molstar 2.4.1 → 3.0.0-dev.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (456) hide show
  1. package/build/viewer/molstar.js +1 -1
  2. package/lib/apps/docking-viewer/viewport.js +14 -14
  3. package/lib/apps/docking-viewer/viewport.js.map +1 -1
  4. package/lib/commonjs/apps/docking-viewer/viewport.js +14 -14
  5. package/lib/commonjs/apps/docking-viewer/viewport.js.map +1 -1
  6. package/lib/commonjs/extensions/anvil/behavior.d.ts +1 -0
  7. package/lib/commonjs/extensions/anvil/representation.d.ts +20 -0
  8. package/lib/commonjs/extensions/cellpack/representation.d.ts +4 -0
  9. package/lib/commonjs/extensions/dnatco/confal-pyramids/representation.d.ts +12 -0
  10. package/lib/commonjs/extensions/geo-export/controls.js +15 -17
  11. package/lib/commonjs/extensions/geo-export/controls.js.map +1 -1
  12. package/lib/commonjs/extensions/geo-export/glb-exporter.d.ts +4 -3
  13. package/lib/commonjs/extensions/geo-export/glb-exporter.js +23 -11
  14. package/lib/commonjs/extensions/geo-export/glb-exporter.js.map +1 -1
  15. package/lib/commonjs/extensions/geo-export/usdz-exporter.d.ts +2 -5
  16. package/lib/commonjs/extensions/geo-export/usdz-exporter.js +14 -15
  17. package/lib/commonjs/extensions/geo-export/usdz-exporter.js.map +1 -1
  18. package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.d.ts +3 -2
  19. package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.d.ts +4 -0
  20. package/lib/commonjs/extensions/rcsb/validation-report/representation.d.ts +20 -0
  21. package/lib/commonjs/mol-canvas3d/canvas3d.d.ts +18 -14
  22. package/lib/commonjs/mol-canvas3d/helper/camera-helper.d.ts +1 -0
  23. package/lib/commonjs/mol-canvas3d/helper/handle-helper.d.ts +1 -0
  24. package/lib/commonjs/mol-canvas3d/helper/helper.d.ts +2 -0
  25. package/lib/commonjs/mol-canvas3d/passes/image.d.ts +1 -0
  26. package/lib/commonjs/mol-geo/geometry/base.d.ts +11 -2
  27. package/lib/commonjs/mol-geo/geometry/base.js +14 -4
  28. package/lib/commonjs/mol-geo/geometry/base.js.map +1 -1
  29. package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.d.ts +4 -0
  30. package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.js +3 -1
  31. package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.js.map +1 -1
  32. package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.d.ts +4 -0
  33. package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.js +4 -3
  34. package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.js.map +1 -1
  35. package/lib/commonjs/mol-geo/geometry/image/image.d.ts +4 -0
  36. package/lib/commonjs/mol-geo/geometry/image/image.js +3 -1
  37. package/lib/commonjs/mol-geo/geometry/image/image.js.map +1 -1
  38. package/lib/commonjs/mol-geo/geometry/lines/lines.d.ts +4 -0
  39. package/lib/commonjs/mol-geo/geometry/lines/lines.js +3 -1
  40. package/lib/commonjs/mol-geo/geometry/lines/lines.js.map +1 -1
  41. package/lib/commonjs/mol-geo/geometry/mesh/color-smoothing.d.ts +1 -0
  42. package/lib/commonjs/mol-geo/geometry/mesh/color-smoothing.js +35 -1
  43. package/lib/commonjs/mol-geo/geometry/mesh/color-smoothing.js.map +1 -1
  44. package/lib/commonjs/mol-geo/geometry/mesh/mesh.d.ts +4 -0
  45. package/lib/commonjs/mol-geo/geometry/mesh/mesh.js +3 -1
  46. package/lib/commonjs/mol-geo/geometry/mesh/mesh.js.map +1 -1
  47. package/lib/commonjs/mol-geo/geometry/points/points.d.ts +4 -0
  48. package/lib/commonjs/mol-geo/geometry/points/points.js +3 -1
  49. package/lib/commonjs/mol-geo/geometry/points/points.js.map +1 -1
  50. package/lib/commonjs/mol-geo/geometry/spheres/spheres.d.ts +4 -0
  51. package/lib/commonjs/mol-geo/geometry/spheres/spheres.js +3 -1
  52. package/lib/commonjs/mol-geo/geometry/spheres/spheres.js.map +1 -1
  53. package/lib/commonjs/mol-geo/geometry/substance-data.d.ts +23 -0
  54. package/lib/commonjs/mol-geo/geometry/substance-data.js +68 -0
  55. package/lib/commonjs/mol-geo/geometry/substance-data.js.map +1 -0
  56. package/lib/commonjs/mol-geo/geometry/text/text.d.ts +4 -0
