nmr-processing 9.5.0 → 9.5.1-pre.1685396168
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/lib/apodization/apodization.d.ts +6 -5
- package/lib/apodization/apodization.js +4 -1
- package/lib/apodization/apodization.js.map +1 -1
- package/lib/apodization/applyWindow.js.map +1 -1
- package/lib/apodization/compose.js.map +1 -1
- package/lib/apodization/getFunction.js +3 -0
- package/lib/apodization/getFunction.js.map +1 -1
- package/lib/apodization/shapes/WindowFunctions.d.ts +6 -1
- package/lib/apodization/shapes/sineBell.d.ts +27 -0
- package/lib/apodization/shapes/sineBell.js +17 -0
- package/lib/apodization/shapes/sineBell.js.map +1 -0
- package/lib/apodization/utils/getData.js.map +1 -1
- package/lib/constants/SignalsKinds.d.ts +9 -0
- package/lib/constants/SignalsKinds.js +40 -0
- package/lib/constants/SignalsKinds.js.map +1 -0
- package/lib/datum/Entry1D.d.ts +10 -0
- package/lib/datum/Entry1D.js +3 -0
- package/lib/datum/Entry1D.js.map +1 -0
- package/lib/datum/ExclusionZone.d.ts +5 -0
- package/lib/datum/ExclusionZone.js +3 -0
- package/lib/datum/ExclusionZone.js.map +1 -0
- package/lib/datum/Filters.d.ts +13 -0
- package/lib/datum/Filters.js +49 -0
- package/lib/datum/Filters.js.map +1 -0
- package/lib/datum/FiltersManager.d.ts +30 -0
- package/lib/datum/FiltersManager.js +184 -0
- package/lib/datum/FiltersManager.js.map +1 -0
- package/lib/datum/MatrixFilter.d.ts +39 -0
- package/lib/datum/MatrixFilter.js +3 -0
- package/lib/datum/MatrixFilter.js.map +1 -0
- package/lib/datum/MatrixOptions.d.ts +28 -0
- package/lib/datum/MatrixOptions.js +3 -0
- package/lib/datum/MatrixOptions.js.map +1 -0
- package/lib/datum/data1d/filter1d/apodization.d.ts +26 -0
- package/lib/datum/data1d/filter1d/apodization.js +75 -0
- package/lib/datum/data1d/filter1d/apodization.js.map +1 -0
- package/lib/datum/data1d/filter1d/baselineCorrection.d.ts +32 -0
- package/lib/datum/data1d/filter1d/baselineCorrection.js +61 -0
- package/lib/datum/data1d/filter1d/baselineCorrection.js.map +1 -0
- package/lib/datum/data1d/filter1d/digitalFilter.d.ts +18 -0
- package/lib/datum/data1d/filter1d/digitalFilter.js +47 -0
- package/lib/datum/data1d/filter1d/digitalFilter.js.map +1 -0
- package/lib/datum/data1d/filter1d/equallySpaced.d.ts +29 -0
- package/lib/datum/data1d/filter1d/equallySpaced.js +55 -0
- package/lib/datum/data1d/filter1d/equallySpaced.js.map +1 -0
- package/lib/datum/data1d/filter1d/exclusionZones.d.ts +11 -0
- package/lib/datum/data1d/filter1d/exclusionZones.js +35 -0
- package/lib/datum/data1d/filter1d/exclusionZones.js.map +1 -0
- package/lib/datum/data1d/filter1d/fft.d.ts +14 -0
- package/lib/datum/data1d/filter1d/fft.js +94 -0
- package/lib/datum/data1d/filter1d/fft.js.map +1 -0
- package/lib/datum/data1d/filter1d/phaseCorrection.d.ts +33 -0
- package/lib/datum/data1d/filter1d/phaseCorrection.js +84 -0
- package/lib/datum/data1d/filter1d/phaseCorrection.js.map +1 -0
- package/lib/datum/data1d/filter1d/shiftX.d.ts +16 -0
- package/lib/datum/data1d/filter1d/shiftX.js +30 -0
- package/lib/datum/data1d/filter1d/shiftX.js.map +1 -0
- package/lib/datum/data1d/filter1d/signalProcessing.d.ts +17 -0
- package/lib/datum/data1d/filter1d/signalProcessing.js +88 -0
- package/lib/datum/data1d/filter1d/signalProcessing.js.map +1 -0
- package/lib/datum/data1d/filter1d/utils/padDataToNextPowerOfTwo.d.ts +5 -0
- package/lib/datum/data1d/filter1d/utils/padDataToNextPowerOfTwo.js +41 -0
- package/lib/datum/data1d/filter1d/utils/padDataToNextPowerOfTwo.js.map +1 -0
- package/lib/datum/data1d/filter1d/zeroFilling.d.ts +18 -0
- package/lib/datum/data1d/filter1d/zeroFilling.js +68 -0
- package/lib/datum/data1d/filter1d/zeroFilling.js.map +1 -0
- package/lib/datum/data1d/updateRelatives.d.ts +4 -0
- package/lib/datum/data1d/updateRelatives.js +36 -0
- package/lib/datum/data1d/updateRelatives.js.map +1 -0
- package/lib/datum/data1d/utils/RangeUtilities.d.ts +22 -0
- package/lib/datum/data1d/utils/RangeUtilities.js +83 -0
- package/lib/datum/data1d/utils/RangeUtilities.js.map +1 -0
- package/lib/datum/data1d/utils/checkIntegralKind.d.ts +7 -0
- package/lib/datum/data1d/utils/checkIntegralKind.js +14 -0
- package/lib/datum/data1d/utils/checkIntegralKind.js.map +1 -0
- package/lib/datum/data1d/utils/checkRangeKind.d.ts +2 -0
- package/lib/datum/data1d/utils/checkRangeKind.js +10 -0
- package/lib/datum/data1d/utils/checkRangeKind.js.map +1 -0
- package/lib/datum/data1d/utils/getShiftX.d.ts +2 -0
- package/lib/datum/data1d/utils/getShiftX.js +11 -0
- package/lib/datum/data1d/utils/getShiftX.js.map +1 -0
- package/lib/datum/data1d/utils/getSpectrumErrorValue.d.ts +2 -0
- package/lib/datum/data1d/utils/getSpectrumErrorValue.js +9 -0
- package/lib/datum/data1d/utils/getSpectrumErrorValue.js.map +1 -0
- package/lib/datum/data1d/utils/mapIntegrals.d.ts +13 -0
- package/lib/datum/data1d/utils/mapIntegrals.js +41 -0
- package/lib/datum/data1d/utils/mapIntegrals.js.map +1 -0
- package/lib/datum/data1d/utils/mapPeaks.d.ts +4 -0
- package/lib/datum/data1d/utils/mapPeaks.js +51 -0
- package/lib/datum/data1d/utils/mapPeaks.js.map +1 -0
- package/lib/datum/data1d/utils/mapRanges.d.ts +38 -0
- package/lib/datum/data1d/utils/mapRanges.js +84 -0
- package/lib/datum/data1d/utils/mapRanges.js.map +1 -0
- package/lib/datum/data1d/utils/updateIntegrals.d.ts +2 -0
- package/lib/datum/data1d/utils/updateIntegrals.js +11 -0
- package/lib/datum/data1d/utils/updateIntegrals.js.map +1 -0
- package/lib/datum/data1d/utils/updateIntegralsRelativeValues.d.ts +2 -0
- package/lib/datum/data1d/utils/updateIntegralsRelativeValues.js +10 -0
- package/lib/datum/data1d/utils/updateIntegralsRelativeValues.js.map +1 -0
- package/lib/datum/data1d/utils/updatePeaks.d.ts +2 -0
- package/lib/datum/data1d/utils/updatePeaks.js +12 -0
- package/lib/datum/data1d/utils/updatePeaks.js.map +1 -0
- package/lib/datum/data1d/utils/updateRanges.d.ts +2 -0
- package/lib/datum/data1d/utils/updateRanges.js +14 -0
- package/lib/datum/data1d/utils/updateRanges.js.map +1 -0
- package/lib/datum/data1d/utils/updateRangesRelativeValues.d.ts +2 -0
- package/lib/datum/data1d/utils/updateRangesRelativeValues.js +10 -0
- package/lib/datum/data1d/utils/updateRangesRelativeValues.js.map +1 -0
- package/lib/datum/data2d/filter2d/shiftX.d.ts +16 -0
- package/lib/datum/data2d/filter2d/shiftX.js +34 -0
- package/lib/datum/data2d/filter2d/shiftX.js.map +1 -0
- package/lib/datum/data2d/filter2d/shiftY.d.ts +16 -0
- package/lib/datum/data2d/filter2d/shiftY.js +34 -0
- package/lib/datum/data2d/filter2d/shiftY.js.map +1 -0
- package/lib/datum/data2d/utils/get2DSpectrumErrorValue.d.ts +6 -0
- package/lib/datum/data2d/utils/get2DSpectrumErrorValue.js +14 -0
- package/lib/datum/data2d/utils/get2DSpectrumErrorValue.js.map +1 -0
- package/lib/datum/data2d/utils/getShift.d.ts +6 -0
- package/lib/datum/data2d/utils/getShift.js +20 -0
- package/lib/datum/data2d/utils/getShift.js.map +1 -0
- package/lib/datum/data2d/utils/isZoneExists.d.ts +4 -0
- package/lib/datum/data2d/utils/isZoneExists.js +21 -0
- package/lib/datum/data2d/utils/isZoneExists.js.map +1 -0
- package/lib/datum/data2d/utils/mapZones.d.ts +34 -0
- package/lib/datum/data2d/utils/mapZones.js +68 -0
- package/lib/datum/data2d/utils/mapZones.js.map +1 -0
- package/lib/datum/data2d/utils/updateZones.d.ts +2 -0
- package/lib/datum/data2d/utils/updateZones.js +12 -0
- package/lib/datum/data2d/utils/updateZones.js.map +1 -0
- package/lib/index.d.ts +35 -0
- package/lib/index.js +27 -0
- package/lib/index.js.map +1 -1
- package/lib/signals/signalsToRanges.js.map +1 -1
- package/lib/signals/simulation/simulateXYPeaks.js.map +1 -1
- package/lib/signals/utils/jAnalyzer.d.ts +11 -8
- package/lib/signals/utils/jAnalyzer.js.map +1 -1
- package/lib/types/ContourOptions.d.ts +10 -0
- package/lib/types/ContourOptions.js +3 -0
- package/lib/types/ContourOptions.js.map +1 -0
- package/lib/types/Data1D.d.ts +5 -0
- package/lib/types/Data1D.js +3 -0
- package/lib/types/Data1D.js.map +1 -0
- package/lib/types/Data2D.d.ts +5 -0
- package/{lib-esm/xyz → lib/types}/Data2D.js.map +1 -1
- package/lib/types/Display.d.ts +3 -0
- package/lib/types/Display.js +3 -0
- package/lib/types/Display.js.map +1 -0
- package/lib/types/Display1D.d.ts +7 -0
- package/lib/types/Display1D.js +3 -0
- package/lib/types/Display1D.js.map +1 -0
- package/lib/types/Display2D.d.ts +11 -0
- package/lib/types/Display2D.js +3 -0
- package/lib/types/Display2D.js.map +1 -0
- package/lib/types/Filter.d.ts +11 -0
- package/lib/types/Filter.js +3 -0
- package/lib/types/Filter.js.map +1 -0
- package/lib/types/Info/Info.d.ts +15 -0
- package/lib/types/Info/Info.js +3 -0
- package/lib/types/Info/Info.js.map +1 -0
- package/lib/types/Info/Info1D.d.ts +13 -0
- package/lib/types/Info/Info1D.js +3 -0
- package/lib/types/Info/Info1D.js.map +1 -0
- package/lib/types/Info/Info2D.d.ts +10 -0
- package/lib/types/Info/Info2D.js +3 -0
- package/lib/types/Info/Info2D.js.map +1 -0
- package/lib/types/Integral.d.ts +10 -0
- package/lib/types/Integral.js +3 -0
- package/lib/types/Integral.js.map +1 -0
- package/lib/types/Integrals.d.ts +6 -0
- package/lib/types/Integrals.js +3 -0
- package/lib/types/Integrals.js.map +1 -0
- package/lib/types/Jcoupling.d.ts +5 -0
- package/lib/types/Jcoupling.js +3 -0
- package/lib/types/Jcoupling.js.map +1 -0
- package/lib/types/ObjectXY.d.ts +4 -0
- package/lib/types/ObjectXY.js +3 -0
