npm - molstar - Versions diffs - 3.44.0 → 3.45.0 - Mend

molstar 3.44.0 → 3.45.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (272) hide show

package/lib/mol-repr/shape/loci/orientation.d.ts CHANGED Viewed

@@ -19,7 +19,7 @@ export declare const OrientationParams: {
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     bumpFrequency: PD.Numeric;
     bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;

package/lib/mol-repr/shape/loci/plane.d.ts CHANGED Viewed

@@ -18,7 +18,7 @@ export declare const PlaneParams: {
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     bumpFrequency: PD.Numeric;
     bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;

package/lib/mol-repr/shape/model/unitcell.d.ts CHANGED Viewed

@@ -21,7 +21,7 @@ export declare const UnitcellParams: {
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     bumpFrequency: PD.Numeric;
     bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;

package/lib/mol-repr/structure/complex-visual.d.ts CHANGED Viewed

@@ -2,6 +2,7 @@
  * Copyright (c) 2018-2023 mol* contributors, licensed under MIT, See LICENSE file for more info.
  *
  * @author Alexander Rose <alexander.rose@weirdbyte.de>
+ * @author Gianluca Tomasello <giagitom@gmail.com>
  */
 import { ParamDefinition as PD } from '../../mol-util/param-definition';
 import { Visual, VisualContext } from '../visual';
@@ -28,7 +29,7 @@ export interface ComplexVisual<P extends StructureParams> extends Visual<Structu
 interface ComplexVisualBuilder<P extends StructureParams, G extends Geometry> {
     defaultProps: PD.Values<P>;
     createGeometry(ctx: VisualContext, structure: Structure, theme: Theme, props: PD.Values<P>, geometry?: G): Promise<G> | G;
-    createLocationIterator(structure: Structure): LocationIterator;
+    createLocationIterator(structure: Structure, props: PD.Values<P>): LocationIterator;
     getLoci(pickingId: PickingId, structure: Structure, id: number): Loci;
     eachLocation(loci: Loci, structure: Structure, apply: (interval: Interval) => boolean, isMarking: boolean): boolean;
     setUpdateState(state: VisualUpdateState, newProps: PD.Values<P>, currentProps: PD.Values<P>, newTheme: Theme, currentTheme: Theme, newStructure: Structure, currentStructure: Structure): void;
@@ -48,7 +49,7 @@ export declare const ComplexMeshParams: {
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     bumpFrequency: PD.Numeric;
     bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
@@ -81,7 +82,7 @@ export declare const ComplexSpheresParams: {
     doubleSided: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     solidInterior: PD.BooleanParam;
     clipPrimitive: PD.BooleanParam;
     approximate: PD.BooleanParam;
@@ -119,10 +120,11 @@ export declare const ComplexCylindersParams: {
     doubleSided: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     solidInterior: PD.BooleanParam;
     bumpFrequency: PD.Numeric;
     bumpAmplitude: PD.Numeric;
+    colorMode: PD.Select<"default" | "interpolate">;
     alpha: PD.Numeric;
     quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
     material: PD.Group<PD.Normalize<{
@@ -258,7 +260,7 @@ export declare const ComplexTextureMeshParams: {
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     bumpFrequency: PD.Numeric;
     bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;

package/lib/mol-repr/structure/complex-visual.js CHANGED Viewed

@@ -2,6 +2,7 @@
  * Copyright (c) 2018-2023 mol* contributors, licensed under MIT, See LICENSE file for more info.
  *
  * @author Alexander Rose <alexander.rose@weirdbyte.de>
+ * @author Gianluca Tomasello <giagitom@gmail.com>
  */
 import { __assign } from "tslib";
 import { Visual } from '../visual';
@@ -96,7 +97,7 @@ export function ComplexVisual(builder, materialId) {
     }
     function update(newGeometry) {
         if (updateState.createNew) {
-            locationIt = createLocationIterator(newStructure);
+            locationIt = createLocationIterator(newStructure, newProps);
             if (newGeometry) {
                 renderObject = createComplexRenderObject(newStructure, newGeometry, locationIt, newTheme, newProps, materialId);
                 positionIt = createPositionIterator(newGeometry, renderObject.values);
@@ -111,7 +112,7 @@ export function ComplexVisual(builder, materialId) {
             }
             if (updateState.updateTransform) {
                 // console.log('update transform')
-                locationIt = createLocationIterator(newStructure);
+                locationIt = createLocationIterator(newStructure, newProps);
                 var instanceCount = locationIt.instanceCount, groupCount = locationIt.groupCount;
                 if (newProps.instanceGranularity) {
                     createMarkers(instanceCount, 'instance', renderObject.values);