  57. package/lib/commonjs/mol-geo/geometry/text/text.js +3 -1
  58. package/lib/commonjs/mol-geo/geometry/text/text.js.map +1 -1
  59. package/lib/commonjs/mol-geo/geometry/texture-mesh/color-smoothing.d.ts +1 -0
  60. package/lib/commonjs/mol-geo/geometry/texture-mesh/color-smoothing.js +33 -1
  61. package/lib/commonjs/mol-geo/geometry/texture-mesh/color-smoothing.js.map +1 -1
  62. package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +4 -0
  63. package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js +3 -1
  64. package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js.map +1 -1
  65. package/lib/commonjs/mol-gl/_spec/renderer.spec.js +1 -1
  66. package/lib/commonjs/mol-gl/renderable/cylinders.d.ts +10 -0
  67. package/lib/commonjs/mol-gl/renderable/direct-volume.d.ts +10 -0
  68. package/lib/commonjs/mol-gl/renderable/image.d.ts +10 -0
  69. package/lib/commonjs/mol-gl/renderable/lines.d.ts +10 -0
  70. package/lib/commonjs/mol-gl/renderable/mesh.d.ts +10 -0
  71. package/lib/commonjs/mol-gl/renderable/points.d.ts +10 -0
  72. package/lib/commonjs/mol-gl/renderable/points.js +1 -2
  73. package/lib/commonjs/mol-gl/renderable/points.js.map +1 -1
  74. package/lib/commonjs/mol-gl/renderable/schema.d.ts +24 -5
  75. package/lib/commonjs/mol-gl/renderable/schema.js +15 -11
  76. package/lib/commonjs/mol-gl/renderable/schema.js.map +1 -1
  77. package/lib/commonjs/mol-gl/renderable/spheres.d.ts +10 -0
  78. package/lib/commonjs/mol-gl/renderable/text.d.ts +10 -0
  79. package/lib/commonjs/mol-gl/renderable/texture-mesh.d.ts +10 -0
  80. package/lib/commonjs/mol-gl/renderer.d.ts +9 -15
  81. package/lib/commonjs/mol-gl/renderer.js +53 -61
  82. package/lib/commonjs/mol-gl/renderer.js.map +1 -1
  83. package/lib/commonjs/mol-gl/shader/chunks/apply-light-color.glsl.d.ts +3 -3
  84. package/lib/commonjs/mol-gl/shader/chunks/apply-light-color.glsl.js +3 -3
  85. package/lib/commonjs/mol-gl/shader/chunks/apply-light-color.glsl.js.map +1 -1
  86. package/lib/commonjs/mol-gl/shader/chunks/assign-color-varying.glsl.d.ts +1 -1
  87. package/lib/commonjs/mol-gl/shader/chunks/assign-color-varying.glsl.js +1 -1
  88. package/lib/commonjs/mol-gl/shader/chunks/assign-color-varying.glsl.js.map +1 -1
  89. package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.d.ts +1 -1
  90. package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.js +1 -1
  91. package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.js.map +1 -1
  92. package/lib/commonjs/mol-gl/shader/chunks/color-frag-params.glsl.d.ts +1 -1
  93. package/lib/commonjs/mol-gl/shader/chunks/color-frag-params.glsl.js +1 -1
  94. package/lib/commonjs/mol-gl/shader/chunks/color-frag-params.glsl.js.map +1 -1
  95. package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.d.ts +1 -1
  96. package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.js +1 -1
  97. package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.js.map +1 -1
  98. package/lib/commonjs/mol-gl/shader/chunks/common-clip.glsl.d.ts +1 -1
  99. package/lib/commonjs/mol-gl/shader/chunks/common-clip.glsl.js +1 -1
  100. package/lib/commonjs/mol-gl/shader/chunks/common-clip.glsl.js.map +1 -1
  101. package/lib/commonjs/mol-gl/shader/chunks/light-frag-params.glsl.d.ts +3 -3
  102. package/lib/commonjs/mol-gl/shader/chunks/light-frag-params.glsl.js +3 -3
  103. package/lib/commonjs/mol-gl/shader/chunks/light-frag-params.glsl.js.map +1 -1
  104. package/lib/commonjs/mol-gl/shader/direct-volume.frag.d.ts +1 -1
  105. package/lib/commonjs/mol-gl/shader/direct-volume.frag.js +1 -1
  106. package/lib/commonjs/mol-gl/shader/direct-volume.frag.js.map +1 -1
  107. package/lib/commonjs/mol-gl/shader/mesh.frag.d.ts +1 -1
  108. package/lib/commonjs/mol-gl/shader/mesh.frag.js +1 -1
  109. package/lib/commonjs/mol-gl/shader/mesh.frag.js.map +1 -1
  110. package/lib/commonjs/mol-gl/shader-code.d.ts +0 -1
  111. package/lib/commonjs/mol-gl/shader-code.js +31 -13
  112. package/lib/commonjs/mol-gl/shader-code.js.map +1 -1
