okstra 0.113.0 → 0.115.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.kr.md +2 -2
- package/README.md +2 -2
- package/docs/for-ai/README.md +2 -2
- package/docs/for-ai/skills/{okstra-brief.md → okstra-brief-gen.md} +3 -3
- package/docs/for-ai/skills/okstra-inspect.md +1 -1
- package/docs/kr/architecture.md +11 -11
- package/docs/kr/cli.md +1 -1
- package/docs/kr/follow-ups/2026-07-10-final-report-option-3.md +51 -0
- package/docs/project-structure-overview.md +2 -2
- package/package.json +1 -1
- package/runtime/BUILD.json +2 -2
- package/runtime/agents/workers/report-writer-worker.md +1 -0
- package/runtime/prompts/lead/context-loader.md +2 -2
- package/runtime/prompts/lead/okstra-lead-contract.md +1 -1
- package/runtime/prompts/profiles/_common-contract.md +3 -3
- package/runtime/prompts/profiles/implementation-planning.md +1 -1
- package/runtime/prompts/profiles/requirements-discovery.md +2 -2
- package/runtime/python/okstra_ctl/fix_cycles.py +1 -1
- package/runtime/python/okstra_ctl/implementation_stage.py +46 -39
- package/runtime/python/okstra_ctl/report_views.py +151 -12
- package/runtime/python/okstra_ctl/run.py +24 -24
- package/runtime/python/okstra_ctl/wizard.py +3 -3
- package/runtime/python/okstra_ctl/worktree.py +1 -1
- package/runtime/python/okstra_token_usage/claude.py +58 -19
- package/runtime/python/okstra_token_usage/collect.py +3 -1
- package/runtime/python/okstra_vendor/__init__.py +3 -0
- package/runtime/schemas/final-report-v1.0.schema.json +20 -0
- package/runtime/skills/{okstra-brief → okstra-brief-gen}/SKILL.md +6 -6
- package/runtime/skills/{okstra-brief → okstra-brief-gen}/references/reporter-confirmations.md +1 -1
- package/runtime/skills/{okstra-brief → okstra-brief-gen}/references/tracker-recursion.md +1 -1
- package/runtime/skills/okstra-inspect/SKILL.md +2 -2
- package/runtime/templates/reports/brief.template.md +2 -2
- package/runtime/templates/reports/final-report.template.md +14 -0
- package/runtime/templates/reports/i18n/en.json +23 -12
- package/runtime/templates/reports/i18n/ko.json +23 -12
- package/runtime/templates/reports/report.css +55 -0
- package/runtime/templates/reports/report.js +53 -1
- package/runtime/validators/validate-brief.py +5 -5
- package/runtime/validators/validate-brief.sh +1 -1
- package/src/commands/lifecycle/uninstall.mjs +2 -1
- package/src/lib/skill-catalog.mjs +2 -1
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_approx_clust_coeff.py +0 -41
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_clique.py +0 -112
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_connectivity.py +0 -199
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_density.py +0 -146
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_distance_measures.py +0 -59
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_dominating_set.py +0 -78
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_kcomponents.py +0 -303
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_matching.py +0 -8
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_maxcut.py +0 -94
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_ramsey.py +0 -31
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_steinertree.py +0 -306
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_traveling_salesman.py +0 -1014
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_treewidth.py +0 -274
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_vertex_cover.py +0 -68
- package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/base_test.py +0 -81
- package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_connectivity.py +0 -143
- package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_correlation.py +0 -122
- package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_mixing.py +0 -174
- package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_neighbor_degree.py +0 -107
- package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_pairs.py +0 -87
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_basic.py +0 -125
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_centrality.py +0 -192
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_cluster.py +0 -84
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_covering.py +0 -33
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_edgelist.py +0 -240
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_extendability.py +0 -334
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_generators.py +0 -407
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_link_analysis.py +0 -218
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_matching.py +0 -327
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_matrix.py +0 -138
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_project.py +0 -409
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_redundancy.py +0 -35
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_spectral_bipartivity.py +0 -80
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_betweenness_centrality.py +0 -923
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_betweenness_centrality_subset.py +0 -354
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_closeness_centrality.py +0 -274
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_current_flow_betweenness_centrality.py +0 -259
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_current_flow_betweenness_centrality_subset.py +0 -147
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_current_flow_closeness.py +0 -43
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_degree_centrality.py +0 -144
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_dispersion.py +0 -73
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_eigenvector_centrality.py +0 -186
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_group.py +0 -277
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_harmonic_centrality.py +0 -122
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_katz_centrality.py +0 -345
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_laplacian_centrality.py +0 -220
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_load_centrality.py +0 -344
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_percolation_centrality.py +0 -87
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_reaching.py +0 -140
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_second_order_centrality.py +0 -82
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_subgraph.py +0 -110
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_trophic.py +0 -302
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_voterank.py +0 -64
- package/runtime/python/okstra_vendor/networkx/algorithms/coloring/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/coloring/tests/test_coloring.py +0 -863
- package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_asyn_fluid.py +0 -147
- package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_bipartitions.py +0 -157
- package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_centrality.py +0 -85
- package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_divisive.py +0 -106
- package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_kclique.py +0 -91
- package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_label_propagation.py +0 -241
- package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_leiden.py +0 -138
- package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_local.py +0 -76
- package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_louvain.py +0 -264
- package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_lukes.py +0 -152
- package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_modularity_max.py +0 -340
- package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_quality.py +0 -139
- package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_utils.py +0 -26
- package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_attracting.py +0 -70
- package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_biconnected.py +0 -248