package/lib/mol-repr/structure/params.d.ts CHANGED Viewed

@@ -18,7 +18,7 @@ export declare const StructureMeshParams: {
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     bumpFrequency: PD.Numeric;
     bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
@@ -46,7 +46,7 @@ export declare const StructureSpheresParams: {
     doubleSided: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     solidInterior: PD.BooleanParam;
     clipPrimitive: PD.BooleanParam;
     approximate: PD.BooleanParam;
@@ -79,10 +79,11 @@ export declare const StructureCylindersParams: {
     doubleSided: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     solidInterior: PD.BooleanParam;
     bumpFrequency: PD.Numeric;
     bumpAmplitude: PD.Numeric;
+    colorMode: PD.Select<"default" | "interpolate">;
     alpha: PD.Numeric;
     quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
     material: PD.Group<PD.Normalize<{
@@ -222,7 +223,7 @@ export declare const StructureTextureMeshParams: {
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     bumpFrequency: PD.Numeric;
     bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;

package/lib/mol-repr/structure/registry.d.ts CHANGED Viewed

@@ -15,6 +15,7 @@ export declare namespace StructureRepresentationRegistry {
             sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"polymer-trace" | "polymer-gap" | "nucleotide-ring" | "nucleotide-atomic-ring-fill" | "nucleotide-atomic-bond" | "nucleotide-atomic-element" | "nucleotide-block" | "direction-wedge">;
             bumpFrequency: import("../../mol-util/param-definition").ParamDefinition.Numeric;
+            colorMode: import("../../mol-util/param-definition").ParamDefinition.Select<"default" | "interpolate">;
             unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
             includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
@@ -22,7 +23,7 @@ export declare namespace StructureRepresentationRegistry {
             flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             xrayShaded: import("../../mol-util/param-definition").ParamDefinition.Select<boolean | "inverted">;
-            transparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.Select<string>;
+            transparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.Select<"on" | "off" | "opaque">;
             bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -62,6 +63,7 @@ export declare namespace StructureRepresentationRegistry {
             sizeAspectRatio: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"polymer-gap" | "polymer-backbone-cylinder" | "polymer-backbone-sphere">;
             bumpFrequency: import("../../mol-util/param-definition").ParamDefinition.Numeric;
+            colorMode: import("../../mol-util/param-definition").ParamDefinition.Select<"default" | "interpolate">;
             sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             radialSegments: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
@@ -71,7 +73,7 @@ export declare namespace StructureRepresentationRegistry {
             flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             xrayShaded: import("../../mol-util/param-definition").ParamDefinition.Select<boolean | "inverted">;
-            transparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.Select<string>;
+            transparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.Select<"on" | "off" | "opaque">;
             bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -124,10 +126,11 @@ export declare namespace StructureRepresentationRegistry {
             dashCap: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             stubCap: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             radialSegments: import("../../mol-util/param-definition").ParamDefinition.Numeric;
+            colorMode: import("../../mol-util/param-definition").ParamDefinition.Select<"default" | "interpolate">;
             doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             xrayShaded: import("../../mol-util/param-definition").ParamDefinition.Select<boolean | "inverted">;
-            transparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.Select<string>;
+            transparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.Select<"on" | "off" | "opaque">;
             solidInterior: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
@@ -172,6 +175,7 @@ export declare namespace StructureRepresentationRegistry {
             dashCap: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             stubCap: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             radialSegments: import("../../mol-util/param-definition").ParamDefinition.Numeric;
+            colorMode: import("../../mol-util/param-definition").ParamDefinition.Select<"default" | "interpolate">;
             unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
             includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
@@ -179,7 +183,7 @@ export declare namespace StructureRepresentationRegistry {
             flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             xrayShaded: import("../../mol-util/param-definition").ParamDefinition.Select<boolean | "inverted">;
-            transparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.Select<string>;
+            transparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.Select<"on" | "off" | "opaque">;
             bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -229,10 +233,11 @@ export declare namespace StructureRepresentationRegistry {
             dashCap: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             stubCap: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             radialSegments: import("../../mol-util/param-definition").ParamDefinition.Numeric;
+            colorMode: import("../../mol-util/param-definition").ParamDefinition.Select<"default" | "interpolate">;
             doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             xrayShaded: import("../../mol-util/param-definition").ParamDefinition.Select<boolean | "inverted">;
-            transparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.Select<string>;
+            transparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.Select<"on" | "off" | "opaque">;
             solidInterior: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
@@ -298,7 +303,7 @@ export declare namespace StructureRepresentationRegistry {
             flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             xrayShaded: import("../../mol-util/param-definition").ParamDefinition.Select<boolean | "inverted">;
-            transparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.Select<string>;
+            transparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.Select<"on" | "off" | "opaque">;
             bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
         }, "gaussian-surface">;
         'gaussian-volume': import("./representation").StructureRepresentationProvider<{
@@ -464,7 +469,7 @@ export declare namespace StructureRepresentationRegistry {
             flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             xrayShaded: import("../../mol-util/param-definition").ParamDefinition.Select<boolean | "inverted">;
-            transparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.Select<string>;
+            transparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.Select<"on" | "off" | "opaque">;
             bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
         }, "molecular-surface">;
         orientation: import("./representation").StructureRepresentationProvider<{
@@ -479,7 +484,7 @@ export declare namespace StructureRepresentationRegistry {
             flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             xrayShaded: import("../../mol-util/param-definition").ParamDefinition.Select<boolean | "inverted">;
-            transparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.Select<string>;
+            transparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.Select<"on" | "off" | "opaque">;
             bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -541,7 +546,7 @@ export declare namespace StructureRepresentationRegistry {
             flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             xrayShaded: import("../../mol-util/param-definition").ParamDefinition.Select<boolean | "inverted">;
-            transparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.Select<string>;
+            transparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.Select<"on" | "off" | "opaque">;
             bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -579,7 +584,7 @@ export declare namespace StructureRepresentationRegistry {
             doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             xrayShaded: import("../../mol-util/param-definition").ParamDefinition.Select<boolean | "inverted">;
-            transparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.Select<string>;
+            transparentBackfaces: import("../../mol-util/param-definition").ParamDefinition.Select<"on" | "off" | "opaque">;
             solidInterior: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             clipPrimitive: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             approximate: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;