  113. package/lib/commonjs/mol-gl/webgl/extensions.js +2 -4
  114. package/lib/commonjs/mol-gl/webgl/extensions.js.map +1 -1
  115. package/lib/commonjs/mol-math/linear-algebra/3d/vec3.d.ts +6 -0
  116. package/lib/commonjs/mol-math/linear-algebra/3d/vec3.js +9 -0
  117. package/lib/commonjs/mol-math/linear-algebra/3d/vec3.js.map +1 -1
  118. package/lib/commonjs/mol-model/loci.d.ts +18 -18
  119. package/lib/commonjs/mol-model-formats/shape/ply.d.ts +8 -0
  120. package/lib/commonjs/mol-model-props/computed/representations/interactions-inter-unit-cylinder.d.ts +4 -0
  121. package/lib/commonjs/mol-model-props/computed/representations/interactions-intra-unit-cylinder.d.ts +4 -0
  122. package/lib/commonjs/mol-model-props/computed/representations/interactions.d.ts +12 -0
  123. package/lib/commonjs/mol-model-props/integrative/cross-link-restraint/representation.d.ts +16 -0
  124. package/lib/commonjs/mol-plugin/behavior/dynamic/representation.d.ts +2 -2
  125. package/lib/commonjs/mol-plugin/behavior/dynamic/selection/structure-focus-representation.d.ts +5 -0
  126. package/lib/commonjs/mol-plugin/behavior/dynamic/selection/structure-focus-representation.js +4 -2
  127. package/lib/commonjs/mol-plugin/behavior/dynamic/selection/structure-focus-representation.js.map +1 -1
  128. package/lib/commonjs/mol-plugin/commands.d.ts +9 -7
  129. package/lib/commonjs/mol-plugin/spec.js +1 -0
  130. package/lib/commonjs/mol-plugin/spec.js.map +1 -1
  131. package/lib/commonjs/mol-plugin/util/viewport-screenshot.d.ts +3 -0
  132. package/lib/commonjs/mol-plugin-state/builder/structure/representation-preset.d.ts +4 -4
  133. package/lib/commonjs/mol-plugin-state/helpers/structure-substance.d.ts +13 -0
  134. package/lib/commonjs/mol-plugin-state/helpers/structure-substance.js +126 -0
  135. package/lib/commonjs/mol-plugin-state/helpers/structure-substance.js.map +1 -0
  136. package/lib/commonjs/mol-plugin-state/manager/structure/component.d.ts +9 -2
  137. package/lib/commonjs/mol-plugin-state/manager/structure/component.js +44 -22
  138. package/lib/commonjs/mol-plugin-state/manager/structure/component.js.map +1 -1
  139. package/lib/commonjs/mol-plugin-state/transforms/representation.d.ts +31 -4
  140. package/lib/commonjs/mol-plugin-state/transforms/representation.js +120 -1
  141. package/lib/commonjs/mol-plugin-state/transforms/representation.js.map +1 -1
  142. package/lib/commonjs/mol-plugin-ui/viewport/simple-settings.js +2 -5
  143. package/lib/commonjs/mol-plugin-ui/viewport/simple-settings.js.map +1 -1
  144. package/lib/commonjs/mol-repr/representation.d.ts +3 -0
  145. package/lib/commonjs/mol-repr/representation.js +7 -1
  146. package/lib/commonjs/mol-repr/representation.js.map +1 -1
  147. package/lib/commonjs/mol-repr/shape/loci/angle.d.ts +5 -1
  148. package/lib/commonjs/mol-repr/shape/loci/common.d.ts +5 -1
  149. package/lib/commonjs/mol-repr/shape/loci/dihedral.d.ts +5 -1
  150. package/lib/commonjs/mol-repr/shape/loci/distance.d.ts +5 -1
  151. package/lib/commonjs/mol-repr/shape/loci/label.d.ts +5 -1
  152. package/lib/commonjs/mol-repr/shape/loci/orientation.d.ts +4 -0
  153. package/lib/commonjs/mol-repr/shape/loci/plane.d.ts +4 -0
  154. package/lib/commonjs/mol-repr/shape/model/unitcell.d.ts +4 -0
  155. package/lib/commonjs/mol-repr/shape/representation.js +3 -0
  156. package/lib/commonjs/mol-repr/shape/representation.js.map +1 -1
  157. package/lib/commonjs/mol-repr/structure/complex-representation.js +6 -0
  158. package/lib/commonjs/mol-repr/structure/complex-representation.js.map +1 -1
  159. package/lib/commonjs/mol-repr/structure/complex-visual.d.ts +25 -1
  160. package/lib/commonjs/mol-repr/structure/complex-visual.js +4 -0
  161. package/lib/commonjs/mol-repr/structure/complex-visual.js.map +1 -1
  162. package/lib/commonjs/mol-repr/structure/params.d.ts +33 -1
  163. package/lib/commonjs/mol-repr/structure/registry.d.ts +57 -1
  164. package/lib/commonjs/mol-repr/structure/representation/backbone.d.ts +12 -0
