molstar 2.3.9 → 3.0.0-dev.2
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/LICENSE +20 -20
- package/README.md +187 -176
- package/build/viewer/embedded.html +43 -43
- package/build/viewer/index.html +94 -94
- package/build/viewer/molstar.js +1 -1
- package/lib/apps/docking-viewer/index.html +36 -36
- package/lib/apps/docking-viewer/viewport.d.ts +2 -2
- package/lib/apps/docking-viewer/viewport.js +16 -14
- package/lib/apps/viewer/embedded.html +43 -43
- package/lib/apps/viewer/index.html +94 -94
- package/lib/cli/chem-comp-dict/util.d.ts +4 -4
- package/lib/cli/cifschema/util/cif-dic.js +1 -0
- package/lib/commonjs/apps/docking-viewer/viewport.d.ts +2 -2
- package/lib/commonjs/apps/docking-viewer/viewport.js +16 -14
- package/lib/commonjs/apps/viewer/index.d.ts +1 -1
- package/lib/commonjs/cli/chem-comp-dict/util.d.ts +4 -4
- package/lib/commonjs/cli/cifschema/util/cif-dic.js +1 -0
- package/lib/commonjs/extensions/anvil/behavior.d.ts +6 -2
- package/lib/commonjs/extensions/anvil/representation.d.ts +25 -5
- package/lib/commonjs/extensions/cellpack/model.d.ts +1 -1
- package/lib/commonjs/extensions/cellpack/representation.d.ts +6 -2
- package/lib/commonjs/extensions/dnatco/confal-pyramids/behavior.d.ts +1 -1
- package/lib/commonjs/extensions/dnatco/confal-pyramids/representation.d.ts +18 -6
- package/lib/commonjs/extensions/geo-export/controls.js +16 -18
- package/lib/commonjs/extensions/geo-export/glb-exporter.d.ts +5 -3
- package/lib/commonjs/extensions/geo-export/glb-exporter.js +49 -27
- package/lib/commonjs/extensions/geo-export/mesh-exporter.d.ts +31 -2
- package/lib/commonjs/extensions/geo-export/mesh-exporter.js +87 -15
- package/lib/commonjs/extensions/geo-export/obj-exporter.d.ts +1 -0
- package/lib/commonjs/extensions/geo-export/obj-exporter.js +24 -15
- package/lib/commonjs/extensions/geo-export/ui.js +24 -20
- package/lib/commonjs/extensions/geo-export/usdz-exporter.d.ts +3 -5
- package/lib/commonjs/extensions/geo-export/usdz-exporter.js +39 -30
- package/lib/commonjs/extensions/mp4-export/controls.js +1 -1
- package/lib/commonjs/extensions/mp4-export/ui.js +7 -6
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.d.ts +10 -6
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/color.d.ts +12 -12
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.d.ts +5 -1
- package/lib/commonjs/extensions/rcsb/graphql/types.d.ts +22 -21
- package/lib/commonjs/extensions/rcsb/validation-report/behavior.d.ts +3 -3
- package/lib/commonjs/extensions/rcsb/validation-report/representation.d.ts +30 -10
- package/lib/commonjs/mol-canvas3d/canvas3d.d.ts +18 -14
- package/lib/commonjs/mol-canvas3d/helper/camera-helper.d.ts +7 -3
- package/lib/commonjs/mol-canvas3d/helper/handle-helper.d.ts +5 -1
- package/lib/commonjs/mol-canvas3d/helper/helper.d.ts +2 -0
- package/lib/commonjs/mol-canvas3d/passes/draw.js +3 -11
- package/lib/commonjs/mol-canvas3d/passes/image.d.ts +3 -2
- package/lib/commonjs/mol-data/int/impl/sorted-array.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/base.d.ts +26 -6
- package/lib/commonjs/mol-geo/geometry/base.js +49 -6
- package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.d.ts +5 -1
- package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.js +3 -1
- package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.d.ts +7 -3
- package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.js +4 -3
- package/lib/commonjs/mol-geo/geometry/image/image.d.ts +5 -1
- package/lib/commonjs/mol-geo/geometry/image/image.js +3 -1
- package/lib/commonjs/mol-geo/geometry/lines/lines.d.ts +5 -1
- package/lib/commonjs/mol-geo/geometry/lines/lines.js +3 -1
- package/lib/commonjs/mol-geo/geometry/mesh/builder/tube.js +18 -8
- package/lib/commonjs/mol-geo/geometry/mesh/color-smoothing.d.ts +10 -2
- package/lib/commonjs/mol-geo/geometry/mesh/color-smoothing.js +188 -35
- package/lib/commonjs/mol-geo/geometry/mesh/mesh.d.ts +5 -1
- package/lib/commonjs/mol-geo/geometry/mesh/mesh.js +3 -1
- package/lib/commonjs/mol-geo/geometry/overpaint-data.d.ts +7 -2
- package/lib/commonjs/mol-geo/geometry/overpaint-data.js +10 -1
- package/lib/commonjs/mol-geo/geometry/points/points.d.ts +7 -3
- package/lib/commonjs/mol-geo/geometry/points/points.js +3 -1
- package/lib/commonjs/mol-geo/geometry/spheres/spheres.d.ts +5 -2
- package/lib/commonjs/mol-geo/geometry/spheres/spheres.js +3 -1
- package/lib/commonjs/mol-geo/geometry/substance-data.d.ts +23 -0
- package/lib/commonjs/mol-geo/geometry/substance-data.js +68 -0
