molstar 3.0.0-dev.3 → 3.0.0-dev.4
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/LICENSE +20 -20
- package/README.md +187 -187
- package/build/viewer/embedded.html +43 -43
- package/build/viewer/index.html +95 -94
- package/build/viewer/molstar.css +1 -1
- package/build/viewer/molstar.js +1 -1
- package/lib/apps/docking-viewer/index.html +36 -36
- package/lib/apps/docking-viewer/viewport.js +2 -1
- package/lib/apps/viewer/embedded.html +43 -43
- package/lib/apps/viewer/index.html +95 -94
- package/lib/commonjs/apps/docking-viewer/viewport.js +2 -1
- package/lib/commonjs/examples/lighting/index.js +2 -1
- package/lib/commonjs/extensions/anvil/behavior.d.ts +3 -0
- package/lib/commonjs/extensions/anvil/representation.d.ts +13 -0
- package/lib/commonjs/extensions/cellpack/representation.d.ts +3 -0
- package/lib/commonjs/extensions/dnatco/confal-pyramids/representation.d.ts +9 -0
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.d.ts +3 -0
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.d.ts +3 -0
- package/lib/commonjs/extensions/rcsb/validation-report/representation.d.ts +15 -0
- package/lib/commonjs/mol-canvas3d/canvas3d.d.ts +6 -0
- package/lib/commonjs/mol-canvas3d/helper/camera-helper.d.ts +3 -0
- package/lib/commonjs/mol-canvas3d/helper/handle-helper.d.ts +3 -0
- package/lib/commonjs/mol-canvas3d/helper/helper.d.ts +4 -0
- package/lib/commonjs/mol-canvas3d/passes/image.d.ts +3 -0
- package/lib/commonjs/mol-canvas3d/passes/postprocessing.d.ts +1 -0
- package/lib/commonjs/mol-canvas3d/passes/postprocessing.js +4 -2
- package/lib/commonjs/mol-geo/geometry/base.d.ts +2 -0
- package/lib/commonjs/mol-geo/geometry/base.js +2 -0
- package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.d.ts +4 -1
- package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.js +4 -2
- package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.d.ts +1 -0
- package/lib/commonjs/mol-geo/geometry/image/image.d.ts +1 -0
- package/lib/commonjs/mol-geo/geometry/lines/lines.d.ts +1 -0
- package/lib/commonjs/mol-geo/geometry/mesh/color-smoothing.js +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/mesh.d.ts +3 -0
- package/lib/commonjs/mol-geo/geometry/mesh/mesh.js +4 -2
- package/lib/commonjs/mol-geo/geometry/points/points.d.ts +2 -1
- package/lib/commonjs/mol-geo/geometry/spheres/spheres.d.ts +3 -0
- package/lib/commonjs/mol-geo/geometry/spheres/spheres.js +4 -2
- package/lib/commonjs/mol-geo/geometry/substance-data.js +3 -3
- package/lib/commonjs/mol-geo/geometry/text/text.d.ts +1 -0
- package/lib/commonjs/mol-geo/geometry/texture-mesh/color-smoothing.js +3 -3
- package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +3 -0
- package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js +4 -2
- package/lib/commonjs/mol-gl/renderable/cylinders.d.ts +31 -28
- package/lib/commonjs/mol-gl/renderable/cylinders.js +2 -2
- package/lib/commonjs/mol-gl/renderable/direct-volume.d.ts +1 -0
- package/lib/commonjs/mol-gl/renderable/image.d.ts +1 -0
- package/lib/commonjs/mol-gl/renderable/lines.d.ts +1 -0
- package/lib/commonjs/mol-gl/renderable/mesh.d.ts +28 -25
- package/lib/commonjs/mol-gl/renderable/mesh.js +2 -2
- package/lib/commonjs/mol-gl/renderable/points.d.ts +1 -0
- package/lib/commonjs/mol-gl/renderable/schema.d.ts +1 -0
- package/lib/commonjs/mol-gl/renderable/schema.js +3 -3
- package/lib/commonjs/mol-gl/renderable/spheres.d.ts +31 -28
- package/lib/commonjs/mol-gl/renderable/spheres.js +2 -2
- package/lib/commonjs/mol-gl/renderable/text.d.ts +1 -0
- package/lib/commonjs/mol-gl/renderable/texture-mesh.d.ts +3 -0
- package/lib/commonjs/mol-gl/renderable/texture-mesh.js +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/apply-light-color.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/apply-light-color.glsl.js +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-color-varying.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-color-varying.glsl.js +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.js +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/color-frag-params.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/color-frag-params.glsl.js +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.js +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/common-frag-params.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/common-frag-params.glsl.js +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/common.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/common.glsl.js +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/light-frag-params.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/light-frag-params.glsl.js +1 -1
- package/lib/commonjs/mol-gl/shader/cylinders.frag.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/cylinders.frag.js +1 -1
- package/lib/commonjs/mol-gl/shader/mesh.frag.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/mesh.frag.js +1 -1
- package/lib/commonjs/mol-gl/shader/postprocessing.frag.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/postprocessing.frag.js +1 -1
