npm - molstar - Versions diffs - 3.0.0-dev.3 → 3.0.0-dev.4 - Mend

molstar 3.0.0-dev.3 → 3.0.0-dev.4

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (379) hide show

package/lib/mol-repr/structure/registry.d.ts CHANGED Viewed

@@ -14,6 +14,7 @@ export declare namespace StructureRepresentationRegistry {
         cartoon: import("./representation").StructureRepresentationProvider<{
             sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"polymer-trace" | "polymer-gap" | "nucleotide-block" | "nucleotide-ring" | "direction-wedge">;
+            bumpFrequency: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
             includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
@@ -21,11 +22,13 @@ export declare namespace StructureRepresentationRegistry {
             flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             xrayShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
+            bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
             material: import("../../mol-util/param-definition").ParamDefinition.Group<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
                 metalness: number;
                 roughness: number;
+                bumpiness: number;
             }>>;
             radialSegments: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             detail: import("../../mol-util/param-definition").ParamDefinition.Numeric;
@@ -38,6 +41,7 @@ export declare namespace StructureRepresentationRegistry {
         backbone: import("./representation").StructureRepresentationProvider<{
             sizeAspectRatio: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"polymer-gap" | "polymer-backbone-cylinder" | "polymer-backbone-sphere">;
+            bumpFrequency: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             radialSegments: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
@@ -47,11 +51,13 @@ export declare namespace StructureRepresentationRegistry {
             flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             xrayShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
+            bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
             material: import("../../mol-util/param-definition").ParamDefinition.Group<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
                 metalness: number;
                 roughness: number;
+                bumpiness: number;
             }>>;
             tryUseImpostor: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             detail: import("../../mol-util/param-definition").ParamDefinition.Numeric;
@@ -62,6 +68,7 @@ export declare namespace StructureRepresentationRegistry {
             sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             sizeAspectRatio: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"element-sphere" | "intra-bond" | "inter-bond">;
+            bumpFrequency: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             tryUseImpostor: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             adjustCylinderLength: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             includeTypes: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
@@ -83,11 +90,13 @@ export declare namespace StructureRepresentationRegistry {
             doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             xrayShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
+            bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
             material: import("../../mol-util/param-definition").ParamDefinition.Group<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
                 metalness: number;
                 roughness: number;
+                bumpiness: number;
             }>>;
             flipSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
@@ -96,6 +105,7 @@ export declare namespace StructureRepresentationRegistry {
         }, "ball-and-stick">;
         carbohydrate: import("./representation").StructureRepresentationProvider<{
             visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"carbohydrate-symbol" | "carbohydrate-link" | "carbohydrate-terminal-link">;
+            bumpFrequency: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             terminalLinkSizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             linkScale: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             linkSpacing: import("../../mol-util/param-definition").ParamDefinition.Numeric;
@@ -115,11 +125,13 @@ export declare namespace StructureRepresentationRegistry {
             flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             xrayShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
+            bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
             material: import("../../mol-util/param-definition").ParamDefinition.Group<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
                 metalness: number;
                 roughness: number;
+                bumpiness: number;
             }>>;
             linkSizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             detail: import("../../mol-util/param-definition").ParamDefinition.Numeric;
@@ -133,6 +145,7 @@ export declare namespace StructureRepresentationRegistry {
             sizeAspectRatio: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             linkCap: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"intra-bond" | "inter-bond" | "ellipsoid-mesh">;
+            bumpFrequency: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             tryUseImpostor: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             includeTypes: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
             excludeTypes: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
@@ -152,11 +165,13 @@ export declare namespace StructureRepresentationRegistry {
             doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             xrayShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
+            bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
             material: import("../../mol-util/param-definition").ParamDefinition.Group<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
                 metalness: number;
                 roughness: number;
+                bumpiness: number;
             }>>;
             flipSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
@@ -164,6 +179,7 @@ export declare namespace StructureRepresentationRegistry {
         }, "ellipsoid">;
         'gaussian-surface': import("./representation").StructureRepresentationProvider<{
             visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"gaussian-surface-mesh" | "structure-gaussian-surface-mesh" | "gaussian-surface-wireframe">;
+            bumpFrequency: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             lineSizeAttenuation: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             ignoreHydrogens: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
@@ -178,6 +194,7 @@ export declare namespace StructureRepresentationRegistry {
             material: import("../../mol-util/param-definition").ParamDefinition.Group<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
                 metalness: number;
                 roughness: number;
+                bumpiness: number;
             }>>;
             tryUseGpu: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             smoothColors: import("../../mol-util/param-definition").ParamDefinition.Mapped<import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "auto"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
@@ -189,6 +206,7 @@ export declare namespace StructureRepresentationRegistry {
             flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             xrayShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
+            bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
         }, "gaussian-surface">;
