molstar 3.2.0 → 3.4.0

package/lib/commonjs/mol-model-props/sequence/themes/sifts-mapping.js

@@ -16,7 +16,7 @@ var DefaultColor = (0, color_1.Color)(0xFAFAFA);
 var Description = 'Assigns a color based on SIFTS mapping.';
 // same colors for same accessions
 var globalAccessionMap = new Map();
-exports.SIFTSMappingColorThemeParams = (0, tslib_1.__assign)({}, (0, palette_1.getPaletteParams)({ type: 'colors', colorList: 'set-1' }));
+exports.SIFTSMappingColorThemeParams = tslib_1.__assign({}, (0, palette_1.getPaletteParams)({ type: 'colors', colorList: 'set-1' }));
 function getSIFTSMappingColorThemeParams(ctx) {
     return exports.SIFTSMappingColorThemeParams; // TODO return copy
 }
@@ -83,9 +83,9 @@ exports.SIFTSMappingColorThemeProvider = {
     defaultValues: param_definition_1.ParamDefinition.getDefaultValues(exports.SIFTSMappingColorThemeParams),
     isApplicable: function (ctx) { var _a; return !!((_a = ctx.structure) === null || _a === void 0 ? void 0 : _a.models.some(function (m) { return sifts_mapping_1.SIFTSMapping.Provider.isApplicable(m); })); },
     ensureCustomProperties: {
-        attach: function (ctx, data) { return (0, tslib_1.__awaiter)(void 0, void 0, void 0, function () {
+        attach: function (ctx, data) { return tslib_1.__awaiter(void 0, void 0, void 0, function () {
             var _i, _a, m;
-            return (0, tslib_1.__generator)(this, function (_b) {
+            return tslib_1.__generator(this, function (_b) {
                 switch (_b.label) {
                     case 0:
                         if (!data.structure)
@@ -116,4 +116,3 @@ exports.SIFTSMappingColorThemeProvider = {
         }
     }
 };
-//# sourceMappingURL=sifts-mapping.js.map

package/lib/commonjs/mol-plugin/animation-loop.js

@@ -30,8 +30,8 @@ var PluginAnimationLoop = /** @class */ (function () {
     });
     PluginAnimationLoop.prototype.tick = function (t, options) {
         var _a;
-        return (0, tslib_1.__awaiter)(this, void 0, void 0, function () {
-            return (0, tslib_1.__generator)(this, function (_b) {
+        return tslib_1.__awaiter(this, void 0, void 0, function () {
+            return tslib_1.__generator(this, function (_b) {
                 switch (_b.label) {
                     case 0: return [4 /*yield*/, this.plugin.managers.animation.tick(t, options === null || options === void 0 ? void 0 : options.isSynchronous, options === null || options === void 0 ? void 0 : options.animation)];
                     case 1:
@@ -72,4 +72,3 @@ var PluginAnimationLoop = /** @class */ (function () {
     return PluginAnimationLoop;
 }());
 exports.PluginAnimationLoop = PluginAnimationLoop;
-//# sourceMappingURL=animation-loop.js.map

package/lib/commonjs/mol-plugin/behavior/behavior.js

@@ -15,7 +15,7 @@ var mol_util_1 = require("../../mol-util");
 var PluginBehavior;
 (function (PluginBehavior) {
     var Root = /** @class */ (function (_super) {
-        (0, tslib_1.__extends)(Root, _super);
+        tslib_1.__extends(Root, _super);
         function Root() {
             return _super !== null && _super.apply(this, arguments) || this;
         }
@@ -23,7 +23,7 @@ var PluginBehavior;
     }(objects_1.PluginStateObject.Create({ name: 'Root', typeClass: 'Root' })));
     PluginBehavior.Root = Root;
     var Category = /** @class */ (function (_super) {
-        (0, tslib_1.__extends)(Category, _super);
+        tslib_1.__extends(Category, _super);
         function Category() {
             return _super !== null && _super.apply(this, arguments) || this;
         }
@@ -31,7 +31,7 @@ var PluginBehavior;
     }(objects_1.PluginStateObject.Create({ name: 'Category', typeClass: 'Object' })));
     PluginBehavior.Category = Category;
     var Behavior = /** @class */ (function (_super) {
-        (0, tslib_1.__extends)(Behavior, _super);
+        tslib_1.__extends(Behavior, _super);
         function Behavior() {
             return _super !== null && _super.apply(this, arguments) || this;
         }
@@ -79,9 +79,9 @@ var PluginBehavior;
             update: function (_a) {
                 var _this = this;
                 var b = _a.b, newParams = _a.newParams;
-                return mol_task_1.Task.create('Update Behavior', function () { return (0, tslib_1.__awaiter)(_this, void 0, void 0, function () {
+                return mol_task_1.Task.create('Update Behavior', function () { return tslib_1.__awaiter(_this, void 0, void 0, function () {
                     var updated;
-                    return (0, tslib_1.__generator)(this, function (_a) {
+                    return tslib_1.__generator(this, function (_a) {
                         switch (_a.label) {
                             case 0:
                                 if (!b.data.update)
@@ -176,4 +176,3 @@ var PluginBehavior;
     PluginBehavior.WithSubscribers = WithSubscribers;
 })(PluginBehavior || (PluginBehavior = {}));
 exports.PluginBehavior = PluginBehavior;
-//# sourceMappingURL=behavior.js.map