- package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_connected.py +0 -138
- package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_semiconnected.py +0 -55
- package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_strongly_connected.py +0 -193
- package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_weakly_connected.py +0 -96
- package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_connectivity.py +0 -421
- package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_cuts.py +0 -309
- package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_disjoint_paths.py +0 -249
- package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_edge_augmentation.py +0 -502
- package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_edge_kcomponents.py +0 -488
- package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_kcomponents.py +0 -323
- package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_kcutsets.py +0 -280
- package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_stoer_wagner.py +0 -102
- package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/gl1.gpickle.bz2 +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/gw1.gpickle.bz2 +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/netgen-2.gpickle.bz2 +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/test_gomory_hu.py +0 -128
- package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/test_maxflow.py +0 -573
- package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/test_maxflow_large_graph.py +0 -155
- package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/test_mincost.py +0 -475
- package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/test_networksimplex.py +0 -481
- package/runtime/python/okstra_vendor/networkx/algorithms/flow/tests/wlm3.gpickle.bz2 +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/iso_r01_s80.A99 +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/iso_r01_s80.B99 +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/si2_b06_m200.A99 +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/si2_b06_m200.B99 +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/test_ismags.py +0 -719
- package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/test_isomorphism.py +0 -103
- package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/test_isomorphvf2.py +0 -490
- package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/test_match_helpers.py +0 -64
- package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/test_temporalisomorphvf2.py +0 -212
- package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/test_tree_isomorphism.py +0 -202
- package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/test_vf2pp.py +0 -1655
- package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/test_vf2pp_helpers.py +0 -3118
- package/runtime/python/okstra_vendor/networkx/algorithms/isomorphism/tests/test_vf2userfunc.py +0 -196
- package/runtime/python/okstra_vendor/networkx/algorithms/link_analysis/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/link_analysis/tests/test_hits.py +0 -77
- package/runtime/python/okstra_vendor/networkx/algorithms/link_analysis/tests/test_pagerank.py +0 -213
- package/runtime/python/okstra_vendor/networkx/algorithms/minors/tests/test_contraction.py +0 -544
- package/runtime/python/okstra_vendor/networkx/algorithms/operators/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/operators/tests/test_all.py +0 -328
- package/runtime/python/okstra_vendor/networkx/algorithms/operators/tests/test_binary.py +0 -451
- package/runtime/python/okstra_vendor/networkx/algorithms/operators/tests/test_product.py +0 -491
- package/runtime/python/okstra_vendor/networkx/algorithms/operators/tests/test_unary.py +0 -55
- package/runtime/python/okstra_vendor/networkx/algorithms/shortest_paths/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/shortest_paths/tests/test_astar.py +0 -254
- package/runtime/python/okstra_vendor/networkx/algorithms/shortest_paths/tests/test_dense.py +0 -212
- package/runtime/python/okstra_vendor/networkx/algorithms/shortest_paths/tests/test_dense_numpy.py +0 -88
- package/runtime/python/okstra_vendor/networkx/algorithms/shortest_paths/tests/test_generic.py +0 -511
- package/runtime/python/okstra_vendor/networkx/algorithms/shortest_paths/tests/test_unweighted.py +0 -149
- package/runtime/python/okstra_vendor/networkx/algorithms/shortest_paths/tests/test_weighted.py +0 -983
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_asteroidal.py +0 -23
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_boundary.py +0 -154
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_bridges.py +0 -144
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_broadcasting.py +0 -109
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_chains.py +0 -136
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_chordal.py +0 -129
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_clique.py +0 -300
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_cluster.py +0 -678
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_communicability.py +0 -80
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_core.py +0 -266
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_covering.py +0 -85
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_cuts.py +0 -171
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_cycles.py +0 -984
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_d_separation.py +0 -340
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_dag.py +0 -835
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_distance_measures.py +0 -831
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_distance_regular.py +0 -85
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_dominance.py +0 -299
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_dominating.py +0 -115
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_efficiency.py +0 -58
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_euler.py +0 -314
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_graph_hashing.py +0 -872
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_graphical.py +0 -163
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_hierarchy.py +0 -46
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_hybrid.py +0 -24
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_isolate.py +0 -26
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_link_prediction.py +0 -615
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_lowest_common_ancestors.py +0 -459
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_matching.py +0 -556
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_max_weight_clique.py +0 -179
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_mis.py +0 -62
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_moral.py +0 -15
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_node_classification.py +0 -140
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_non_randomness.py +0 -60
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_perfect_graph.py +0 -27
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_planar_drawing.py +0 -274
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_planarity.py +0 -556
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_polynomials.py +0 -57
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_reciprocity.py +0 -37
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_regular.py +0 -88
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_richclub.py +0 -149
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_similarity.py +0 -1158
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_simple_paths.py +0 -803
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_smallworld.py +0 -76
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_smetric.py +0 -8
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_sparsifiers.py +0 -138
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_structuralholes.py +0 -191
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_summarization.py +0 -642