- package/lib/types/ObjectXY.js.map +1 -0
- package/lib/types/Options/DataSelectionOption.d.ts +1 -0
- package/lib/types/Options/DataSelectionOption.js +3 -0
- package/lib/types/Options/DataSelectionOption.js.map +1 -0
- package/lib/types/Options/JcampParsingOptions.d.ts +30 -0
- package/lib/types/Options/JcampParsingOptions.js +3 -0
- package/lib/types/Options/JcampParsingOptions.js.map +1 -0
- package/lib/types/Options/NmredataParsingOptions.d.ts +14 -0
- package/lib/types/Options/NmredataParsingOptions.js +3 -0
- package/lib/types/Options/NmredataParsingOptions.js.map +1 -0
- package/lib/types/Options/ParsingOptions.d.ts +74 -0
- package/lib/types/Options/ParsingOptions.js +3 -0
- package/lib/types/Options/ParsingOptions.js.map +1 -0
- package/lib/types/Options/SumOptions.d.ts +24 -0
- package/lib/types/Options/SumOptions.js +3 -0
- package/lib/types/Options/SumOptions.js.map +1 -0
- package/lib/types/Peaks/BasePeak.d.ts +3 -0
- package/lib/types/Peaks/BasePeak.js +3 -0
- package/lib/types/Peaks/BasePeak.js.map +1 -0
- package/lib/types/Peaks/Peak1D.d.ts +5 -0
- package/lib/types/Peaks/Peak1D.js +3 -0
- package/lib/types/Peaks/Peak1D.js.map +1 -0
- package/lib/types/Peaks/Peak2D.d.ts +13 -0
- package/lib/types/Peaks/Peak2D.js +3 -0
- package/lib/types/Peaks/Peak2D.js.map +1 -0
- package/lib/types/Peaks/Peaks.d.ts +5 -0
- package/lib/types/Peaks/Peaks.js +3 -0
- package/lib/types/Peaks/Peaks.js.map +1 -0
- package/lib/types/Ranges/Ranges.d.ts +16 -0
- package/lib/types/Ranges/Ranges.js +3 -0
- package/lib/types/Ranges/Ranges.js.map +1 -0
- package/lib/types/Signals/Signal.d.ts +4 -0
- package/lib/types/Signals/Signal.js +3 -0
- package/lib/types/Signals/Signal.js.map +1 -0
- package/lib/types/Signals/Signal1D.d.ts +6 -0
- package/lib/types/Signals/Signal1D.js +3 -0
- package/lib/types/Signals/Signal1D.js.map +1 -0
- package/lib/types/Signals/Signal2D.d.ts +18 -0
- package/lib/types/Signals/Signal2D.js +3 -0
- package/lib/types/Signals/Signal2D.js.map +1 -0
- package/lib/types/Spectrum/BaseSpectrum.d.ts +7 -0
- package/lib/types/Spectrum/BaseSpectrum.js +3 -0
- package/lib/types/Spectrum/BaseSpectrum.js.map +1 -0
- package/lib/types/Spectrum/Spectrum.d.ts +3 -0
- package/lib/types/Spectrum/Spectrum.js +3 -0
- package/lib/types/Spectrum/Spectrum.js.map +1 -0
- package/lib/types/Spectrum/Spectrum1D.d.ts +20 -0
- package/lib/types/Spectrum/Spectrum1D.js +3 -0
- package/lib/types/Spectrum/Spectrum1D.js.map +1 -0
- package/lib/types/Spectrum/Spectrum2D.d.ts +16 -0
- package/lib/types/Spectrum/Spectrum2D.js +3 -0
- package/lib/types/Spectrum/Spectrum2D.js.map +1 -0
- package/lib/types/Zones/Zone.d.ts +13 -0
- package/lib/types/Zones/Zone.js +3 -0
- package/lib/types/Zones/Zone.js.map +1 -0
- package/lib/types/Zones/Zones.d.ts +5 -0
- package/lib/types/Zones/Zones.js +3 -0
- package/lib/types/Zones/Zones.js.map +1 -0
- package/lib/types/common/MapOptions.d.ts +5 -0
- package/lib/types/common/MapOptions.js +3 -0
- package/lib/types/common/MapOptions.js.map +1 -0
- package/lib/utilities/checkData2DFid.d.ts +3 -0
- package/lib/utilities/checkData2DFid.js +10 -0
- package/lib/utilities/checkData2DFid.js.map +1 -0
- package/lib/utilities/cloneData1D.d.ts +6 -0
- package/lib/utilities/cloneData1D.js +9 -0
- package/lib/utilities/cloneData1D.js.map +1 -0
- package/lib/utilities/cloneData2D.d.ts +2 -0
- package/lib/utilities/cloneData2D.js +28 -0
- package/lib/utilities/cloneData2D.js.map +1 -0
- package/lib/utilities/getSum.d.ts +8 -0
- package/lib/utilities/getSum.js +25 -0
- package/lib/utilities/getSum.js.map +1 -0
- package/lib/xyz/Entry2D.d.ts +10 -0
- package/lib/xyz/Entry2D.js +3 -0
- package/lib/xyz/Entry2D.js.map +1 -0
- package/lib/xyz/quadrature.d.ts +7 -0
- package/lib/xyz/quadrature.js +54 -0
- package/lib/xyz/quadrature.js.map +1 -0
- package/lib/xyz/util/fft2d/digitalFilter.d.ts +7 -0
- package/lib/xyz/util/fft2d/digitalFilter.js +20 -0
- package/lib/xyz/util/fft2d/digitalFilter.js.map +1 -0
- package/lib/xyz/util/fft2d/fftDirectDimension.d.ts +24 -0
- package/lib/xyz/util/fft2d/fftDirectDimension.js +57 -0
- package/lib/xyz/util/fft2d/fftDirectDimension.js.map +1 -0
- package/lib/xyz/util/fft2d/fftIndirectDimension.d.ts +23 -0
- package/lib/xyz/util/fft2d/fftIndirectDimension.js +72 -0
- package/lib/xyz/util/fft2d/fftIndirectDimension.js.map +1 -0
- package/lib/xyz/util/fft2d/removeDCOffset.d.ts +5 -0
- package/lib/xyz/util/fft2d/removeDCOffset.js +19 -0
- package/lib/xyz/util/fft2d/removeDCOffset.js.map +1 -0
- package/lib/xyz/util/fft2d/zeroFilling.d.ts +10 -0
- package/lib/xyz/util/fft2d/zeroFilling.js +29 -0
- package/lib/xyz/util/fft2d/zeroFilling.js.map +1 -0
- package/lib/xyz/util/padData.d.ts +5 -3
- package/lib/xyz/util/padData.js +7 -7
- package/lib/xyz/util/padData.js.map +1 -1
- package/lib/xyz/xyzAutoSignalsPicking.d.ts +2 -2
- package/lib/xyz/xyzAutoSignalsPicking.js.map +1 -1
- package/lib/xyz/xyzAutoZonesPicking.d.ts +2 -8
- package/lib/xyz/xyzAutoZonesPicking.js.map +1 -1
- package/lib/xyz/xyzBidimensionalFFT.d.ts +40 -0
- package/lib/xyz/xyzBidimensionalFFT.js +79 -0
- package/lib/xyz/xyzBidimensionalFFT.js.map +1 -0
- package/lib/xyz/xyzJResAnalyzer.d.ts +1 -4
- package/lib/xyz/xyzJResAnalyzer.js +35 -26
- package/lib/xyz/xyzJResAnalyzer.js.map +1 -1
- package/lib-esm/apodization/apodization.js +4 -1
- package/lib-esm/apodization/apodization.js.map +1 -1
- package/lib-esm/apodization/applyWindow.js.map +1 -1
- package/lib-esm/apodization/compose.js.map +1 -1
- package/lib-esm/apodization/getFunction.js +3 -0
- package/lib-esm/apodization/getFunction.js.map +1 -1
- package/lib-esm/apodization/shapes/sineBell.js +13 -0
- package/lib-esm/apodization/shapes/sineBell.js.map +1 -0
- package/lib-esm/apodization/utils/getData.js.map +1 -1
- package/lib-esm/constants/SignalsKinds.js +37 -0
- package/lib-esm/constants/SignalsKinds.js.map +1 -0
- package/lib-esm/datum/Entry1D.js +2 -0
- package/lib-esm/datum/Entry1D.js.map +1 -0
- package/lib-esm/datum/ExclusionZone.js +2 -0
- package/lib-esm/datum/ExclusionZone.js.map +1 -0
- package/lib-esm/datum/Filters.js +23 -0
- package/lib-esm/datum/Filters.js.map +1 -0
- package/lib-esm/datum/FiltersManager.js +175 -0
- package/lib-esm/datum/FiltersManager.js.map +1 -0
- package/lib-esm/datum/MatrixFilter.js +2 -0
- package/lib-esm/datum/MatrixFilter.js.map +1 -0
- package/lib-esm/datum/MatrixOptions.js +2 -0
- package/lib-esm/datum/MatrixOptions.js.map +1 -0
- package/lib-esm/datum/data1d/filter1d/apodization.js +68 -0
- package/lib-esm/datum/data1d/filter1d/apodization.js.map +1 -0
- package/lib-esm/datum/data1d/filter1d/baselineCorrection.js +52 -0
- package/lib-esm/datum/data1d/filter1d/baselineCorrection.js.map +1 -0
- package/lib-esm/datum/data1d/filter1d/digitalFilter.js +41 -0
- package/lib-esm/datum/data1d/filter1d/digitalFilter.js.map +1 -0
- package/lib-esm/datum/data1d/filter1d/equallySpaced.js +49 -0
- package/lib-esm/datum/data1d/filter1d/equallySpaced.js.map +1 -0
- package/lib-esm/datum/data1d/filter1d/exclusionZones.js +29 -0
- package/lib-esm/datum/data1d/filter1d/exclusionZones.js.map +1 -0
- package/lib-esm/datum/data1d/filter1d/fft.js +88 -0
- package/lib-esm/datum/data1d/filter1d/fft.js.map +1 -0
- package/lib-esm/datum/data1d/filter1d/phaseCorrection.js +78 -0
- package/lib-esm/datum/data1d/filter1d/phaseCorrection.js.map +1 -0
- package/lib-esm/datum/data1d/filter1d/shiftX.js +24 -0
- package/lib-esm/datum/data1d/filter1d/shiftX.js.map +1 -0
- package/lib-esm/datum/data1d/filter1d/signalProcessing.js +58 -0
- package/lib-esm/datum/data1d/filter1d/signalProcessing.js.map +1 -0
- package/lib-esm/datum/data1d/filter1d/utils/padDataToNextPowerOfTwo.js +37 -0
- package/lib-esm/datum/data1d/filter1d/utils/padDataToNextPowerOfTwo.js.map +1 -0
- package/lib-esm/datum/data1d/filter1d/zeroFilling.js +62 -0
- package/lib-esm/datum/data1d/filter1d/zeroFilling.js.map +1 -0
- package/lib-esm/datum/data1d/updateRelatives.js +32 -0
- package/lib-esm/datum/data1d/updateRelatives.js.map +1 -0
- package/lib-esm/datum/data1d/utils/RangeUtilities.js +69 -0
- package/lib-esm/datum/data1d/utils/RangeUtilities.js.map +1 -0
- package/lib-esm/datum/data1d/utils/checkIntegralKind.js +10 -0
- package/lib-esm/datum/data1d/utils/checkIntegralKind.js.map +1 -0
- package/lib-esm/datum/data1d/utils/checkRangeKind.js +6 -0
- package/lib-esm/datum/data1d/utils/checkRangeKind.js.map +1 -0
- package/lib-esm/datum/data1d/utils/getShiftX.js +7 -0
- package/lib-esm/datum/data1d/utils/getShiftX.js.map +1 -0
- package/lib-esm/datum/data1d/utils/getSpectrumErrorValue.js +5 -0
- package/lib-esm/datum/data1d/utils/getSpectrumErrorValue.js.map +1 -0
- package/lib-esm/datum/data1d/utils/mapIntegrals.js +37 -0
- package/lib-esm/datum/data1d/utils/mapIntegrals.js.map +1 -0
- package/lib-esm/datum/data1d/utils/mapPeaks.js +47 -0
- package/lib-esm/datum/data1d/utils/mapPeaks.js.map +1 -0
- package/lib-esm/datum/data1d/utils/mapRanges.js +80 -0
- package/lib-esm/datum/data1d/utils/mapRanges.js.map +1 -0
- package/lib-esm/datum/data1d/utils/updateIntegrals.js +7 -0
- package/lib-esm/datum/data1d/utils/updateIntegrals.js.map +1 -0
- package/lib-esm/datum/data1d/utils/updateIntegralsRelativeValues.js +6 -0
- package/lib-esm/datum/data1d/utils/updateIntegralsRelativeValues.js.map +1 -0
- package/lib-esm/datum/data1d/utils/updatePeaks.js +8 -0