package/lib/commonjs/mol-plugin/behavior/dynamic/camera.js

@@ -40,7 +40,7 @@ exports.FocusLoci = behavior_1.PluginBehavior.create({
     name: 'camera-focus-loci',
     category: 'interaction',
     ctor: /** @class */ (function (_super) {
-        (0, tslib_1.__extends)(class_1, _super);
+        tslib_1.__extends(class_1, _super);
         function class_1() {
             return _super !== null && _super.apply(this, arguments) || this;
         }
@@ -72,7 +72,7 @@ exports.CameraAxisHelper = behavior_1.PluginBehavior.create({
     name: 'camera-axis-helper',
     category: 'interaction',
     ctor: /** @class */ (function (_super) {
-        (0, tslib_1.__extends)(class_2, _super);
+        tslib_1.__extends(class_2, _super);
         function class_2() {
             return _super !== null && _super.apply(this, arguments) || this;
         }
@@ -134,4 +134,3 @@ exports.CameraAxisHelper = behavior_1.PluginBehavior.create({
     params: function () { return ({}); },
     display: { name: 'Camera Axis Helper' }
 });
-//# sourceMappingURL=camera.js.map

package/lib/commonjs/mol-plugin/behavior/dynamic/custom-props/computed/accessible-surface-area.js

@@ -21,7 +21,7 @@ exports.AccessibleSurfaceArea = behavior_1.PluginBehavior.create({
     category: 'custom-props',
     display: { name: 'Accessible Surface Area' },
     ctor: /** @class */ (function (_super) {
-        (0, tslib_1.__extends)(class_1, _super);
+        tslib_1.__extends(class_1, _super);
         function class_1() {
             var _this = _super !== null && _super.apply(this, arguments) || this;
             _this.provider = accessible_surface_area_1.AccessibleSurfaceAreaProvider;
@@ -136,4 +136,3 @@ var isAccessible = (0, structure_selection_query_1.StructureSelectionQuery)('Acc
         return accessible_surface_area_1.AccessibleSurfaceAreaProvider.attach(ctx, structure);
     }
 });
-//# sourceMappingURL=accessible-surface-area.js.map

package/lib/commonjs/mol-plugin/behavior/dynamic/custom-props/computed/interactions.js

@@ -23,7 +23,7 @@ exports.Interactions = behavior_1.PluginBehavior.create({
     category: 'custom-props',
     display: { name: 'Interactions' },
     ctor: /** @class */ (function (_super) {
-        (0, tslib_1.__extends)(class_1, _super);
+        tslib_1.__extends(class_1, _super);
         function class_1() {
             var _this = _super !== null && _super.apply(this, arguments) || this;
             _this.provider = interactions_1.InteractionsProvider;
@@ -120,4 +120,3 @@ exports.Interactions = behavior_1.PluginBehavior.create({
         showTooltip: param_definition_1.ParamDefinition.Boolean(true)
     }); }
 });
-//# sourceMappingURL=interactions.js.map

package/lib/commonjs/mol-plugin/behavior/dynamic/custom-props/computed/secondary-structure.js

@@ -15,7 +15,7 @@ exports.SecondaryStructure = behavior_1.PluginBehavior.create({
     category: 'custom-props',
     display: { name: 'Secondary Structure' },
     ctor: /** @class */ (function (_super) {
-        (0, tslib_1.__extends)(class_1, _super);
+        tslib_1.__extends(class_1, _super);
         function class_1() {
             var _this = _super !== null && _super.apply(this, arguments) || this;
             _this.provider = secondary_structure_1.SecondaryStructureProvider;
@@ -39,4 +39,3 @@ exports.SecondaryStructure = behavior_1.PluginBehavior.create({
         autoAttach: param_definition_1.ParamDefinition.Boolean(false)
     }); }
 });
-//# sourceMappingURL=secondary-structure.js.map

package/lib/commonjs/mol-plugin/behavior/dynamic/custom-props/computed/valence-model.js

@@ -21,7 +21,7 @@ exports.ValenceModel = behavior_1.PluginBehavior.create({
     category: 'custom-props',
     display: { name: 'Valence Model' },
     ctor: /** @class */ (function (_super) {
-        (0, tslib_1.__extends)(class_1, _super);
+        tslib_1.__extends(class_1, _super);
         function class_1() {
             var _this = _super !== null && _super.apply(this, arguments) || this;
             _this.provider = valence_model_1.ValenceModelProvider;
@@ -100,4 +100,3 @@ exports.ValenceModel = behavior_1.PluginBehavior.create({
         showTooltip: param_definition_1.ParamDefinition.Boolean(true)
     }); }
 });
-//# sourceMappingURL=valence-model.js.map

package/lib/commonjs/mol-plugin/behavior/dynamic/custom-props/integrative/cross-link-restraint.js