package/lib/mol-repr/structure/representation/backbone.d.ts CHANGED Viewed

@@ -12,6 +12,7 @@ export declare const BackboneParams: {
     sizeAspectRatio: PD.Numeric;
     visuals: PD.MultiSelect<"polymer-gap" | "polymer-backbone-cylinder" | "polymer-backbone-sphere">;
     bumpFrequency: PD.Numeric;
+    colorMode: PD.Select<"default" | "interpolate">;
     sizeFactor: PD.Numeric;
     radialSegments: PD.Numeric;
     unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
@@ -21,7 +22,7 @@ export declare const BackboneParams: {
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
     quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -53,6 +54,7 @@ export declare function getBackboneParams(ctx: ThemeRegistryContext, structure:
     sizeAspectRatio: PD.Numeric;
     visuals: PD.MultiSelect<"polymer-gap" | "polymer-backbone-cylinder" | "polymer-backbone-sphere">;
     bumpFrequency: PD.Numeric;
+    colorMode: PD.Select<"default" | "interpolate">;
     sizeFactor: PD.Numeric;
     radialSegments: PD.Numeric;
     unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
@@ -62,7 +64,7 @@ export declare function getBackboneParams(ctx: ThemeRegistryContext, structure:
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
     quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -95,6 +97,7 @@ export declare const BackboneRepresentationProvider: StructureRepresentationProv
     sizeAspectRatio: PD.Numeric;
     visuals: PD.MultiSelect<"polymer-gap" | "polymer-backbone-cylinder" | "polymer-backbone-sphere">;
     bumpFrequency: PD.Numeric;
+    colorMode: PD.Select<"default" | "interpolate">;
     sizeFactor: PD.Numeric;
     radialSegments: PD.Numeric;
     unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
@@ -104,7 +107,7 @@ export declare const BackboneRepresentationProvider: StructureRepresentationProv
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
     quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;