- package/lib/commonjs/mol-geo/geometry/text/text.d.ts +5 -1
- package/lib/commonjs/mol-geo/geometry/text/text.js +3 -1
- package/lib/commonjs/mol-geo/geometry/texture-mesh/color-smoothing.d.ts +8 -3
- package/lib/commonjs/mol-geo/geometry/texture-mesh/color-smoothing.js +194 -27
- package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +8 -2
- package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js +4 -1
- package/lib/commonjs/mol-geo/geometry/transparency-data.d.ts +7 -2
- package/lib/commonjs/mol-geo/geometry/transparency-data.js +10 -1
- package/lib/commonjs/mol-gl/compute/marching-cubes/isosurface.js +3 -3
- package/lib/commonjs/mol-gl/compute/util.d.ts +25 -6
- package/lib/commonjs/mol-gl/compute/util.js +76 -21
- package/lib/commonjs/mol-gl/renderable/cylinders.d.ts +18 -0
- package/lib/commonjs/mol-gl/renderable/direct-volume.d.ts +18 -0
- package/lib/commonjs/mol-gl/renderable/image.d.ts +18 -0
- package/lib/commonjs/mol-gl/renderable/lines.d.ts +18 -0
- package/lib/commonjs/mol-gl/renderable/mesh.d.ts +18 -0
- package/lib/commonjs/mol-gl/renderable/points.d.ts +18 -0
- package/lib/commonjs/mol-gl/renderable/points.js +1 -2
- package/lib/commonjs/mol-gl/renderable/schema.d.ts +40 -5
- package/lib/commonjs/mol-gl/renderable/schema.js +23 -11
- package/lib/commonjs/mol-gl/renderable/spheres.d.ts +18 -0
- package/lib/commonjs/mol-gl/renderable/text.d.ts +18 -0
- package/lib/commonjs/mol-gl/renderable/texture-mesh.d.ts +32 -13
- package/lib/commonjs/mol-gl/renderable/texture-mesh.js +1 -1
- package/lib/commonjs/mol-gl/renderer.d.ts +9 -15
- package/lib/commonjs/mol-gl/renderer.js +56 -61
- package/lib/commonjs/mol-gl/shader/chunks/apply-light-color.glsl.d.ts +3 -3
- package/lib/commonjs/mol-gl/shader/chunks/apply-light-color.glsl.js +3 -3
- package/lib/commonjs/mol-gl/shader/chunks/assign-color-varying.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-color-varying.glsl.js +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.js +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/color-frag-params.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/color-frag-params.glsl.js +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.js +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/common-clip.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/common-clip.glsl.js +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/light-frag-params.glsl.d.ts +3 -3
- package/lib/commonjs/mol-gl/shader/chunks/light-frag-params.glsl.js +3 -3
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.frag.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.frag.js +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.vert.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.vert.js +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/normalize.frag.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/normalize.frag.js +1 -1
- package/lib/commonjs/mol-gl/shader/direct-volume.frag.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/direct-volume.frag.js +1 -1
- package/lib/commonjs/mol-gl/shader/mesh.frag.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/mesh.frag.js +1 -1
- package/lib/commonjs/mol-gl/shader/mesh.vert.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/mesh.vert.js +1 -1
- package/lib/commonjs/mol-gl/shader-code.d.ts +0 -1
- package/lib/commonjs/mol-gl/shader-code.js +31 -13
- package/lib/commonjs/mol-gl/webgl/context.d.ts +1 -1
- package/lib/commonjs/mol-gl/webgl/extensions.js +3 -9
- package/lib/commonjs/mol-gl/webgl/resources.js +1 -1
- package/lib/commonjs/mol-gl/webgl/vertex-array.d.ts +3 -2
- package/lib/commonjs/mol-gl/webgl/vertex-array.js +9 -2
- package/lib/commonjs/mol-io/reader/cif/schema/bird.d.ts +2 -2
- package/lib/commonjs/mol-io/reader/cif/schema/bird.js +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema/ccd.d.ts +3 -3
- package/lib/commonjs/mol-io/reader/cif/schema/ccd.js +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema/cif-core.d.ts +8 -5
- package/lib/commonjs/mol-io/reader/cif/schema/cif-core.js +15 -5
- package/lib/commonjs/mol-io/reader/cif/schema/density-server.d.ts +3 -3
- package/lib/commonjs/mol-io/reader/cif/schema/mmcif-extras.d.ts +3 -3
- package/lib/commonjs/mol-io/reader/cif/schema/mmcif.d.ts +15 -15
- package/lib/commonjs/mol-io/reader/cif/schema/mmcif.js +1 -1
- package/lib/commonjs/mol-io/reader/ply/schema.d.ts +1 -1
- package/lib/commonjs/mol-io/reader/sdf/parser-v3-util.d.ts +9 -0
- package/lib/commonjs/mol-io/reader/sdf/parser-v3-util.js +91 -0