@@ -17,7 +17,7 @@ exports.CrossLinkRestraint = behavior_1.PluginBehavior.create({
     category: 'custom-props',
     display: { name: 'Cross Link Restraint' },
     ctor: /** @class */ (function (_super) {
-        (0, tslib_1.__extends)(class_1, _super);
+        tslib_1.__extends(class_1, _super);
         function class_1() {
             var _this = _super !== null && _super.apply(this, arguments) || this;
             _this.provider = format_1.ModelCrossLinkRestraint.Provider;
@@ -44,4 +44,3 @@ function crossLinkRestraintFromMmcif(model) {
         return;
     return format_1.ModelCrossLinkRestraint.fromTable(ihm_cross_link_restraint, model);
 }
-//# sourceMappingURL=cross-link-restraint.js.map

package/lib/commonjs/mol-plugin/behavior/dynamic/custom-props/sequence/sifts-mapping.js

@@ -18,7 +18,7 @@ exports.SIFTSMapping = behavior_1.PluginBehavior.create({
     category: 'custom-props',
     display: { name: 'SIFTS Mapping' },
     ctor: /** @class */ (function (_super) {
-        (0, tslib_1.__extends)(class_1, _super);
+        tslib_1.__extends(class_1, _super);
         function class_1() {
             var _this = _super !== null && _super.apply(this, arguments) || this;
             _this.provider = sifts_mapping_1.SIFTSMapping.Provider;
@@ -67,4 +67,3 @@ function bestDatabaseSequenceMappingLabel(loci) {
         return sifts_mapping_1.SIFTSMapping.getLabel(se);
     }
 }
-//# sourceMappingURL=sifts-mapping.js.map

package/lib/commonjs/mol-plugin/behavior/dynamic/custom-props/structure-info.js

@@ -16,7 +16,7 @@ exports.StructureInfo = behavior_1.PluginBehavior.create({
     category: 'custom-props',
     display: { name: 'Structure Info' },
     ctor: /** @class */ (function (_super) {
-        (0, tslib_1.__extends)(class_1, _super);
+        tslib_1.__extends(class_1, _super);
         function class_1() {
             return _super !== null && _super.apply(this, arguments) || this;
         }
@@ -83,7 +83,7 @@ exports.StructureInfo = behavior_1.PluginBehavior.create({
             }
             if (structure_1.Model.AsymIdOffset.get(model).value === undefined) {
                 var oldOffset = oldModel && structure_1.Model.AsymIdOffset.get(oldModel).value;
-                var value = oldOffset !== null && oldOffset !== void 0 ? oldOffset : (0, tslib_1.__assign)({}, this.asymIdOffset);
+                var value = oldOffset !== null && oldOffset !== void 0 ? oldOffset : tslib_1.__assign({}, this.asymIdOffset);
                 structure_1.Model.AsymIdOffset.set(model, { value: value });
             }
         };
@@ -130,4 +130,3 @@ exports.StructureInfo = behavior_1.PluginBehavior.create({
         return class_1;
     }(behavior_1.PluginBehavior.Handler))
 });
-//# sourceMappingURL=structure-info.js.map

package/lib/commonjs/mol-plugin/behavior/dynamic/custom-props.js

@@ -21,4 +21,3 @@ var sifts_mapping_1 = require("./custom-props/sequence/sifts-mapping");
 Object.defineProperty(exports, "BestDatabaseSequenceMapping", { enumerable: true, get: function () { return sifts_mapping_1.SIFTSMapping; } });
 var cross_link_restraint_1 = require("./custom-props/integrative/cross-link-restraint");
 Object.defineProperty(exports, "CrossLinkRestraint", { enumerable: true, get: function () { return cross_link_restraint_1.CrossLinkRestraint; } });
-//# sourceMappingURL=custom-props.js.map