- package/lib/commonjs/mol-gl/shader/spheres.frag.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/spheres.frag.js +1 -1
- package/lib/commonjs/mol-model/structure/model/model.js +7 -3
- package/lib/commonjs/mol-model-formats/shape/ply.d.ts +6 -0
- package/lib/commonjs/mol-model-props/computed/representations/interactions-inter-unit-cylinder.d.ts +3 -0
- package/lib/commonjs/mol-model-props/computed/representations/interactions-intra-unit-cylinder.d.ts +3 -0
- package/lib/commonjs/mol-model-props/computed/representations/interactions.d.ts +9 -0
- package/lib/commonjs/mol-model-props/integrative/cross-link-restraint/representation.d.ts +12 -0
- package/lib/commonjs/mol-plugin/behavior/dynamic/selection/structure-focus-representation.d.ts +1 -0
- package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/model.d.ts +2 -3
- package/lib/commonjs/mol-plugin/commands.d.ts +3 -0
- package/lib/commonjs/mol-plugin/config.d.ts +1 -0
- package/lib/commonjs/mol-plugin/config.js +9 -3
- package/lib/commonjs/mol-plugin/util/viewport-screenshot.d.ts +9 -0
- package/lib/commonjs/mol-plugin-state/manager/structure/component.d.ts +2 -0
- package/lib/commonjs/mol-plugin-state/transforms/representation.d.ts +22 -0
- package/lib/commonjs/mol-plugin-ui/controls/parameters.d.ts +3 -2
- package/lib/commonjs/mol-plugin-ui/controls/parameters.js +11 -6
- package/lib/commonjs/mol-plugin-ui/hooks/use-behavior.d.ts +1 -1
- package/lib/commonjs/mol-plugin-ui/hooks/use-behavior.js +8 -17
- package/lib/commonjs/mol-plugin-ui/plugin.d.ts +1 -1
- package/lib/commonjs/mol-plugin-ui/plugin.js +76 -10
- package/lib/commonjs/mol-repr/shape/loci/angle.d.ts +3 -0
- package/lib/commonjs/mol-repr/shape/loci/common.d.ts +1 -0
- package/lib/commonjs/mol-repr/shape/loci/dihedral.d.ts +3 -0
- package/lib/commonjs/mol-repr/shape/loci/distance.d.ts +1 -0
- package/lib/commonjs/mol-repr/shape/loci/label.d.ts +1 -0
- package/lib/commonjs/mol-repr/shape/loci/orientation.d.ts +3 -0
- package/lib/commonjs/mol-repr/shape/loci/plane.d.ts +3 -0
- package/lib/commonjs/mol-repr/shape/model/unitcell.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/complex-visual.d.ts +12 -0
- package/lib/commonjs/mol-repr/structure/params.d.ts +16 -0
- package/lib/commonjs/mol-repr/structure/registry.d.ts +35 -1
- package/lib/commonjs/mol-repr/structure/representation/backbone.d.ts +9 -0
- package/lib/commonjs/mol-repr/structure/representation/backbone.js +2 -1
- package/lib/commonjs/mol-repr/structure/representation/ball-and-stick.d.ts +9 -0
- package/lib/commonjs/mol-repr/structure/representation/ball-and-stick.js +2 -1
- package/lib/commonjs/mol-repr/structure/representation/carbohydrate.d.ts +9 -0
- package/lib/commonjs/mol-repr/structure/representation/carbohydrate.js +2 -1
- package/lib/commonjs/mol-repr/structure/representation/cartoon.d.ts +9 -0
- package/lib/commonjs/mol-repr/structure/representation/cartoon.js +2 -1
- package/lib/commonjs/mol-repr/structure/representation/ellipsoid.d.ts +9 -0
- package/lib/commonjs/mol-repr/structure/representation/ellipsoid.js +2 -1
- package/lib/commonjs/mol-repr/structure/representation/gaussian-surface.d.ts +9 -0
- package/lib/commonjs/mol-repr/structure/representation/gaussian-surface.js +2 -1
- package/lib/commonjs/mol-repr/structure/representation/gaussian-volume.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/representation/label.d.ts +6 -3
- package/lib/commonjs/mol-repr/structure/representation/line.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/representation/molecular-surface.d.ts +9 -0
- package/lib/commonjs/mol-repr/structure/representation/molecular-surface.js +2 -1
- package/lib/commonjs/mol-repr/structure/representation/orientation.d.ts +9 -0
- package/lib/commonjs/mol-repr/structure/representation/orientation.js +2 -1
- package/lib/commonjs/mol-repr/structure/representation/point.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/representation/putty.d.ts +9 -0
- package/lib/commonjs/mol-repr/structure/representation/putty.js +2 -1
- package/lib/commonjs/mol-repr/structure/representation/spacefill.d.ts +9 -0
- package/lib/commonjs/mol-repr/structure/representation/spacefill.js +2 -1
- package/lib/commonjs/mol-repr/structure/units-visual.d.ts +16 -0
- package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-cylinder.d.ts +6 -0
- package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-line.d.ts +1 -0
- package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-cylinder.d.ts +6 -0
- package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-line.d.ts +1 -0
- package/lib/commonjs/mol-repr/structure/visual/carbohydrate-link-cylinder.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/visual/carbohydrate-symbol-mesh.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/visual/carbohydrate-terminal-link-cylinder.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/visual/element-cross.d.ts +1 -0
- package/lib/commonjs/mol-repr/structure/visual/element-point.d.ts +1 -0
- package/lib/commonjs/mol-repr/structure/visual/element-sphere.d.ts +6 -0