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_swap.py +0 -179
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_threshold.py +0 -270
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_time_dependent.py +0 -431
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_tournament.py +0 -161
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_triads.py +0 -248
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_vitality.py +0 -41
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_voronoi.py +0 -103
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_walks.py +0 -54
- package/runtime/python/okstra_vendor/networkx/algorithms/tests/test_wiener.py +0 -157
- package/runtime/python/okstra_vendor/networkx/algorithms/traversal/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/traversal/tests/test_beamsearch.py +0 -25
- package/runtime/python/okstra_vendor/networkx/algorithms/traversal/tests/test_bfs.py +0 -203
- package/runtime/python/okstra_vendor/networkx/algorithms/traversal/tests/test_dfs.py +0 -307
- package/runtime/python/okstra_vendor/networkx/algorithms/traversal/tests/test_edgebfs.py +0 -147
- package/runtime/python/okstra_vendor/networkx/algorithms/traversal/tests/test_edgedfs.py +0 -131
- package/runtime/python/okstra_vendor/networkx/algorithms/tree/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/tree/tests/test_branchings.py +0 -624
- package/runtime/python/okstra_vendor/networkx/algorithms/tree/tests/test_coding.py +0 -114
- package/runtime/python/okstra_vendor/networkx/algorithms/tree/tests/test_decomposition.py +0 -79
- package/runtime/python/okstra_vendor/networkx/algorithms/tree/tests/test_distance_measures.py +0 -99
- package/runtime/python/okstra_vendor/networkx/algorithms/tree/tests/test_mst.py +0 -934
- package/runtime/python/okstra_vendor/networkx/algorithms/tree/tests/test_operations.py +0 -53
- package/runtime/python/okstra_vendor/networkx/algorithms/tree/tests/test_recognition.py +0 -174
- package/runtime/python/okstra_vendor/networkx/classes/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/classes/tests/dispatch_interface.py +0 -192
- package/runtime/python/okstra_vendor/networkx/classes/tests/historical_tests.py +0 -476
- package/runtime/python/okstra_vendor/networkx/classes/tests/test_coreviews.py +0 -362
- package/runtime/python/okstra_vendor/networkx/classes/tests/test_digraph.py +0 -331
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- package/runtime/python/okstra_vendor/networkx/drawing/tests/baseline/test_display_complex.png +0 -0
- package/runtime/python/okstra_vendor/networkx/drawing/tests/baseline/test_display_empty_graph.png +0 -0
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- package/runtime/python/okstra_vendor/networkx/drawing/tests/test_latex.py +0 -285
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- package/runtime/python/okstra_vendor/networkx/generators/tests/test_internet_as_graphs.py +0 -221
- package/runtime/python/okstra_vendor/networkx/generators/tests/test_intersection.py +0 -28
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- package/runtime/python/okstra_vendor/networkx/generators/tests/test_joint_degree_seq.py +0 -125
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- package/runtime/python/okstra_vendor/networkx/generators/tests/test_nonisomorphic_trees.py +0 -82
- package/runtime/python/okstra_vendor/networkx/generators/tests/test_random_clustered.py +0 -33
- package/runtime/python/okstra_vendor/networkx/generators/tests/test_random_graphs.py +0 -495
- package/runtime/python/okstra_vendor/networkx/generators/tests/test_small.py +0 -220
- package/runtime/python/okstra_vendor/networkx/generators/tests/test_spectral_graph_forge.py +0 -49
- package/runtime/python/okstra_vendor/networkx/generators/tests/test_stochastic.py +0 -72
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- package/runtime/python/okstra_vendor/networkx/generators/tests/test_time_series.py +0 -64
- package/runtime/python/okstra_vendor/networkx/generators/tests/test_trees.py +0 -195
- package/runtime/python/okstra_vendor/networkx/generators/tests/test_triads.py +0 -15
- package/runtime/python/okstra_vendor/networkx/linalg/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/linalg/tests/test_algebraic_connectivity.py +0 -400
- package/runtime/python/okstra_vendor/networkx/linalg/tests/test_attrmatrix.py +0 -108
- package/runtime/python/okstra_vendor/networkx/linalg/tests/test_bethehessian.py +0 -40
- package/runtime/python/okstra_vendor/networkx/linalg/tests/test_graphmatrix.py +0 -275
- package/runtime/python/okstra_vendor/networkx/linalg/tests/test_laplacian.py +0 -334
- package/runtime/python/okstra_vendor/networkx/linalg/tests/test_modularity.py +0 -86
- package/runtime/python/okstra_vendor/networkx/linalg/tests/test_spectrum.py +0 -70
- package/runtime/python/okstra_vendor/networkx/readwrite/json_graph/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/json_graph/tests/test_adjacency.py +0 -78
- package/runtime/python/okstra_vendor/networkx/readwrite/json_graph/tests/test_cytoscape.py +0 -78
- package/runtime/python/okstra_vendor/networkx/readwrite/json_graph/tests/test_node_link.py +0 -109
- package/runtime/python/okstra_vendor/networkx/readwrite/json_graph/tests/test_tree.py +0 -48
- package/runtime/python/okstra_vendor/networkx/readwrite/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_adjlist.py +0 -354
- package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_edgelist.py +0 -318
- package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_gexf.py +0 -612
- package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_gml.py +0 -744
- package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_graph6.py +0 -181
- package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_graphml.py +0 -1531
- package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_leda.py +0 -30
- package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_p2g.py +0 -63
- package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_pajek.py +0 -128
- package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_sparse6.py +0 -166
- package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_text.py +0 -1742
- package/runtime/python/okstra_vendor/networkx/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/tests/test_all_random_functions.py +0 -248
- package/runtime/python/okstra_vendor/networkx/tests/test_convert.py +0 -321
- package/runtime/python/okstra_vendor/networkx/tests/test_convert_numpy.py +0 -531
- package/runtime/python/okstra_vendor/networkx/tests/test_convert_pandas.py +0 -349
- package/runtime/python/okstra_vendor/networkx/tests/test_convert_scipy.py +0 -281
- package/runtime/python/okstra_vendor/networkx/tests/test_exceptions.py +0 -40
- package/runtime/python/okstra_vendor/networkx/tests/test_import.py +0 -11
- package/runtime/python/okstra_vendor/networkx/tests/test_lazy_imports.py +0 -96
- package/runtime/python/okstra_vendor/networkx/tests/test_relabel.py +0 -349
- package/runtime/python/okstra_vendor/networkx/tests/test_removed_functions_exception_messages.py +0 -8
- package/runtime/python/okstra_vendor/networkx/utils/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/utils/tests/test__init.py +0 -11
- package/runtime/python/okstra_vendor/networkx/utils/tests/test_backends.py +0 -225
- package/runtime/python/okstra_vendor/networkx/utils/tests/test_config.py +0 -263
- package/runtime/python/okstra_vendor/networkx/utils/tests/test_decorators.py +0 -510
- package/runtime/python/okstra_vendor/networkx/utils/tests/test_heaps.py +0 -131
- package/runtime/python/okstra_vendor/networkx/utils/tests/test_mapped_queue.py +0 -268
- package/runtime/python/okstra_vendor/networkx/utils/tests/test_misc.py +0 -393
- package/runtime/python/okstra_vendor/networkx/utils/tests/test_random_sequence.py +0 -53
- package/runtime/python/okstra_vendor/networkx/utils/tests/test_rcm.py +0 -63
- package/runtime/python/okstra_vendor/networkx/utils/tests/test_unionfind.py +0 -55
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Unit tests for adjlist.