package/lib/commonjs/mol-plugin/behavior/dynamic/representation.js

@@ -38,13 +38,13 @@ exports.HighlightLoci = behavior_1.PluginBehavior.create({
     name: 'representation-highlight-loci',
     category: 'interaction',
     ctor: /** @class */ (function (_super) {
-        (0, tslib_1.__extends)(class_1, _super);
+        tslib_1.__extends(class_1, _super);
         function class_1() {
             var _this = _super !== null && _super.apply(this, arguments) || this;
-            _this.lociMarkProvider = function (interactionLoci, action, noRender) {
+            _this.lociMarkProvider = function (interactionLoci, action) {
                 if (!_this.ctx.canvas3d || !_this.params.mark)
                     return;
-                _this.ctx.canvas3d.mark(interactionLoci, action, noRender);
+                _this.ctx.canvas3d.mark(interactionLoci, action);
             };
             return _this;
         }
@@ -108,13 +108,13 @@ exports.SelectLoci = behavior_1.PluginBehavior.create({
     name: 'representation-select-loci',
     category: 'interaction',
     ctor: /** @class */ (function (_super) {
-        (0, tslib_1.__extends)(class_2, _super);
+        tslib_1.__extends(class_2, _super);
         function class_2(ctx, params) {
             var _this = _super.call(this, ctx, params) || this;
-            _this.lociMarkProvider = function (reprLoci, action, noRender) {
+            _this.lociMarkProvider = function (reprLoci, action) {
                 if (!_this.ctx.canvas3d || !_this.params.mark)
                     return;
-                _this.ctx.canvas3d.mark({ loci: reprLoci.loci }, action, noRender);
+                _this.ctx.canvas3d.mark({ loci: reprLoci.loci }, action);
             };
             _this.spine = new spine_1.StateTreeSpine.Impl(ctx.state.data.cells);
             return _this;
@@ -262,7 +262,7 @@ exports.FocusLoci = behavior_1.PluginBehavior.create({
     name: 'representation-focus-loci',
     category: 'interaction',
     ctor: /** @class */ (function (_super) {
-        (0, tslib_1.__extends)(class_4, _super);
+        tslib_1.__extends(class_4, _super);
         function class_4() {
             return _super !== null && _super.apply(this, arguments) || this;
         }
@@ -306,4 +306,3 @@ exports.FocusLoci = behavior_1.PluginBehavior.create({
     params: function () { return FocusLociParams; },
     display: { name: 'Representation Focus Loci on Canvas' }
 });
-//# sourceMappingURL=representation.js.map

package/lib/commonjs/mol-plugin/behavior/dynamic/selection/structure-focus-representation.js