package/lib/mol-repr/structure/representation/backbone.js CHANGED Viewed

@@ -17,7 +17,7 @@ var BackboneVisuals = {
     'polymer-backbone-sphere': function (ctx, getParams) { return UnitsRepresentation('Polymer backbone sphere', ctx, getParams, PolymerBackboneSphereVisual); },
     'polymer-gap': function (ctx, getParams) { return UnitsRepresentation('Polymer gap cylinder', ctx, getParams, PolymerGapVisual); },
 };
-export var BackboneParams = __assign(__assign(__assign(__assign({}, PolymerBackboneSphereParams), PolymerBackboneCylinderParams), PolymerGapParams), { sizeAspectRatio: PD.Numeric(1, { min: 0.1, max: 3, step: 0.1 }), visuals: PD.MultiSelect(['polymer-backbone-cylinder', 'polymer-backbone-sphere', 'polymer-gap'], PD.objectToOptions(BackboneVisuals)), bumpFrequency: PD.Numeric(0, { min: 0, max: 10, step: 0.1 }, BaseGeometry.ShadingCategory) });
+export var BackboneParams = __assign(__assign(__assign(__assign({}, PolymerBackboneSphereParams), PolymerBackboneCylinderParams), PolymerGapParams), { sizeAspectRatio: PD.Numeric(1, { min: 0.1, max: 3, step: 0.1 }), visuals: PD.MultiSelect(['polymer-backbone-cylinder', 'polymer-backbone-sphere', 'polymer-gap'], PD.objectToOptions(BackboneVisuals)), bumpFrequency: PD.Numeric(0, { min: 0, max: 10, step: 0.1 }, BaseGeometry.ShadingCategory), colorMode: PD.Select('default', PD.arrayToOptions(['default', 'interpolate']), __assign(__assign({}, BaseGeometry.ShadingCategory), { isHidden: true })) });
 export function getBackboneParams(ctx, structure) {
     var params = PD.clone(BackboneParams);
     var hasGaps = false;

package/lib/mol-repr/structure/representation/ball-and-stick.d.ts CHANGED Viewed

@@ -34,10 +34,11 @@ export declare const BallAndStickParams: {
     dashCap: PD.BooleanParam;
     stubCap: PD.BooleanParam;
     radialSegments: PD.Numeric;
+    colorMode: PD.Select<"default" | "interpolate">;
     doubleSided: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     solidInterior: PD.BooleanParam;
     bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
@@ -94,10 +95,11 @@ export declare function getBallAndStickParams(ctx: ThemeRegistryContext, structu
     dashCap: PD.BooleanParam;
     stubCap: PD.BooleanParam;
     radialSegments: PD.Numeric;
+    colorMode: PD.Select<"default" | "interpolate">;
     doubleSided: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     solidInterior: PD.BooleanParam;
     bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
@@ -155,10 +157,11 @@ export declare const BallAndStickRepresentationProvider: StructureRepresentation
     dashCap: PD.BooleanParam;
     stubCap: PD.BooleanParam;
     radialSegments: PD.Numeric;
+    colorMode: PD.Select<"default" | "interpolate">;
     doubleSided: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     solidInterior: PD.BooleanParam;
     bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;

package/lib/mol-repr/structure/representation/carbohydrate.d.ts CHANGED Viewed

@@ -23,6 +23,7 @@ export declare const CarbohydrateParams: {
     dashCap: PD.BooleanParam;
     stubCap: PD.BooleanParam;
     radialSegments: PD.Numeric;
+    colorMode: PD.Select<"default" | "interpolate">;
     unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
@@ -30,7 +31,7 @@ export declare const CarbohydrateParams: {
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
     quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -70,6 +71,7 @@ export declare function getCarbohydrateParams(ctx: ThemeRegistryContext, structu
     dashCap: PD.BooleanParam;
     stubCap: PD.BooleanParam;
     radialSegments: PD.Numeric;
+    colorMode: PD.Select<"default" | "interpolate">;
     unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
@@ -77,7 +79,7 @@ export declare function getCarbohydrateParams(ctx: ThemeRegistryContext, structu
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
     quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -118,6 +120,7 @@ export declare const CarbohydrateRepresentationProvider: StructureRepresentation
     dashCap: PD.BooleanParam;
     stubCap: PD.BooleanParam;
     radialSegments: PD.Numeric;
+    colorMode: PD.Select<"default" | "interpolate">;
     unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
@@ -125,7 +128,7 @@ export declare const CarbohydrateRepresentationProvider: StructureRepresentation
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
     quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;