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class TestGenerateAdjlist:
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@pytest.mark.parametrize("graph_type", [nx.Graph, nx.MultiGraph])
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def test_undirected(self, graph_type):
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lines = [
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def test_multiple_edges_directed(self):
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def test_multiple_edges_with_data(self):
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def test_with_self_loop(self):
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assert list(nx.generate_adjlist(G)) == lines
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class TestAdjlist:
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@classmethod
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def setup_class(cls):
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cls.G = nx.Graph(name="test")
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e = [("a", "b"), ("b", "c"), ("c", "d"), ("d", "e"), ("e", "f"), ("a", "f")]
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cls.G.add_edges_from(e)
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cls.DG = nx.DiGraph(cls.G)
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cls.XG.add_weighted_edges_from([(1, 2, 5), (1, 2, 5), (1, 2, 1), (3, 3, 42)])
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cls.XDG = nx.MultiDiGraph(cls.XG)
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def test_read_multiline_adjlist_1(self):
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bytesIO = io.BytesIO(s)
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G = nx.read_multiline_adjlist(bytesIO)
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adj = {"1": {"3": {}, "2": {}}, "3": {"1": {}}, "2": {"1": {}}}
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assert graphs_equal(G, nx.Graph(adj))
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def test_unicode(self, tmp_path):
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G = nx.Graph()
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name1 = chr(2344) + chr(123) + chr(6543)
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name2 = chr(5543) + chr(1543) + chr(324)
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G.add_edge(name1, "Radiohead", **{name2: 3})
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fname = tmp_path / "adjlist.txt"
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nx.write_multiline_adjlist(G, fname)
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H = nx.read_multiline_adjlist(fname)
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assert graphs_equal(G, H)
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def test_latin1_err(self, tmp_path):
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G = nx.Graph()
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name1 = chr(2344) + chr(123) + chr(6543)
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name2 = chr(5543) + chr(1543) + chr(324)
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G.add_edge(name1, "Radiohead", **{name2: 3})
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fname = tmp_path / "adjlist.txt"
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with pytest.raises(UnicodeEncodeError):
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nx.write_multiline_adjlist(G, fname, encoding="latin-1")
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def test_latin1(self, tmp_path):
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G = nx.Graph()
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name1 = "Bj" + chr(246) + "rk"
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G.add_edge(name1, "Radiohead", **{name2: 3})
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fname = tmp_path / "adjlist.txt"
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nx.write_multiline_adjlist(G, fname, encoding="latin-1")
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H = nx.read_multiline_adjlist(fname, encoding="latin-1")
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assert graphs_equal(G, H)
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def test_parse_adjlist(self):
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lines = ["1 2 5", "2 3 4", "3 5", "4", "5"]
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nx.parse_adjlist(lines, nodetype=int) # smoke test
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with pytest.raises(TypeError):
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nx.parse_adjlist(lines, nodetype="int")
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lines = ["1 2 5", "2 b", "c"]
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with pytest.raises(TypeError):
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nx.parse_adjlist(lines, nodetype=int)
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def test_adjlist_graph(self, tmp_path):
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G = self.G
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fname = tmp_path / "adjlist.txt"
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nx.write_adjlist(G, fname)
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H = nx.read_adjlist(fname)
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H2 = nx.read_adjlist(fname)
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assert nodes_equal(list(H), list(G))
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assert edges_equal(list(H.edges()), list(G.edges()))
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def test_adjlist_digraph(self, tmp_path):
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G = self.DG
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fname = tmp_path / "adjlist.txt"
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nx.write_adjlist(G, fname)
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H = nx.read_adjlist(fname, create_using=nx.DiGraph())
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H2 = nx.read_adjlist(fname, create_using=nx.DiGraph())
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assert H is not H2 # they should be different graphs
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assert nodes_equal(list(H), list(G))
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assert edges_equal(list(H.edges()), list(G.edges()), directed=True)
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def test_adjlist_integers(self, tmp_path):
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fname = tmp_path / "adjlist.txt"
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G = nx.convert_node_labels_to_integers(self.G)
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nx.write_adjlist(G, fname)
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H = nx.read_adjlist(fname, nodetype=int)
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H2 = nx.read_adjlist(fname, nodetype=int)
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assert H is not H2 # they should be different graphs
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assert nodes_equal(list(H), list(G))
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assert edges_equal(list(H.edges()), list(G.edges()))
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def test_adjlist_multigraph(self, tmp_path):
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G = self.XG
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fname = tmp_path / "adjlist.txt"
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nx.write_adjlist(G, fname)
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H = nx.read_adjlist(fname, nodetype=int, create_using=nx.MultiGraph())
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H2 = nx.read_adjlist(fname, nodetype=int, create_using=nx.MultiGraph())
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assert H is not H2 # they should be different graphs
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assert nodes_equal(list(H), list(G))
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assert edges_equal(list(H.edges()), list(G.edges()))
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def test_adjlist_multidigraph(self, tmp_path):
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G = self.XDG
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fname = tmp_path / "adjlist.txt"
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nx.write_adjlist(G, fname)
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H = nx.read_adjlist(fname, nodetype=int, create_using=nx.MultiDiGraph())
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H2 = nx.read_adjlist(fname, nodetype=int, create_using=nx.MultiDiGraph())
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215