- package/lib-esm/datum/data1d/utils/updatePeaks.js.map +1 -0
- package/lib-esm/datum/data1d/utils/updateRanges.js +10 -0
- package/lib-esm/datum/data1d/utils/updateRanges.js.map +1 -0
- package/lib-esm/datum/data1d/utils/updateRangesRelativeValues.js +6 -0
- package/lib-esm/datum/data1d/utils/updateRangesRelativeValues.js.map +1 -0
- package/lib-esm/datum/data2d/filter2d/shiftX.js +28 -0
- package/lib-esm/datum/data2d/filter2d/shiftX.js.map +1 -0
- package/lib-esm/datum/data2d/filter2d/shiftY.js +28 -0
- package/lib-esm/datum/data2d/filter2d/shiftY.js.map +1 -0
- package/lib-esm/datum/data2d/utils/get2DSpectrumErrorValue.js +10 -0
- package/lib-esm/datum/data2d/utils/get2DSpectrumErrorValue.js.map +1 -0
- package/lib-esm/datum/data2d/utils/getShift.js +16 -0
- package/lib-esm/datum/data2d/utils/getShift.js.map +1 -0
- package/lib-esm/datum/data2d/utils/isZoneExists.js +17 -0
- package/lib-esm/datum/data2d/utils/isZoneExists.js.map +1 -0
- package/lib-esm/datum/data2d/utils/mapZones.js +64 -0
- package/lib-esm/datum/data2d/utils/mapZones.js.map +1 -0
- package/lib-esm/datum/data2d/utils/updateZones.js +8 -0
- package/lib-esm/datum/data2d/utils/updateZones.js.map +1 -0
- package/lib-esm/index.js +14 -0
- package/lib-esm/index.js.map +1 -1
- package/lib-esm/signals/signalsToRanges.js.map +1 -1
- package/lib-esm/signals/simulation/simulateXYPeaks.js.map +1 -1
- package/lib-esm/signals/utils/jAnalyzer.js.map +1 -1
- package/lib-esm/types/ContourOptions.js +2 -0
- package/lib-esm/types/ContourOptions.js.map +1 -0
- package/lib-esm/types/Data1D.js +2 -0
- package/lib-esm/types/Data1D.js.map +1 -0
- package/{lib/xyz → lib-esm/types}/Data2D.js.map +1 -1
- package/lib-esm/types/Display.js +2 -0
- package/lib-esm/types/Display.js.map +1 -0
- package/lib-esm/types/Display1D.js +2 -0
- package/lib-esm/types/Display1D.js.map +1 -0
- package/lib-esm/types/Display2D.js +2 -0
- package/lib-esm/types/Display2D.js.map +1 -0
- package/lib-esm/types/Filter.js +2 -0
- package/lib-esm/types/Filter.js.map +1 -0
- package/lib-esm/types/Info/Info.js +2 -0
- package/lib-esm/types/Info/Info.js.map +1 -0
- package/lib-esm/types/Info/Info1D.js +2 -0
- package/lib-esm/types/Info/Info1D.js.map +1 -0
- package/lib-esm/types/Info/Info2D.js +2 -0
- package/lib-esm/types/Info/Info2D.js.map +1 -0
- package/lib-esm/types/Integral.js +2 -0
- package/lib-esm/types/Integral.js.map +1 -0
- package/lib-esm/types/Integrals.js +2 -0
- package/lib-esm/types/Integrals.js.map +1 -0
- package/lib-esm/types/Jcoupling.js +2 -0
- package/lib-esm/types/Jcoupling.js.map +1 -0
- package/lib-esm/types/ObjectXY.js +2 -0
- package/lib-esm/types/ObjectXY.js.map +1 -0
- package/lib-esm/types/Options/DataSelectionOption.js +2 -0
- package/lib-esm/types/Options/DataSelectionOption.js.map +1 -0
- package/lib-esm/types/Options/JcampParsingOptions.js +2 -0
- package/lib-esm/types/Options/JcampParsingOptions.js.map +1 -0
- package/lib-esm/types/Options/NmredataParsingOptions.js +2 -0
- package/lib-esm/types/Options/NmredataParsingOptions.js.map +1 -0
- package/lib-esm/types/Options/ParsingOptions.js +2 -0
- package/lib-esm/types/Options/ParsingOptions.js.map +1 -0
- package/lib-esm/types/Options/SumOptions.js +2 -0
- package/lib-esm/types/Options/SumOptions.js.map +1 -0
- package/lib-esm/types/Peaks/BasePeak.js +2 -0
- package/lib-esm/types/Peaks/BasePeak.js.map +1 -0
- package/lib-esm/types/Peaks/Peak1D.js +2 -0
- package/lib-esm/types/Peaks/Peak1D.js.map +1 -0
- package/lib-esm/types/Peaks/Peak2D.js +2 -0
- package/lib-esm/types/Peaks/Peak2D.js.map +1 -0
- package/lib-esm/types/Peaks/Peaks.js +2 -0
- package/lib-esm/types/Peaks/Peaks.js.map +1 -0
- package/lib-esm/types/Ranges/Ranges.js +2 -0
- package/lib-esm/types/Ranges/Ranges.js.map +1 -0
- package/lib-esm/types/Signals/Signal.js +2 -0
- package/lib-esm/types/Signals/Signal.js.map +1 -0
- package/lib-esm/types/Signals/Signal1D.js +2 -0
- package/lib-esm/types/Signals/Signal1D.js.map +1 -0
- package/lib-esm/types/Signals/Signal2D.js +2 -0
- package/lib-esm/types/Signals/Signal2D.js.map +1 -0
- package/lib-esm/types/Spectrum/BaseSpectrum.js +2 -0
- package/lib-esm/types/Spectrum/BaseSpectrum.js.map +1 -0
- package/lib-esm/types/Spectrum/Spectrum.js +2 -0
- package/lib-esm/types/Spectrum/Spectrum.js.map +1 -0
- package/lib-esm/types/Spectrum/Spectrum1D.js +2 -0
- package/lib-esm/types/Spectrum/Spectrum1D.js.map +1 -0
- package/lib-esm/types/Spectrum/Spectrum2D.js +2 -0
- package/lib-esm/types/Spectrum/Spectrum2D.js.map +1 -0
- package/lib-esm/types/Zones/Zone.js +2 -0
- package/lib-esm/types/Zones/Zone.js.map +1 -0
- package/lib-esm/types/Zones/Zones.js +2 -0
- package/lib-esm/types/Zones/Zones.js.map +1 -0
- package/lib-esm/types/common/MapOptions.js +2 -0
- package/lib-esm/types/common/MapOptions.js.map +1 -0
- package/lib-esm/utilities/checkData2DFid.js +6 -0
- package/lib-esm/utilities/checkData2DFid.js.map +1 -0
- package/lib-esm/utilities/cloneData1D.js +5 -0
- package/lib-esm/utilities/cloneData1D.js.map +1 -0
- package/lib-esm/utilities/cloneData2D.js +24 -0
- package/lib-esm/utilities/cloneData2D.js.map +1 -0
- package/lib-esm/utilities/getSum.js +21 -0
- package/lib-esm/utilities/getSum.js.map +1 -0
- package/lib-esm/xyz/Entry2D.js +2 -0
- package/lib-esm/xyz/Entry2D.js.map +1 -0
- package/lib-esm/xyz/quadrature.js +50 -0
- package/lib-esm/xyz/quadrature.js.map +1 -0
- package/lib-esm/xyz/util/fft2d/digitalFilter.js +16 -0
- package/lib-esm/xyz/util/fft2d/digitalFilter.js.map +1 -0
- package/lib-esm/xyz/util/fft2d/fftDirectDimension.js +50 -0
- package/lib-esm/xyz/util/fft2d/fftDirectDimension.js.map +1 -0
- package/lib-esm/xyz/util/fft2d/fftIndirectDimension.js +65 -0
- package/lib-esm/xyz/util/fft2d/fftIndirectDimension.js.map +1 -0
- package/lib-esm/xyz/util/fft2d/removeDCOffset.js +15 -0
- package/lib-esm/xyz/util/fft2d/removeDCOffset.js.map +1 -0
- package/lib-esm/xyz/util/fft2d/zeroFilling.js +25 -0
- package/lib-esm/xyz/util/fft2d/zeroFilling.js.map +1 -0
- package/lib-esm/xyz/util/padData.js +7 -4
- package/lib-esm/xyz/util/padData.js.map +1 -1
- package/lib-esm/xyz/xyzAutoSignalsPicking.js.map +1 -1
- package/lib-esm/xyz/xyzAutoZonesPicking.js.map +1 -1
- package/lib-esm/xyz/xyzBidimensionalFFT.js +75 -0
- package/lib-esm/xyz/xyzBidimensionalFFT.js.map +1 -0
- package/lib-esm/xyz/xyzJResAnalyzer.js +35 -26
- package/lib-esm/xyz/xyzJResAnalyzer.js.map +1 -1
- package/package.json +10 -2
- package/src/apodization/apodization.ts +8 -4
- package/src/apodization/applyWindow.ts +0 -1
- package/src/apodization/compose.ts +1 -0
- package/src/apodization/getFunction.ts +3 -0
- package/src/apodization/shapes/WindowFunctions.ts +7 -1
- package/src/apodization/shapes/sineBell.ts +41 -0
- package/src/apodization/utils/getData.ts +0 -1
- package/src/constants/SignalsKinds.ts +37 -0
- package/src/datum/Entry1D.ts +11 -0
- package/src/datum/ExclusionZone.ts +5 -0
- package/src/datum/Filters.ts +44 -0
- package/src/datum/FiltersManager.ts +238 -0
- package/src/datum/MatrixFilter.ts +58 -0
- package/src/datum/MatrixOptions.ts +25 -0
- package/src/datum/data1d/filter1d/apodization.ts +90 -0
- package/src/datum/data1d/filter1d/baselineCorrection.ts +83 -0
- package/src/datum/data1d/filter1d/digitalFilter.ts +54 -0
- package/src/datum/data1d/filter1d/equallySpaced.ts +61 -0
- package/src/datum/data1d/filter1d/exclusionZones.ts +34 -0
- package/src/datum/data1d/filter1d/fft.ts +138 -0
- package/src/datum/data1d/filter1d/phaseCorrection.ts +127 -0
- package/src/datum/data1d/filter1d/shiftX.ts +31 -0
- package/src/datum/data1d/filter1d/signalProcessing.ts +79 -0
- package/src/datum/data1d/filter1d/utils/padDataToNextPowerOfTwo.ts +49 -0
- package/src/datum/data1d/filter1d/zeroFilling.ts +90 -0
- package/src/datum/data1d/updateRelatives.ts +50 -0
- package/src/datum/data1d/utils/RangeUtilities.ts +102 -0
- package/src/datum/data1d/utils/checkIntegralKind.ts +11 -0
- package/src/datum/data1d/utils/checkRangeKind.ts +8 -0
- package/src/datum/data1d/utils/getShiftX.ts +10 -0
- package/src/datum/data1d/utils/getSpectrumErrorValue.ts +6 -0
- package/src/datum/data1d/utils/mapIntegrals.ts +52 -0
- package/src/datum/data1d/utils/mapPeaks.ts +62 -0
- package/src/datum/data1d/utils/mapRanges.ts +107 -0
- package/src/datum/data1d/utils/updateIntegrals.ts +13 -0
- package/src/datum/data1d/utils/updateIntegralsRelativeValues.ts +17 -0
- package/src/datum/data1d/utils/updatePeaks.ts +10 -0
- package/src/datum/data1d/utils/updateRanges.ts +12 -0
- package/src/datum/data1d/utils/updateRangesRelativeValues.ts +16 -0
- package/src/datum/data2d/filter2d/shiftX.ts +37 -0
- package/src/datum/data2d/filter2d/shiftY.ts +36 -0
- package/src/datum/data2d/utils/get2DSpectrumErrorValue.ts +18 -0
- package/src/datum/data2d/utils/getShift.ts +23 -0
- package/src/datum/data2d/utils/isZoneExists.ts +27 -0
- package/src/datum/data2d/utils/mapZones.ts +80 -0
- package/src/datum/data2d/utils/updateZones.ts +10 -0
- package/src/index.ts +38 -0
- package/src/signals/signalsToRanges.ts +1 -1
- package/src/signals/simulation/simulateXYPeaks.ts +1 -1
- package/src/signals/utils/jAnalyzer.ts +20 -10
- package/src/types/ContourOptions.ts +10 -0
- package/src/types/Data1D.ts +5 -0
- package/src/types/Data2D.ts +7 -0
- package/src/types/Display.ts +3 -0
- package/src/types/Display1D.ts +8 -0
- package/src/types/Display2D.ts +12 -0
- package/src/types/Filter.ts +12 -0