package/lib/mol-repr/structure/representation/cartoon.d.ts CHANGED Viewed

@@ -13,6 +13,7 @@ export declare const CartoonParams: {
     sizeFactor: PD.Numeric;
     visuals: PD.MultiSelect<"polymer-trace" | "polymer-gap" | "nucleotide-ring" | "nucleotide-atomic-ring-fill" | "nucleotide-atomic-bond" | "nucleotide-atomic-element" | "nucleotide-block" | "direction-wedge">;
     bumpFrequency: PD.Numeric;
+    colorMode: PD.Select<"default" | "interpolate">;
     unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
@@ -20,7 +21,7 @@ export declare const CartoonParams: {
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
     quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -61,6 +62,7 @@ export declare function getCartoonParams(ctx: ThemeRegistryContext, structure: S
     sizeFactor: PD.Numeric;
     visuals: PD.MultiSelect<"polymer-trace" | "polymer-gap" | "nucleotide-ring" | "nucleotide-atomic-ring-fill" | "nucleotide-atomic-bond" | "nucleotide-atomic-element" | "nucleotide-block" | "direction-wedge">;
     bumpFrequency: PD.Numeric;
+    colorMode: PD.Select<"default" | "interpolate">;
     unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
@@ -68,7 +70,7 @@ export declare function getCartoonParams(ctx: ThemeRegistryContext, structure: S
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
     quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -110,6 +112,7 @@ export declare const CartoonRepresentationProvider: StructureRepresentationProvi
     sizeFactor: PD.Numeric;
     visuals: PD.MultiSelect<"polymer-trace" | "polymer-gap" | "nucleotide-ring" | "nucleotide-atomic-ring-fill" | "nucleotide-atomic-bond" | "nucleotide-atomic-element" | "nucleotide-block" | "direction-wedge">;
     bumpFrequency: PD.Numeric;
+    colorMode: PD.Select<"default" | "interpolate">;
     unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
@@ -117,7 +120,7 @@ export declare const CartoonRepresentationProvider: StructureRepresentationProvi
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
     quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;

package/lib/mol-repr/structure/representation/cartoon.js CHANGED Viewed

@@ -31,7 +31,7 @@ var CartoonVisuals = {
     'nucleotide-atomic-element': function (ctx, getParams) { return UnitsRepresentation('Nucleotide atomic element', ctx, getParams, NucleotideAtomicElementVisual); },
     'direction-wedge': function (ctx, getParams) { return UnitsRepresentation('Polymer direction wedge', ctx, getParams, PolymerDirectionVisual); },
 };
-export var CartoonParams = __assign(__assign(__assign(__assign(__assign(__assign(__assign(__assign(__assign({}, PolymerTraceParams), PolymerGapParams), NucleotideBlockParams), NucleotideRingParams), NucleotideAtomicBondParams), NucleotideAtomicElementParams), NucleotideAtomicRingFillParams), PolymerDirectionParams), { sizeFactor: PD.Numeric(0.2, { min: 0, max: 10, step: 0.01 }), visuals: PD.MultiSelect(['polymer-trace', 'polymer-gap', 'nucleotide-ring', 'nucleotide-atomic-ring-fill', 'nucleotide-atomic-bond', 'nucleotide-atomic-element'], PD.objectToOptions(CartoonVisuals)), bumpFrequency: PD.Numeric(2, { min: 0, max: 10, step: 0.1 }, BaseGeometry.ShadingCategory) });
+export var CartoonParams = __assign(__assign(__assign(__assign(__assign(__assign(__assign(__assign(__assign({}, PolymerTraceParams), PolymerGapParams), NucleotideBlockParams), NucleotideRingParams), NucleotideAtomicBondParams), NucleotideAtomicElementParams), NucleotideAtomicRingFillParams), PolymerDirectionParams), { sizeFactor: PD.Numeric(0.2, { min: 0, max: 10, step: 0.01 }), visuals: PD.MultiSelect(['polymer-trace', 'polymer-gap', 'nucleotide-ring', 'nucleotide-atomic-ring-fill', 'nucleotide-atomic-bond', 'nucleotide-atomic-element'], PD.objectToOptions(CartoonVisuals)), bumpFrequency: PD.Numeric(2, { min: 0, max: 10, step: 0.1 }, BaseGeometry.ShadingCategory), colorMode: PD.Select('default', PD.arrayToOptions(['default', 'interpolate']), __assign(__assign({}, BaseGeometry.ShadingCategory), { isHidden: true })) });
 export function getCartoonParams(ctx, structure) {
     var params = PD.clone(CartoonParams);
     var hasNucleotides = false;