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assert H is not H2 # they should be different graphs
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assert nodes_equal(list(H), list(G))
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217
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assert edges_equal(list(H.edges()), list(G.edges()), directed=True)
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219
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def test_adjlist_delimiter(self):
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fh = io.BytesIO()
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G = nx.path_graph(3)
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nx.write_adjlist(G, fh, delimiter=":")
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fh.seek(0)
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H = nx.read_adjlist(fh, nodetype=int, delimiter=":")
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225
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assert nodes_equal(list(H), list(G))
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assert edges_equal(list(H.edges()), list(G.edges()))
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229
|
-
class TestMultilineAdjlist:
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@classmethod
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231
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def setup_class(cls):
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232
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cls.G = nx.Graph(name="test")
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e = [("a", "b"), ("b", "c"), ("c", "d"), ("d", "e"), ("e", "f"), ("a", "f")]
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cls.G.add_edges_from(e)
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cls.G.add_node("g")
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cls.DG = nx.DiGraph(cls.G)
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cls.DG.remove_edge("b", "a")
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cls.DG.remove_edge("b", "c")
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cls.XG = nx.MultiGraph()
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|
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cls.XG.add_weighted_edges_from([(1, 2, 5), (1, 2, 5), (1, 2, 1), (3, 3, 42)])
|
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241
|
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cls.XDG = nx.MultiDiGraph(cls.XG)
|
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242
|
-
|
|
243
|
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def test_parse_multiline_adjlist(self):
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244
|
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lines = [
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245
|
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"1 2",
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246
|
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"b {'weight':3, 'name': 'Frodo'}",
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247
|
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"c {}",
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248
|
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"d 1",
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249
|
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"e {'weight':6, 'name': 'Saruman'}",
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250
|
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]
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251
|
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nx.parse_multiline_adjlist(iter(lines)) # smoke test
|
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252
|
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with pytest.raises(TypeError):
|
|
253
|
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nx.parse_multiline_adjlist(iter(lines), nodetype=int)
|
|
254
|
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nx.parse_multiline_adjlist(iter(lines), edgetype=str) # smoke test
|
|
255
|
-
with pytest.raises(TypeError):
|
|
256
|
-
nx.parse_multiline_adjlist(iter(lines), nodetype=int)
|
|
257
|
-
lines = ["1 a"]
|
|
258
|
-
with pytest.raises(TypeError):
|
|
259
|
-
nx.parse_multiline_adjlist(iter(lines))
|
|
260
|
-
lines = ["a 2"]
|
|
261
|
-
with pytest.raises(TypeError):
|
|
262
|
-
nx.parse_multiline_adjlist(iter(lines), nodetype=int)
|
|
263
|
-
lines = ["1 2"]
|
|
264
|
-
with pytest.raises(TypeError):
|
|
265
|
-
nx.parse_multiline_adjlist(iter(lines))
|
|
266
|
-
lines = ["1 2", "2 {}"]
|
|
267
|
-
with pytest.raises(TypeError):
|
|
268
|
-
nx.parse_multiline_adjlist(iter(lines))
|
|
269
|
-
|
|
270
|
-
def test_multiline_adjlist_graph(self, tmp_path):
|
|
271
|
-
G = self.G
|
|
272
|
-
fname = tmp_path / "adjlist.txt"
|
|
273
|
-
nx.write_multiline_adjlist(G, fname)
|
|
274
|
-
H = nx.read_multiline_adjlist(fname)
|
|
275
|
-
H2 = nx.read_multiline_adjlist(fname)
|
|
276
|
-
assert H is not H2 # they should be different graphs
|
|
277
|
-
assert nodes_equal(list(H), list(G))
|
|
278
|
-
assert edges_equal(list(H.edges()), list(G.edges()))
|
|
279
|
-
|
|
280
|
-
def test_multiline_adjlist_digraph(self, tmp_path):
|
|
281
|
-
G = self.DG
|
|
282
|
-
fname = tmp_path / "adjlist.txt"
|
|
283
|
-
nx.write_multiline_adjlist(G, fname)
|
|
284
|
-
H = nx.read_multiline_adjlist(fname, create_using=nx.DiGraph())
|
|
285
|
-
H2 = nx.read_multiline_adjlist(fname, create_using=nx.DiGraph())
|
|
286
|
-
assert H is not H2 # they should be different graphs
|
|
287
|
-
assert nodes_equal(list(H), list(G))
|
|
288
|
-
assert edges_equal(list(H.edges()), list(G.edges()), directed=True)
|
|
289
|
-
|
|
290
|
-
def test_multiline_adjlist_integers(self, tmp_path):
|
|
291
|
-
fname = tmp_path / "adjlist.txt"
|
|
292
|
-
G = nx.convert_node_labels_to_integers(self.G)
|
|
293
|
-
nx.write_multiline_adjlist(G, fname)
|
|
294
|
-
H = nx.read_multiline_adjlist(fname, nodetype=int)
|
|
295
|
-
H2 = nx.read_multiline_adjlist(fname, nodetype=int)
|
|
296
|
-
assert H is not H2 # they should be different graphs
|
|
297
|
-
assert nodes_equal(list(H), list(G))
|
|
298
|
-
assert edges_equal(list(H.edges()), list(G.edges()))
|
|
299
|
-
|
|
300
|
-
def test_multiline_adjlist_multigraph(self, tmp_path):
|
|
301
|
-
G = self.XG
|
|
302
|
-
fname = tmp_path / "adjlist.txt"
|
|
303
|
-
nx.write_multiline_adjlist(G, fname)
|
|
304
|
-
H = nx.read_multiline_adjlist(fname, nodetype=int, create_using=nx.MultiGraph())
|
|
305
|
-
H2 = nx.read_multiline_adjlist(
|
|
306
|
-
fname, nodetype=int, create_using=nx.MultiGraph()
|
|
307
|
-
)
|
|
308
|
-
assert H is not H2 # they should be different graphs
|
|
309
|
-
assert nodes_equal(list(H), list(G))
|
|
310
|
-
assert edges_equal(list(H.edges()), list(G.edges()))
|
|
311
|
-
|
|
312
|
-
def test_multiline_adjlist_multidigraph(self, tmp_path):
|
|
313
|
-
G = self.XDG
|
|
314
|
-
fname = tmp_path / "adjlist.txt"
|
|
315
|
-
nx.write_multiline_adjlist(G, fname)
|
|
316
|
-
H = nx.read_multiline_adjlist(
|
|
317
|
-
fname, nodetype=int, create_using=nx.MultiDiGraph()
|
|
318
|
-
)
|
|
319
|
-
H2 = nx.read_multiline_adjlist(
|
|
320
|
-
fname, nodetype=int, create_using=nx.MultiDiGraph()
|
|
321
|
-
)
|
|
322
|
-
assert H is not H2 # they should be different graphs
|
|
323
|
-
assert nodes_equal(list(H), list(G))
|
|
324
|
-
assert edges_equal(list(H.edges()), list(G.edges()), directed=True)
|
|
325
|
-
|
|
326
|
-
def test_multiline_adjlist_delimiter(self):
|
|
327
|
-
fh = io.BytesIO()
|
|
328
|
-
G = nx.path_graph(3)
|
|
329
|
-
nx.write_multiline_adjlist(G, fh, delimiter=":")
|
|
330
|
-
fh.seek(0)
|
|
331
|
-
H = nx.read_multiline_adjlist(fh, nodetype=int, delimiter=":")
|
|
332
|
-
assert nodes_equal(list(H), list(G))
|
|
333
|
-
assert edges_equal(list(H.edges()), list(G.edges()))
|
|
334
|
-
|
|
335
|
-
|
|
336
|
-
@pytest.mark.parametrize(
|
|
337
|
-
("lines", "delim"),
|
|
338
|
-
(
|
|
339
|
-
(["1 2 5", "2 3 4", "3 5", "4", "5"], None), # No extra whitespace
|
|
340
|
-
(["1\t2\t5", "2\t3\t4", "3\t5", "4", "5"], "\t"), # tab-delimited
|
|
341
|
-
(
|
|
342
|
-
["1\t2\t5", "2\t3\t4", "3\t5\t", "4\t", "5"],
|
|
343
|
-
"\t",
|
|
344
|
-
), # tab-delimited, extra delims
|
|
345
|
-
(
|
|
346
|
-
["1\t2\t5", "2\t3\t4", "3\t5\t\t\n", "4\t", "5"],
|
|
347
|
-
"\t",
|
|
348
|
-
), # extra delim+newlines
|
|
349
|
-
),
|
|
350
|
-
)
|
|
351
|
-
def test_adjlist_rstrip_parsing(lines, delim):
|
|
352
|
-
"""Regression test related to gh-7465"""
|
|
353
|
-
expected = nx.Graph([(1, 2), (1, 5), (2, 3), (2, 4), (3, 5)])
|
|
354
|
-
nx.utils.graphs_equal(nx.parse_adjlist(lines, delimiter=delim), expected)
|
|
@@ -1,318 +0,0 @@
|
|
|
1
|
-
"""
|
|
2
|
-
Unit tests for edgelists.