         'gaussian-volume': import("./representation").StructureRepresentationProvider<{
             visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"gaussian-volume" | "units-gaussian-volume">;
@@ -227,6 +245,7 @@ export declare namespace StructureRepresentationRegistry {
             material: import("../../mol-util/param-definition").ParamDefinition.Group<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
                 metalness: number;
                 roughness: number;
+                bumpiness: number;
             }>>;
         }, "gaussian-volume">;
         label: import("./representation").StructureRepresentationProvider<{
@@ -235,6 +254,7 @@ export declare namespace StructureRepresentationRegistry {
             backgroundMargin: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             backgroundColor: import("../../mol-util/param-definition").ParamDefinition.Color;
             backgroundOpacity: import("../../mol-util/param-definition").ParamDefinition.Numeric;
+            borderWidth: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             level: import("../../mol-util/param-definition").ParamDefinition.Select<"element" | "residue" | "chain">;
             chainScale: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             residueScale: import("../../mol-util/param-definition").ParamDefinition.Numeric;
@@ -242,7 +262,6 @@ export declare namespace StructureRepresentationRegistry {
             unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
             includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
-            borderWidth: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             borderColor: import("../../mol-util/param-definition").ParamDefinition.Color;
             offsetX: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             offsetY: import("../../mol-util/param-definition").ParamDefinition.Numeric;
@@ -261,6 +280,7 @@ export declare namespace StructureRepresentationRegistry {
             material: import("../../mol-util/param-definition").ParamDefinition.Group<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
                 metalness: number;
                 roughness: number;
+                bumpiness: number;
             }>>;
         }, "label">;
         line: import("./representation").StructureRepresentationProvider<{
@@ -279,6 +299,7 @@ export declare namespace StructureRepresentationRegistry {
             material: import("../../mol-util/param-definition").ParamDefinition.Group<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
                 metalness: number;
                 roughness: number;
+                bumpiness: number;
             }>>;
             pointSizeAttenuation: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             pointStyle: import("../../mol-util/param-definition").ParamDefinition.Select<"circle" | "square" | "fuzzy">;
@@ -292,6 +313,7 @@ export declare namespace StructureRepresentationRegistry {
         }, "line">;
         'molecular-surface': import("./representation").StructureRepresentationProvider<{
             visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"molecular-surface-mesh" | "molecular-surface-wireframe">;
+            bumpFrequency: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             ignoreHydrogens: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             traceOnly: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
@@ -306,6 +328,7 @@ export declare namespace StructureRepresentationRegistry {
             material: import("../../mol-util/param-definition").ParamDefinition.Group<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
                 metalness: number;
                 roughness: number;
+                bumpiness: number;
             }>>;
             smoothColors: import("../../mol-util/param-definition").ParamDefinition.Mapped<import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "auto"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
                 resolutionFactor: number;
@@ -316,9 +339,11 @@ export declare namespace StructureRepresentationRegistry {
             flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             xrayShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
+            bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
         }, "molecular-surface">;
         orientation: import("./representation").StructureRepresentationProvider<{
             visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"orientation-ellipsoid-mesh">;
+            bumpFrequency: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             detail: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
@@ -328,11 +353,13 @@ export declare namespace StructureRepresentationRegistry {
             flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             xrayShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
+            bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
             material: import("../../mol-util/param-definition").ParamDefinition.Group<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
                 metalness: number;
                 roughness: number;
+                bumpiness: number;
             }>>;
         }, "orientation">;
         point: import("./representation").StructureRepresentationProvider<{
@@ -348,11 +375,13 @@ export declare namespace StructureRepresentationRegistry {
             material: import("../../mol-util/param-definition").ParamDefinition.Group<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
                 metalness: number;
                 roughness: number;
+                bumpiness: number;
             }>>;
         }, "point">;
         putty: import("./representation").StructureRepresentationProvider<{
             sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"polymer-gap" | "polymer-tube">;
+            bumpFrequency: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             radialSegments: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
             includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
@@ -361,16 +390,19 @@ export declare namespace StructureRepresentationRegistry {
             flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             xrayShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
+            bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
             material: import("../../mol-util/param-definition").ParamDefinition.Group<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
                 metalness: number;
                 roughness: number;
+                bumpiness: number;
             }>>;
             detail: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             linearSegments: import("../../mol-util/param-definition").ParamDefinition.Numeric;
         }, "putty">;
         spacefill: import("./representation").StructureRepresentationProvider<{
+            bumpFrequency: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             detail: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             ignoreHydrogens: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
@@ -381,11 +413,13 @@ export declare namespace StructureRepresentationRegistry {
             doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             xrayShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
+            bumpAmplitude: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
             quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
             material: import("../../mol-util/param-definition").ParamDefinition.Group<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
                 metalness: number;
                 roughness: number;
+                bumpiness: number;
             }>>;
             flipSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
             flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;