- package/lib/commonjs/mol-repr/structure/visual/ellipsoid-mesh.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/visual/gaussian-density-volume.d.ts +2 -0
- package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-mesh.d.ts +12 -0
- package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-wireframe.d.ts +1 -0
- package/lib/commonjs/mol-repr/structure/visual/label-text.d.ts +3 -2
- package/lib/commonjs/mol-repr/structure/visual/label-text.js +2 -2
- package/lib/commonjs/mol-repr/structure/visual/molecular-surface-mesh.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/visual/molecular-surface-wireframe.d.ts +1 -0
- package/lib/commonjs/mol-repr/structure/visual/nucleotide-block-mesh.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/visual/nucleotide-ring-mesh.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/visual/orientation-ellipsoid-mesh.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/visual/polymer-backbone-cylinder.d.ts +6 -0
- package/lib/commonjs/mol-repr/structure/visual/polymer-backbone-sphere.d.ts +6 -0
- package/lib/commonjs/mol-repr/structure/visual/polymer-direction-wedge.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/visual/polymer-gap-cylinder.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/visual/polymer-trace-mesh.d.ts +3 -0
- package/lib/commonjs/mol-repr/structure/visual/polymer-tube-mesh.d.ts +3 -0
- package/lib/commonjs/mol-repr/volume/direct-volume.d.ts +3 -0
- package/lib/commonjs/mol-repr/volume/isosurface.d.ts +16 -0
- package/lib/commonjs/mol-repr/volume/isosurface.js +2 -1
- package/lib/commonjs/mol-repr/volume/registry.d.ts +5 -0
- package/lib/commonjs/mol-repr/volume/representation.d.ts +1 -0
- package/lib/commonjs/mol-repr/volume/slice.d.ts +3 -0
- package/lib/commonjs/mol-script/language/builder.d.ts +1 -0
- package/lib/commonjs/mol-theme/color/illustrative.d.ts +2 -0
- package/lib/commonjs/mol-theme/color/illustrative.js +2 -2
- package/lib/commonjs/mol-theme/color.d.ts +1 -0
- package/lib/commonjs/mol-util/material.d.ts +5 -1
- package/lib/commonjs/mol-util/material.js +9 -7
- package/lib/examples/alpha-orbitals/index.html +60 -60
- package/lib/examples/basic-wrapper/index.html +136 -136
- package/lib/examples/lighting/index.html +86 -86
- package/lib/examples/lighting/index.js +2 -1
- package/lib/examples/proteopedia-wrapper/index.html +235 -235
- package/lib/extensions/anvil/behavior.d.ts +3 -0
- package/lib/extensions/anvil/representation.d.ts +13 -0
- package/lib/extensions/cellpack/representation.d.ts +3 -0
- package/lib/extensions/dnatco/confal-pyramids/representation.d.ts +9 -0
- package/lib/extensions/rcsb/assembly-symmetry/behavior.d.ts +3 -0
- package/lib/extensions/rcsb/assembly-symmetry/representation.d.ts +3 -0
- package/lib/extensions/rcsb/validation-report/representation.d.ts +15 -0
- package/lib/mol-canvas3d/canvas3d.d.ts +6 -0
- package/lib/mol-canvas3d/helper/camera-helper.d.ts +3 -0
- package/lib/mol-canvas3d/helper/handle-helper.d.ts +3 -0
- package/lib/mol-canvas3d/helper/helper.d.ts +4 -0
- package/lib/mol-canvas3d/passes/image.d.ts +3 -0
- package/lib/mol-canvas3d/passes/postprocessing.d.ts +1 -0
- package/lib/mol-canvas3d/passes/postprocessing.js +4 -2
- package/lib/mol-geo/geometry/base.d.ts +2 -0
- package/lib/mol-geo/geometry/base.js +2 -0
- package/lib/mol-geo/geometry/cylinders/cylinders.d.ts +4 -1
- package/lib/mol-geo/geometry/cylinders/cylinders.js +4 -2
- package/lib/mol-geo/geometry/direct-volume/direct-volume.d.ts +1 -0
- package/lib/mol-geo/geometry/image/image.d.ts +1 -0
- package/lib/mol-geo/geometry/lines/lines.d.ts +1 -0
- package/lib/mol-geo/geometry/mesh/color-smoothing.js +1 -1
- package/lib/mol-geo/geometry/mesh/mesh.d.ts +3 -0
- package/lib/mol-geo/geometry/mesh/mesh.js +4 -2
- package/lib/mol-geo/geometry/points/points.d.ts +2 -1
- package/lib/mol-geo/geometry/spheres/spheres.d.ts +3 -0
- package/lib/mol-geo/geometry/spheres/spheres.js +4 -2
- package/lib/mol-geo/geometry/substance-data.js +3 -3
- package/lib/mol-geo/geometry/text/text.d.ts +1 -0
- package/lib/mol-geo/geometry/texture-mesh/color-smoothing.js +3 -3
- package/lib/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +3 -0
- package/lib/mol-geo/geometry/texture-mesh/texture-mesh.js +4 -2
- package/lib/mol-gl/renderable/cylinders.d.ts +31 -28
- package/lib/mol-gl/renderable/cylinders.js +3 -3
- package/lib/mol-gl/renderable/direct-volume.d.ts +1 -0
- package/lib/mol-gl/renderable/image.d.ts +1 -0
- package/lib/mol-gl/renderable/lines.d.ts +1 -0
- package/lib/mol-gl/renderable/mesh.d.ts +28 -25
- package/lib/mol-gl/renderable/mesh.js +3 -3
- package/lib/mol-gl/renderable/points.d.ts +1 -0
- package/lib/mol-gl/renderable/schema.d.ts +1 -0
- package/lib/mol-gl/renderable/schema.js +3 -3
- package/lib/mol-gl/renderable/spheres.d.ts +31 -28
- package/lib/mol-gl/renderable/spheres.js +3 -3
- package/lib/mol-gl/renderable/text.d.ts +1 -0
- package/lib/mol-gl/renderable/texture-mesh.d.ts +3 -0
- package/lib/mol-gl/renderable/texture-mesh.js +1 -1
- package/lib/mol-gl/shader/chunks/apply-light-color.glsl.d.ts +1 -1