|
|
3
|
-
"""
|
|
4
|
-
|
|
5
|
-
import io
|
|
6
|
-
import textwrap
|
|
7
|
-
|
|
8
|
-
import pytest
|
|
9
|
-
|
|
10
|
-
import networkx as nx
|
|
11
|
-
from networkx.utils import edges_equal, graphs_equal, nodes_equal
|
|
12
|
-
|
|
13
|
-
edges_no_data = textwrap.dedent(
|
|
14
|
-
"""
|
|
15
|
-
# comment line
|
|
16
|
-
1 2
|
|
17
|
-
# comment line
|
|
18
|
-
2 3
|
|
19
|
-
"""
|
|
20
|
-
)
|
|
21
|
-
|
|
22
|
-
|
|
23
|
-
edges_with_values = textwrap.dedent(
|
|
24
|
-
"""
|
|
25
|
-
# comment line
|
|
26
|
-
1 2 2.0
|
|
27
|
-
# comment line
|
|
28
|
-
2 3 3.0
|
|
29
|
-
"""
|
|
30
|
-
)
|
|
31
|
-
|
|
32
|
-
|
|
33
|
-
edges_with_weight = textwrap.dedent(
|
|
34
|
-
"""
|
|
35
|
-
# comment line
|
|
36
|
-
1 2 {'weight':2.0}
|
|
37
|
-
# comment line
|
|
38
|
-
2 3 {'weight':3.0}
|
|
39
|
-
"""
|
|
40
|
-
)
|
|
41
|
-
|
|
42
|
-
|
|
43
|
-
edges_with_multiple_attrs = textwrap.dedent(
|
|
44
|
-
"""
|
|
45
|
-
# comment line
|
|
46
|
-
1 2 {'weight':2.0, 'color':'green'}
|
|
47
|
-
# comment line
|
|
48
|
-
2 3 {'weight':3.0, 'color':'red'}
|
|
49
|
-
"""
|
|
50
|
-
)
|
|
51
|
-
|
|
52
|
-
|
|
53
|
-
edges_with_multiple_attrs_csv = textwrap.dedent(
|
|
54
|
-
"""
|
|
55
|
-
# comment line
|
|
56
|
-
1, 2, {'weight':2.0, 'color':'green'}
|
|
57
|
-
# comment line
|
|
58
|
-
2, 3, {'weight':3.0, 'color':'red'}
|
|
59
|
-
"""
|
|
60
|
-
)
|
|
61
|
-
|
|
62
|
-
|
|
63
|
-
_expected_edges_weights = [(1, 2, {"weight": 2.0}), (2, 3, {"weight": 3.0})]
|
|
64
|
-
_expected_edges_multiattr = [
|
|
65
|
-
(1, 2, {"weight": 2.0, "color": "green"}),
|
|
66
|
-
(2, 3, {"weight": 3.0, "color": "red"}),
|
|
67
|
-
]
|
|
68
|
-
|
|
69
|
-
|
|
70
|
-
@pytest.mark.parametrize(
|
|
71
|
-
("data", "extra_kwargs"),
|
|
72
|
-
(
|
|
73
|
-
(edges_no_data, {}),
|
|
74
|
-
(edges_with_values, {}),
|
|
75
|
-
(edges_with_weight, {}),
|
|
76
|
-
(edges_with_multiple_attrs, {}),
|
|
77
|
-
(edges_with_multiple_attrs_csv, {"delimiter": ","}),
|
|
78
|
-
),
|
|
79
|
-
)
|
|
80
|
-
def test_read_edgelist_no_data(data, extra_kwargs):
|
|
81
|
-
bytesIO = io.BytesIO(data.encode("utf-8"))
|
|
82
|
-
G = nx.read_edgelist(bytesIO, nodetype=int, data=False, **extra_kwargs)
|
|
83
|
-
assert edges_equal(G.edges(), [(1, 2), (2, 3)])
|
|
84
|
-
|
|
85
|
-
|
|
86
|
-
def test_read_weighted_edgelist():
|
|
87
|
-
bytesIO = io.BytesIO(edges_with_values.encode("utf-8"))
|
|
88
|
-
G = nx.read_weighted_edgelist(bytesIO, nodetype=int)
|
|
89
|
-
assert edges_equal(G.edges(data=True), _expected_edges_weights)
|
|
90
|
-
|
|
91
|
-
|
|
92
|
-
@pytest.mark.parametrize(
|
|
93
|
-
("data", "extra_kwargs", "expected"),
|
|
94
|
-
(
|
|
95
|
-
(edges_with_weight, {}, _expected_edges_weights),
|
|
96
|
-
(edges_with_multiple_attrs, {}, _expected_edges_multiattr),
|
|
97
|
-
(
|
|
98
|
-
edges_with_multiple_attrs_csv,
|
|
99
|
-
{"delimiter": ","},
|
|
100
|
-
_expected_edges_multiattr,
|
|
101
|
-
),
|
|
102
|
-
),
|
|
103
|
-
)
|
|
104
|
-
def test_read_edgelist_with_data(data, extra_kwargs, expected):
|
|
105
|
-
bytesIO = io.BytesIO(data.encode("utf-8"))
|
|
106
|
-
G = nx.read_edgelist(bytesIO, nodetype=int, **extra_kwargs)
|
|
107
|
-
assert edges_equal(G.edges(data=True), expected)
|
|
108
|
-
|
|
109
|
-
|
|
110
|
-
@pytest.fixture
|
|
111
|
-
def example_graph():
|
|
112
|
-
G = nx.Graph()
|
|
113
|
-
G.add_weighted_edges_from([(1, 2, 3.0), (2, 3, 27.0), (3, 4, 3.0)])
|
|
114
|
-
return G
|
|
115
|
-
|
|
116
|
-
|
|
117
|
-
def test_parse_edgelist_no_data(example_graph):
|
|
118
|
-
G = example_graph
|
|
119
|
-
H = nx.parse_edgelist(["1 2", "2 3", "3 4"], nodetype=int)
|
|
120
|
-
assert nodes_equal(G.nodes, H.nodes)
|
|
121
|
-
assert edges_equal(G.edges, H.edges)
|
|
122
|
-
|
|
123
|
-
|
|
124
|
-
def test_parse_edgelist_with_data_dict(example_graph):
|
|
125
|
-
G = example_graph
|
|
126
|
-
H = nx.parse_edgelist(
|
|
127
|
-
["1 2 {'weight': 3}", "2 3 {'weight': 27}", "3 4 {'weight': 3.0}"], nodetype=int
|
|
128
|
-
)
|
|
129
|
-
assert nodes_equal(G.nodes, H.nodes)
|
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130
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assert edges_equal(G.edges(data=True), H.edges(data=True))
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131
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-
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132
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133
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def test_parse_edgelist_with_data_list(example_graph):
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134
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G = example_graph
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135
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H = nx.parse_edgelist(
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136
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["1 2 3", "2 3 27", "3 4 3.0"], nodetype=int, data=(("weight", float),)
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137
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)
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138
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assert nodes_equal(G.nodes, H.nodes)
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139
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assert edges_equal(G.edges(data=True), H.edges(data=True))
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140
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-
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141
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-