package/lib/mol-repr/structure/representation/backbone.d.ts CHANGED Viewed

@@ -11,6 +11,7 @@ import { Structure } from '../../../mol-model/structure';
 export declare const BackboneParams: {
     sizeAspectRatio: PD.Numeric;
     visuals: PD.MultiSelect<"polymer-gap" | "polymer-backbone-cylinder" | "polymer-backbone-sphere">;
+    bumpFrequency: PD.Numeric;
     sizeFactor: PD.Numeric;
     radialSegments: PD.Numeric;
     unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
@@ -20,11 +21,13 @@ export declare const BackboneParams: {
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.BooleanParam;
+    bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
     quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
     material: PD.Group<PD.Normalize<{
         metalness: number;
         roughness: number;
+        bumpiness: number;
     }>>;
     tryUseImpostor: PD.BooleanParam;
     detail: PD.Numeric;
@@ -33,6 +36,7 @@ export declare type BackboneParams = typeof BackboneParams;
 export declare function getBackboneParams(ctx: ThemeRegistryContext, structure: Structure): {
     sizeAspectRatio: PD.Numeric;
     visuals: PD.MultiSelect<"polymer-gap" | "polymer-backbone-cylinder" | "polymer-backbone-sphere">;
+    bumpFrequency: PD.Numeric;
     sizeFactor: PD.Numeric;
     radialSegments: PD.Numeric;
     unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
@@ -42,11 +46,13 @@ export declare function getBackboneParams(ctx: ThemeRegistryContext, structure:
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.BooleanParam;
+    bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
     quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
     material: PD.Group<PD.Normalize<{
         metalness: number;
         roughness: number;
+        bumpiness: number;
     }>>;
     tryUseImpostor: PD.BooleanParam;
     detail: PD.Numeric;
@@ -56,6 +62,7 @@ export declare function BackboneRepresentation(ctx: RepresentationContext, getPa
 export declare const BackboneRepresentationProvider: StructureRepresentationProvider<{
     sizeAspectRatio: PD.Numeric;
     visuals: PD.MultiSelect<"polymer-gap" | "polymer-backbone-cylinder" | "polymer-backbone-sphere">;
+    bumpFrequency: PD.Numeric;
     sizeFactor: PD.Numeric;
     radialSegments: PD.Numeric;
     unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
@@ -65,11 +72,13 @@ export declare const BackboneRepresentationProvider: StructureRepresentationProv
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.BooleanParam;
+    bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
     quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
     material: PD.Group<PD.Normalize<{
         metalness: number;
         roughness: number;
+        bumpiness: number;
     }>>;
     tryUseImpostor: PD.BooleanParam;
     detail: PD.Numeric;