- package/lib/mol-gl/shader/chunks/apply-light-color.glsl.js +1 -1
- package/lib/mol-gl/shader/chunks/assign-color-varying.glsl.d.ts +1 -1
- package/lib/mol-gl/shader/chunks/assign-color-varying.glsl.js +1 -1
- package/lib/mol-gl/shader/chunks/assign-material-color.glsl.d.ts +1 -1
- package/lib/mol-gl/shader/chunks/assign-material-color.glsl.js +1 -1
- package/lib/mol-gl/shader/chunks/color-frag-params.glsl.d.ts +1 -1
- package/lib/mol-gl/shader/chunks/color-frag-params.glsl.js +1 -1
- package/lib/mol-gl/shader/chunks/color-vert-params.glsl.d.ts +1 -1
- package/lib/mol-gl/shader/chunks/color-vert-params.glsl.js +1 -1
- package/lib/mol-gl/shader/chunks/common-frag-params.glsl.d.ts +1 -1
- package/lib/mol-gl/shader/chunks/common-frag-params.glsl.js +1 -1
- package/lib/mol-gl/shader/chunks/common.glsl.d.ts +1 -1
- package/lib/mol-gl/shader/chunks/common.glsl.js +1 -1
- package/lib/mol-gl/shader/chunks/light-frag-params.glsl.d.ts +1 -1
- package/lib/mol-gl/shader/chunks/light-frag-params.glsl.js +1 -1
- package/lib/mol-gl/shader/cylinders.frag.d.ts +1 -1
- package/lib/mol-gl/shader/cylinders.frag.js +1 -1
- package/lib/mol-gl/shader/mesh.frag.d.ts +1 -1
- package/lib/mol-gl/shader/mesh.frag.js +1 -1
- package/lib/mol-gl/shader/postprocessing.frag.d.ts +1 -1
- package/lib/mol-gl/shader/postprocessing.frag.js +1 -1
- package/lib/mol-gl/shader/spheres.frag.d.ts +1 -1
- package/lib/mol-gl/shader/spheres.frag.js +1 -1
- package/lib/mol-model/structure/model/model.js +7 -3
- package/lib/mol-model-formats/shape/ply.d.ts +6 -0
- package/lib/mol-model-props/computed/representations/interactions-inter-unit-cylinder.d.ts +3 -0
- package/lib/mol-model-props/computed/representations/interactions-intra-unit-cylinder.d.ts +3 -0
- package/lib/mol-model-props/computed/representations/interactions.d.ts +9 -0
- package/lib/mol-model-props/integrative/cross-link-restraint/representation.d.ts +12 -0
- package/lib/mol-plugin/behavior/dynamic/selection/structure-focus-representation.d.ts +1 -0
- package/lib/mol-plugin/behavior/dynamic/volume-streaming/model.d.ts +2 -3
- package/lib/mol-plugin/commands.d.ts +3 -0
- package/lib/mol-plugin/config.d.ts +1 -0
- package/lib/mol-plugin/config.js +8 -3
- package/lib/mol-plugin/util/viewport-screenshot.d.ts +9 -0
- package/lib/mol-plugin/version.js +2 -2
- package/lib/mol-plugin-state/manager/structure/component.d.ts +2 -0
- package/lib/mol-plugin-state/transforms/representation.d.ts +22 -0
- package/lib/mol-plugin-ui/controls/parameters.d.ts +3 -2
- package/lib/mol-plugin-ui/controls/parameters.js +12 -7
- package/lib/mol-plugin-ui/hooks/use-behavior.d.ts +1 -1
- package/lib/mol-plugin-ui/hooks/use-behavior.js +9 -18
- package/lib/mol-plugin-ui/plugin.d.ts +1 -1
- package/lib/mol-plugin-ui/plugin.js +76 -10
- package/lib/mol-plugin-ui/skin/base/base.scss +32 -32
- package/lib/mol-plugin-ui/skin/base/components/controls-base.scss +333 -333
- package/lib/mol-plugin-ui/skin/base/components/controls.scss +418 -418
- package/lib/mol-plugin-ui/skin/base/components/help.scss +27 -27
- package/lib/mol-plugin-ui/skin/base/components/line-graph.scss +67 -67
- package/lib/mol-plugin-ui/skin/base/components/log.scss +100 -100
- package/lib/mol-plugin-ui/skin/base/components/misc.scss +643 -616
- package/lib/mol-plugin-ui/skin/base/components/sequence.scss +125 -125
- package/lib/mol-plugin-ui/skin/base/components/slider.scss +165 -165
- package/lib/mol-plugin-ui/skin/base/components/tasks.scss +99 -99
- package/lib/mol-plugin-ui/skin/base/components/toast.scss +83 -83
- package/lib/mol-plugin-ui/skin/base/components/transformer.scss +163 -163
- package/lib/mol-plugin-ui/skin/base/components/viewport.scss +127 -127
- package/lib/mol-plugin-ui/skin/base/layout/common.scss +71 -71
- package/lib/mol-plugin-ui/skin/base/layout/controls-landscape.scss +89 -89
- package/lib/mol-plugin-ui/skin/base/layout/controls-outside.scss +98 -98
- package/lib/mol-plugin-ui/skin/base/layout/controls-portrait.scss +108 -108
- package/lib/mol-plugin-ui/skin/base/layout.scss +40 -40
- package/lib/mol-plugin-ui/skin/base/logo.scss +12 -12
- package/lib/mol-plugin-ui/skin/base/normalize.scss +209 -209
- package/lib/mol-plugin-ui/skin/base/ui.scss +40 -40
- package/lib/mol-plugin-ui/skin/base/variables.scss +85 -85
- package/lib/mol-plugin-ui/skin/blue.scss +1 -1
- package/lib/mol-plugin-ui/skin/colors/blue.scss +23 -23
- package/lib/mol-plugin-ui/skin/colors/dark.scss +23 -23
- package/lib/mol-plugin-ui/skin/colors/light.scss +29 -29
- package/lib/mol-plugin-ui/skin/dark.scss +1 -1
- package/lib/mol-plugin-ui/skin/light.scss +1 -1
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- package/lib/mol-repr/shape/loci/common.d.ts +1 -0
- package/lib/mol-repr/shape/loci/dihedral.d.ts +3 -0
- package/lib/mol-repr/shape/loci/distance.d.ts +1 -0
- package/lib/mol-repr/shape/loci/label.d.ts +1 -0
- package/lib/mol-repr/shape/loci/orientation.d.ts +3 -0
- package/lib/mol-repr/shape/loci/plane.d.ts +3 -0
- package/lib/mol-repr/shape/model/unitcell.d.ts +3 -0