  165. package/lib/commonjs/mol-repr/structure/representation/ball-and-stick.d.ts +12 -0
  166. package/lib/commonjs/mol-repr/structure/representation/carbohydrate.d.ts +12 -0
  167. package/lib/commonjs/mol-repr/structure/representation/cartoon.d.ts +12 -0
  168. package/lib/commonjs/mol-repr/structure/representation/ellipsoid.d.ts +12 -0
  169. package/lib/commonjs/mol-repr/structure/representation/gaussian-surface.d.ts +12 -0
  170. package/lib/commonjs/mol-repr/structure/representation/gaussian-volume.d.ts +12 -0
  171. package/lib/commonjs/mol-repr/structure/representation/label.d.ts +15 -3
  172. package/lib/commonjs/mol-repr/structure/representation/line.d.ts +12 -0
  173. package/lib/commonjs/mol-repr/structure/representation/molecular-surface.d.ts +12 -0
  174. package/lib/commonjs/mol-repr/structure/representation/orientation.d.ts +12 -0
  175. package/lib/commonjs/mol-repr/structure/representation/point.d.ts +12 -0
  176. package/lib/commonjs/mol-repr/structure/representation/putty.d.ts +12 -0
  177. package/lib/commonjs/mol-repr/structure/representation/spacefill.d.ts +12 -0
  178. package/lib/commonjs/mol-repr/structure/units-representation.js +8 -2
  179. package/lib/commonjs/mol-repr/structure/units-representation.js.map +1 -1
  180. package/lib/commonjs/mol-repr/structure/units-visual.d.ts +33 -1
  181. package/lib/commonjs/mol-repr/structure/units-visual.js +4 -0
  182. package/lib/commonjs/mol-repr/structure/units-visual.js.map +1 -1
  183. package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-cylinder.d.ts +8 -0
  184. package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-line.d.ts +4 -0
  185. package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-cylinder.d.ts +8 -0
  186. package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-line.d.ts +4 -0
  187. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-link-cylinder.d.ts +4 -0
  188. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-symbol-mesh.d.ts +4 -0
  189. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-terminal-link-cylinder.d.ts +4 -0
  190. package/lib/commonjs/mol-repr/structure/visual/element-cross.d.ts +4 -0
  191. package/lib/commonjs/mol-repr/structure/visual/element-point.d.ts +4 -0
  192. package/lib/commonjs/mol-repr/structure/visual/element-sphere.d.ts +8 -0
  193. package/lib/commonjs/mol-repr/structure/visual/ellipsoid-mesh.d.ts +4 -0
  194. package/lib/commonjs/mol-repr/structure/visual/gaussian-density-volume.d.ts +8 -0
  195. package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-mesh.d.ts +16 -0
  196. package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-wireframe.d.ts +4 -0
  197. package/lib/commonjs/mol-repr/structure/visual/label-text.d.ts +5 -1
  198. package/lib/commonjs/mol-repr/structure/visual/molecular-surface-mesh.d.ts +4 -0
  199. package/lib/commonjs/mol-repr/structure/visual/molecular-surface-wireframe.d.ts +4 -0
  200. package/lib/commonjs/mol-repr/structure/visual/nucleotide-block-mesh.d.ts +4 -0
  201. package/lib/commonjs/mol-repr/structure/visual/nucleotide-ring-mesh.d.ts +4 -0
  202. package/lib/commonjs/mol-repr/structure/visual/orientation-ellipsoid-mesh.d.ts +4 -0
  203. package/lib/commonjs/mol-repr/structure/visual/polymer-backbone-cylinder.d.ts +8 -0
  204. package/lib/commonjs/mol-repr/structure/visual/polymer-backbone-sphere.d.ts +8 -0
  205. package/lib/commonjs/mol-repr/structure/visual/polymer-direction-wedge.d.ts +4 -0
  206. package/lib/commonjs/mol-repr/structure/visual/polymer-gap-cylinder.d.ts +4 -0
  207. package/lib/commonjs/mol-repr/structure/visual/polymer-trace-mesh.d.ts +4 -0
  208. package/lib/commonjs/mol-repr/structure/visual/polymer-tube-mesh.d.ts +4 -0
  209. package/lib/commonjs/mol-repr/visual.d.ts +3 -0
  210. package/lib/commonjs/mol-repr/visual.js +53 -2
  211. package/lib/commonjs/mol-repr/visual.js.map +1 -1
  212. package/lib/commonjs/mol-repr/volume/direct-volume.d.ts +12 -0
  213. package/lib/commonjs/mol-repr/volume/isosurface.d.ts +24 -0
  214. package/lib/commonjs/mol-repr/volume/registry.d.ts +12 -0