- package/src/types/Info/Info.ts +15 -0
- package/src/types/Info/Info1D.ts +14 -0
- package/src/types/Info/Info2D.ts +11 -0
- package/src/types/Integral.ts +10 -0
- package/src/types/Integrals.ts +7 -0
- package/src/types/Jcoupling.ts +5 -0
- package/src/types/ObjectXY.ts +4 -0
- package/src/types/Options/DataSelectionOption.ts +6 -0
- package/src/types/Options/JcampParsingOptions.ts +35 -0
- package/src/types/Options/NmredataParsingOptions.ts +20 -0
- package/src/types/Options/ParsingOptions.ts +80 -0
- package/src/types/Options/SumOptions.ts +24 -0
- package/src/types/Peaks/BasePeak.ts +3 -0
- package/src/types/Peaks/Peak1D.ts +7 -0
- package/src/types/Peaks/Peak2D.ts +11 -0
- package/src/types/Peaks/Peaks.ts +6 -0
- package/src/types/Ranges/Ranges.ts +19 -0
- package/src/types/Signals/Signal.ts +4 -0
- package/src/types/Signals/Signal1D.ts +8 -0
- package/src/types/Signals/Signal2D.ts +21 -0
- package/src/types/Spectrum/BaseSpectrum.ts +8 -0
- package/src/types/Spectrum/Spectrum.ts +4 -0
- package/src/types/Spectrum/Spectrum1D.ts +23 -0
- package/src/types/Spectrum/Spectrum2D.ts +19 -0
- package/src/types/Zones/Zone.ts +15 -0
- package/src/types/Zones/Zones.ts +6 -0
- package/src/types/common/MapOptions.ts +6 -0
- package/src/utilities/checkData2DFid.ts +10 -0
- package/src/utilities/cloneData1D.ts +6 -0
- package/src/utilities/cloneData2D.ts +27 -0
- package/src/utilities/getSum.ts +24 -0
- package/src/xyz/Entry2D.ts +12 -0
- package/src/xyz/quadrature.ts +68 -0
- package/src/xyz/util/fft2d/digitalFilter.ts +24 -0
- package/src/xyz/util/fft2d/fftDirectDimension.ts +111 -0
- package/src/xyz/util/fft2d/fftIndirectDimension.ts +123 -0
- package/src/xyz/util/fft2d/removeDCOffset.ts +19 -0
- package/src/xyz/util/fft2d/zeroFilling.ts +39 -0
- package/src/xyz/util/padData.ts +13 -7
- package/src/xyz/xyzAutoSignalsPicking.ts +2 -2
- package/src/xyz/xyzAutoZonesPicking.ts +3 -9
- package/src/xyz/xyzBidimensionalFFT.ts +122 -0
- package/src/xyz/xyzJResAnalyzer.ts +51 -42
- package/lib/xyz/Data2D.d.ts +0 -7
- package/src/xyz/Data2D.ts +0 -7
- /package/lib/{xyz → types}/Data2D.js +0 -0
- /package/lib-esm/{xyz → types}/Data2D.js +0 -0
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import { xAdd, xMultiply, xSubtract } from 'ml-spectra-processing';
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export function quadrature(data, options) {
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checkData2DFid(data);
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const { fnMode } = options;
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switch (fnMode) {
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return ttpiQuadrature(data);
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case 'states':
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return shrQuadrature(data);
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case 'echo':
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return echoQuadrature(data);
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default:
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return {
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re: data.re.z,
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im: data.im.z,
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};
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}
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}
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function echoQuadrature(data) {
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const { re: { z: reMatrix }, im: { z: imMatrix }, } = data;
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const newRe = [];
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const newIm = [];
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for (let i = 0; i < reMatrix.length; i += 2) {
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let reCosine = reMatrix[i];
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let imCosine = imMatrix[i];
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let reSine = reMatrix[i + 1];
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let imSine = imMatrix[i + 1];
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newRe.push(xSubtract(xMultiply(imSine, -1), imCosine));
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newRe.push(xSubtract(reSine, reCosine));
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newIm.push(xAdd(reSine, reCosine));
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newIm.push(xSubtract(imSine, imCosine));
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}
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return { re: newRe, im: newIm };
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}
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function shrQuadrature(data) {
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const { re, im } = data;
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return { re: re.z, im: im.z };
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}
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function ttpiQuadrature(data) {
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const newRe = [];
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const newIm = [];
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const { re: { z: reMatrix }, im: { z: imMatrix }, } = data;
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for (let i = 0; i < reMatrix.length; i++) {
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newRe.push(i % 2 ? reMatrix[i].slice() : xMultiply(reMatrix[i], -1));
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newIm.push(i % 2 ? imMatrix[i].slice() : xMultiply(imMatrix[i], -1));
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}
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return { re: newRe, im: newIm };
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}
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//# sourceMappingURL=quadrature.js.map
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|
+
{"version":3,"file":"quadrature.js","sourceRoot":"","sources":["../../src/xyz/quadrature.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,IAAI,EAAE,SAAS,EAAE,SAAS,EAAE,MAAM,uBAAuB,CAAC;AAEnE,OAAO,EAAE,cAAc,EAAqB,MAAM,6BAA6B,CAAC;AAEhF,MAAM,UAAU,UAAU,CAAC,IAAY,EAAE,OAA2B;IAClE,cAAc,CAAC,IAAI,CAAC,CAAC;IAErB,MAAM,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC;IAE3B,QAAQ,MAAM,EAAE;QACd,KAAK,MAAM;YACT,OAAO,cAAc,CAAC,IAAI,CAAC,CAAC;QAC9B,KAAK,QAAQ;YACX,OAAO,aAAa,CAAC,IAAI,CAAC,CAAC;QAC7B,KAAK,MAAM;YACT,OAAO,cAAc,CAAC,IAAI,CAAC,CAAC;QAC9B;YACE,OAAO;gBACL,EAAE,EAAE,IAAI,CAAC,EAAE,CAAC,CAAC;gBACb,EAAE,EAAE,IAAI,CAAC,EAAE,CAAC,CAAC;aACd,CAAC;KACL;AACH,CAAC;AAED,SAAS,cAAc,CAAC,IAAuB;IAC7C,MAAM,EACJ,EAAE,EAAE,EAAE,CAAC,EAAE,QAAQ,EAAE,EACnB,EAAE,EAAE,EAAE,CAAC,EAAE,QAAQ,EAAE,GACpB,GAAG,IAAI,CAAC;IAET,MAAM,KAAK,GAAkB,EAAE,CAAC;IAChC,MAAM,KAAK,GAAkB,EAAE,CAAC;IAChC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,QAAQ,CAAC,MAAM,EAAE,CAAC,IAAI,CAAC,EAAE;QAC3C,IAAI,QAAQ,GAAG,QAAQ,CAAC,CAAC,CAAC,CAAC;QAC3B,IAAI,QAAQ,GAAG,QAAQ,CAAC,CAAC,CAAC,CAAC;QAC3B,IAAI,MAAM,GAAG,QAAQ,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC;QAC7B,IAAI,MAAM,GAAG,QAAQ,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC;QAE7B,KAAK,CAAC,IAAI,CAAC,SAAS,CAAC,SAAS,CAAC,MAAM,EAAE,CAAC,CAAC,CAAC,EAAE,QAAQ,CAAC,CAAC,CAAC;QACvD,KAAK,CAAC,IAAI,CAAC,SAAS,CAAC,MAAM,EAAE,QAAQ,CAAC,CAAC,CAAC;QACxC,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,MAAM,EAAE,QAAQ,CAAC,CAAC,CAAC;QACnC,KAAK,CAAC,IAAI,CAAC,SAAS,CAAC,MAAM,EAAE,QAAQ,CAAC,CAAC,CAAC;KACzC;IAED,OAAO,EAAE,EAAE,EAAE,KAAK,EAAE,EAAE,EAAE,KAAK,EAAE,CAAC;AAClC,CAAC;AAED,SAAS,aAAa,CAAC,IAAuB;IAC5C,MAAM,EAAE,EAAE,EAAE,EAAE,EAAE,GAAG,IAAI,CAAC;IACxB,OAAO,EAAE,EAAE,EAAE,EAAE,CAAC,CAAC,EAAE,EAAE,EAAE,EAAE,CAAC,CAAC,EAAE,CAAC;AAChC,CAAC;AAED,SAAS,cAAc,CAAC,IAAuB;IAC7C,MAAM,KAAK,GAAkB,EAAE,CAAC;IAChC,MAAM,KAAK,GAAkB,EAAE,CAAC;IAEhC,MAAM,EACJ,EAAE,EAAE,EAAE,CAAC,EAAE,QAAQ,EAAE,EACnB,EAAE,EAAE,EAAE,CAAC,EAAE,QAAQ,EAAE,GACpB,GAAG,IAAI,CAAC;IACT,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,QAAQ,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;QACxC,KAAK,CAAC,IAAI,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,KAAK,EAAE,CAAC,CAAC,CAAC,SAAS,CAAC,QAAQ,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC;QACrE,KAAK,CAAC,IAAI,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,KAAK,EAAE,CAAC,CAAC,CAAC,SAAS,CAAC,QAAQ,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC;KACtE;IAED,OAAO,EAAE,EAAE,EAAE,KAAK,EAAE,EAAE,EAAE,KAAK,EAAE,CAAC;AAClC,CAAC"}
|
|
@@ -0,0 +1,16 @@
|
|
|
1
|
+
export function digitalFilter(data, options) {
|
|
2
|
+
let { digitalFilterValue = 0 } = options;
|
|
3
|
+
let re = new Float64Array(data.re);
|
|
4
|
+
let im = new Float64Array(data.im);
|
|
5
|
+
let pointsToShift = Math.floor(digitalFilterValue);
|
|
6
|
+
const skip = 0;
|
|
7
|
+
pointsToShift += 0;
|
|
8
|
+
const newRe = new Float64Array(re.length);
|
|
9
|
+
const newIm = new Float64Array(im.length);
|
|
10
|
+
newRe.set(re.slice(pointsToShift));
|
|
11
|
+
newRe.set(re.slice(skip, pointsToShift), re.length - pointsToShift);
|
|
12
|
+
newIm.set(im.slice(pointsToShift));
|
|
13
|
+
newIm.set(im.slice(skip, pointsToShift), im.length - pointsToShift);
|
|
14
|
+