- package/lib/mol-repr/structure/complex-visual.d.ts +12 -0
- package/lib/mol-repr/structure/params.d.ts +16 -0
- package/lib/mol-repr/structure/registry.d.ts +35 -1
- package/lib/mol-repr/structure/representation/backbone.d.ts +9 -0
- package/lib/mol-repr/structure/representation/backbone.js +2 -1
- package/lib/mol-repr/structure/representation/ball-and-stick.d.ts +9 -0
- package/lib/mol-repr/structure/representation/ball-and-stick.js +2 -1
- package/lib/mol-repr/structure/representation/carbohydrate.d.ts +9 -0
- package/lib/mol-repr/structure/representation/carbohydrate.js +2 -1
- package/lib/mol-repr/structure/representation/cartoon.d.ts +9 -0
- package/lib/mol-repr/structure/representation/cartoon.js +2 -1
- package/lib/mol-repr/structure/representation/ellipsoid.d.ts +9 -0
- package/lib/mol-repr/structure/representation/ellipsoid.js +2 -1
- package/lib/mol-repr/structure/representation/gaussian-surface.d.ts +9 -0
- package/lib/mol-repr/structure/representation/gaussian-surface.js +2 -1
- package/lib/mol-repr/structure/representation/gaussian-volume.d.ts +3 -0
- package/lib/mol-repr/structure/representation/label.d.ts +6 -3
- package/lib/mol-repr/structure/representation/line.d.ts +3 -0
- package/lib/mol-repr/structure/representation/molecular-surface.d.ts +9 -0
- package/lib/mol-repr/structure/representation/molecular-surface.js +2 -1
- package/lib/mol-repr/structure/representation/orientation.d.ts +9 -0
- package/lib/mol-repr/structure/representation/orientation.js +2 -1
- package/lib/mol-repr/structure/representation/point.d.ts +3 -0
- package/lib/mol-repr/structure/representation/putty.d.ts +9 -0
- package/lib/mol-repr/structure/representation/putty.js +2 -1
- package/lib/mol-repr/structure/representation/spacefill.d.ts +9 -0
- package/lib/mol-repr/structure/representation/spacefill.js +2 -1
- package/lib/mol-repr/structure/units-visual.d.ts +16 -0
- package/lib/mol-repr/structure/visual/bond-inter-unit-cylinder.d.ts +6 -0
- package/lib/mol-repr/structure/visual/bond-inter-unit-line.d.ts +1 -0
- package/lib/mol-repr/structure/visual/bond-intra-unit-cylinder.d.ts +6 -0
- package/lib/mol-repr/structure/visual/bond-intra-unit-line.d.ts +1 -0
- package/lib/mol-repr/structure/visual/carbohydrate-link-cylinder.d.ts +3 -0
- package/lib/mol-repr/structure/visual/carbohydrate-symbol-mesh.d.ts +3 -0
- package/lib/mol-repr/structure/visual/carbohydrate-terminal-link-cylinder.d.ts +3 -0
- package/lib/mol-repr/structure/visual/element-cross.d.ts +1 -0
- package/lib/mol-repr/structure/visual/element-point.d.ts +1 -0
- package/lib/mol-repr/structure/visual/element-sphere.d.ts +6 -0
- package/lib/mol-repr/structure/visual/ellipsoid-mesh.d.ts +3 -0
- package/lib/mol-repr/structure/visual/gaussian-density-volume.d.ts +2 -0
- package/lib/mol-repr/structure/visual/gaussian-surface-mesh.d.ts +12 -0
- package/lib/mol-repr/structure/visual/gaussian-surface-wireframe.d.ts +1 -0
- package/lib/mol-repr/structure/visual/label-text.d.ts +3 -2
- package/lib/mol-repr/structure/visual/label-text.js +2 -2
- package/lib/mol-repr/structure/visual/molecular-surface-mesh.d.ts +3 -0
- package/lib/mol-repr/structure/visual/molecular-surface-wireframe.d.ts +1 -0
- package/lib/mol-repr/structure/visual/nucleotide-block-mesh.d.ts +3 -0
- package/lib/mol-repr/structure/visual/nucleotide-ring-mesh.d.ts +3 -0
- package/lib/mol-repr/structure/visual/orientation-ellipsoid-mesh.d.ts +3 -0
- package/lib/mol-repr/structure/visual/polymer-backbone-cylinder.d.ts +6 -0
- package/lib/mol-repr/structure/visual/polymer-backbone-sphere.d.ts +6 -0
- package/lib/mol-repr/structure/visual/polymer-direction-wedge.d.ts +3 -0
- package/lib/mol-repr/structure/visual/polymer-gap-cylinder.d.ts +3 -0
- package/lib/mol-repr/structure/visual/polymer-trace-mesh.d.ts +3 -0
- package/lib/mol-repr/structure/visual/polymer-tube-mesh.d.ts +3 -0
- package/lib/mol-repr/volume/direct-volume.d.ts +3 -0
- package/lib/mol-repr/volume/isosurface.d.ts +16 -0
- package/lib/mol-repr/volume/isosurface.js +2 -1
- package/lib/mol-repr/volume/registry.d.ts +5 -0
- package/lib/mol-repr/volume/representation.d.ts +1 -0
- package/lib/mol-repr/volume/slice.d.ts +3 -0
- package/lib/mol-script/language/builder.d.ts +1 -0
- package/lib/mol-theme/color/illustrative.d.ts +2 -0
- package/lib/mol-theme/color/illustrative.js +2 -2
- package/lib/mol-theme/color.d.ts +1 -0
- package/lib/mol-util/material.d.ts +5 -1
- package/lib/mol-util/material.js +9 -7
- package/package.json +162 -160
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right: 0;
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bottom: 0;
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width: 100%;
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text-align: right;
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padding-right: math.div($control-spacing, 2);
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}
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@use "sass:math";
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|
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|