  215. package/lib/commonjs/mol-repr/volume/representation.d.ts +4 -0
  216. package/lib/commonjs/mol-repr/volume/representation.js +3 -0
  217. package/lib/commonjs/mol-repr/volume/representation.js.map +1 -1
  218. package/lib/commonjs/mol-repr/volume/slice.d.ts +12 -0
  219. package/lib/commonjs/mol-theme/overpaint.js +1 -1
  220. package/lib/commonjs/mol-theme/overpaint.js.map +1 -1
  221. package/lib/commonjs/mol-theme/substance.d.ts +43 -0
  222. package/lib/commonjs/mol-theme/substance.js +132 -0
  223. package/lib/commonjs/mol-theme/substance.js.map +1 -0
  224. package/lib/commonjs/mol-util/material.d.ts +32 -0
  225. package/lib/commonjs/mol-util/material.js +51 -0
  226. package/lib/commonjs/mol-util/material.js.map +1 -0
  227. package/lib/commonjs/mol-util/number.d.ts +1 -0
  228. package/lib/commonjs/mol-util/number.js +5 -1
  229. package/lib/commonjs/mol-util/number.js.map +1 -1
  230. package/lib/extensions/anvil/behavior.d.ts +1 -0
  231. package/lib/extensions/anvil/representation.d.ts +20 -0
  232. package/lib/extensions/cellpack/representation.d.ts +4 -0
  233. package/lib/extensions/dnatco/confal-pyramids/representation.d.ts +12 -0
  234. package/lib/extensions/geo-export/controls.js +15 -17
  235. package/lib/extensions/geo-export/controls.js.map +1 -1
  236. package/lib/extensions/geo-export/glb-exporter.d.ts +4 -3
  237. package/lib/extensions/geo-export/glb-exporter.js +23 -11
  238. package/lib/extensions/geo-export/glb-exporter.js.map +1 -1
  239. package/lib/extensions/geo-export/usdz-exporter.d.ts +2 -5
  240. package/lib/extensions/geo-export/usdz-exporter.js +14 -15
  241. package/lib/extensions/geo-export/usdz-exporter.js.map +1 -1
  242. package/lib/extensions/rcsb/assembly-symmetry/behavior.d.ts +3 -2
  243. package/lib/extensions/rcsb/assembly-symmetry/representation.d.ts +4 -0
  244. package/lib/extensions/rcsb/validation-report/representation.d.ts +20 -0
  245. package/lib/mol-canvas3d/canvas3d.d.ts +18 -14
  246. package/lib/mol-canvas3d/helper/camera-helper.d.ts +1 -0
  247. package/lib/mol-canvas3d/helper/handle-helper.d.ts +1 -0
  248. package/lib/mol-canvas3d/helper/helper.d.ts +2 -0
  249. package/lib/mol-canvas3d/passes/image.d.ts +1 -0
  250. package/lib/mol-geo/geometry/base.d.ts +11 -2
  251. package/lib/mol-geo/geometry/base.js +14 -4
  252. package/lib/mol-geo/geometry/base.js.map +1 -1
  253. package/lib/mol-geo/geometry/cylinders/cylinders.d.ts +4 -0
  254. package/lib/mol-geo/geometry/cylinders/cylinders.js +3 -1
  255. package/lib/mol-geo/geometry/cylinders/cylinders.js.map +1 -1
  256. package/lib/mol-geo/geometry/direct-volume/direct-volume.d.ts +4 -0
  257. package/lib/mol-geo/geometry/direct-volume/direct-volume.js +4 -3
  258. package/lib/mol-geo/geometry/direct-volume/direct-volume.js.map +1 -1
  259. package/lib/mol-geo/geometry/image/image.d.ts +4 -0
  260. package/lib/mol-geo/geometry/image/image.js +3 -1
  261. package/lib/mol-geo/geometry/image/image.js.map +1 -1
  262. package/lib/mol-geo/geometry/lines/lines.d.ts +4 -0
  263. package/lib/mol-geo/geometry/lines/lines.js +3 -1
  264. package/lib/mol-geo/geometry/lines/lines.js.map +1 -1
  265. package/lib/mol-geo/geometry/mesh/color-smoothing.d.ts +1 -0
  266. package/lib/mol-geo/geometry/mesh/color-smoothing.js +33 -0
  267. package/lib/mol-geo/geometry/mesh/color-smoothing.js.map +1 -1
  268. package/lib/mol-geo/geometry/mesh/mesh.d.ts +4 -0
  269. package/lib/mol-geo/geometry/mesh/mesh.js +3 -1
  270. package/lib/mol-geo/geometry/mesh/mesh.js.map +1 -1
  271. package/lib/mol-geo/geometry/points/points.d.ts +4 -0
  272. package/lib/mol-geo/geometry/points/points.js +3 -1
  273. package/lib/mol-geo/geometry/points/points.js.map +1 -1
  274. package/lib/mol-geo/geometry/spheres/spheres.d.ts +4 -0
  275. package/lib/mol-geo/geometry/spheres/spheres.js +3 -1
  276. package/lib/mol-geo/geometry/spheres/spheres.js.map +1 -1
  277. package/lib/mol-geo/geometry/substance-data.d.ts +23 -0