- package/lib/commonjs/mol-io/reader/sdf/parser.d.ts +1 -1
- package/lib/commonjs/mol-io/reader/sdf/parser.js +12 -4
- package/lib/commonjs/mol-math/linear-algebra/3d/vec3.d.ts +6 -0
- package/lib/commonjs/mol-math/linear-algebra/3d/vec3.js +9 -0
- package/lib/commonjs/mol-model/loci.d.ts +30 -30
- package/lib/commonjs/mol-model/shape/shape.d.ts +1 -1
- package/lib/commonjs/mol-model/structure/query/utils/structure-distance.d.ts +54 -5
- package/lib/commonjs/mol-model/structure/structure/properties.d.ts +2 -2
- package/lib/commonjs/mol-model/structure/structure/properties.js +5 -5
- package/lib/commonjs/mol-model/structure/structure/unit.d.ts +2 -2
- package/lib/commonjs/mol-model-formats/shape/ply.d.ts +14 -6
- package/lib/commonjs/mol-model-formats/structure/basic/schema.d.ts +6 -6
- package/lib/commonjs/mol-model-formats/structure/common/component.d.ts +8 -8
- package/lib/commonjs/mol-model-props/computed/interactions/hydrogen-bonds.d.ts +1 -1
- package/lib/commonjs/mol-model-props/computed/interactions/hydrogen-bonds.js +1 -7
- package/lib/commonjs/mol-model-props/computed/representations/interactions-inter-unit-cylinder.d.ts +6 -2
- package/lib/commonjs/mol-model-props/computed/representations/interactions-intra-unit-cylinder.d.ts +6 -2
- package/lib/commonjs/mol-model-props/computed/representations/interactions.d.ts +18 -6
- package/lib/commonjs/mol-model-props/integrative/cross-link-restraint/representation.d.ts +24 -8
- package/lib/commonjs/mol-model-props/sequence/themes/best-database-mapping.d.ts +12 -12
- package/lib/commonjs/mol-plugin/behavior/behavior.d.ts +1 -1
- package/lib/commonjs/mol-plugin/behavior/dynamic/representation.d.ts +2 -2
- package/lib/commonjs/mol-plugin/behavior/dynamic/selection/structure-focus-representation.d.ts +5 -1
- package/lib/commonjs/mol-plugin/behavior/dynamic/selection/structure-focus-representation.js +4 -2
- package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/behavior.d.ts +2 -2
- package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/model.d.ts +2 -3
- package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/transformers.d.ts +3 -3
- package/lib/commonjs/mol-plugin/commands.d.ts +13 -7
- package/lib/commonjs/mol-plugin/layout.d.ts +4 -4
- package/lib/commonjs/mol-plugin/spec.js +1 -0
- package/lib/commonjs/mol-plugin/state.d.ts +8 -0
- package/lib/commonjs/mol-plugin/state.js +27 -17
- package/lib/commonjs/mol-plugin/util/viewport-screenshot.d.ts +21 -9
- package/lib/commonjs/mol-plugin-state/actions/file.js +4 -2
- package/lib/commonjs/mol-plugin-state/actions/structure.d.ts +1 -1
- package/lib/commonjs/mol-plugin-state/animation/built-in/model-index.d.ts +2 -2
- package/lib/commonjs/mol-plugin-state/animation/helpers.d.ts +5 -5
- package/lib/commonjs/mol-plugin-state/builder/structure/hierarchy-preset.d.ts +3 -3
- package/lib/commonjs/mol-plugin-state/builder/structure/hierarchy.d.ts +3 -3
- package/lib/commonjs/mol-plugin-state/builder/structure/representation-preset.d.ts +21 -21
- package/lib/commonjs/mol-plugin-state/builder/structure/representation.d.ts +1 -1
- package/lib/commonjs/mol-plugin-state/formats/volume.d.ts +6 -6
- package/lib/commonjs/mol-plugin-state/formats/volume.js +1 -0
- package/lib/commonjs/mol-plugin-state/helpers/root-structure.d.ts +3 -3
- package/lib/commonjs/mol-plugin-state/helpers/structure-component.d.ts +2 -2
- package/lib/commonjs/mol-plugin-state/helpers/structure-selection-query.d.ts +1 -1
- package/lib/commonjs/mol-plugin-state/helpers/structure-selection-query.js +14 -3
- package/lib/commonjs/mol-plugin-state/helpers/structure-substance.d.ts +13 -0
- package/lib/commonjs/mol-plugin-state/helpers/structure-substance.js +126 -0
- package/lib/commonjs/mol-plugin-state/manager/interactivity.d.ts +1 -1
- package/lib/commonjs/mol-plugin-state/manager/snapshots.js +2 -1
- package/lib/commonjs/mol-plugin-state/manager/structure/component.d.ts +11 -2
- package/lib/commonjs/mol-plugin-state/manager/structure/component.js +44 -22
- package/lib/commonjs/mol-plugin-state/manager/structure/selection.d.ts +2 -2
- package/lib/commonjs/mol-plugin-state/transforms/data.d.ts +1 -1
- package/lib/commonjs/mol-plugin-state/transforms/model.d.ts +5 -5
- package/lib/commonjs/mol-plugin-state/transforms/representation.d.ts +75 -19
- package/lib/commonjs/mol-plugin-state/transforms/representation.js +160 -15
- package/lib/commonjs/mol-plugin-ui/controls/parameters.d.ts +6 -0
- package/lib/commonjs/mol-plugin-ui/controls/parameters.js +15 -3
- package/lib/commonjs/mol-plugin-ui/state/common.js +10 -9