return { re: newRe, im: newIm };
|
|
15
|
+
}
|
|
16
|
+
//# sourceMappingURL=digitalFilter.js.map
|
|
@@ -0,0 +1 @@
|
|
|
1
|
+
{"version":3,"file":"digitalFilter.js","sourceRoot":"","sources":["../../../../src/xyz/util/fft2d/digitalFilter.ts"],"names":[],"mappings":"AAEA,MAAM,UAAU,aAAa,CAC3B,IAAc,EACd,OAAuC;IAEvC,IAAI,EAAE,kBAAkB,GAAG,CAAC,EAAE,GAAG,OAAO,CAAC;IACzC,IAAI,EAAE,GAAG,IAAI,YAAY,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IACnC,IAAI,EAAE,GAAG,IAAI,YAAY,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAEnC,IAAI,aAAa,GAAG,IAAI,CAAC,KAAK,CAAC,kBAAkB,CAAC,CAAC;IAEnD,MAAM,IAAI,GAAG,CAAC,CAAC;IACf,aAAa,IAAI,CAAC,CAAC;IAEnB,MAAM,KAAK,GAAG,IAAI,YAAY,CAAC,EAAE,CAAC,MAAM,CAAC,CAAC;IAC1C,MAAM,KAAK,GAAG,IAAI,YAAY,CAAC,EAAE,CAAC,MAAM,CAAC,CAAC;IAC1C,KAAK,CAAC,GAAG,CAAC,EAAE,CAAC,KAAK,CAAC,aAAa,CAAC,CAAC,CAAC;IACnC,KAAK,CAAC,GAAG,CAAC,EAAE,CAAC,KAAK,CAAC,IAAI,EAAE,aAAa,CAAC,EAAE,EAAE,CAAC,MAAM,GAAG,aAAa,CAAC,CAAC;IACpE,KAAK,CAAC,GAAG,CAAC,EAAE,CAAC,KAAK,CAAC,aAAa,CAAC,CAAC,CAAC;IACnC,KAAK,CAAC,GAAG,CAAC,EAAE,CAAC,KAAK,CAAC,IAAI,EAAE,aAAa,CAAC,EAAE,EAAE,CAAC,MAAM,GAAG,aAAa,CAAC,CAAC;IAEpE,OAAO,EAAE,EAAE,EAAE,KAAK,EAAE,EAAE,EAAE,KAAK,EAAE,CAAC;AAClC,CAAC"}
|
|
@@ -0,0 +1,50 @@
|
|
|
1
|
+
import Matrix from 'ml-matrix';
|
|
2
|
+
import { reimAutoPhaseCorrection, reimFFT, reimPhaseCorrection, } from 'ml-spectra-processing';
|
|
3
|
+
import { apodization, } from '../../../apodization/apodization';
|
|
4
|
+
import { digitalFilter } from './digitalFilter';
|
|
5
|
+
import { removeDCOffset } from './removeDCOffset';
|
|
6
|
+
import { zeroFilling } from './zeroFilling';
|
|
7
|
+
export function fftDirectDimension(data, options) {
|
|
8
|
+
const { re: reData, im: imData } = data;
|
|
9
|
+
const nbRows = reData.length;
|
|
10
|
+
const nbColumns = reData[0].length;
|
|
11
|
+
const { zeroFilling: zeroFillingF2, digitalFilterValue = 0 } = options;
|
|
12
|
+
const { factor: f2Factor = 2 } = zeroFillingF2 || {};
|
|
13
|
+
const nbPointsF2 = (zeroFillingF2 === null || zeroFillingF2 === void 0 ? void 0 : zeroFillingF2.nbPoints) || 2 ** Math.round(Math.log2(nbColumns * f2Factor));
|
|
14
|
+
const reFFT = new Matrix(nbRows, nbPointsF2);
|
|
15
|
+
const imFFT = new Matrix(nbRows, nbPointsF2);
|
|
16
|
+
const { apodization: apodizationF2 } = options;
|
|
17
|
+
let { ph0: ph0F2, ph1: ph1F2, mode: pcModeF2 = 'no', } = (options === null || options === void 0 ? void 0 : options.phaseCorrection) || {};
|
|
18
|
+
for (let i = 0; i < nbRows; i++) {
|
|
19
|
+
const newData = digitalFilter({ re: reData[i], im: imData[i] }, { digitalFilterValue });
|
|
20
|
+
Object.assign(newData, removeDCOffset(newData, { digitalFilterValue }));
|
|
21
|
+
if (apodizationF2) {
|
|
22
|
+
const { re: aRe, im: aIm } = apodization(newData, apodizationF2);
|
|
23
|
+
Object.assign(newData, { re: aRe, im: aIm });
|
|
24
|
+
}
|
|
25
|
+
Object.assign(newData, zeroFilling(newData, { digitalFilterValue, nbPoints: nbPointsF2 }));
|
|
26
|
+
Object.assign(newData, reimFFT(newData, { applyZeroShift: true }));
|
|
27
|
+
const dfResidual = (digitalFilterValue - Math.round(digitalFilterValue)) * Math.PI * 2;
|
|
28
|
+
if (dfResidual > 0) {
|
|
29
|
+
Object.assign(newData, reimPhaseCorrection(newData, 0, -dfResidual));
|
|
30
|
+
}
|
|
31
|
+
if (i === 0 &&
|
|
32
|
+
pcModeF2 === 'pk' &&
|
|
33
|
+
ph0F2 === undefined &&
|
|
34
|
+
ph1F2 === undefined) {
|
|
35
|
+
const phased = reimAutoPhaseCorrection(newData, { magnitudeMode: false });
|
|
36
|
+
ph0F2 = phased.ph0;
|
|
37
|
+
ph1F2 = phased.ph1;
|
|
38
|
+
}
|
|
39
|
+
if (pcModeF2 === 'pk' && ph0F2 !== undefined && ph1F2 !== undefined) {
|
|
40
|
+
Object.assign(newData, reimPhaseCorrection(newData, (ph0F2 * Math.PI) / 180, (ph1F2 * Math.PI) / 180));
|
|
41
|
+
}
|
|
42
|
+
reFFT.setRow(i, newData.re);
|
|
43
|
+
imFFT.setRow(i, newData.im);
|
|
44
|
+
}
|
|
45
|
+
return {
|
|
46
|
+
re: reFFT,
|
|
47
|
+
im: imFFT,
|
|
48
|
+
};
|
|
49
|
+
}
|
|
50
|
+
//# sourceMappingURL=fftDirectDimension.js.map
|
|
@@ -0,0 +1 @@
|
|
|
1
|
+
{"version":3,"file":"fftDirectDimension.js","sourceRoot":"","sources":["../../../../src/xyz/util/fft2d/fftDirectDimension.ts"],"names":[],"mappings":"AACA,OAAO,MAAM,MAAM,WAAW,CAAC;AAC/B,OAAO,EACL,uBAAuB,EACvB,OAAO,EACP,mBAAmB,GACpB,MAAM,uBAAuB,CAAC;AAE/B,OAAO,EACL,WAAW,GAEZ,MAAM,kCAAkC,CAAC;AAE1C,OAAO,EAAE,aAAa,EAAE,MAAM,iBAAiB,CAAC;AAChD,OAAO,EAAE,cAAc,EAAE,MAAM,kBAAkB,CAAC;AAClD,OAAO,EAAE,WAAW,EAAsB,MAAM,eAAe,CAAC;AAgBhE,MAAM,UAAU,kBAAkB,CAChC,IAA8C,EAC9C,OAA+B;IAE/B,MAAM,EAAE,EAAE,EAAE,MAAM,EAAE,EAAE,EAAE,MAAM,EAAE,GAAG,IAAI,CAAC;IACxC,MAAM,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC;IAC7B,MAAM,SAAS,GAAG,MAAM,CAAC,CAAC,CAAC,CAAC,MAAM,CAAC;IAEnC,MAAM,EAAE,WAAW,EAAE,aAAa,EAAE,kBAAkB,GAAG,CAAC,EAAE,GAAG,OAAO,CAAC;IAEvE,MAAM,EAAE,MAAM,EAAE,QAAQ,GAAG,CAAC,EAAE,GAAG,aAAa,IAAI,EAAE,CAAC;IACrD,MAAM,UAAU,GACd,CAAA,aAAa,aAAb,aAAa,uBAAb,aAAa,CAAE,QAAQ,KAAI,CAAC,IAAI,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,SAAS,GAAG,QAAQ,CAAC,CAAC,CAAC;IAE9E,MAAM,KAAK,GAAG,IAAI,MAAM,CAAC,MAAM,EAAE,UAAU,CAAC,CAAC;IAC7C,MAAM,KAAK,GAAG,IAAI,MAAM,CAAC,MAAM,EAAE,UAAU,CAAC,CAAC;IAE7C,MAAM,EAAE,WAAW,EAAE,aAAa,EAAE,GAAG,OAAO,CAAC;IAC/C,IAAI,EACF,GAAG,EAAE,KAAK,EACV,GAAG,EAAE,KAAK,EACV,IAAI,EAAE,QAAQ,GAAG,IAAI,GACtB,GAAG,CAAA,OAAO,aAAP,OAAO,uBAAP,OAAO,CAAE,eAAe,KAAI,EAAE,CAAC;IAEnC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,MAAM,EAAE,CAAC,EAAE,EAAE;QAC/B,MAAM,OAAO,GAAG,aAAa,CAC3B,EAAE,EAAE,EAAE,MAAM,CAAC,CAAC,CAAC,EAAE,EAAE,EAAE,MAAM,CAAC,CAAC,CAAC,EAAE,EAChC,EAAE,kBAAkB,EAAE,CACvB,CAAC;QAEF,MAAM,CAAC,MAAM,CAAC,OAAO,EAAE,cAAc,CAAC,OAAO,EAAE,EAAE,kBAAkB,EAAE,CAAC,CAAC,CAAC;QAExE,IAAI,aAAa,EAAE;YACjB,MAAM,EAAE,EAAE,EAAE,GAAG,EAAE,EAAE,EAAE,GAAG,EAAE,GAAG,WAAW,CAAC,OAAO,EAAE,aAAa,CAAC,CAAC;YACjE,MAAM,CAAC,MAAM,CAAC,OAAO,EAAE,EAAE,EAAE,EAAE,GAAG,EAAE,EAAE,EAAE,GAAG,EAAE,CAAC,CAAC;SAC9C;QAED,MAAM,CAAC,MAAM,CACX,OAAO,EACP,WAAW,CAAC,OAAO,EAAE,EAAE,kBAAkB,EAAE,QAAQ,EAAE,UAAU,EAAE,CAAC,CACnE,CAAC;QAEF,MAAM,CAAC,MAAM,CAAC,OAAO,EAAE,OAAO,CAAC,OAAO,EAAE,EAAE,cAAc,EAAE,IAAI,EAAE,CAAC,CAAC,CAAC;QAEnE,MAAM,UAAU,GACd,CAAC,kBAAkB,GAAG,IAAI,CAAC,KAAK,CAAC,kBAAkB,CAAC,CAAC,GAAG,IAAI,CAAC,EAAE,GAAG,CAAC,CAAC;QACtE,IAAI,UAAU,GAAG,CAAC,EAAE;YAClB,MAAM,CAAC,MAAM,CAAC,OAAO,EAAE,mBAAmB,CAAC,OAAO,EAAE,CAAC,EAAE,CAAC,UAAU,CAAC,CAAC,CAAC;SACtE;QAED,IACE,CAAC,KAAK,CAAC;YACP,QAAQ,KAAK,IAAI;YACjB,KAAK,KAAK,SAAS;YACnB,KAAK,KAAK,SAAS,EACnB;YACA,MAAM,MAAM,GAAG,uBAAuB,CAAC,OAAO,EAAE,EAAE,aAAa,EAAE,KAAK,EAAE,CAAC,CAAC;YAC1E,KAAK,GAAG,MAAM,CAAC,GAAG,CAAC;YACnB,KAAK,GAAG,MAAM,CAAC,GAAG,CAAC;SACpB;QACD,IAAI,QAAQ,KAAK,IAAI,IAAI,KAAK,KAAK,SAAS,IAAI,KAAK,KAAK,SAAS,EAAE;YACnE,MAAM,CAAC,MAAM,CACX,OAAO,EACP,mBAAmB,CACjB,OAAO,EACP,CAAC,KAAK,GAAG,IAAI,CAAC,EAAE,CAAC,GAAG,GAAG,EACvB,CAAC,KAAK,GAAG,IAAI,CAAC,EAAE,CAAC,GAAG,GAAG,CACxB,CACF,CAAC;SACH;QAED,KAAK,CAAC,MAAM,CAAC,CAAC,EAAE,OAAO,CAAC,EAAE,CAAC,CAAC;QAC5B,KAAK,CAAC,MAAM,CAAC,CAAC,EAAE,OAAO,CAAC,EAAE,CAAC,CAAC;KAC7B;IAED,OAAO;QACL,EAAE,EAAE,KAAK;QACT,EAAE,EAAE,KAAK;KACV,CAAC;AACJ,CAAC"}
|
|
@@ -0,0 +1,65 @@
|
|
|
1
|
+
import Matrix from 'ml-matrix';
|
|
2
|
+
import { reimAbsolute, reimAutoPhaseCorrection, reimFFT, reimPhaseCorrection, } from 'ml-spectra-processing';
|
|
3
|
+
import { apodization, } from '../../../apodization/apodization';
|
|
4
|
+
import { zeroFilling } from './zeroFilling';
|
|
5
|
+
export function fftIndirectDimension(data, options) {
|
|
6
|
+
var _a;
|
|
7
|
+
const reData = Matrix.checkMatrix(data.re);
|
|
8
|
+
const imData = Matrix.checkMatrix(data.im);
|
|
9
|
+
const nbRows = reData.rows;
|
|
10
|
+
const nbColumns = reData.columns;
|
|
11
|
+
const { zeroFilling: zeroFillingF1 } = options;
|
|
12
|
+
const { factor: f1Factor = 2 } = zeroFillingF1 || {};
|
|
13
|
+
const nbPointsF1 = (zeroFillingF1 === null || zeroFillingF1 === void 0 ? void 0 : zeroFillingF1.nbPoints) || 2 ** Math.round(Math.log2(nbRows * f1Factor));
|
|
14
|
+
const { apodization: apodizationF1 } = options;
|
|
15
|
+
let { ph0: ph0F1, ph1: ph1F1, mode: pcModeF1, } = options.phaseCorrection || {};
|
|
16
|
+
const reResult = new Matrix(nbPointsF1, nbColumns);
|
|
17
|
+
const imResult = new Matrix(nbPointsF1, nbColumns);
|
|
18
|
+
for (let i = 0; i < nbColumns; i++) {
|
|
19
|
+
const { re: aRe, im: aIm } = apodization({
|
|
20
|
+
re: reData.getColumn(i),
|
|
21
|
+
im: imData.getColumn(i),
|
|
22
|
+
}, apodizationF1);
|
|
23
|
+
const newRe = [];
|
|
24
|
+
const newIm = [];
|
|
25
|
+
if (options.fnMode === 'echo') {
|
|
26
|
+
for (let j = 0; j < aRe.length; j += 2) {
|
|
27
|
+
newRe.push(aRe[j]);
|
|
28
|
+
newIm.push(aRe[j + 1]);
|
|
29
|
+
}
|
|
30
|
+
}
|
|
31
|
+
else {
|
|
32
|
+
for (let j = 0; j < aRe.length; j++) {
|
|
33
|
+
newRe.push(aRe[j]);
|
|
34
|
+
newIm.push(-aIm[j]);
|
|
35
|
+
}
|
|
36
|
+
}
|
|
37
|
+
let transformed = reimFFT(zeroFilling({
|
|
38
|
+
re: newRe,
|
|
39
|
+
im: newIm,
|
|
40
|
+
}, { digitalFilterValue: 0, nbPoints: nbPointsF1 }), { applyZeroShift: true });
|
|
41
|
+
let { re, im } = transformed;
|
|
42
|
+
if (((_a = options.phaseCorrection) === null || _a === void 0 ? void 0 : _a.mode) === 'mc') {
|
|
43
|
+
re = reimAbsolute({ re, im });
|
|
44
|
+
im = new Float64Array(im.length);
|
|
45
|
+
}
|
|
46
|
+
if (pcModeF1 === 'pk') {
|
|
47
|
+
if (i === 0 && ph0F1 === undefined && ph1F1 === undefined) {
|
|
48
|
+
//here we can improve it by checking if the experiment is phase sensitive.