package/lib/mol-repr/structure/representation/backbone.js CHANGED Viewed

@@ -11,12 +11,13 @@ import { StructureRepresentationProvider, StructureRepresentationStateBuilder }
 import { Representation } from '../../../mol-repr/representation';
 import { PolymerBackboneSphereParams, PolymerBackboneSphereVisual } from '../visual/polymer-backbone-sphere';
 import { PolymerGapParams, PolymerGapVisual } from '../visual/polymer-gap-cylinder';
+import { BaseGeometry } from '../../../mol-geo/geometry/base';
 var BackboneVisuals = {
     'polymer-backbone-cylinder': function (ctx, getParams) { return UnitsRepresentation('Polymer backbone cylinder', ctx, getParams, PolymerBackboneCylinderVisual); },
     'polymer-backbone-sphere': function (ctx, getParams) { return UnitsRepresentation('Polymer backbone sphere', ctx, getParams, PolymerBackboneSphereVisual); },
     'polymer-gap': function (ctx, getParams) { return UnitsRepresentation('Polymer gap cylinder', ctx, getParams, PolymerGapVisual); },
 };
-export var BackboneParams = __assign(__assign(__assign(__assign({}, PolymerBackboneSphereParams), PolymerBackboneCylinderParams), PolymerGapParams), { sizeAspectRatio: PD.Numeric(1, { min: 0.1, max: 3, step: 0.1 }), visuals: PD.MultiSelect(['polymer-backbone-cylinder', 'polymer-backbone-sphere', 'polymer-gap'], PD.objectToOptions(BackboneVisuals)) });
+export var BackboneParams = __assign(__assign(__assign(__assign({}, PolymerBackboneSphereParams), PolymerBackboneCylinderParams), PolymerGapParams), { sizeAspectRatio: PD.Numeric(1, { min: 0.1, max: 3, step: 0.1 }), visuals: PD.MultiSelect(['polymer-backbone-cylinder', 'polymer-backbone-sphere', 'polymer-gap'], PD.objectToOptions(BackboneVisuals)), bumpFrequency: PD.Numeric(0, { min: 0, max: 10, step: 0.1 }, BaseGeometry.ShadingCategory) });
 export function getBackboneParams(ctx, structure) {
     var params = PD.clone(BackboneParams);
     var hasGaps = false;

package/lib/mol-repr/structure/representation/ball-and-stick.d.ts CHANGED Viewed

@@ -14,6 +14,7 @@ export declare const BallAndStickParams: {
     sizeFactor: PD.Numeric;
     sizeAspectRatio: PD.Numeric;
     visuals: PD.MultiSelect<"element-sphere" | "intra-bond" | "inter-bond">;
+    bumpFrequency: PD.Numeric;
     tryUseImpostor: PD.BooleanParam;
     adjustCylinderLength: PD.BooleanParam;
     includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
@@ -35,11 +36,13 @@ export declare const BallAndStickParams: {
     doubleSided: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.BooleanParam;
+    bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
     quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
     material: PD.Group<PD.Normalize<{
         metalness: number;
         roughness: number;
+        bumpiness: number;
     }>>;
     flipSided: PD.BooleanParam;
     flatShaded: PD.BooleanParam;
@@ -53,6 +56,7 @@ export declare function getBallAndStickParams(ctx: ThemeRegistryContext, structu
     sizeFactor: PD.Numeric;
     sizeAspectRatio: PD.Numeric;
     visuals: PD.MultiSelect<"element-sphere" | "intra-bond" | "inter-bond">;
+    bumpFrequency: PD.Numeric;
     tryUseImpostor: PD.BooleanParam;
     adjustCylinderLength: PD.BooleanParam;
     includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
@@ -74,11 +78,13 @@ export declare function getBallAndStickParams(ctx: ThemeRegistryContext, structu
     doubleSided: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.BooleanParam;
+    bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
     quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
     material: PD.Group<PD.Normalize<{
         metalness: number;
         roughness: number;
+        bumpiness: number;
     }>>;
     flipSided: PD.BooleanParam;
     flatShaded: PD.BooleanParam;
@@ -93,6 +99,7 @@ export declare const BallAndStickRepresentationProvider: StructureRepresentation
     sizeFactor: PD.Numeric;
     sizeAspectRatio: PD.Numeric;
     visuals: PD.MultiSelect<"element-sphere" | "intra-bond" | "inter-bond">;
+    bumpFrequency: PD.Numeric;
     tryUseImpostor: PD.BooleanParam;
     adjustCylinderLength: PD.BooleanParam;
     includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
@@ -114,11 +121,13 @@ export declare const BallAndStickRepresentationProvider: StructureRepresentation
     doubleSided: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.BooleanParam;
+    bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
     quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
     material: PD.Group<PD.Normalize<{
         metalness: number;
         roughness: number;
+        bumpiness: number;
     }>>;
     flipSided: PD.BooleanParam;
     flatShaded: PD.BooleanParam;