|
4
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.msp-toast-container {
|
|
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position: relative;
|
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6
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// bottom: $control-spacing;
|
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// right: $control-spacing;
|
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// margin-left: $control-spacing;
|
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9
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+
z-index: 1001;
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|
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.msp-toast-entry {
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color: $font-color;
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background: $control-background;
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position: relative;
|
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float: right;
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min-height: $row-height;
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margin-top: $control-spacing;
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border: 1px solid $border-color;
|
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display: table;
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.msp-toast-title {
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height: 100%;
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line-height: $row-height;
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padding: 0 $control-spacing;
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background: $default-background;
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font-weight: bold;
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display: table-cell;
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-webkit-user-select: none; /* Chrome/Safari */
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-moz-user-select: none; /* Firefox */
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31
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-ms-user-select: none; /* IE10+ */
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/* Rules below not implemented in browsers yet */
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-o-user-select: none;
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user-select: none;
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font-weight: light;
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cursor: pointer;
|
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}
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.msp-toast-message {
|
|
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padding: $info-vertical-padding ($control-spacing + $row-height) $info-vertical-padding $control-spacing;
|
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display: table-cell;
|
|
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|
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a {
|
|
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text-decoration: none;
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color: $msp-btn-commit-on-font-color;
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font-weight: bold;
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&:hover {
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text-decoration: underline;
|
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color: $msp-btn-commit-on-hover-font-color;
|
|
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}
|
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|
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&:active, &:focus {
|
|
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|
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color: $msp-btn-commit-on-font-color;
|
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outline-offset: 0;
|
|
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|
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outline: none;
|
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}
|
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|
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}
|
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|
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}
|
|
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|
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64
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.msp-toast-hide {
|
|
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|
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position: absolute;
|
|
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|
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width: $row-height + $control-spacing;
|
|
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|
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right: 0;
|
|
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|