  278. package/lib/mol-geo/geometry/substance-data.js +61 -0
  279. package/lib/mol-geo/geometry/substance-data.js.map +1 -0
  280. package/lib/mol-geo/geometry/text/text.d.ts +4 -0
  281. package/lib/mol-geo/geometry/text/text.js +3 -1
  282. package/lib/mol-geo/geometry/text/text.js.map +1 -1
  283. package/lib/mol-geo/geometry/texture-mesh/color-smoothing.d.ts +1 -0
  284. package/lib/mol-geo/geometry/texture-mesh/color-smoothing.js +31 -0
  285. package/lib/mol-geo/geometry/texture-mesh/color-smoothing.js.map +1 -1
  286. package/lib/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +4 -0
  287. package/lib/mol-geo/geometry/texture-mesh/texture-mesh.js +3 -1
  288. package/lib/mol-geo/geometry/texture-mesh/texture-mesh.js.map +1 -1
  289. package/lib/mol-gl/_spec/renderer.spec.js +1 -1
  290. package/lib/mol-gl/renderable/cylinders.d.ts +10 -0
  291. package/lib/mol-gl/renderable/direct-volume.d.ts +10 -0
  292. package/lib/mol-gl/renderable/image.d.ts +10 -0
  293. package/lib/mol-gl/renderable/lines.d.ts +10 -0
  294. package/lib/mol-gl/renderable/mesh.d.ts +10 -0
  295. package/lib/mol-gl/renderable/points.d.ts +10 -0
  296. package/lib/mol-gl/renderable/points.js +1 -2
  297. package/lib/mol-gl/renderable/points.js.map +1 -1
  298. package/lib/mol-gl/renderable/schema.d.ts +24 -5
  299. package/lib/mol-gl/renderable/schema.js +14 -10
  300. package/lib/mol-gl/renderable/schema.js.map +1 -1
  301. package/lib/mol-gl/renderable/spheres.d.ts +10 -0
  302. package/lib/mol-gl/renderable/text.d.ts +10 -0
  303. package/lib/mol-gl/renderable/texture-mesh.d.ts +10 -0
  304. package/lib/mol-gl/renderer.d.ts +9 -15
  305. package/lib/mol-gl/renderer.js +52 -59
  306. package/lib/mol-gl/renderer.js.map +1 -1
  307. package/lib/mol-gl/shader/chunks/apply-light-color.glsl.d.ts +3 -3
  308. package/lib/mol-gl/shader/chunks/apply-light-color.glsl.js +3 -3
  309. package/lib/mol-gl/shader/chunks/apply-light-color.glsl.js.map +1 -1
  310. package/lib/mol-gl/shader/chunks/assign-color-varying.glsl.d.ts +1 -1
  311. package/lib/mol-gl/shader/chunks/assign-color-varying.glsl.js +1 -1
  312. package/lib/mol-gl/shader/chunks/assign-color-varying.glsl.js.map +1 -1
  313. package/lib/mol-gl/shader/chunks/assign-material-color.glsl.d.ts +1 -1
  314. package/lib/mol-gl/shader/chunks/assign-material-color.glsl.js +1 -1
  315. package/lib/mol-gl/shader/chunks/assign-material-color.glsl.js.map +1 -1
  316. package/lib/mol-gl/shader/chunks/color-frag-params.glsl.d.ts +1 -1
  317. package/lib/mol-gl/shader/chunks/color-frag-params.glsl.js +1 -1
  318. package/lib/mol-gl/shader/chunks/color-frag-params.glsl.js.map +1 -1
  319. package/lib/mol-gl/shader/chunks/color-vert-params.glsl.d.ts +1 -1
  320. package/lib/mol-gl/shader/chunks/color-vert-params.glsl.js +1 -1
  321. package/lib/mol-gl/shader/chunks/color-vert-params.glsl.js.map +1 -1
  322. package/lib/mol-gl/shader/chunks/common-clip.glsl.d.ts +1 -1
  323. package/lib/mol-gl/shader/chunks/common-clip.glsl.js +1 -1
  324. package/lib/mol-gl/shader/chunks/common-clip.glsl.js.map +1 -1
  325. package/lib/mol-gl/shader/chunks/light-frag-params.glsl.d.ts +3 -3
  326. package/lib/mol-gl/shader/chunks/light-frag-params.glsl.js +3 -3
  327. package/lib/mol-gl/shader/chunks/light-frag-params.glsl.js.map +1 -1
  328. package/lib/mol-gl/shader/direct-volume.frag.d.ts +1 -1
  329. package/lib/mol-gl/shader/direct-volume.frag.js +1 -1
  330. package/lib/mol-gl/shader/direct-volume.frag.js.map +1 -1
  331. package/lib/mol-gl/shader/mesh.frag.d.ts +1 -1
  332. package/lib/mol-gl/shader/mesh.frag.js +1 -1
  333. package/lib/mol-gl/shader/mesh.frag.js.map +1 -1
  334. package/lib/mol-gl/shader-code.d.ts +0 -1
  335. package/lib/mol-gl/shader-code.js +31 -13
  336. package/lib/mol-gl/shader-code.js.map +1 -1
  337. package/lib/mol-gl/webgl/extensions.js +2 -4
  338. package/lib/mol-gl/webgl/extensions.js.map +1 -1
  339. package/lib/mol-math/linear-algebra/3d/vec3.d.ts +6 -0
  340. package/lib/mol-math/linear-algebra/3d/vec3.js +9 -0
