisfeiler_lehman_subgraph_hashes(
775
- G, node_attr="node_attr1", iterations=4
776
- )
777
- depth5 = nx.weisfeiler_lehman_subgraph_hashes(
778
- G, node_attr="node_attr1", iterations=5
779
- )
780
-
781
- assert all(len(hashes) == 3 for hashes in depth3.values())
782
- assert all(len(hashes) == 4 for hashes in depth4.values())
783
- assert all(len(hashes) == 5 for hashes in depth5.values())
784
-
785
- assert is_subiteration(depth3, depth4)
786
- assert is_subiteration(depth4, depth5)
787
- assert is_subiteration(depth3, depth5)
788
-
789
-
790
- def test_iteration_depth_node_edge_attr():
791
- """
792
- All nodes should have the correct number of subgraph hashes in the output when
793
- setting initial node labels to an attribute and also using an edge attribute when
794
- aggregating neighborhoods.
795
- Subsequent iteration depths for the same graph should be additive for each node
796
- """
797
- n, r = 100, 10
798
- p = 1.0 / r
799
- for i in range(1, r + 1):
800
- G = nx.erdos_renyi_graph(n, p * i, seed=900 + i)
801
-
802
- for u in G.nodes():
803
- G.nodes[u]["node_attr1"] = f"{u}-1"
804
-
805
- for a, b in G.edges:
806
- G[a][b]["edge_attr1"] = f"{a}-{b}-1"
807
-
808
- depth3 = nx.weisfeiler_lehman_subgraph_hashes(
809
- G, edge_attr="edge_attr1", node_attr="node_attr1", iterations=3
810
- )
811
- depth4 = nx.weisfeiler_lehman_subgraph_hashes(
812
- G, edge_attr="edge_attr1", node_attr="node_attr1", iterations=4
813
- )
814
- depth5 = nx.weisfeiler_lehman_subgraph_hashes(
815
- G, edge_attr="edge_attr1", node_attr="node_attr1", iterations=5
816
- )
817
-
818
- assert all(len(hashes) == 3 for hashes in depth3.values())
819
- assert all(len(hashes) == 4 for hashes in depth4.values())
820
- assert all(len(hashes) == 5 for hashes in depth5.values())
821
-
822
- assert is_subiteration(depth3, depth4)
823
- assert is_subiteration(depth4, depth5)
824
- assert is_subiteration(depth3, depth5)
825
-
826
-
827
- def test_digest_size_subgraph_hash():
828
- """
829
- The hash string lengths should be as expected for a variety of graphs and
830
- digest sizes
831
- """
832
- n, r = 100, 10
833
- p = 1.0 / r
834
- for i in range(1, r + 1):
835
- G = nx.erdos_renyi_graph(n, p * i, seed=1000 + i)
836
-
837
- digest_size16_hashes = nx.weisfeiler_lehman_subgraph_hashes(G)
838
- digest_size32_hashes = nx.weisfeiler_lehman_subgraph_hashes(G, digest_size=32)
839
-
840
- assert digest_size16_hashes != digest_size32_hashes
841
-
842
- assert hexdigest_sizes_correct(digest_size16_hashes, 16)
843
- assert hexdigest_sizes_correct(digest_size32_hashes, 32)
844
-
845
-
846
- def test_initial_node_labels_subgraph_hash():
847
- """
848
- Including the hashed initial label prepends an extra hash to the lists
849
- """
850
- G = nx.path_graph(5)
851
- nx.set_node_attributes(G, {i: int(0 < i < 4) for i in G}, "label")
852
- # initial node labels:
853
- # 0--1--1--1--0
854
-
855
- without_initial_label = nx.weisfeiler_lehman_subgraph_hashes(G, node_attr="label")
856
- assert all(len(v) == 3 for v in without_initial_label.values())
857
- # 3 different 1 hop nhds
858
- assert len({v[0] for v in without_initial_label.values()}) == 3
859
-
860
- with_initial_label = nx.weisfeiler_lehman_subgraph_hashes(
861
- G, node_attr="label", include_initial_labels=True
862
- )
863
- assert all(len(v) == 4 for v in with_initial_label.values())
864
- # 2 different initial labels
865
- assert len({v[0] for v in with_initial_label.values()}) == 2
866
-
867
- # check hashes match otherwise
868
- for u in G:
869
- for a, b in zip(
870
- with_initial_label[u][1:], without_initial_label[u], strict=True
871
- ):
872
- assert a == b