package/lib/mol-repr/structure/representation/ellipsoid.d.ts CHANGED Viewed

@@ -34,10 +34,11 @@ export declare const EllipsoidParams: {
     dashCap: PD.BooleanParam;
     stubCap: PD.BooleanParam;
     radialSegments: PD.Numeric;
+    colorMode: PD.Select<"default" | "interpolate">;
     doubleSided: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     solidInterior: PD.BooleanParam;
     bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
@@ -89,10 +90,11 @@ export declare function getEllipsoidParams(ctx: ThemeRegistryContext, structure:
     dashCap: PD.BooleanParam;
     stubCap: PD.BooleanParam;
     radialSegments: PD.Numeric;
+    colorMode: PD.Select<"default" | "interpolate">;
     doubleSided: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     solidInterior: PD.BooleanParam;
     bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
@@ -145,10 +147,11 @@ export declare const EllipsoidRepresentationProvider: StructureRepresentationPro
     dashCap: PD.BooleanParam;
     stubCap: PD.BooleanParam;
     radialSegments: PD.Numeric;
+    colorMode: PD.Select<"default" | "interpolate">;
     doubleSided: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     solidInterior: PD.BooleanParam;
     bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;

package/lib/mol-repr/structure/representation/gaussian-surface.d.ts CHANGED Viewed

@@ -49,7 +49,7 @@ export declare const GaussianSurfaceParams: {
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     bumpAmplitude: PD.Numeric;
 };
 export type GaussianSurfaceParams = typeof GaussianSurfaceParams;
@@ -94,7 +94,7 @@ export declare function getGaussianSurfaceParams(ctx: ThemeRegistryContext, stru
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     bumpAmplitude: PD.Numeric;
 };
 export type GaussianSurfaceRepresentation = StructureRepresentation<GaussianSurfaceParams>;
@@ -140,6 +140,6 @@ export declare const GaussianSurfaceRepresentationProvider: StructureRepresentat
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     bumpAmplitude: PD.Numeric;
 }, "gaussian-surface">;

package/lib/mol-repr/structure/representation/molecular-surface.d.ts CHANGED Viewed

@@ -48,7 +48,7 @@ export declare const MolecularSurfaceParams: {
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     bumpAmplitude: PD.Numeric;
 };
 export type MolecularSurfaceParams = typeof MolecularSurfaceParams;
@@ -92,7 +92,7 @@ export declare function getMolecularSurfaceParams(ctx: ThemeRegistryContext, str
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     bumpAmplitude: PD.Numeric;
 };
 export type MolecularSurfaceRepresentation = StructureRepresentation<MolecularSurfaceParams>;
@@ -137,6 +137,6 @@ export declare const MolecularSurfaceRepresentationProvider: StructureRepresenta
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     bumpAmplitude: PD.Numeric;
 }, "molecular-surface">;

package/lib/mol-repr/structure/representation/orientation.d.ts CHANGED Viewed

@@ -20,7 +20,7 @@ export declare const OrientationParams: {
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
     quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -54,7 +54,7 @@ export declare function getOrientationParams(ctx: ThemeRegistryContext, structur
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
     quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
@@ -89,7 +89,7 @@ export declare const OrientationRepresentationProvider: StructureRepresentationP
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.Select<boolean | "inverted">;
-    transparentBackfaces: PD.Select<string>;
+    transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
     bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
     quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;