- package/lib/commonjs/mol-plugin-ui/state/snapshots.js +10 -8
- package/lib/commonjs/mol-plugin-ui/structure/measurements.d.ts +1 -1
- package/lib/commonjs/mol-plugin-ui/structure/selection.js +2 -1
- package/lib/commonjs/mol-plugin-ui/viewport/simple-settings.js +2 -5
- package/lib/commonjs/mol-repr/representation.d.ts +12 -0
- package/lib/commonjs/mol-repr/representation.js +50 -5
- package/lib/commonjs/mol-repr/shape/loci/angle.d.ts +6 -2
- package/lib/commonjs/mol-repr/shape/loci/common.d.ts +6 -2
- package/lib/commonjs/mol-repr/shape/loci/dihedral.d.ts +6 -2
- package/lib/commonjs/mol-repr/shape/loci/distance.d.ts +6 -2
- package/lib/commonjs/mol-repr/shape/loci/label.d.ts +6 -2
- package/lib/commonjs/mol-repr/shape/loci/orientation.d.ts +6 -2
- package/lib/commonjs/mol-repr/shape/loci/plane.d.ts +5 -1
- package/lib/commonjs/mol-repr/shape/model/unitcell.d.ts +6 -2
- package/lib/commonjs/mol-repr/shape/representation.js +8 -0
- package/lib/commonjs/mol-repr/structure/complex-representation.js +17 -4
- package/lib/commonjs/mol-repr/structure/complex-visual.d.ts +38 -14
- package/lib/commonjs/mol-repr/structure/complex-visual.js +15 -5
- package/lib/commonjs/mol-repr/structure/params.d.ts +45 -13
- package/lib/commonjs/mol-repr/structure/registry.d.ts +96 -40
- package/lib/commonjs/mol-repr/structure/representation/backbone.d.ts +18 -6
- package/lib/commonjs/mol-repr/structure/representation/ball-and-stick.d.ts +21 -9
- package/lib/commonjs/mol-repr/structure/representation/carbohydrate.d.ts +18 -6
- package/lib/commonjs/mol-repr/structure/representation/cartoon.d.ts +18 -6
- package/lib/commonjs/mol-repr/structure/representation/ellipsoid.d.ts +21 -9
- package/lib/commonjs/mol-repr/structure/representation/gaussian-surface.d.ts +24 -12
- package/lib/commonjs/mol-repr/structure/representation/gaussian-volume.d.ts +21 -9
- package/lib/commonjs/mol-repr/structure/representation/label.d.ts +24 -12
- package/lib/commonjs/mol-repr/structure/representation/line.d.ts +24 -12
- package/lib/commonjs/mol-repr/structure/representation/molecular-surface.d.ts +24 -12
- package/lib/commonjs/mol-repr/structure/representation/orientation.d.ts +18 -6
- package/lib/commonjs/mol-repr/structure/representation/point.d.ts +21 -9
- package/lib/commonjs/mol-repr/structure/representation/putty.d.ts +18 -6
- package/lib/commonjs/mol-repr/structure/representation/spacefill.d.ts +18 -6
- package/lib/commonjs/mol-repr/structure/units-representation.js +23 -17
- package/lib/commonjs/mol-repr/structure/units-visual.d.ts +51 -19
- package/lib/commonjs/mol-repr/structure/units-visual.js +15 -5
- package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-cylinder.d.ts +14 -6
- package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-line.d.ts +7 -3
- package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-cylinder.d.ts +14 -6
- package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-line.d.ts +7 -3
- package/lib/commonjs/mol-repr/structure/visual/carbohydrate-link-cylinder.d.ts +6 -2
- package/lib/commonjs/mol-repr/structure/visual/carbohydrate-symbol-mesh.d.ts +6 -2
- package/lib/commonjs/mol-repr/structure/visual/carbohydrate-terminal-link-cylinder.d.ts +6 -2
- package/lib/commonjs/mol-repr/structure/visual/element-cross.d.ts +6 -2
- package/lib/commonjs/mol-repr/structure/visual/element-point.d.ts +7 -3
- package/lib/commonjs/mol-repr/structure/visual/element-sphere.d.ts +12 -4
- package/lib/commonjs/mol-repr/structure/visual/ellipsoid-mesh.d.ts +6 -2
- package/lib/commonjs/mol-repr/structure/visual/gaussian-density-volume.d.ts +14 -6
- package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-mesh.d.ts +32 -16
- package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-mesh.js +14 -12
- package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-wireframe.d.ts +6 -2
- package/lib/commonjs/mol-repr/structure/visual/label-text.d.ts +8 -4
- package/lib/commonjs/mol-repr/structure/visual/molecular-surface-mesh.d.ts +8 -4
- package/lib/commonjs/mol-repr/structure/visual/molecular-surface-mesh.js +5 -4
- package/lib/commonjs/mol-repr/structure/visual/molecular-surface-wireframe.d.ts +6 -2
- package/lib/commonjs/mol-repr/structure/visual/nucleotide-block-mesh.d.ts +6 -2
- package/lib/commonjs/mol-repr/structure/visual/nucleotide-ring-mesh.d.ts +6 -2
- package/lib/commonjs/mol-repr/structure/visual/orientation-ellipsoid-mesh.d.ts +6 -2
- package/lib/commonjs/mol-repr/structure/visual/polymer-backbone-cylinder.d.ts +12 -4