package/lib/mol-repr/structure/representation/ball-and-stick.js CHANGED Viewed

@@ -13,12 +13,13 @@ import { ComplexRepresentation } from '../complex-representation';
 import { StructureRepresentationProvider, StructureRepresentationStateBuilder } from '../representation';
 import { Representation } from '../../../mol-repr/representation';
 import { getUnitKindsParam } from '../params';
+import { BaseGeometry } from '../../../mol-geo/geometry/base';
 var BallAndStickVisuals = {
     'element-sphere': function (ctx, getParams) { return UnitsRepresentation('Element sphere', ctx, getParams, ElementSphereVisual); },
     'intra-bond': function (ctx, getParams) { return UnitsRepresentation('Intra-unit bond cylinder', ctx, getParams, IntraUnitBondCylinderVisual); },
     'inter-bond': function (ctx, getParams) { return ComplexRepresentation('Inter-unit bond cylinder', ctx, getParams, InterUnitBondCylinderVisual); },
 };
-export var BallAndStickParams = __assign(__assign(__assign(__assign(__assign({}, ElementSphereParams), { traceOnly: PD.Boolean(false, { isHidden: true }) }), IntraUnitBondCylinderParams), InterUnitBondCylinderParams), { includeParent: PD.Boolean(false), unitKinds: getUnitKindsParam(['atomic']), sizeFactor: PD.Numeric(0.15, { min: 0.01, max: 10, step: 0.01 }), sizeAspectRatio: PD.Numeric(2 / 3, { min: 0.01, max: 3, step: 0.01 }), visuals: PD.MultiSelect(['element-sphere', 'intra-bond', 'inter-bond'], PD.objectToOptions(BallAndStickVisuals)) });
+export var BallAndStickParams = __assign(__assign(__assign(__assign(__assign({}, ElementSphereParams), { traceOnly: PD.Boolean(false, { isHidden: true }) }), IntraUnitBondCylinderParams), InterUnitBondCylinderParams), { includeParent: PD.Boolean(false), unitKinds: getUnitKindsParam(['atomic']), sizeFactor: PD.Numeric(0.15, { min: 0.01, max: 10, step: 0.01 }), sizeAspectRatio: PD.Numeric(2 / 3, { min: 0.01, max: 3, step: 0.01 }), visuals: PD.MultiSelect(['element-sphere', 'intra-bond', 'inter-bond'], PD.objectToOptions(BallAndStickVisuals)), bumpFrequency: PD.Numeric(0, { min: 0, max: 10, step: 0.1 }, BaseGeometry.ShadingCategory) });
 export function getBallAndStickParams(ctx, structure) {
     return PD.clone(BallAndStickParams);
 }

package/lib/mol-repr/structure/representation/carbohydrate.d.ts CHANGED Viewed

@@ -10,6 +10,7 @@ import { ParamDefinition as PD } from '../../../mol-util/param-definition';
 import { StructureRepresentation, StructureRepresentationProvider } from '../representation';
 export declare const CarbohydrateParams: {
     visuals: PD.MultiSelect<"carbohydrate-symbol" | "carbohydrate-link" | "carbohydrate-terminal-link">;
+    bumpFrequency: PD.Numeric;
     terminalLinkSizeFactor: PD.Numeric;
     linkScale: PD.Numeric;
     linkSpacing: PD.Numeric;
@@ -29,11 +30,13 @@ export declare const CarbohydrateParams: {
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.BooleanParam;
+    bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
     quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
     material: PD.Group<PD.Normalize<{
         metalness: number;
         roughness: number;
+        bumpiness: number;
     }>>;
     linkSizeFactor: PD.Numeric;
     detail: PD.Numeric;
@@ -42,6 +45,7 @@ export declare const CarbohydrateParams: {
 export declare type CarbohydrateParams = typeof CarbohydrateParams;
 export declare function getCarbohydrateParams(ctx: ThemeRegistryContext, structure: Structure): {
     visuals: PD.MultiSelect<"carbohydrate-symbol" | "carbohydrate-link" | "carbohydrate-terminal-link">;
+    bumpFrequency: PD.Numeric;
     terminalLinkSizeFactor: PD.Numeric;
     linkScale: PD.Numeric;
     linkSpacing: PD.Numeric;
@@ -61,11 +65,13 @@ export declare function getCarbohydrateParams(ctx: ThemeRegistryContext, structu
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.BooleanParam;
+    bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
     quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
     material: PD.Group<PD.Normalize<{
         metalness: number;
         roughness: number;
+        bumpiness: number;
     }>>;
     linkSizeFactor: PD.Numeric;
     detail: PD.Numeric;
@@ -75,6 +81,7 @@ export declare type CarbohydrateRepresentation = StructureRepresentation<Carbohy
 export declare function CarbohydrateRepresentation(ctx: RepresentationContext, getParams: RepresentationParamsGetter<Structure, CarbohydrateParams>): CarbohydrateRepresentation;
 export declare const CarbohydrateRepresentationProvider: StructureRepresentationProvider<{
     visuals: PD.MultiSelect<"carbohydrate-symbol" | "carbohydrate-link" | "carbohydrate-terminal-link">;
+    bumpFrequency: PD.Numeric;
     terminalLinkSizeFactor: PD.Numeric;
     linkScale: PD.Numeric;
     linkSpacing: PD.Numeric;
@@ -94,11 +101,13 @@ export declare const CarbohydrateRepresentationProvider: StructureRepresentation
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.BooleanParam;
+    bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
     quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
     material: PD.Group<PD.Normalize<{
         metalness: number;
         roughness: number;
+        bumpiness: number;
     }>>;
     linkSizeFactor: PD.Numeric;
     detail: PD.Numeric;