|
|
49
|
+
const phased = reimAutoPhaseCorrection({ re, im }, { magnitudeMode: false });
|
|
50
|
+
ph0F1 = phased.ph0;
|
|
51
|
+
ph1F1 = phased.ph1;
|
|
52
|
+
}
|
|
53
|
+
if (ph0F1 !== undefined && ph1F1 !== undefined) {
|
|
54
|
+
Object.assign(transformed, reimPhaseCorrection(transformed, (ph0F1 * Math.PI) / 180, (ph1F1 * Math.PI) / 180));
|
|
55
|
+
}
|
|
56
|
+
}
|
|
57
|
+
reResult.setColumn(i, re);
|
|
58
|
+
imResult.setColumn(i, im);
|
|
59
|
+
}
|
|
60
|
+
return {
|
|
61
|
+
re: reResult,
|
|
62
|
+
im: imResult,
|
|
63
|
+
};
|
|
64
|
+
}
|
|
65
|
+
//# sourceMappingURL=fftIndirectDimension.js.map
|
|
@@ -0,0 +1 @@
|
|
|
1
|
+
{"version":3,"file":"fftIndirectDimension.js","sourceRoot":"","sources":["../../../../src/xyz/util/fft2d/fftIndirectDimension.ts"],"names":[],"mappings":"AACA,OAAO,MAAM,MAAM,WAAW,CAAC;AAC/B,OAAO,EACL,YAAY,EACZ,uBAAuB,EACvB,OAAO,EACP,mBAAmB,GACpB,MAAM,uBAAuB,CAAC;AAE/B,OAAO,EACL,WAAW,GAEZ,MAAM,kCAAkC,CAAC;AAE1C,OAAO,EAAE,WAAW,EAAsB,MAAM,eAAe,CAAC;AAehE,MAAM,UAAU,oBAAoB,CAClC,IAAgE,EAChE,OAAiC;;IAEjC,MAAM,MAAM,GAAG,MAAM,CAAC,WAAW,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAC3C,MAAM,MAAM,GAAG,MAAM,CAAC,WAAW,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAE3C,MAAM,MAAM,GAAG,MAAM,CAAC,IAAI,CAAC;IAC3B,MAAM,SAAS,GAAG,MAAM,CAAC,OAAO,CAAC;IAEjC,MAAM,EAAE,WAAW,EAAE,aAAa,EAAE,GAAG,OAAO,CAAC;IAC/C,MAAM,EAAE,MAAM,EAAE,QAAQ,GAAG,CAAC,EAAE,GAAG,aAAa,IAAI,EAAE,CAAC;IACrD,MAAM,UAAU,GACd,CAAA,aAAa,aAAb,aAAa,uBAAb,aAAa,CAAE,QAAQ,KAAI,CAAC,IAAI,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,MAAM,GAAG,QAAQ,CAAC,CAAC,CAAC;IAC3E,MAAM,EAAE,WAAW,EAAE,aAAa,EAAE,GAAG,OAAO,CAAC;IAC/C,IAAI,EACF,GAAG,EAAE,KAAK,EACV,GAAG,EAAE,KAAK,EACV,IAAI,EAAE,QAAQ,GACf,GAAG,OAAO,CAAC,eAAe,IAAI,EAAE,CAAC;IAElC,MAAM,QAAQ,GAAG,IAAI,MAAM,CAAC,UAAU,EAAE,SAAS,CAAC,CAAC;IACnD,MAAM,QAAQ,GAAG,IAAI,MAAM,CAAC,UAAU,EAAE,SAAS,CAAC,CAAC;IACnD,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,SAAS,EAAE,CAAC,EAAE,EAAE;QAClC,MAAM,EAAE,EAAE,EAAE,GAAG,EAAE,EAAE,EAAE,GAAG,EAAE,GAAG,WAAW,CACtC;YACE,EAAE,EAAE,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC;YACvB,EAAE,EAAE,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC;SACxB,EACD,aAAa,CACd,CAAC;QAEF,MAAM,KAAK,GAAG,EAAE,CAAC;QACjB,MAAM,KAAK,GAAG,EAAE,CAAC;QACjB,IAAI,OAAO,CAAC,MAAM,KAAK,MAAM,EAAE;YAC7B,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,GAAG,CAAC,MAAM,EAAE,CAAC,IAAI,CAAC,EAAE;gBACtC,KAAK,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC;gBACnB,KAAK,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC;aACxB;SACF;aAAM;YACL,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,GAAG,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;gBACnC,KAAK,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC;gBACnB,KAAK,CAAC,IAAI,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC;aACrB;SACF;QAED,IAAI,WAAW,GAAG,OAAO,CACvB,WAAW,CACT;YACE,EAAE,EAAE,KAAK;YACT,EAAE,EAAE,KAAK;SACV,EACD,EAAE,kBAAkB,EAAE,CAAC,EAAE,QAAQ,EAAE,UAAU,EAAE,CAChD,EACD,EAAE,cAAc,EAAE,IAAI,EAAE,CACzB,CAAC;QACF,IAAI,EAAE,EAAE,EAAE,EAAE,EAAE,GAAG,WAAW,CAAC;QAE7B,IAAI,CAAA,MAAA,OAAO,CAAC,eAAe,0CAAE,IAAI,MAAK,IAAI,EAAE;YAC1C,EAAE,GAAG,YAAY,CAAC,EAAE,EAAE,EAAE,EAAE,EAAE,CAAC,CAAC;YAC9B,EAAE,GAAG,IAAI,YAAY,CAAC,EAAE,CAAC,MAAM,CAAC,CAAC;SAClC;QAED,IAAI,QAAQ,KAAK,IAAI,EAAE;YACrB,IAAI,CAAC,KAAK,CAAC,IAAI,KAAK,KAAK,SAAS,IAAI,KAAK,KAAK,SAAS,EAAE;gBACzD,0EAA0E;gBAC1E,MAAM,MAAM,GAAG,uBAAuB,CACpC,EAAE,EAAE,EAAE,EAAE,EAAE,EACV,EAAE,aAAa,EAAE,KAAK,EAAE,CACzB,CAAC;gBACF,KAAK,GAAG,MAAM,CAAC,GAAG,CAAC;gBACnB,KAAK,GAAG,MAAM,CAAC,GAAG,CAAC;aACpB;YACD,IAAI,KAAK,KAAK,SAAS,IAAI,KAAK,KAAK,SAAS,EAAE;gBAC9C,MAAM,CAAC,MAAM,CACX,WAAW,EACX,mBAAmB,CACjB,WAAW,EACX,CAAC,KAAK,GAAG,IAAI,CAAC,EAAE,CAAC,GAAG,GAAG,EACvB,CAAC,KAAK,GAAG,IAAI,CAAC,EAAE,CAAC,GAAG,GAAG,CACxB,CACF,CAAC;aACH;SACF;QAED,QAAQ,CAAC,SAAS,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC;QAC1B,QAAQ,CAAC,SAAS,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC;KAC3B;IAED,OAAO;QACL,EAAE,EAAE,QAAQ;QACZ,EAAE,EAAE,QAAQ;KACb,CAAC;AACJ,CAAC"}
|
|
@@ -0,0 +1,15 @@
|
|
|
1
|
+
import { xMean } from 'ml-spectra-processing';
|
|
2
|
+
export function removeDCOffset(data, options) {
|
|
3
|
+
let { digitalFilterValue = 0 } = options;
|
|
4
|
+
const nbPoints = data.re.length;
|
|
5
|
+
const newRe = new Float64Array(data.re);
|
|
6
|
+
const newIm = new Float64Array(data.im);
|
|
7
|
+
const averageRe = xMean(data.re.slice((nbPoints * 0.75) >> 0, nbPoints - digitalFilterValue));
|
|
8
|
+
const averageIm = xMean(data.im.slice((nbPoints * 0.75) >> 0, nbPoints - digitalFilterValue));
|
|
9
|
+
for (let i = digitalFilterValue; i < nbPoints - digitalFilterValue; i++) {
|
|
10
|
+
newRe[i] -= averageRe;
|
|
11
|
+
newIm[i] -= averageIm;
|
|
12
|
+
}
|
|
13
|
+
return { re: newRe, im: newIm };
|
|
14
|
+
}
|
|
15
|
+
//# sourceMappingURL=removeDCOffset.js.map
|
|
@@ -0,0 +1 @@
|
|
|
1
|
+
{"version":3,"file":"removeDCOffset.js","sourceRoot":"","sources":["../../../../src/xyz/util/fft2d/removeDCOffset.ts"],"names":[],"mappings":"AAAA,OAAO,EAAY,KAAK,EAAE,MAAM,uBAAuB,CAAC;AAExD,MAAM,UAAU,cAAc,CAAC,IAAc,EAAE,OAAY;IACzD,IAAI,EAAE,kBAAkB,GAAG,CAAC,EAAE,GAAG,OAAO,CAAC;IACzC,MAAM,QAAQ,GAAG,IAAI,CAAC,EAAE,CAAC,MAAM,CAAC;IAChC,MAAM,KAAK,GAAG,IAAI,YAAY,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IACxC,MAAM,KAAK,GAAG,IAAI,YAAY,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IACxC,MAAM,SAAS,GAAG,KAAK,CACrB,IAAI,CAAC,EAAE,CAAC,KAAK,CAAC,CAAC,QAAQ,GAAG,IAAI,CAAC,IAAI,CAAC,EAAE,QAAQ,GAAG,kBAAkB,CAAC,CACrE,CAAC;IACF,MAAM,SAAS,GAAG,KAAK,CACrB,IAAI,CAAC,EAAE,CAAC,KAAK,CAAC,CAAC,QAAQ,GAAG,IAAI,CAAC,IAAI,CAAC,EAAE,QAAQ,GAAG,kBAAkB,CAAC,CACrE,CAAC;IACF,KAAK,IAAI,CAAC,GAAG,kBAAkB,EAAE,CAAC,GAAG,QAAQ,GAAG,kBAAkB,EAAE,CAAC,EAAE,EAAE;QACvE,KAAK,CAAC,CAAC,CAAC,IAAI,SAAS,CAAC;QACtB,KAAK,CAAC,CAAC,CAAC,IAAI,SAAS,CAAC;KACvB;IACD,OAAO,EAAE,EAAE,EAAE,KAAK,EAAE,EAAE,EAAE,KAAK,EAAE,CAAC;AAClC,CAAC"}
|
|
@@ -0,0 +1,25 @@
|
|
|
1
|
+
export function zeroFilling(data, options) {
|
|
2
|
+
let { nbPoints, factor = 2, digitalFilterValue: grpdly = 0 } = options;
|
|
3
|
+
if (!nbPoints) {
|
|
4
|
+
nbPoints = 2 ** Math.round(Math.log2(data.re.length * factor));
|
|
5
|
+
}
|
|
6
|
+
let pointsToShift;
|
|
7
|
+
if (grpdly > 0) {
|
|
8
|
+
pointsToShift = Math.floor(grpdly);
|
|
9
|
+
}
|
|
10
|
+
else {
|
|
11
|
+
pointsToShift = 0;
|
|
12
|
+
}
|
|
13
|
+
const { re, im } = data;
|
|
14
|
+
let newRE = new Float64Array(nbPoints);
|
|
15
|
+
let newIM = new Float64Array(nbPoints);
|
|
16
|
+
const length = Math.min(nbPoints, re.length);
|
|
17
|
+
newRE.set(re.slice(0, length - pointsToShift));
|
|
18
|
+
newIM.set(im.slice(0, length - pointsToShift));
|
|
19
|
+
if (pointsToShift > 0 && pointsToShift < nbPoints) {
|
|
20
|
+
newRE.set(re.slice(re.length - pointsToShift), nbPoints - pointsToShift);
|
|
21
|
+
newIM.set(im.slice(re.length - pointsToShift), nbPoints - pointsToShift);
|
|
22
|
+
}
|
|
23
|
+
return { re: newRE, im: newIM };
|
|
24
|
+
}
|
|
25
|
+
//# sourceMappingURL=zeroFilling.js.map
|
|
@@ -0,0 +1 @@
|
|
|
1
|
+
{"version":3,"file":"zeroFilling.js","sourceRoot":"","sources":["../../../../src/xyz/util/fft2d/zeroFilling.ts"],"names":[],"mappings":"AAQA,MAAM,UAAU,WAAW,CAAC,IAAc,EAAE,OAA2B;IACrE,IAAI,EAAE,QAAQ,EAAE,MAAM,GAAG,CAAC,EAAE,kBAAkB,EAAE,MAAM,GAAG,CAAC,EAAE,GAAG,OAAO,CAAC;IAEvE,IAAI,CAAC,QAAQ,EAAE;QACb,QAAQ,GAAG,CAAC,IAAI,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC,MAAM,GAAG,MAAM,CAAC,CAAC,CAAC;KAChE;IAED,IAAI,aAAa,CAAC;IAClB,IAAI,MAAM,GAAG,CAAC,EAAE;QACd,aAAa,GAAG,IAAI,CAAC,KAAK,CAAC,MAAM,CAAC,CAAC;KACpC;SAAM;QACL,aAAa,GAAG,CAAC,CAAC;KACnB;IAED,MAAM,EAAE,EAAE,EAAE,EAAE,EAAE,GAAG,IAAI,CAAC;IAExB,IAAI,KAAK,GAAG,IAAI,YAAY,CAAC,QAAQ,CAAC,CAAC;IACvC,IAAI,KAAK,GAAG,IAAI,YAAY,CAAC,QAAQ,CAAC,CAAC;IAEvC,MAAM,MAAM,GAAG,IAAI,CAAC,GAAG,CAAC,QAAQ,EAAE,EAAE,CAAC,MAAM,CAAC,CAAC;IAE7C,KAAK,CAAC,GAAG,CAAC,EAAE,CAAC,KAAK,CAAC,CAAC,EAAE,MAAM,GAAG,aAAa,CAAC,CAAC,CAAC;IAC/C,KAAK,CAAC,GAAG,CAAC,EAAE,CAAC,KAAK,CAAC,CAAC,EAAE,MAAM,GAAG,aAAa,CAAC,CAAC,CAAC;IAE/C,IAAI,aAAa,GAAG,CAAC,IAAI,aAAa,GAAG,QAAQ,EAAE;QACjD,KAAK,CAAC,GAAG,CAAC,EAAE,CAAC,KAAK,CAAC,EAAE,CAAC,MAAM,GAAG,aAAa,CAAC,EAAE,QAAQ,GAAG,aAAa,CAAC,CAAC;QACzE,KAAK,CAAC,GAAG,CAAC,EAAE,CAAC,KAAK,CAAC,EAAE,CAAC,MAAM,GAAG,aAAa,CAAC,EAAE,QAAQ,GAAG,aAAa,CAAC,CAAC;KAC1E;IAED,OAAO,EAAE,EAAE,EAAE,KAAK,EAAE,EAAE,EAAE,KAAK,EAAE,CAAC;AAClC,CAAC"}