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142
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def test_parse_edgelist():
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143
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# ignore lines with less than 2 nodes
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144
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lines = ["1;2", "2 3", "3 4"]
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145
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G = nx.parse_edgelist(lines, nodetype=int)
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146
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assert list(G.edges()) == [(2, 3), (3, 4)]
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147
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# unknown nodetype
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148
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with pytest.raises(TypeError, match="Failed to convert nodes"):
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149
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-
lines = ["1 2", "2 3", "3 4"]
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150
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nx.parse_edgelist(lines, nodetype="nope")
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151
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# lines have invalid edge format
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152
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with pytest.raises(TypeError, match="Failed to convert edge data"):
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153
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-
lines = ["1 2 3", "2 3", "3 4"]
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154
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nx.parse_edgelist(lines, nodetype=int)
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155
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# edge data and data_keys not the same length
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156
|
-
with pytest.raises(IndexError, match="not the same length"):
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157
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lines = ["1 2 3", "2 3 27", "3 4 3.0"]
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158
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nx.parse_edgelist(
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159
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-
lines, nodetype=int, data=(("weight", float), ("capacity", int))
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160
|
-
)
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161
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# edge data can't be converted to edge type
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162
|
-
with pytest.raises(TypeError, match="Failed to convert"):
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163
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lines = ["1 2 't1'", "2 3 't3'", "3 4 't3'"]
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164
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nx.parse_edgelist(lines, nodetype=int, data=(("weight", float),))
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165
|
-
|
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166
|
-
|
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167
|
-
def test_comments_None():
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168
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-
edgelist = ["node#1 node#2", "node#2 node#3"]
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169
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-
# comments=None supported to ignore all comment characters
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170
|
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G = nx.parse_edgelist(edgelist, comments=None)
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171
|
-
H = nx.Graph([e.split(" ") for e in edgelist])
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172
|
-
assert edges_equal(G.edges, H.edges)
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|
173
|
-
|
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174
|
-
|
|
175
|
-
class TestEdgelist:
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176
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-
@classmethod
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177
|
-
def setup_class(cls):
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178
|
-
cls.G = nx.Graph(name="test")
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179
|
-
e = [("a", "b"), ("b", "c"), ("c", "d"), ("d", "e"), ("e", "f"), ("a", "f")]
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180
|
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cls.G.add_edges_from(e)
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181
|
-
cls.G.add_node("g")
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|
182
|
-
cls.DG = nx.DiGraph(cls.G)
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|
183
|
-
cls.XG = nx.MultiGraph()
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|
184
|
-
cls.XG.add_weighted_edges_from([(1, 2, 5), (1, 2, 5), (1, 2, 1), (3, 3, 42)])
|
|
185
|
-
cls.XDG = nx.MultiDiGraph(cls.XG)
|
|
186
|
-
|
|
187
|
-
def test_write_edgelist_1(self):
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|
188
|
-
fh = io.BytesIO()
|
|
189
|
-
G = nx.Graph()
|
|