package/lib/mol-repr/structure/representation/carbohydrate.js CHANGED Viewed

@@ -4,6 +4,7 @@
  * @author Alexander Rose <alexander.rose@weirdbyte.de>
  */
 import { __assign } from "tslib";
+import { BaseGeometry } from '../../../mol-geo/geometry/base';
 import { Model } from '../../../mol-model/structure';
 import { Representation } from '../../../mol-repr/representation';
 import { ParamDefinition as PD } from '../../../mol-util/param-definition';
@@ -17,7 +18,7 @@ var CarbohydrateVisuals = {
     'carbohydrate-link': function (ctx, getParams) { return ComplexRepresentation('Carbohydrate link cylinder', ctx, getParams, CarbohydrateLinkVisual); },
     'carbohydrate-terminal-link': function (ctx, getParams) { return ComplexRepresentation('Carbohydrate terminal link cylinder', ctx, getParams, CarbohydrateTerminalLinkVisual); },
 };
-export var CarbohydrateParams = __assign(__assign(__assign(__assign({}, CarbohydrateSymbolParams), CarbohydrateLinkParams), CarbohydrateTerminalLinkParams), { visuals: PD.MultiSelect(['carbohydrate-symbol', 'carbohydrate-link', 'carbohydrate-terminal-link'], PD.objectToOptions(CarbohydrateVisuals)) });
+export var CarbohydrateParams = __assign(__assign(__assign(__assign({}, CarbohydrateSymbolParams), CarbohydrateLinkParams), CarbohydrateTerminalLinkParams), { visuals: PD.MultiSelect(['carbohydrate-symbol', 'carbohydrate-link', 'carbohydrate-terminal-link'], PD.objectToOptions(CarbohydrateVisuals)), bumpFrequency: PD.Numeric(0, { min: 0, max: 10, step: 0.1 }, BaseGeometry.ShadingCategory) });
 export function getCarbohydrateParams(ctx, structure) {
     return PD.clone(CarbohydrateParams);
 }