|
|
@@ -1,4 +1,3 @@
|
|
|
1
|
-
import Matrix from 'ml-matrix';
|
|
2
1
|
export function padData(spectraData, options) {
|
|
3
2
|
let { minX, maxX, minY, maxY } = spectraData;
|
|
4
3
|
const width = options.width;
|
|
@@ -14,14 +13,18 @@ export function padData(spectraData, options) {
|
|
|
14
13
|
yDiff++;
|
|
15
14
|
let xOffset = xDiff / 2;
|
|
16
15
|
let yOffset = yDiff / 2;
|
|
17
|
-
|
|
16
|
+
const newMatrix = [];
|
|
17
|
+
for (let i = 0; i < nbSubSpectra + yDiff; i++) {
|
|
18
|
+
newMatrix.push(new Float64Array(nbPoints + xDiff));
|
|
19
|
+
}
|
|
18
20
|
for (let i = 0; i < nbSubSpectra; i++) {
|
|
19
21
|
for (let j = 0; j < nbPoints; j++) {
|
|
20
|
-
newMatrix
|
|
22
|
+
newMatrix[i + yOffset].set(spectraData.z[i], xOffset);
|
|
21
23
|
}
|
|
22
24
|
}
|
|
23
25
|
return {
|
|
24
|
-
|
|
26
|
+
...spectraData,
|
|
27
|
+
z: newMatrix,
|
|
25
28
|
minX: minX - xOffset * xInterval,
|
|
26
29
|
maxX: maxX + xOffset * xInterval,
|
|
27
30
|
minY: minY - yOffset * yInterval,
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"padData.js","sourceRoot":"","sources":["../../../src/xyz/util/padData.ts"],"names":[],"mappings":"
|
|
1
|
+
{"version":3,"file":"padData.js","sourceRoot":"","sources":["../../../src/xyz/util/padData.ts"],"names":[],"mappings":"AAEA,MAAM,UAAU,OAAO,CACrB,WAA0B,EAC1B,OAA0B;IAE1B,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,GAAG,WAAW,CAAC;IAE7C,MAAM,KAAK,GAAG,OAAO,CAAC,KAAK,CAAC;IAE5B,IAAI,QAAQ,GAAG,WAAW,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,MAAM,CAAC;IACvC,IAAI,YAAY,GAAG,WAAW,CAAC,CAAC,CAAC,MAAM,CAAC;IAExC,IAAI,SAAS,GAAG,CAAC,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,YAAY,GAAG,CAAC,CAAC,CAAC;IACnD,IAAI,SAAS,GAAG,CAAC,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,QAAQ,GAAG,CAAC,CAAC,CAAC;IAE/C,IAAI,KAAK,GAAG,KAAK,GAAG,YAAY,CAAC;IACjC,IAAI,KAAK,GAAG,IAAI,CAAC,GAAG,CAAC,KAAK,GAAG,QAAQ,EAAE,CAAC,CAAC,CAAC;IAC1C,IAAI,KAAK,GAAG,CAAC;QAAE,KAAK,EAAE,CAAC;IACvB,IAAI,KAAK,GAAG,CAAC;QAAE,KAAK,EAAE,CAAC;IAEvB,IAAI,OAAO,GAAG,KAAK,GAAG,CAAC,CAAC;IACxB,IAAI,OAAO,GAAG,KAAK,GAAG,CAAC,CAAC;IAExB,MAAM,SAAS,GAAmB,EAAE,CAAC;IACrC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,YAAY,GAAG,KAAK,EAAE,CAAC,EAAE,EAAE;QAC7C,SAAS,CAAC,IAAI,CAAC,IAAI,YAAY,CAAC,QAAQ,GAAG,KAAK,CAAC,CAAC,CAAC;KACpD;IACD,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,YAAY,EAAE,CAAC,EAAE,EAAE;QACrC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,QAAQ,EAAE,CAAC,EAAE,EAAE;YACjC,SAAS,CAAC,CAAC,GAAG,OAAO,CAAC,CAAC,GAAG,CAAC,WAAW,CAAC,CAAC,CAAC,CAAC,CAAC,EAAE,OAAO,CAAC,CAAC;SACvD;KACF;IAED,OAAO;QACL,GAAG,WAAW;QACd,CAAC,EAAE,SAAS;QACZ,IAAI,EAAE,IAAI,GAAG,OAAO,GAAG,SAAS;QAChC,IAAI,EAAE,IAAI,GAAG,OAAO,GAAG,SAAS;QAChC,IAAI,EAAE,IAAI,GAAG,OAAO,GAAG,SAAS;QAChC,IAAI,EAAE,IAAI,GAAG,OAAO,GAAG,SAAS;KACjC,CAAC;AACJ,CAAC"}
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"xyzAutoSignalsPicking.js","sourceRoot":"","sources":["../../src/xyz/xyzAutoSignalsPicking.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,EAAE,IAAI,UAAU,EAAE,MAAM,cAAc,CAAC;
|
|
1
|
+
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|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"xyzAutoZonesPicking.js","sourceRoot":"","sources":["../../src/xyz/xyzAutoZonesPicking.ts"],"names":[],"mappings":"
|
|
1
|
+
{"version":3,"file":"xyzAutoZonesPicking.js","sourceRoot":"","sources":["../../src/xyz/xyzAutoZonesPicking.ts"],"names":[],"mappings":"AAEA,OAAO,EAAE,qBAAqB,EAAE,MAAM,IAAI,CAAC;AAK3C,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AA2DhD,MAAM,UAAU,mBAAmB,CACjC,WAA0B,EAC1B,OAAmC;IAEnC,MAAM,OAAO,GAAG,qBAAqB,CAAC,WAAW,EAAE,OAAO,CAAC,CAAC;IAC5D,OAAO,WAAW,CAAC,OAAO,CAAC,CAAC;AAC9B,CAAC"}
|
|
@@ -0,0 +1,75 @@
|
|
|
1
|
+
import { quadrature } from './quadrature';
|
|
2
|
+
import { fftDirectDimension, } from './util/fft2d/fftDirectDimension';
|
|
3
|
+
import { fftIndirectDimension, } from './util/fft2d/fftIndirectDimension';
|
|
4
|
+
export function xyzBidimensionalFFT(data, options) {
|
|
5
|
+
ensureData2DFid(data);
|
|
6
|
+
const { info, fnMode, digitalFilterValue = 0, zeroFilling: zeroFillingGeneral, } = options;
|
|
7
|
+
const orderedData = quadrature(data, { fnMode });
|
|
8
|
+
const { re: reData } = orderedData;
|
|
9
|
+
const nbRows = reData.length;
|
|
10
|
+
const nbColumns = reData[0].length;
|
|
11
|
+
const { direct = {}, indirect = {} } = options;
|
|
12
|
+
const { zeroFilling: zeroFillingF2 = zeroFillingGeneral } = direct;
|
|
13
|
+
const { factor: f2Factor = 2 } = zeroFillingF2 || {};
|
|
14
|
+
const nbPointsF2 = (zeroFillingF2 === null || zeroFillingF2 === void 0 ? void 0 : zeroFillingF2.nbPoints) || 2 ** Math.round(Math.log2(nbColumns * f2Factor));
|
|
15
|
+
const transformed = fftDirectDimension(orderedData, {
|
|
16
|
+
...direct,
|
|
17
|
+
fnMode,
|
|
18
|
+
digitalFilterValue,
|
|
19
|
+
zeroFilling: { nbPoints: nbPointsF2 },
|
|
20
|
+
});
|
|
21
|
+
const { zeroFilling: zeroFillingF1 } = options;
|
|
22
|
+
const { factor: f1Factor = 2 } = zeroFillingF1 || {};
|
|
23
|
+
const nbPointsF1 = (zeroFillingF1 === null || zeroFillingF1 === void 0 ? void 0 : zeroFillingF1.nbPoints) || 2 ** Math.round(Math.log2(nbRows * f1Factor));
|
|
24
|
+
const { re: reResult, im: imResult } = fftIndirectDimension(transformed, {
|
|
25
|
+
...indirect,
|
|
26
|
+
fnMode,
|
|
27
|
+
zeroFilling: { nbPoints: nbPointsF1 },
|
|
28
|
+
});
|
|
29
|
+
const minMaxXY = getMinMaxXY(info);
|
|
30
|
+
return {
|
|
31
|
+
re: {
|
|
32
|
+
z: convertToDoubleArray(reResult),
|
|
33
|
+
maxZ: reResult.max(),
|
|
34
|
+
minZ: reResult.min(),
|
|
35
|
+
...minMaxXY,
|
|
36
|
+
},
|
|
37
|
+
im: {
|
|
38
|
+
z: convertToDoubleArray(imResult),
|
|
39
|
+
maxZ: imResult.max(),
|
|
40
|
+
minZ: imResult.min(),
|
|
41
|
+
...minMaxXY,
|
|
42
|
+
},
|
|
43
|
+
};
|
|
44
|
+
}
|
|
45
|
+
function ensureData2DFid(data) {
|
|
46
|
+
if (!('re' in data)) {
|
|
47
|
+
throw new Error('bidimensional FFT only can be applied to raw data');
|
|
48
|
+
}
|
|
49
|
+
}
|
|
50
|
+
function convertToDoubleArray(data) {
|
|
51
|
+
const result = new Array(data.rows);
|
|
52
|
+
for (let i = 0; i < data.rows; i++) {
|
|
53
|
+
result[i] = new Float64Array(data.getRow(i));
|
|
54
|
+
}
|
|
55
|
+
return result;
|
|
56
|
+
}
|
|
57
|
+
function getMinMaxXY(info) {
|
|
58
|
+
const min = [];
|
|
59
|
+
const max = [];
|
|
60
|
+
for (let i = 0; i < info.baseFrequency.length; i++) {
|
|
61
|
+
const baseFrequency = Number.parseFloat(info.baseFrequency[i]);
|
|
62
|
+
const frequencyOffset = Number.parseFloat(info.frequencyOffset[i]);
|
|
63
|
+
const spectralWidth = Number.parseFloat(info.spectralWidth[i]);
|
|
64
|
+
const offset = frequencyOffset / baseFrequency;
|
|
65
|
+
min.push(offset - spectralWidth * 0.5);
|
|
66
|
+
max.push(offset + spectralWidth * 0.5);
|
|
67
|
+
}
|
|
68
|
+
return {
|
|
69
|
+
minX: min[0],
|
|
70
|
+
maxX: max[0],
|
|
71
|
+
minY: min[1],
|
|
72
|
+
maxY: max[1],
|
|
73
|
+
};
|
|
74
|
+
}
|
|
75
|
+
//# sourceMappingURL=xyzBidimensionalFFT.js.map
|
|
@@ -0,0 +1 @@
|
|
|
1
|
+