- package/lib/commonjs/mol-repr/structure/visual/polymer-backbone-sphere.d.ts +12 -4
- package/lib/commonjs/mol-repr/structure/visual/polymer-direction-wedge.d.ts +6 -2
- package/lib/commonjs/mol-repr/structure/visual/polymer-gap-cylinder.d.ts +6 -2
- package/lib/commonjs/mol-repr/structure/visual/polymer-trace-mesh.d.ts +6 -2
- package/lib/commonjs/mol-repr/structure/visual/polymer-tube-mesh.d.ts +6 -2
- package/lib/commonjs/mol-repr/structure/visual/util/bond.d.ts +10 -10
- package/lib/commonjs/mol-repr/structure/visual/util/common.d.ts +2 -2
- package/lib/commonjs/mol-repr/structure/visual/util/element.d.ts +4 -4
- package/lib/commonjs/mol-repr/structure/visual/util/polymer.d.ts +2 -2
- package/lib/commonjs/mol-repr/visual.d.ts +24 -13
- package/lib/commonjs/mol-repr/visual.js +106 -8
- package/lib/commonjs/mol-repr/volume/direct-volume.d.ts +21 -9
- package/lib/commonjs/mol-repr/volume/isosurface.d.ts +36 -12
- package/lib/commonjs/mol-repr/volume/registry.d.ts +19 -7
- package/lib/commonjs/mol-repr/volume/representation.d.ts +6 -2
- package/lib/commonjs/mol-repr/volume/representation.js +15 -3
- package/lib/commonjs/mol-repr/volume/slice.d.ts +18 -6
- package/lib/commonjs/mol-script/language/builder.d.ts +1 -0
- package/lib/commonjs/mol-state/state.js +7 -5
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import { ParamDefinition as PD } from '../../mol-util/param-definition';
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export declare function getUnitKindsParam(defaultValue: UnitKind[]): PD.MultiSelect<"spheres" | "
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export declare function getUnitKindsParam(defaultValue: UnitKind[]): PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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export declare const StructureParams: {
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unitKinds: PD.MultiSelect<"spheres" | "
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+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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includeParent: PD.BooleanParam;
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};
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export declare type StructureParams = typeof StructureParams;
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@@ -19,7 +19,11 @@ export declare const StructureMeshParams: {
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ignoreLight: PD.BooleanParam;
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xrayShaded: PD.BooleanParam;
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alpha: PD.Numeric;
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quality: PD.Select<"
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quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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material: PD.Group<PD.Normalize<{
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metalness: number;
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roughness: number;
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}>>;
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};
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export declare type StructureMeshParams = typeof StructureMeshParams;
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export declare const StructureSpheresParams: {
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@@ -28,7 +32,11 @@ export declare const StructureSpheresParams: {
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xrayShaded: PD.BooleanParam;
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alpha: PD.Numeric;
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quality: PD.Select<"
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quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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material: PD.Group<PD.Normalize<{
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metalness: number;
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roughness: number;
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}>>;
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};
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export declare type StructureSpheresParams = typeof StructureSpheresParams;
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export declare const StructureCylindersParams: {
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@@ -38,22 +46,34 @@ export declare const StructureCylindersParams: {