@@ -68,7 +68,7 @@ var StructureFocusRepresentationTags;
 })(StructureFocusRepresentationTags = exports.StructureFocusRepresentationTags || (exports.StructureFocusRepresentationTags = {}));
 var TagSet = new Set([StructureFocusRepresentationTags.TargetSel, StructureFocusRepresentationTags.TargetRepr, StructureFocusRepresentationTags.SurrSel, StructureFocusRepresentationTags.SurrRepr, StructureFocusRepresentationTags.SurrNciRepr]);
 var StructureFocusRepresentationBehavior = /** @class */ (function (_super) {
-    (0, tslib_1.__extends)(StructureFocusRepresentationBehavior, _super);
+    tslib_1.__extends(StructureFocusRepresentationBehavior, _super);
     function StructureFocusRepresentationBehavior() {
         var _this = _super !== null && _super.apply(this, arguments) || this;
         _this.currentSource = void 0;
@@ -80,9 +80,9 @@ var StructureFocusRepresentationBehavior = /** @class */ (function (_super) {
         configurable: true
     });
     StructureFocusRepresentationBehavior.prototype.getReprParams = function (reprParams) {
-        return (0, tslib_1.__assign)((0, tslib_1.__assign)({}, reprParams), { type: {
+        return tslib_1.__assign(tslib_1.__assign({}, reprParams), { type: {
                 name: reprParams.type.name,
-                params: (0, tslib_1.__assign)((0, tslib_1.__assign)({}, reprParams.type.params), { ignoreHydrogens: this.params.ignoreHydrogens, ignoreLight: this.params.ignoreLight, material: this.params.material, clip: this.params.clip })
+                params: tslib_1.__assign(tslib_1.__assign({}, reprParams.type.params), { ignoreHydrogens: this.params.ignoreHydrogens, ignoreLight: this.params.ignoreLight, material: this.params.material, clip: this.params.clip })
             } });
     };
     StructureFocusRepresentationBehavior.prototype.ensureShape = function (cell) {
@@ -131,20 +131,20 @@ var StructureFocusRepresentationBehavior = /** @class */ (function (_super) {
         var bundle = structure_1.StructureElement.Bundle.Empty;
         for (var _i = 0, foci_1 = foci; _i < foci_1.length; _i++) {
             var f = foci_1[_i];
-            update.to(f).update(transforms_1.StateTransforms.Model.StructureSelectionFromBundle, function (old) { return ((0, tslib_1.__assign)((0, tslib_1.__assign)({}, old), { bundle: bundle })); });
+            update.to(f).update(transforms_1.StateTransforms.Model.StructureSelectionFromBundle, function (old) { return (tslib_1.__assign(tslib_1.__assign({}, old), { bundle: bundle })); });
         }
         var expression = builder_1.MolScriptBuilder.struct.generator.empty();
         for (var _a = 0, surrs_1 = surrs; _a < surrs_1.length; _a++) {
             var s = surrs_1[_a];
-            update.to(s).update(transforms_1.StateTransforms.Model.StructureSelectionFromExpression, function (old) { return ((0, tslib_1.__assign)((0, tslib_1.__assign)({}, old), { expression: expression })); });
+            update.to(s).update(transforms_1.StateTransforms.Model.StructureSelectionFromExpression, function (old) { return (tslib_1.__assign(tslib_1.__assign({}, old), { expression: expression })); });
         }
         return commands_1.PluginCommands.State.Update(this.plugin, { state: state, tree: update, options: { doNotLogTiming: true, doNotUpdateCurrent: true } });
     };
     StructureFocusRepresentationBehavior.prototype.focus = function (sourceLoci) {
-        return (0, tslib_1.__awaiter)(this, void 0, void 0, function () {
+        return tslib_1.__awaiter(this, void 0, void 0, function () {
             var parent, loci, residueLoci, residueBundle, target, surroundings, _a, state, builder, refs;
             var _this = this;
-            return (0, tslib_1.__generator)(this, function (_b) {
+            return tslib_1.__generator(this, function (_b) {
                 switch (_b.label) {
                     case 0:
                         parent = this.plugin.helpers.substructureParent.get(sourceLoci.structure);
@@ -167,8 +167,8 @@ var StructureFocusRepresentationBehavior = /** @class */ (function (_super) {
                             });
                         }
                         _a = this.ensureShape(parent), state = _a.state, builder = _a.builder, refs = _a.refs;
-                        builder.to(refs[StructureFocusRepresentationTags.TargetSel]).update(transforms_1.StateTransforms.Model.StructureSelectionFromBundle, function (old) { return ((0, tslib_1.__assign)((0, tslib_1.__assign)({}, old), { bundle: residueBundle })); });
-                        builder.to(refs[StructureFocusRepresentationTags.SurrSel]).update(transforms_1.StateTransforms.Model.StructureSelectionFromExpression, function (old) { return ((0, tslib_1.__assign)((0, tslib_1.__assign)({}, old), { expression: surroundings, label: _this.surrLabel })); });
+                        builder.to(refs[StructureFocusRepresentationTags.TargetSel]).update(transforms_1.StateTransforms.Model.StructureSelectionFromBundle, function (old) { return (tslib_1.__assign(tslib_1.__assign({}, old), { bundle: residueBundle })); });
+                        builder.to(refs[StructureFocusRepresentationTags.SurrSel]).update(transforms_1.StateTransforms.Model.StructureSelectionFromExpression, function (old) { return (tslib_1.__assign(tslib_1.__assign({}, old), { expression: surroundings, label: _this.surrLabel })); });
                         return [4 /*yield*/, commands_1.PluginCommands.State.Update(this.plugin, { state: state, tree: builder, options: { doNotLogTiming: true, doNotUpdateCurrent: true } })];
                     case 1:
                         _b.sent();
@@ -187,9 +187,9 @@ var StructureFocusRepresentationBehavior = /** @class */ (function (_super) {
         });
     };
     StructureFocusRepresentationBehavior.prototype.update = function (params) {
-        return (0, tslib_1.__awaiter)(this, void 0, void 0, function () {
+        return tslib_1.__awaiter(this, void 0, void 0, function () {
             var old, state, builder, all, components, hasComponent, _i, _a, repr, _b, _c, repr, _d, _e, repr;
-            return (0, tslib_1.__generator)(this, function (_f) {
+            return tslib_1.__generator(this, function (_f) {
                 switch (_f.label) {
                     case 0:
                         old = this.params;
@@ -251,4 +251,3 @@ exports.StructureFocusRepresentation = behavior_1.PluginBehavior.create({
     ctor: StructureFocusRepresentationBehavior,
     params: function (_, plugin) { return StructureFocusRepresentationParams(plugin); }
 });
-//# sourceMappingURL=structure-focus-representation.js.map