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top: 0;
|
|
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|
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bottom: 0;
|
|
70
|
+
|
|
71
|
+
.msp-btn-icon {
|
|
72
|
+
background: transparent;
|
|
73
|
+
position: absolute;
|
|
74
|
+
top: 1px;
|
|
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|
+
right: 0;
|
|
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|
+
left: 0;
|
|
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|
+
bottom: 0;
|
|
78
|
+
width: 100%;
|
|
79
|
+
text-align: right;
|
|
80
|
+
padding-right: math.div($control-spacing, 2);
|
|
81
|
+
}
|
|
82
|
+
}
|
|
83
|
+
}
|
|
84
84
|
}
|
|
@@ -1,164 +1,164 @@
|
|
|
1
|
-
.msp-transformer {
|
|
2
|
-
|
|
3
|
-
.msp-entity-badge {
|
|
4
|
-
position: absolute;
|
|
5
|
-
top: 0;
|
|
6
|
-
right: 0;
|
|
7
|
-
height: $row-height;
|
|
8
|
-
line-height: $row-height;
|
|
9
|
-
width: $row-height;
|
|
10
|
-
}
|
|
11
|
-
}
|
|
12
|
-
|
|
13
|
-
.msp-layout-right, .msp-layout-left {
|
|
14
|
-
background: $control-background;
|
|
15
|
-
}
|
|
16
|
-
|
|
17
|
-
.msp-transformer-wrapper {
|
|
18
|
-
position: relative;
|
|
19
|
-
}
|
|
20
|
-
|
|
21
|
-
.msp-transformer-wrapper {
|
|
22
|
-
|
|
23
|
-
.msp-entity-badge {
|
|
24
|
-
left: 0;
|
|
25
|
-
top: 0;
|
|
26
|
-
}
|
|
27
|
-
|
|
28
|
-
&:first-child {
|
|
29
|
-
.msp-panel-description-content {
|
|
30
|
-
top: $row-height + 1;
|
|
31
|
-
}
|
|
32
|
-
}
|
|
33
|
-
|
|
34
|
-
&:not(:first-child) {
|
|
35
|
-
.msp-panel-description-content {
|
|
36
|
-
bottom: $row-height + 1;
|
|
37
|
-
}
|
|
38
|
-
}
|
|
39
|
-
}
|
|
40
|
-
|
|
41
|
-
.msp-transform-wrapper {
|
|
42
|
-
margin-bottom: $control-spacing;
|
|
43
|
-
}
|
|
44
|
-
|
|
45
|
-
.msp-transform-wrapper-collapsed {
|
|
46
|
-
margin-bottom: 1px;
|
|
47
|
-
}
|
|
48
|
-
|
|
49
|
-
.msp-transform-update-wrapper {
|
|
50
|
-
margin-bottom: 1px;
|
|
51
|
-
}
|
|
52
|
-
|
|
53
|
-
.msp-transform-update-wrapper-collapsed {
|
|
54
|
-
margin-bottom: 1px;
|
|
55
|
-
}
|
|
56
|
-
|
|
57
|
-
.msp-transform-update-wrapper, .msp-transform-update-wrapper-collapsed {
|
|
58
|
-
> .msp-transform-header > button {
|
|
59
|
-
text-align: left;
|
|
60
|
-
padding-left: $row-height;
|
|
61
|
-
line-height: 24px;
|
|
62
|
-
background: color-lower-contrast($control-background, 4%); // $control-background; // color-lower-contrast($default-background, 4%);
|
|
63
|
-
// font-weight: bold;
|
|
64
|
-
}
|
|
65
|
-
}
|
|
66
|
-
|
|
67
|
-
.msp-transform-wrapper > .msp-transform-header > button {
|
|
68
|
-
text-align: left;
|
|
69
|
-
background: $default-background; // color-lower-contrast($default-background, 4%);
|
|
70
|
-
font-weight: bold;
|
|
71
|
-
padding-right: 5px;
|
|
72
|
-
}
|
|
73
|
-
|
|
74
|
-
.msp-transform-header {
|
|
75
|
-
position: relative;
|
|
76
|
-
// border-top: 1px solid $entity-color-Behaviour; // TODO: separate color
|
|
77
|
-
|
|
78
|
-
// > button {
|
|
79
|
-
// text-align: left;
|
|
80
|
-
// padding-left: $row-height;
|
|
81
|
-
// background: $control-background; // color-lower-contrast($default-background, 4%);
|
|
82
|
-
// font-weight: bold;
|
|
83
|
-
// }
|
|
84
|
-
|
|
85
|
-
> button > small {
|
|
86
|
-
font-weight: normal;
|
|
87
|
-
float: right;
|
|
88
|
-
}
|
|
89
|
-
|
|
90
|
-
> button {
|
|
91
|
-
> span:first-child {
|
|
92
|
-
margin-right: 10px;
|
|
93
|
-
}
|
|
94
|
-
}
|
|
95
|
-
|
|
96
|
-
> button:hover {
|
|
97
|
-
color: color-lower-contrast($font-color, 15%);
|
|
98
|
-
}
|
|
99
|
-
}
|
|
100
|
-
|
|
101
|
-
.msp-transform-header-brand {
|
|
102
|
-
// padding-left: 42px;
|
|
103
|
-
margin-bottom: -1px;
|
|
104
|
-
svg {
|
|
105
|
-
fill: $font-color;
|
|
106
|
-
stroke: $font-color;
|
|
107
|
-
}
|
|
108
|
-
// > div {
|
|
109
|
-
// position: absolute;
|
|
110
|
-
// height: 32px;
|
|
111
|
-
// line-height: 32px;
|
|
112
|
-
// width: 32px;
|
|
113
|
-
// top: 0;
|
|
114
|
-
// left: 0;
|
|
115
|
-
// text-align: center;
|
|
116
|
-
// color: #eceff3;
|
|
117
|
-
// fill: #eceff3;
|
|
118
|
-
// stroke: #eceff3;
|
|
119
|
-
// font-size: 85%;
|
|
120
|
-
// }
|
|
121
|
-
}
|
|
122
|
-
|
|
123
|
-
.msp-transform-default-params {
|
|
124
|
-
background: $default-background;
|
|
125
|
-
position: absolute;
|
|
126
|
-
left: 0;
|
|
127
|
-
top: 0;
|
|
128
|
-
width: $row-height;
|
|
129
|
-
padding: 0;
|
|
130
|
-
}
|
|
131
|
-
|
|
132
|
-
.msp-transform-default-params:hover {
|
|
133
|
-
background: color-lower-contrast($default-background, 20%);
|
|
134
|
-
}
|
|
135
|
-
|
|
136
|
-
.msp-transform-apply-wrap {
|
|
137
|
-
position: relative;
|
|
138
|
-
margin-top: 1px;
|
|
139
|
-
width: 100%;
|
|
140
|
-
height: $row-height;
|
|
141
|
-
}
|
|
142
|
-
|
|
143
|
-
.msp-transform-refresh {
|
|
144
|
-
width: $control-label-width + $control-spacing - $row-height - 1;
|
|
145
|
-
margin-left: $row-height + 1;
|
|
146
|
-
background: $default-background;
|
|
147
|
-
text-align: right;
|
|
148
|
-
}
|
|
149
|
-
|
|
150
|
-
.msp-transform-apply {
|
|
151
|
-
display: block;