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ignoreLight: PD.BooleanParam;
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xrayShaded: PD.BooleanParam;
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alpha: PD.Numeric;
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quality: PD.Select<"
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quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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material: PD.Group<PD.Normalize<{
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metalness: number;
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roughness: number;
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}>>;
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};
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export declare type StructureCylindersParams = typeof StructureCylindersParams;
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export declare const StructurePointsParams: {
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sizeFactor: PD.Numeric;
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pointSizeAttenuation: PD.BooleanParam;
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pointStyle: PD.Select<"
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pointStyle: PD.Select<"circle" | "square" | "fuzzy">;
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alpha: PD.Numeric;
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quality: PD.Select<"
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quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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material: PD.Group<PD.Normalize<{
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metalness: number;
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roughness: number;
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}>>;
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};
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export declare type StructurePointsParams = typeof StructurePointsParams;
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export declare const StructureLinesParams: {
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sizeFactor: PD.Numeric;
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lineSizeAttenuation: PD.BooleanParam;
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alpha: PD.Numeric;
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quality: PD.Select<"
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quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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material: PD.Group<PD.Normalize<{
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metalness: number;
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roughness: number;
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}>>;
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};
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export declare type StructureLinesParams = typeof StructureLinesParams;
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export declare const StructureTextParams: {
|
|
@@ -70,14 +90,18 @@ export declare const StructureTextParams: {
|
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tether: PD.BooleanParam;
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tetherLength: PD.Numeric;
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tetherBaseWidth: PD.Numeric;
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attachment: PD.Select<"
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|
+
attachment: PD.Select<"bottom-left" | "bottom-center" | "bottom-right" | "middle-left" | "middle-center" | "middle-right" | "top-left" | "top-center" | "top-right">;
|
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|
fontFamily: PD.Select<import("../../mol-geo/geometry/text/font-atlas").FontFamily>;
|
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fontQuality: PD.Select<number>;
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fontStyle: PD.Select<import("../../mol-geo/geometry/text/font-atlas").FontStyle>;
|
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fontVariant: PD.Select<import("../../mol-geo/geometry/text/font-atlas").FontVariant>;
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fontWeight: PD.Select<import("../../mol-geo/geometry/text/font-atlas").FontWeight>;
|
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alpha: PD.Numeric;
|