package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/behavior.js

@@ -26,7 +26,7 @@ var loci_1 = require("../../../../mol-model/loci");
 var assets_1 = require("../../../../mol-util/assets");
 var global_transform_1 = require("../../../../mol-model/structure/model/properties/global-transform");
 var VolumeStreaming = /** @class */ (function (_super) {
-    (0, tslib_1.__extends)(VolumeStreaming, _super);
+    tslib_1.__extends(VolumeStreaming, _super);
     function VolumeStreaming() {
         return _super !== null && _super.apply(this, arguments) || this;
     }
@@ -107,7 +107,7 @@ exports.VolumeStreaming = VolumeStreaming;
     VolumeStreaming.ViewTypeOptions = [['off', 'Off'], ['box', 'Bounded Box'], ['selection-box', 'Around Focus'], ['cell', 'Whole Structure'], ['auto', 'Auto']];
     VolumeStreaming.ChannelTypeOptions = [['em', 'em'], ['2fo-fc', '2fo-fc'], ['fo-fc(+ve)', 'fo-fc(+ve)'], ['fo-fc(-ve)', 'fo-fc(-ve)']];
     var Behavior = /** @class */ (function (_super) {
-        (0, tslib_1.__extends)(Behavior, _super);
+        tslib_1.__extends(Behavior, _super);
         function Behavior(plugin, data) {
             var _this = _super.call(this, plugin, {}) || this;
             _this.plugin = plugin;
@@ -130,9 +130,9 @@ exports.VolumeStreaming = VolumeStreaming;
             configurable: true
         });
         Behavior.prototype.queryData = function (box) {
-            return (0, tslib_1.__awaiter)(this, void 0, void 0, function () {
+            return tslib_1.__awaiter(this, void 0, void 0, function () {
                 var url, a, b, detail, entry, urlAsset, asset, data, removed;
-                return (0, tslib_1.__generator)(this, function (_a) {
+                return tslib_1.__generator(this, function (_a) {
                     switch (_a.label) {
                         case 0:
                             url = (0, url_1.urlCombine)(this.data.serverUrl, "".concat(this.info.kind, "/").concat(this.info.dataId.toLowerCase()));
@@ -171,9 +171,9 @@ exports.VolumeStreaming = VolumeStreaming;
             });
         };
         Behavior.prototype.parseCif = function (data) {
-            return (0, tslib_1.__awaiter)(this, void 0, void 0, function () {
+            return tslib_1.__awaiter(this, void 0, void 0, function () {
                 var parsed, ret, i, block, densityServerCif, volume;
-                return (0, tslib_1.__generator)(this, function (_a) {
+                return tslib_1.__generator(this, function (_a) {
                     switch (_a.label) {
                         case 0: return [4 /*yield*/, this.plugin.runTask(cif_1.CIF.parseBinary(data))];
                         case 1:
@@ -210,9 +210,9 @@ exports.VolumeStreaming = VolumeStreaming;
             if (this.params.entry.params.view.name !== 'selection-box')
                 return;
             var state = this.plugin.state.data;
-            var newParams = (0, tslib_1.__assign)((0, tslib_1.__assign)({}, this.params), { entry: {
+            var newParams = tslib_1.__assign(tslib_1.__assign({}, this.params), { entry: {
                     name: this.params.entry.name,
-                    params: (0, tslib_1.__assign)((0, tslib_1.__assign)({}, this.params.entry.params), { view: {
+                    params: tslib_1.__assign(tslib_1.__assign({}, this.params.entry.params), { view: {
                             name: 'selection-box',
                             params: {
                                 radius: this.params.entry.params.view.params.radius,
@@ -228,9 +228,9 @@ exports.VolumeStreaming = VolumeStreaming;
             if (this.params.entry.params.view.name !== 'auto')
                 return;
             var state = this.plugin.state.data;
-            var newParams = (0, tslib_1.__assign)((0, tslib_1.__assign)({}, this.params), { entry: {
+            var newParams = tslib_1.__assign(tslib_1.__assign({}, this.params), { entry: {
                     name: this.params.entry.name,
-                    params: (0, tslib_1.__assign)((0, tslib_1.__assign)({}, this.params.entry.params), { view: {
+                    params: tslib_1.__assign(tslib_1.__assign({}, this.params.entry.params), { view: {
                             name: 'auto',
                             params: {
                                 radius: this.params.entry.params.view.params.radius,
@@ -338,9 +338,9 @@ exports.VolumeStreaming = VolumeStreaming;
             this.updateSelectionBoxParams(box);
         };
         Behavior.prototype.update = function (params) {
-            return (0, tslib_1.__awaiter)(this, void 0, void 0, function () {
+            return tslib_1.__awaiter(this, void 0, void 0, function () {
                 var switchedToSelection, box, emptyData, r, r, data, _a, info;
-                return (0, tslib_1.__generator)(this, function (_b) {
+                return tslib_1.__generator(this, function (_b) {
                     switch (_b.label) {
                         case 0:
                             switchedToSelection = params.entry.params.view.name === 'selection-box' && this.params && this.params.entry && this.params.entry.params && this.params.entry.params.view && this.params.entry.params.view.name !== 'selection-box';
@@ -433,4 +433,3 @@ exports.VolumeStreaming = VolumeStreaming;
     VolumeStreaming.Behavior = Behavior;
 })(VolumeStreaming = exports.VolumeStreaming || (exports.VolumeStreaming = {}));
 exports.VolumeStreaming = VolumeStreaming;
-//# sourceMappingURL=behavior.js.map

package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/model.d.ts

@@ -9,12 +9,12 @@ import { Volume } from '../../../../mol-model/volume';
 import { Structure } from '../../../../mol-model/structure';
 declare const VolumeServerInfo_base: {
     new (data: VolumeServerInfo.Data, props?: {
-        /** Precision data the server can show. */
-        label: string;
+        label: string; /** Precision data the server can show. */
         description?: string | undefined;
     } | undefined): {
         id: import("../../../../mol-util/uuid").UUID;
         type: PluginStateObject.TypeInfo;
+        /** The value are stored in blockSize^3 cubes */
         label: string;
         description?: string | undefined;
         data: VolumeServerInfo.Data;
@@ -23,6 +23,7 @@ declare const VolumeServerInfo_base: {
     is(obj?: import("../../../../mol-state/object").StateObject<any, import("../../../../mol-state/object").StateObject.Type<any>> | undefined): obj is {
         id: import("../../../../mol-util/uuid").UUID;
         type: PluginStateObject.TypeInfo;
+        /** The value are stored in blockSize^3 cubes */
         label: string;
         description?: string | undefined;
         data: VolumeServerInfo.Data;