|
|
152
|
-
position: absolute;
|
|
153
|
-
left: $control-label-width + $control-spacing;
|
|
154
|
-
right: 0;
|
|
155
|
-
top: 0;
|
|
156
|
-
}
|
|
157
|
-
|
|
158
|
-
.msp-transform-apply-wider {
|
|
159
|
-
margin-left: $row-height + 1px;
|
|
160
|
-
}
|
|
161
|
-
|
|
162
|
-
.msp-data-beh {
|
|
163
|
-
margin: $control-spacing 0 !important;
|
|
1
|
+
.msp-transformer {
|
|
2
|
+
|
|
3
|
+
.msp-entity-badge {
|
|
4
|
+
position: absolute;
|
|
5
|
+
top: 0;
|
|
6
|
+
right: 0;
|
|
7
|
+
height: $row-height;
|
|
8
|
+
line-height: $row-height;
|
|
9
|
+
width: $row-height;
|
|
10
|
+
}
|
|
11
|
+
}
|
|
12
|
+
|
|
13
|
+
.msp-layout-right, .msp-layout-left {
|
|
14
|
+
background: $control-background;
|
|
15
|
+
}
|
|
16
|
+
|
|
17
|
+
.msp-transformer-wrapper {
|
|
18
|
+
position: relative;
|
|
19
|
+
}
|
|
20
|
+
|
|
21
|
+
.msp-transformer-wrapper {
|
|
22
|
+
|
|
23
|
+
.msp-entity-badge {
|
|
24
|
+
left: 0;
|
|
25
|
+
top: 0;
|
|
26
|
+
}
|
|
27
|
+
|
|
28
|
+
&:first-child {
|
|
29
|
+
.msp-panel-description-content {
|
|
30
|
+
top: $row-height + 1;
|
|
31
|
+
}
|
|
32
|
+
}
|
|
33
|
+
|
|
34
|
+
&:not(:first-child) {
|
|
35
|
+
.msp-panel-description-content {
|
|
36
|
+
bottom: $row-height + 1;
|
|
37
|
+
}
|
|
38
|
+
}
|
|
39
|
+
}
|
|
40
|
+
|
|
41
|
+
.msp-transform-wrapper {
|
|
42
|
+
margin-bottom: $control-spacing;
|
|
43
|
+
}
|
|
44
|
+
|
|
45
|
+
.msp-transform-wrapper-collapsed {
|
|
46
|
+
margin-bottom: 1px;
|
|
47
|
+
}
|
|
48
|
+
|
|
49
|
+
.msp-transform-update-wrapper {
|
|
50
|
+
margin-bottom: 1px;
|
|
51
|
+
}
|
|
52
|
+
|
|
53
|
+
.msp-transform-update-wrapper-collapsed {
|
|
54
|
+
margin-bottom: 1px;
|
|
55
|
+
}
|
|
56
|
+
|
|
57
|
+
.msp-transform-update-wrapper, .msp-transform-update-wrapper-collapsed {
|
|
58
|
+
> .msp-transform-header > button {
|
|
59
|
+
text-align: left;
|
|
60
|
+
padding-left: $row-height;
|
|
61
|
+
line-height: 24px;
|
|
62
|
+
background: color-lower-contrast($control-background, 4%); // $control-background; // color-lower-contrast($default-background, 4%);
|
|
63
|
+
// font-weight: bold;
|
|
64
|
+
}
|
|
65
|
+
}
|
|
66
|
+
|
|
67
|
+
.msp-transform-wrapper > .msp-transform-header > button {
|
|
68
|
+
text-align: left;
|
|
69
|
+
background: $default-background; // color-lower-contrast($default-background, 4%);
|
|
70
|
+
font-weight: bold;
|
|
71
|
+
padding-right: 5px;
|
|
72
|
+
}
|
|
73
|
+
|
|
74
|
+
.msp-transform-header {
|
|
75
|
+
position: relative;
|
|
76
|
+
// border-top: 1px solid $entity-color-Behaviour; // TODO: separate color
|
|
77
|
+
|
|
78
|
+
// > button {
|
|
79
|
+
// text-align: left;
|
|
80
|
+
// padding-left: $row-height;
|
|
81
|
+
// background: $control-background; // color-lower-contrast($default-background, 4%);
|
|
82
|
+
// font-weight: bold;
|
|
83
|
+
// }
|
|
84
|
+
|
|
85
|
+
> button > small {
|
|
86
|
+
font-weight: normal;
|
|
87
|
+
float: right;
|
|
88
|
+
}
|
|
89
|
+
|
|
90
|
+
> button {
|
|
91
|
+
> span:first-child {
|
|
92
|
+
margin-right: 10px;
|
|
93
|
+
}
|
|
94
|
+
}
|
|
95
|
+
|
|
96
|
+
> button:hover {
|
|
97
|
+
color: color-lower-contrast($font-color, 15%);
|
|
98
|
+
}
|
|
99
|
+
}
|
|
100
|
+
|
|
101
|
+
.msp-transform-header-brand {
|
|
102
|
+
// padding-left: 42px;
|
|
103
|
+
margin-bottom: -1px;
|
|
104
|
+
svg {
|
|
105
|
+
fill: $font-color;
|
|
106
|
+
stroke: $font-color;
|
|
107
|
+
}
|
|
108
|
+
// > div {
|
|
109
|
+
// position: absolute;
|
|
110
|
+
// height: 32px;
|
|
111
|
+
// line-height: 32px;
|
|
112
|
+
// width: 32px;
|
|
113
|
+
// top: 0;
|
|
114
|
+
// left: 0;
|
|
115
|
+
// text-align: center;
|
|
116
|
+
// color: #eceff3;
|
|
117
|
+
// fill: #eceff3;
|
|
118
|
+
// stroke: #eceff3;
|
|
119
|
+
// font-size: 85%;
|
|
120
|
+
// }
|
|
121
|
+
}
|
|
122
|
+
|
|
123
|
+
.msp-transform-default-params {
|
|
124
|
+
background: $default-background;
|
|
125
|
+
position: absolute;
|
|
126
|
+
left: 0;
|
|
127
|
+
top: 0;
|
|
128
|
+
width: $row-height;
|
|
129
|
+
padding: 0;
|
|
130
|
+
}
|
|
131
|
+
|
|
132
|
+
.msp-transform-default-params:hover {
|
|
133
|
+
background: color-lower-contrast($default-background, 20%);
|
|
134
|
+
}
|
|
135
|
+
|
|
136
|
+
.msp-transform-apply-wrap {
|
|
137
|
+
position: relative;
|
|
138
|
+
margin-top: 1px;
|
|
139
|
+
width: 100%;
|
|
140
|
+
height: $row-height;
|
|
141
|
+
}
|
|
142
|
+
|
|
143
|
+
.msp-transform-refresh {
|
|
144
|
+
width: $control-label-width + $control-spacing - $row-height - 1;
|
|
145
|
+
margin-left: $row-height + 1;
|
|
146
|
+
background: $default-background;
|
|
147
|
+
text-align: right;
|
|
148
|
+
}
|
|
149
|
+
|
|
150
|
+
.msp-transform-apply {
|
|
151
|
+
display: block;
|
|
152
|
+
position: absolute;
|
|
153
|
+
left: $control-label-width + $control-spacing;
|
|
154
|
+
right: 0;
|
|
155
|
+
top: 0;
|
|
156
|
+
}
|
|
157
|
+
|
|
158
|
+
.msp-transform-apply-wider {
|
|
159
|
+
margin-left: $row-height + 1px;
|
|
160
|
+
}
|
|
161
|
+
|
|
162
|
+
.msp-data-beh {
|
|
163
|
+
margin: $control-spacing 0 !important;
|
|
164
164
|
}
|