  341. package/lib/mol-math/linear-algebra/3d/vec3.js.map +1 -1
  342. package/lib/mol-model/loci.d.ts +18 -18
  343. package/lib/mol-model-formats/shape/ply.d.ts +8 -0
  344. package/lib/mol-model-props/computed/representations/interactions-inter-unit-cylinder.d.ts +4 -0
  345. package/lib/mol-model-props/computed/representations/interactions-intra-unit-cylinder.d.ts +4 -0
  346. package/lib/mol-model-props/computed/representations/interactions.d.ts +12 -0
  347. package/lib/mol-model-props/integrative/cross-link-restraint/representation.d.ts +16 -0
  348. package/lib/mol-plugin/behavior/dynamic/representation.d.ts +2 -2
  349. package/lib/mol-plugin/behavior/dynamic/selection/structure-focus-representation.d.ts +5 -0
  350. package/lib/mol-plugin/behavior/dynamic/selection/structure-focus-representation.js +4 -2
  351. package/lib/mol-plugin/behavior/dynamic/selection/structure-focus-representation.js.map +1 -1
  352. package/lib/mol-plugin/commands.d.ts +9 -7
  353. package/lib/mol-plugin/spec.js +1 -0
  354. package/lib/mol-plugin/spec.js.map +1 -1
  355. package/lib/mol-plugin/util/viewport-screenshot.d.ts +3 -0
  356. package/lib/mol-plugin/version.js +2 -2
  357. package/lib/mol-plugin-state/builder/structure/representation-preset.d.ts +4 -4
  358. package/lib/mol-plugin-state/helpers/structure-substance.d.ts +13 -0
  359. package/lib/mol-plugin-state/helpers/structure-substance.js +121 -0
  360. package/lib/mol-plugin-state/helpers/structure-substance.js.map +1 -0
  361. package/lib/mol-plugin-state/manager/structure/component.d.ts +9 -2
  362. package/lib/mol-plugin-state/manager/structure/component.js +44 -22
  363. package/lib/mol-plugin-state/manager/structure/component.js.map +1 -1
  364. package/lib/mol-plugin-state/transforms/representation.d.ts +31 -4
  365. package/lib/mol-plugin-state/transforms/representation.js +119 -0
  366. package/lib/mol-plugin-state/transforms/representation.js.map +1 -1
  367. package/lib/mol-plugin-ui/viewport/simple-settings.js +2 -5
  368. package/lib/mol-plugin-ui/viewport/simple-settings.js.map +1 -1
  369. package/lib/mol-repr/representation.d.ts +3 -0
  370. package/lib/mol-repr/representation.js +7 -1
  371. package/lib/mol-repr/representation.js.map +1 -1
  372. package/lib/mol-repr/shape/loci/angle.d.ts +5 -1
  373. package/lib/mol-repr/shape/loci/common.d.ts +5 -1
  374. package/lib/mol-repr/shape/loci/dihedral.d.ts +5 -1
  375. package/lib/mol-repr/shape/loci/distance.d.ts +5 -1
  376. package/lib/mol-repr/shape/loci/label.d.ts +5 -1
  377. package/lib/mol-repr/shape/loci/orientation.d.ts +4 -0
  378. package/lib/mol-repr/shape/loci/plane.d.ts +4 -0
  379. package/lib/mol-repr/shape/model/unitcell.d.ts +4 -0
  380. package/lib/mol-repr/shape/representation.js +3 -0
  381. package/lib/mol-repr/shape/representation.js.map +1 -1
  382. package/lib/mol-repr/structure/complex-representation.js +6 -0
  383. package/lib/mol-repr/structure/complex-representation.js.map +1 -1
  384. package/lib/mol-repr/structure/complex-visual.d.ts +25 -1
  385. package/lib/mol-repr/structure/complex-visual.js +4 -0
  386. package/lib/mol-repr/structure/complex-visual.js.map +1 -1
  387. package/lib/mol-repr/structure/params.d.ts +33 -1
  388. package/lib/mol-repr/structure/registry.d.ts +57 -1
  389. package/lib/mol-repr/structure/representation/backbone.d.ts +12 -0
  390. package/lib/mol-repr/structure/representation/ball-and-stick.d.ts +12 -0
  391. package/lib/mol-repr/structure/representation/carbohydrate.d.ts +12 -0
  392. package/lib/mol-repr/structure/representation/cartoon.d.ts +12 -0
  393. package/lib/mol-repr/structure/representation/ellipsoid.d.ts +12 -0
  394. package/lib/mol-repr/structure/representation/gaussian-surface.d.ts +12 -0
  395. package/lib/mol-repr/structure/representation/gaussian-volume.d.ts +12 -0
  396. package/lib/mol-repr/structure/representation/label.d.ts +15 -3
  397. package/lib/mol-repr/structure/representation/line.d.ts +12 -0
  398. package/lib/mol-repr/structure/representation/molecular-surface.d.ts +12 -0