package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/model.js

@@ -10,7 +10,7 @@ exports.VolumeServerHeader = exports.VolumeServerInfo = void 0;
 var tslib_1 = require("tslib");
 var objects_1 = require("../../../../mol-plugin-state/objects");
 var VolumeServerInfo = /** @class */ (function (_super) {
-    (0, tslib_1.__extends)(VolumeServerInfo, _super);
+    tslib_1.__extends(VolumeServerInfo, _super);
     function VolumeServerInfo() {
         return _super !== null && _super.apply(this, arguments) || this;
     }
@@ -25,4 +25,3 @@ var VolumeServerHeader;
         ValueType.Int8 = 'int8';
     })(ValueType = VolumeServerHeader.ValueType || (VolumeServerHeader.ValueType = {}));
 })(VolumeServerHeader = exports.VolumeServerHeader || (exports.VolumeServerHeader = {}));
-//# sourceMappingURL=model.js.map

package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/transformers.js

@@ -62,9 +62,9 @@ exports.InitVolumeStreaming = mol_state_1.StateAction.build({
     }
 })(function (_a, plugin) {
     var ref = _a.ref, state = _a.state, params = _a.params;
-    return mol_task_1.Task.create('Volume Streaming', function (taskCtx) { return (0, tslib_1.__awaiter)(void 0, void 0, void 0, function () {
+    return mol_task_1.Task.create('Volume Streaming', function (taskCtx) { return tslib_1.__awaiter(void 0, void 0, void 0, function () {
         var entries, i, il, dataId, emDefaultContourLevel, emdbIds, j, jl, emdbId, contourLevel, e_1, e_2, infoTree, info, children, infoObj, behTree;
-        return (0, tslib_1.__generator)(this, function (_a) {
+        return tslib_1.__generator(this, function (_a) {
             switch (_a.label) {
                 case 0:
                     entries = [];
@@ -171,9 +171,9 @@ exports.BoxifyVolumeStreaming = mol_state_1.StateAction.build({
     var box = geometry_1.Box3D.create(linear_algebra_1.Vec3.clone(params.entry.params.view.params.bottomLeft), linear_algebra_1.Vec3.clone(params.entry.params.view.params.topRight));
     var r = params.entry.params.view.params.radius;
     geometry_1.Box3D.expand(box, box, linear_algebra_1.Vec3.create(r, r, r));
-    var newParams = (0, tslib_1.__assign)((0, tslib_1.__assign)({}, params), { entry: {
+    var newParams = tslib_1.__assign(tslib_1.__assign({}, params), { entry: {
             name: params.entry.name,
-            params: (0, tslib_1.__assign)((0, tslib_1.__assign)({}, params.entry.params), { view: {
+            params: tslib_1.__assign(tslib_1.__assign({}, params.entry.params), { view: {
                     name: 'box',
                     params: {
                         bottomLeft: box.min,
@@ -211,9 +211,9 @@ var CreateVolumeStreamingInfo = objects_1.PluginStateTransform.BuiltIn({
 })({
     apply: function (_a, plugin) {
         var a = _a.a, params = _a.params;
-        return mol_task_1.Task.create('', function (taskCtx) { return (0, tslib_1.__awaiter)(void 0, void 0, void 0, function () {
+        return mol_task_1.Task.create('', function (taskCtx) { return tslib_1.__awaiter(void 0, void 0, void 0, function () {
             var entries, i, il, e, dataId, emDefaultContourLevel, header, data;
-            return (0, tslib_1.__generator)(this, function (_a) {
+            return tslib_1.__generator(this, function (_a) {
                 switch (_a.label) {
                     case 0:
                         entries = [];
@@ -270,9 +270,9 @@ var CreateVolumeStreamingBehavior = objects_1.PluginStateTransform.BuiltIn({
     },
     apply: function (_a, plugin) {
         var a = _a.a, params = _a.params;
-        return mol_task_1.Task.create('Volume streaming', function (_) { return (0, tslib_1.__awaiter)(void 0, void 0, void 0, function () {
+        return mol_task_1.Task.create('Volume streaming', function (_) { return tslib_1.__awaiter(void 0, void 0, void 0, function () {
             var behavior;
-            return (0, tslib_1.__generator)(this, function (_a) {
+            return tslib_1.__generator(this, function (_a) {
                 switch (_a.label) {
                     case 0:
                         behavior = new behavior_1.VolumeStreaming.Behavior(plugin, a.data);
@@ -287,9 +287,9 @@ var CreateVolumeStreamingBehavior = objects_1.PluginStateTransform.BuiltIn({
     update: function (_a) {
         var _this = this;
         var a = _a.a, b = _a.b, oldParams = _a.oldParams, newParams = _a.newParams;
-        return mol_task_1.Task.create('Update Volume Streaming', function (_) { return (0, tslib_1.__awaiter)(_this, void 0, void 0, function () {
+        return mol_task_1.Task.create('Update Volume Streaming', function (_) { return tslib_1.__awaiter(_this, void 0, void 0, function () {