package/lib/mol-repr/structure/representation/cartoon.d.ts CHANGED Viewed

@@ -11,6 +11,7 @@ import { StructureRepresentation, StructureRepresentationProvider } from '../rep
 export declare const CartoonParams: {
     sizeFactor: PD.Numeric;
     visuals: PD.MultiSelect<"polymer-trace" | "polymer-gap" | "nucleotide-block" | "nucleotide-ring" | "direction-wedge">;
+    bumpFrequency: PD.Numeric;
     unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
@@ -18,11 +19,13 @@ export declare const CartoonParams: {
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.BooleanParam;
+    bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
     quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
     material: PD.Group<PD.Normalize<{
         metalness: number;
         roughness: number;
+        bumpiness: number;
     }>>;
     radialSegments: PD.Numeric;
     detail: PD.Numeric;
@@ -36,6 +39,7 @@ export declare type CartoonParams = typeof CartoonParams;
 export declare function getCartoonParams(ctx: ThemeRegistryContext, structure: Structure): {
     sizeFactor: PD.Numeric;
     visuals: PD.MultiSelect<"polymer-trace" | "polymer-gap" | "nucleotide-block" | "nucleotide-ring" | "direction-wedge">;
+    bumpFrequency: PD.Numeric;
     unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
@@ -43,11 +47,13 @@ export declare function getCartoonParams(ctx: ThemeRegistryContext, structure: S
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.BooleanParam;
+    bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
     quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
     material: PD.Group<PD.Normalize<{
         metalness: number;
         roughness: number;
+        bumpiness: number;
     }>>;
     radialSegments: PD.Numeric;
     detail: PD.Numeric;
@@ -62,6 +68,7 @@ export declare function CartoonRepresentation(ctx: RepresentationContext, getPar
 export declare const CartoonRepresentationProvider: StructureRepresentationProvider<{
     sizeFactor: PD.Numeric;
     visuals: PD.MultiSelect<"polymer-trace" | "polymer-gap" | "nucleotide-block" | "nucleotide-ring" | "direction-wedge">;
+    bumpFrequency: PD.Numeric;
     unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
@@ -69,11 +76,13 @@ export declare const CartoonRepresentationProvider: StructureRepresentationProvi
     flatShaded: PD.BooleanParam;
     ignoreLight: PD.BooleanParam;
     xrayShaded: PD.BooleanParam;
+    bumpAmplitude: PD.Numeric;
     alpha: PD.Numeric;
     quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
     material: PD.Group<PD.Normalize<{
         metalness: number;
         roughness: number;
+        bumpiness: number;
     }>>;
     radialSegments: PD.Numeric;
     detail: PD.Numeric;

package/lib/mol-repr/structure/representation/cartoon.js CHANGED Viewed

@@ -16,6 +16,7 @@ import { PolymerGapParams, PolymerGapVisual } from '../visual/polymer-gap-cylind
 import { PolymerTraceParams, PolymerTraceVisual } from '../visual/polymer-trace-mesh';
 import { SecondaryStructureProvider } from '../../../mol-model-props/computed/secondary-structure';
 import { HelixOrientationProvider } from '../../../mol-model-props/computed/helix-orientation';
+import { BaseGeometry } from '../../../mol-geo/geometry/base';
 var CartoonVisuals = {
     'polymer-trace': function (ctx, getParams) { return UnitsRepresentation('Polymer trace mesh', ctx, getParams, PolymerTraceVisual); },
     'polymer-gap': function (ctx, getParams) { return UnitsRepresentation('Polymer gap cylinder', ctx, getParams, PolymerGapVisual); },
@@ -23,7 +24,7 @@ var CartoonVisuals = {
     'nucleotide-ring': function (ctx, getParams) { return UnitsRepresentation('Nucleotide ring mesh', ctx, getParams, NucleotideRingVisual); },
     'direction-wedge': function (ctx, getParams) { return UnitsRepresentation('Polymer direction wedge', ctx, getParams, PolymerDirectionVisual); }
 };
-export var CartoonParams = __assign(__assign(__assign(__assign(__assign(__assign({}, PolymerTraceParams), PolymerGapParams), NucleotideBlockParams), NucleotideRingParams), PolymerDirectionParams), { sizeFactor: PD.Numeric(0.2, { min: 0, max: 10, step: 0.01 }), visuals: PD.MultiSelect(['polymer-trace', 'polymer-gap', 'nucleotide-block'], PD.objectToOptions(CartoonVisuals)) });
+export var CartoonParams = __assign(__assign(__assign(__assign(__assign(__assign({}, PolymerTraceParams), PolymerGapParams), NucleotideBlockParams), NucleotideRingParams), PolymerDirectionParams), { sizeFactor: PD.Numeric(0.2, { min: 0, max: 10, step: 0.01 }), visuals: PD.MultiSelect(['polymer-trace', 'polymer-gap', 'nucleotide-block'], PD.objectToOptions(CartoonVisuals)), bumpFrequency: PD.Numeric(2, { min: 0, max: 10, step: 0.1 }, BaseGeometry.ShadingCategory) });
 export function getCartoonParams(ctx, structure) {
     var params = PD.clone(CartoonParams);
     var hasNucleotides = false;