  399. package/lib/mol-repr/structure/representation/orientation.d.ts +12 -0
  400. package/lib/mol-repr/structure/representation/point.d.ts +12 -0
  401. package/lib/mol-repr/structure/representation/putty.d.ts +12 -0
  402. package/lib/mol-repr/structure/representation/spacefill.d.ts +12 -0
  403. package/lib/mol-repr/structure/units-representation.js +8 -2
  404. package/lib/mol-repr/structure/units-representation.js.map +1 -1
  405. package/lib/mol-repr/structure/units-visual.d.ts +33 -1
  406. package/lib/mol-repr/structure/units-visual.js +4 -0
  407. package/lib/mol-repr/structure/units-visual.js.map +1 -1
  408. package/lib/mol-repr/structure/visual/bond-inter-unit-cylinder.d.ts +8 -0
  409. package/lib/mol-repr/structure/visual/bond-inter-unit-line.d.ts +4 -0
  410. package/lib/mol-repr/structure/visual/bond-intra-unit-cylinder.d.ts +8 -0
  411. package/lib/mol-repr/structure/visual/bond-intra-unit-line.d.ts +4 -0
  412. package/lib/mol-repr/structure/visual/carbohydrate-link-cylinder.d.ts +4 -0
  413. package/lib/mol-repr/structure/visual/carbohydrate-symbol-mesh.d.ts +4 -0
  414. package/lib/mol-repr/structure/visual/carbohydrate-terminal-link-cylinder.d.ts +4 -0
  415. package/lib/mol-repr/structure/visual/element-cross.d.ts +4 -0
  416. package/lib/mol-repr/structure/visual/element-point.d.ts +4 -0
  417. package/lib/mol-repr/structure/visual/element-sphere.d.ts +8 -0
  418. package/lib/mol-repr/structure/visual/ellipsoid-mesh.d.ts +4 -0
  419. package/lib/mol-repr/structure/visual/gaussian-density-volume.d.ts +8 -0
  420. package/lib/mol-repr/structure/visual/gaussian-surface-mesh.d.ts +16 -0
  421. package/lib/mol-repr/structure/visual/gaussian-surface-wireframe.d.ts +4 -0
  422. package/lib/mol-repr/structure/visual/label-text.d.ts +5 -1
  423. package/lib/mol-repr/structure/visual/molecular-surface-mesh.d.ts +4 -0
  424. package/lib/mol-repr/structure/visual/molecular-surface-wireframe.d.ts +4 -0
  425. package/lib/mol-repr/structure/visual/nucleotide-block-mesh.d.ts +4 -0
  426. package/lib/mol-repr/structure/visual/nucleotide-ring-mesh.d.ts +4 -0
  427. package/lib/mol-repr/structure/visual/orientation-ellipsoid-mesh.d.ts +4 -0
  428. package/lib/mol-repr/structure/visual/polymer-backbone-cylinder.d.ts +8 -0
  429. package/lib/mol-repr/structure/visual/polymer-backbone-sphere.d.ts +8 -0
  430. package/lib/mol-repr/structure/visual/polymer-direction-wedge.d.ts +4 -0
  431. package/lib/mol-repr/structure/visual/polymer-gap-cylinder.d.ts +4 -0
  432. package/lib/mol-repr/structure/visual/polymer-trace-mesh.d.ts +4 -0
  433. package/lib/mol-repr/structure/visual/polymer-tube-mesh.d.ts +4 -0
  434. package/lib/mol-repr/visual.d.ts +3 -0
  435. package/lib/mol-repr/visual.js +55 -4
  436. package/lib/mol-repr/visual.js.map +1 -1
  437. package/lib/mol-repr/volume/direct-volume.d.ts +12 -0
  438. package/lib/mol-repr/volume/isosurface.d.ts +24 -0
  439. package/lib/mol-repr/volume/registry.d.ts +12 -0
  440. package/lib/mol-repr/volume/representation.d.ts +4 -0
  441. package/lib/mol-repr/volume/representation.js +3 -0
  442. package/lib/mol-repr/volume/representation.js.map +1 -1
  443. package/lib/mol-repr/volume/slice.d.ts +12 -0
  444. package/lib/mol-theme/overpaint.js +1 -1
  445. package/lib/mol-theme/overpaint.js.map +1 -1
  446. package/lib/mol-theme/substance.d.ts +43 -0
  447. package/lib/mol-theme/substance.js +128 -0
  448. package/lib/mol-theme/substance.js.map +1 -0
  449. package/lib/mol-util/material.d.ts +32 -0
  450. package/lib/mol-util/material.js +47 -0
  451. package/lib/mol-util/material.js.map +1 -0
  452. package/lib/mol-util/number.d.ts +1 -0
  453. package/lib/mol-util/number.js +3 -0
  454. package/lib/mol-util/number.js.map +1 -1
  455. package/lib/tsconfig.commonjs.tsbuildinfo +1 -1
  456. package/package.json +1 -1

There are too many changes on this page to be displayed.


The amount of changes on this page would crash your brower.

You can still verify the content by downloading the package file manually.