             var emDefaultContourLevel, ret;
-            return (0, tslib_1.__generator)(this, function (_a) {
+            return tslib_1.__generator(this, function (_a) {
                 switch (_a.label) {
                     case 0:
                         if (oldParams.entry.name !== newParams.entry.name) {
@@ -322,10 +322,10 @@ var VolumeStreamingVisual = objects_1.PluginStateTransform.BuiltIn({
 })({
     apply: function (_a, plugin) {
         var a = _a.a, srcParams = _a.params, spine = _a.spine;
-        return mol_task_1.Task.create('Volume Representation', function (ctx) { return (0, tslib_1.__awaiter)(void 0, void 0, void 0, function () {
+        return mol_task_1.Task.create('Volume Representation', function (ctx) { return tslib_1.__awaiter(void 0, void 0, void 0, function () {
             var channel, params, provider, props, repr, structure, transform;
             var _a, _b;
-            return (0, tslib_1.__generator)(this, function (_c) {
+            return tslib_1.__generator(this, function (_c) {
                 switch (_c.label) {
                     case 0:
                         channel = a.data.channels[srcParams.channel];
@@ -334,7 +334,7 @@ var VolumeStreamingVisual = objects_1.PluginStateTransform.BuiltIn({
                         params = createVolumeProps(a.data, srcParams.channel);
                         provider = registry_1.VolumeRepresentationRegistry.BuiltIn.isosurface;
                         props = params.type.params || {};
-                        repr = provider.factory((0, tslib_1.__assign)({ webgl: (_a = plugin.canvas3d) === null || _a === void 0 ? void 0 : _a.webgl }, plugin.representation.volume.themes), provider.getParams);
+                        repr = provider.factory(tslib_1.__assign({ webgl: (_a = plugin.canvas3d) === null || _a === void 0 ? void 0 : _a.webgl }, plugin.representation.volume.themes), provider.getParams);
                         repr.setTheme(theme_1.Theme.create(plugin.representation.volume.themes, { volume: channel.data }, params));
                         structure = (_b = spine.getAncestorOfType(objects_1.PluginStateObject.Molecule.Structure)) === null || _b === void 0 ? void 0 : _b.data;
                         transform = (structure === null || structure === void 0 ? void 0 : structure.models.length) === 0 ? void 0 : global_transform_1.GlobalModelTransformInfo.get(structure === null || structure === void 0 ? void 0 : structure.models[0]);
@@ -350,9 +350,9 @@ var VolumeStreamingVisual = objects_1.PluginStateTransform.BuiltIn({
     },
     update: function (_a, plugin) {
         var a = _a.a, b = _a.b, newParams = _a.newParams, spine = _a.spine;
-        return mol_task_1.Task.create('Volume Representation', function (ctx) { return (0, tslib_1.__awaiter)(void 0, void 0, void 0, function () {
+        return mol_task_1.Task.create('Volume Representation', function (ctx) { return tslib_1.__awaiter(void 0, void 0, void 0, function () {
             var channel, visible, params, props;
-            return (0, tslib_1.__generator)(this, function (_a) {
+            return tslib_1.__generator(this, function (_a) {
                 switch (_a.label) {
                     case 0:
                         channel = a.data.channels[newParams.channel];
@@ -361,7 +361,7 @@ var VolumeStreamingVisual = objects_1.PluginStateTransform.BuiltIn({
                             return [2 /*return*/, mol_state_1.StateTransformer.UpdateResult.Unchanged];
                         visible = b.data.repr.state.visible;
                         params = createVolumeProps(a.data, newParams.channel);
-                        props = (0, tslib_1.__assign)((0, tslib_1.__assign)({}, b.data.repr.props), params.type.params);
+                        props = tslib_1.__assign(tslib_1.__assign({}, b.data.repr.props), params.type.params);
                         b.data.repr.setTheme(theme_1.Theme.create(plugin.representation.volume.themes, { volume: channel.data }, params));
                         return [4 /*yield*/, b.data.repr.createOrUpdate(props, channel.data).runInContext(ctx)];
                     case 1:
@@ -384,4 +384,3 @@ function createVolumeProps(streaming, channelName) {
     var channel = streaming.channels[channelName];
     return representation_1.VolumeRepresentation3DHelpers.getDefaultParamsStatic(streaming.plugin, 'isosurface', { isoValue: channel.isoValue, alpha: channel.opacity, visuals: channel.wireframe ? ['wireframe'] : ['solid'] }, 'uniform', { value: channel.color });
 }
-//# sourceMappingURL=transformers.js.map