190
|
-
G.add_edges_from([(1, 2), (2, 3)])
|
|
191
|
-
nx.write_edgelist(G, fh, data=False)
|
|
192
|
-
fh.seek(0)
|
|
193
|
-
assert fh.read() == b"1 2\n2 3\n"
|
|
194
|
-
|
|
195
|
-
def test_write_edgelist_2(self):
|
|
196
|
-
fh = io.BytesIO()
|
|
197
|
-
G = nx.Graph()
|
|
198
|
-
G.add_edges_from([(1, 2), (2, 3)])
|
|
199
|
-
nx.write_edgelist(G, fh, data=True)
|
|
200
|
-
fh.seek(0)
|
|
201
|
-
assert fh.read() == b"1 2 {}\n2 3 {}\n"
|
|
202
|
-
|
|
203
|
-
def test_write_edgelist_3(self):
|
|
204
|
-
fh = io.BytesIO()
|
|
205
|
-
G = nx.Graph()
|
|
206
|
-
G.add_edge(1, 2, weight=2.0)
|
|
207
|
-
G.add_edge(2, 3, weight=3.0)
|
|
208
|
-
nx.write_edgelist(G, fh, data=True)
|
|
209
|
-
fh.seek(0)
|
|
210
|
-
assert fh.read() == b"1 2 {'weight': 2.0}\n2 3 {'weight': 3.0}\n"
|
|
211
|
-
|
|
212
|
-
def test_write_edgelist_4(self):
|
|
213
|
-
fh = io.BytesIO()
|
|
214
|
-
G = nx.Graph()
|
|
215
|
-
G.add_edge(1, 2, weight=2.0)
|
|
216
|
-
G.add_edge(2, 3, weight=3.0)
|
|
217
|
-
nx.write_edgelist(G, fh, data=[("weight")])
|
|
218
|
-
fh.seek(0)
|
|
219
|
-
assert fh.read() == b"1 2 2.0\n2 3 3.0\n"
|
|
220
|
-
|
|
221
|
-
def test_unicode(self, tmp_path):
|
|
222
|
-
G = nx.Graph()
|
|
223
|
-
name1 = chr(2344) + chr(123) + chr(6543)
|
|
224
|
-
name2 = chr(5543) + chr(1543) + chr(324)
|
|
225
|
-
G.add_edge(name1, "Radiohead", **{name2: 3})
|
|
226
|
-
fname = tmp_path / "el.txt"
|
|
227
|
-
nx.write_edgelist(G, fname)
|
|
228
|
-
H = nx.read_edgelist(fname)
|
|
229
|
-
assert graphs_equal(G, H)
|
|
230
|
-
|
|
231
|
-
def test_latin1_issue(self, tmp_path):
|
|
232
|
-
G = nx.Graph()
|
|
233
|
-
name1 = chr(2344) + chr(123) + chr(6543)
|
|
234
|
-
name2 = chr(5543) + chr(1543) + chr(324)
|
|
235
|
-
G.add_edge(name1, "Radiohead", **{name2: 3})
|
|
236
|
-
fname = tmp_path / "el.txt"
|
|
237
|
-
with pytest.raises(UnicodeEncodeError):
|
|
238
|
-
nx.write_edgelist(G, fname, encoding="latin-1")
|
|
239
|
-
|
|
240
|
-
def test_latin1(self, tmp_path):
|
|
241
|
-
G = nx.Graph()
|
|
242
|
-
name1 = "Bj" + chr(246) + "rk"
|
|
243
|
-
name2 = chr(220) + "ber"
|
|
244
|
-
G.add_edge(name1, "Radiohead", **{name2: 3})
|
|
245
|
-
fname = tmp_path / "el.txt"
|
|
246
|
-
|
|
247
|
-
nx.write_edgelist(G, fname, encoding="latin-1")
|
|
248
|
-
H = nx.read_edgelist(fname, encoding="latin-1")
|
|
249
|
-
assert graphs_equal(G, H)
|
|
250
|
-
|
|
251
|
-
def test_edgelist_graph(self, tmp_path):
|
|
252
|
-
G = self.G
|
|
253
|
-
fname = tmp_path / "el.txt"
|
|
254
|
-
nx.write_edgelist(G, fname)
|
|
255
|
-
H = nx.read_edgelist(fname)
|
|
256
|
-
H2 = nx.read_edgelist(fname)
|
|
257
|
-
assert H is not H2 # they should be different graphs
|
|
258
|
-
G.remove_node("g") # isolated nodes are not written in edgelist
|
|
259
|
-
assert nodes_equal(list(H), list(G))
|
|
260
|
-
assert edges_equal(list(H.edges()), list(G.edges()))
|
|
261
|
-
|
|
262
|
-
def test_edgelist_digraph(self, tmp_path):
|
|
263
|
-
G = self.DG
|
|
264
|
-
fname = tmp_path / "el.txt"
|
|
265
|
-
nx.write_edgelist(G, fname)
|
|
266
|
-
H = nx.read_edgelist(fname, create_using=nx.DiGraph())
|
|
267
|
-
H2 = nx.read_edgelist(fname, create_using=nx.DiGraph())
|
|
268
|
-
assert H is not H2 # they should be different graphs
|
|
269
|
-
G.remove_node("g") # isolated nodes are not written in edgelist
|
|
270
|
-
assert nodes_equal(list(H), list(G))
|
|
271
|
-
assert edges_equal(list(H.edges()), list(G.edges()), directed=True)
|
|
272
|
-
|
|
273
|
-
def test_edgelist_integers(self, tmp_path):
|
|
274
|
-
G = nx.convert_node_labels_to_integers(self.G)
|
|
275
|
-
fname = tmp_path / "el.txt"
|
|
276
|
-
nx.write_edgelist(G, fname)
|
|
277
|
-
H = nx.read_edgelist(fname, nodetype=int)
|
|
278
|
-
# isolated nodes are not written in edgelist
|
|
279
|
-
G.remove_nodes_from(list(nx.isolates(G)))
|
|
280
|
-
assert nodes_equal(list(H), list(G))
|
|
281
|
-
assert edges_equal(list(H.edges()), list(G.edges()))
|
|
282
|
-
|
|
283
|
-
def test_edgelist_multigraph(self, tmp_path):
|
|
284
|
-
G = self.XG
|
|
285
|
-
fname = tmp_path / "el.txt"
|
|
286
|
-
nx.write_edgelist(G, fname)
|
|
287
|
-
H = nx.read_edgelist(fname, nodetype=int, create_using=nx.MultiGraph())
|
|
288
|
-
H2 = nx.read_edgelist(fname, nodetype=int, create_using=nx.MultiGraph())
|
|
289
|
-
assert H is not H2 # they should be different graphs
|
|
290
|
-
assert nodes_equal(list(H), list(G))
|
|
291
|
-
assert edges_equal(list(H.edges()), list(G.edges()))
|
|
292
|
-
|
|
293
|
-
def test_edgelist_multidigraph(self, tmp_path):
|
|
294
|
-
G = self.XDG
|
|
295
|
-
fname = tmp_path / "el.txt"
|
|
296
|
-
nx.write_edgelist(G, fname)
|
|
297
|
-
H = nx.read_edgelist(fname, nodetype=int, create_using=nx.MultiDiGraph())
|
|
298
|
-
H2 = nx.read_edgelist(fname, nodetype=int, create_using=nx.MultiDiGraph())
|
|
299
|
-
assert H is not H2 # they should be different graphs
|
|
300
|
-
assert nodes_equal(list(H), list(G))
|
|
301
|
-
assert edges_equal(list(H.edges()), list(G.edges()), directed=True)
|
|
302
|
-
|
|
303
|
-
|
|
304
|
-
def test_edgelist_consistent_strip_handling():
|
|
305
|
-
"""See gh-7462
|
|
306
|
-
|
|
307
|
-
Input when printed looks like::
|
|
308
|
-
|
|
309
|
-
1 2 3
|
|
310
|
-
2 3
|
|
311
|
-
3 4 3.0
|
|
312
|
-
|
|
313
|
-
Note the trailing \\t after the `3` in the second row, indicating an empty
|
|
314
|
-
data value.
|
|
315
|
-
"""
|
|
316
|
-
s = io.StringIO("1\t2\t3\n2\t3\t\n3\t4\t3.0")
|
|
317
|
-
G = nx.parse_edgelist(s, delimiter="\t", nodetype=int, data=[("value", str)])
|
|
318
|
-
assert sorted(G.edges(data="value")) == [(1, 2, "3"), (2, 3, ""), (3, 4, "3.0")]
|