{"version":3,"file":"xyzBidimensionalFFT.js","sourceRoot":"","sources":["../../src/xyz/xyzBidimensionalFFT.ts"],"names":[],"mappings":"AAKA,OAAO,EAAE,UAAU,EAAE,MAAM,cAAc,CAAC;AAC1C,OAAO,EAEL,kBAAkB,GACnB,MAAM,iCAAiC,CAAC;AACzC,OAAO,EACL,oBAAoB,GAErB,MAAM,mCAAmC,CAAC;AAgB3C,MAAM,UAAU,mBAAmB,CACjC,IAAY,EACZ,OAAgC;IAEhC,eAAe,CAAC,IAAI,CAAC,CAAC;IAEtB,MAAM,EACJ,IAAI,EACJ,MAAM,EACN,kBAAkB,GAAG,CAAC,EACtB,WAAW,EAAE,kBAAkB,GAChC,GAAG,OAAO,CAAC;IAEZ,MAAM,WAAW,GAAG,UAAU,CAAC,IAAI,EAAE,EAAE,MAAM,EAAE,CAAC,CAAC;IAEjD,MAAM,EAAE,EAAE,EAAE,MAAM,EAAE,GAAG,WAAW,CAAC;IACnC,MAAM,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC;IAC7B,MAAM,SAAS,GAAG,MAAM,CAAC,CAAC,CAAC,CAAC,MAAM,CAAC;IACnC,MAAM,EAAE,MAAM,GAAG,EAAE,EAAE,QAAQ,GAAG,EAAE,EAAE,GAAG,OAAO,CAAC;IAE/C,MAAM,EAAE,WAAW,EAAE,aAAa,GAAG,kBAAkB,EAAE,GAAG,MAAM,CAAC;IAEnE,MAAM,EAAE,MAAM,EAAE,QAAQ,GAAG,CAAC,EAAE,GAAG,aAAa,IAAI,EAAE,CAAC;IACrD,MAAM,UAAU,GACd,CAAA,aAAa,aAAb,aAAa,uBAAb,aAAa,CAAE,QAAQ,KAAI,CAAC,IAAI,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,SAAS,GAAG,QAAQ,CAAC,CAAC,CAAC;IAE9E,MAAM,WAAW,GAAG,kBAAkB,CAAC,WAAW,EAAE;QAClD,GAAG,MAAM;QACT,MAAM;QACN,kBAAkB;QAClB,WAAW,EAAE,EAAE,QAAQ,EAAE,UAAU,EAAE;KACtC,CAAC,CAAC;IAEH,MAAM,EAAE,WAAW,EAAE,aAAa,EAAE,GAAG,OAAO,CAAC;IAC/C,MAAM,EAAE,MAAM,EAAE,QAAQ,GAAG,CAAC,EAAE,GAAG,aAAa,IAAI,EAAE,CAAC;IACrD,MAAM,UAAU,GACd,CAAA,aAAa,aAAb,aAAa,uBAAb,aAAa,CAAE,QAAQ,KAAI,CAAC,IAAI,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,MAAM,GAAG,QAAQ,CAAC,CAAC,CAAC;IAC3E,MAAM,EAAE,EAAE,EAAE,QAAQ,EAAE,EAAE,EAAE,QAAQ,EAAE,GAAG,oBAAoB,CAAC,WAAW,EAAE;QACvE,GAAG,QAAQ;QACX,MAAM;QACN,WAAW,EAAE,EAAE,QAAQ,EAAE,UAAU,EAAE;KACtC,CAAC,CAAC;IAEH,MAAM,QAAQ,GAAG,WAAW,CAAC,IAAI,CAAC,CAAC;IACnC,OAAO;QACL,EAAE,EAAE;YACF,CAAC,EAAE,oBAAoB,CAAC,QAAQ,CAAC;YACjC,IAAI,EAAE,QAAQ,CAAC,GAAG,EAAE;YACpB,IAAI,EAAE,QAAQ,CAAC,GAAG,EAAE;YACpB,GAAG,QAAQ;SACZ;QACD,EAAE,EAAE;YACF,CAAC,EAAE,oBAAoB,CAAC,QAAQ,CAAC;YACjC,IAAI,EAAE,QAAQ,CAAC,GAAG,EAAE;YACpB,IAAI,EAAE,QAAQ,CAAC,GAAG,EAAE;YACpB,GAAG,QAAQ;SACZ;KACF,CAAC;AACJ,CAAC;AAED,SAAS,eAAe,CAAC,IAAY;IACnC,IAAI,CAAC,CAAC,IAAI,IAAI,IAAI,CAAC,EAAE;QACnB,MAAM,IAAI,KAAK,CAAC,mDAAmD,CAAC,CAAC;KACtE;AACH,CAAC;AAED,SAAS,oBAAoB,CAAC,IAAY;IACxC,MAAM,MAAM,GAAkB,IAAI,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;IACnD,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,IAAI,CAAC,IAAI,EAAE,CAAC,EAAE,EAAE;QAClC,MAAM,CAAC,CAAC,CAAC,GAAG,IAAI,YAAY,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC,CAAC;KAC9C;IACD,OAAO,MAAM,CAAC;AAChB,CAAC;AAED,SAAS,WAAW,CAAC,IAAY;IAC/B,MAAM,GAAG,GAAa,EAAE,CAAC;IACzB,MAAM,GAAG,GAAa,EAAE,CAAC;IACzB,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,IAAI,CAAC,aAAa,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;QAClD,MAAM,aAAa,GAAG,MAAM,CAAC,UAAU,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC,CAAC,CAAC,CAAC;QAC/D,MAAM,eAAe,GAAG,MAAM,CAAC,UAAU,CAAC,IAAI,CAAC,eAAe,CAAC,CAAC,CAAC,CAAC,CAAC;QACnE,MAAM,aAAa,GAAG,MAAM,CAAC,UAAU,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC,CAAC,CAAC,CAAC;QAC/D,MAAM,MAAM,GAAG,eAAe,GAAG,aAAa,CAAC;QAC/C,GAAG,CAAC,IAAI,CAAC,MAAM,GAAG,aAAa,GAAG,GAAG,CAAC,CAAC;QACvC,GAAG,CAAC,IAAI,CAAC,MAAM,GAAG,aAAa,GAAG,GAAG,CAAC,CAAC;KACxC;IAED,OAAO;QACL,IAAI,EAAE,GAAG,CAAC,CAAC,CAAC;QACZ,IAAI,EAAE,GAAG,CAAC,CAAC,CAAC;QACZ,IAAI,EAAE,GAAG,CAAC,CAAC,CAAC;QACZ,IAAI,EAAE,GAAG,CAAC,CAAC,CAAC;KACb,CAAC;AACJ,CAAC"}
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@@ -26,6 +26,7 @@ export function xyzJResAnalyzer(signals, options = {}) {
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26
26
|
return getZones ? formatZones(signals2D) : signals2D;
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27
27
|
}
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|
28
28
|
function compilePattern(signals, options) {
|
|
29
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+
var _a;
|
|
29
30
|
let { observedFrequencies, tolerances, nuclei, jAnalyzer: jAnalyzerOptions, } = options;
|
|
30
31
|
let signalOptions = {
|
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31
32
|
observedFrequencies,
|
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@@ -35,40 +36,48 @@ function compilePattern(signals, options) {
|
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|
35
36
|
dy: signals[0].y.resolution,
|
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36
37
|
};
|
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37
38
|
const defaultWidth = 0.02 * observedFrequencies[0];
|
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38
|
-
const newSignals =
|
|
39
|
+
const newSignals = [];
|
|
39
40
|
//adapt to 1D jAnalyzer
|
|
40
|
-
for (const signal of
|
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41
|
-
let peaks =
|
|
42
|
-
|
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43
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-
|
|
44
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-
|
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45
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-
|
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46
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-
|
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47
|
-
signal.integralData = {
|
|
48
|
-
from: Number.MAX_SAFE_INTEGER,
|
|
49
|
-
to: Number.MIN_SAFE_INTEGER,
|
|
50
|
-
};
|
|
51
|
-
for (const peak of peaks) {
|
|
52
|
-
if (!peak.width)
|
|
53
|
-
peak.width = defaultWidth;
|
|
41
|
+
for (const signal of signals) {
|
|
42
|
+
let peaks = [];
|
|
43
|
+
for (const peak of signal.peaks || []) {
|
|
44
|
+
peaks.push({
|
|
45
|
+
...peak,
|
|
46
|
+
width: defaultWidth,
|
|
47
|
+
});
|
|
54
48
|
}
|
|
55
49
|
peaks.sort((a, b) => a.y - b.y);
|
|
50
|
+
newSignals.push({
|
|
51
|
+
nbPeaks: peaks.length,
|
|
52
|
+
multiplicity: '',
|
|
53
|
+
pattern: '',
|
|
54
|
+
startX: peaks[0].y - defaultWidth,
|
|
55
|
+
stopX: peaks[peaks.length - 1].y + defaultWidth,
|
|
56
|
+
delta: signal.y.delta,
|
|
57
|
+
observe: observedFrequencies[1],
|
|
58
|
+
integralData: {
|
|
59
|
+
value: -1,
|
|
60
|
+
from: Number.MAX_SAFE_INTEGER,
|
|
61
|
+
to: Number.MIN_SAFE_INTEGER,
|
|
62
|
+
},
|
|
63
|
+
peaks,
|
|
64
|
+
});
|
|
56
65
|
}
|
|
57
66
|
for (let i = 0; i < signals.length; i++) {
|
|
58
|
-
jAnalyzer.compilePattern(newSignals[i], jAnalyzerOptions);
|
|
59
|
-
if (
|
|
60
|
-
|
|
61
|
-
|
|
67
|
+
const signal = jAnalyzer.compilePattern(newSignals[i], jAnalyzerOptions);
|
|
68
|
+
if (signal.maskPattern &&
|
|
69
|
+
signal.multiplicity !== 'm' &&
|
|
70
|
+
signal.multiplicity !== '') {
|
|
62
71
|
// Create a new signal with the removed peaks
|
|
63
72
|
let peaksO = [];
|
|
64
|
-
for (let j =
|
|
65
|
-
if (
|
|
66
|
-
let peakR =
|
|
73
|
+
for (let j = signal.maskPattern.length - 1; j >= 0; j--) {
|
|
74
|
+
if (!signal.maskPattern[j]) {
|
|
75
|
+
let peakR = signal.peaks.splice(j, 1)[0];
|
|
67
76
|
peaksO.push(peakR);
|
|
68
|
-
|
|
69
|
-
|
|
70
|
-
|
|
71
|
-
|
|
77
|
+
signal.mask.splice(j, 1);
|
|
78
|
+
(_a = signal.mask2) === null || _a === void 0 ? void 0 : _a.splice(j, 1);
|
|
79
|
+
signal.maskPattern.splice(j, 1);
|
|
80
|
+
signal.nbPeaks--;
|
|
72
81
|
}
|
|
73
82
|
}
|
|
74
83
|
if (peaksO.length > 0) {
|
|
@@ -1 +1 @@
|
|
|
1
|
-
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|
|
1
|
+
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|
package/package.json
CHANGED
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
{
|
|
2
2
|
"name": "nmr-processing",
|
|
3
|
-
"version": "9.5.
|
|
3
|
+
"version": "9.5.1-pre.1685396168",
|
|
4
4
|
"description": "Pure functions allowing to process NMR spectra.",
|
|
5
5
|
"main": "./lib/index.js",
|
|
6
6
|
"module": "./lib-esm/index.js",
|
|
@@ -39,6 +39,7 @@
|
|
|
39
39
|
"homepage": "https://github.com/cheminfo/nmr-processing#readme",
|
|
40
40
|
"devDependencies": {
|
|
41
41
|
"@types/jest": "^29.5.0",
|
|
42
|
+
"@types/lodash": "^4.14.195",
|
|
42
43
|
"cheminfo-build": "^1.2.0",
|
|
43
44
|
"cheminfo-types": "^1.4.0",
|
|
44
45
|
"eslint": "^8.36.0",
|
|
@@ -56,25 +57,32 @@
|
|
|
56
57
|
"dependencies": {
|
|
57
58
|
"@lukeed/uuid": "^2.0.1",
|
|
58
59
|
"binary-search": "^1.3.6",
|
|
60
|
+
"brukerconverter": "^6.1.2",
|
|
59
61
|
"cross-fetch": "^3.1.5",
|
|
60
62
|
"form-data": "^4.0.0",
|
|
61
63
|
"gyromagnetic-ratio": "^1.0.0",
|
|
62
64
|
"is-any-array": "^2.0.0",
|
|
63
65
|
"linear-sum-assignment": "^1.0.5",
|
|
66
|
+
"lodash": "^4.17.21",
|
|
67
|
+
"ml-airpls": "^1.0.1",
|
|
64
68
|
"ml-array-mean": "^1.1.6",
|
|
65
69
|
"ml-array-rescale": "^1.3.7",
|
|
66
70
|
"ml-array-sum": "^1.1.6",
|
|
71
|
+
"ml-array-xy-equally-spaced": "^1.2.1",
|
|
72
|
+
"ml-baseline-correction-regression": "^1.0.1",
|
|
67
73
|
"ml-direct": "^0.1.3",
|
|
68
|
-
"ml-gsd": "^12.1.
|
|
74
|
+
"ml-gsd": "^12.1.2",
|
|
69
75
|
"ml-hclust": "^3.1.0",
|
|
70
76
|
"ml-levenberg-marquardt": "^4.1.0",
|
|
71
77
|
"ml-matrix": "^6.10.4",
|
|
72
78
|
"ml-matrix-convolution": "^1.0.0",
|
|
73
79
|
"ml-matrix-peaks-finder": "^1.0.0",
|
|
74
80
|
"ml-peak-shape-generator": "^4.1.2",
|
|
81
|
+
"ml-signal-processing": "^1.0.3",
|
|
75
82
|
"ml-simple-clustering": "^0.1.0",
|
|
76
83
|
"ml-sparse-matrix": "^2.1.0",
|
|
77
84
|
"ml-spectra-processing": "^12.4.0",
|
|
85
|
+
"ml-stat": "^1.3.3",
|
|
78
86
|
"ml-tree-set": "^0.1.1",
|
|
79
87
|
"nmr-correlation": "^2.3.3",
|
|
80
88
|
"nmredata": "^0.9.2",
|