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|
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quality: PD.Select<"
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|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
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|
+
material: PD.Group<PD.Normalize<{
|
|
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metalness: number;
|
|
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roughness: number;
|
|
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|
+
}>>;
|
|
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|
};
|
|
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106
|
export declare type StructureTextParams = typeof StructureTextParams;
|
|
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107
|
export declare const StructureDirectVolumeParams: {
|
|
@@ -89,7 +113,7 @@ export declare const StructureDirectVolumeParams: {
|
|
|
89
113
|
renderMode: PD.Mapped<PD.NamedParams<PD.Normalize<{
|
|
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114
|
controlPoints: import("../../mol-math/linear-algebra/3d/vec2").Vec2[];
|
|
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115
|
list: {
|
|
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|
-
kind: "
|
|
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|
+
kind: "set" | "interpolate";
|
|
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|
colors: import("../../mol-util/color/color").ColorListEntry[];
|
|
94
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|
};
|
|
95
119
|
}>, "volume"> | PD.NamedParams<PD.Normalize<{
|
|
@@ -105,7 +129,11 @@ export declare const StructureDirectVolumeParams: {
|
|
|
105
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|
stepsPerCell: PD.Numeric;
|
|
106
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|
jumpLength: PD.Numeric;
|
|
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|
alpha: PD.Numeric;
|
|
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|
-
quality: PD.Select<"
|
|
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|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
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|
+
material: PD.Group<PD.Normalize<{
|
|
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|
+
metalness: number;
|
|
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|
+
roughness: number;
|
|
136
|
+
}>>;
|
|
109
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|
};
|
|
110
138
|
export declare type StructureDirectVolumeParams = typeof StructureDirectVolumeParams;
|
|
111
139
|
export declare const StructureTextureMeshParams: {
|
|
@@ -115,6 +143,10 @@ export declare const StructureTextureMeshParams: {
|
|
|
115
143
|
ignoreLight: PD.BooleanParam;
|
|
116
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|
xrayShaded: PD.BooleanParam;
|
|
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|
alpha: PD.Numeric;
|
|
118
|
-
quality: PD.Select<"
|
|
146
|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
147
|
+
material: PD.Group<PD.Normalize<{
|
|
148
|
+
metalness: number;
|
|
149
|
+
roughness: number;
|
|
150
|
+
}>>;
|
|
119
151
|
};
|
|
120
152
|
export declare type StructureTextureMeshParams = typeof StructureTextureMeshParams;
|
|
@@ -14,7 +14,7 @@ export declare namespace StructureRepresentationRegistry {
|
|
|
14
14
|
cartoon: import("./representation").StructureRepresentationProvider<{
|
|
15
15
|
sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
16
16
|
visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"polymer-trace" | "polymer-gap" | "nucleotide-block" | "nucleotide-ring" | "direction-wedge">;
|
|
17
|
-
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "
|
|
17
|
+
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
18
18
|
includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
19
19
|
doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
20
20
|
flipSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
@@ -22,7 +22,11 @@ export declare namespace StructureRepresentationRegistry {
|
|
|
22
22
|
ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
23
23
|
xrayShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
24
24
|
alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
25
|
-
quality: import("../../mol-util/param-definition").ParamDefinition.Select<"
|
|
25
|
+
quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
26
|
+
material: import("../../mol-util/param-definition").ParamDefinition.Group<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
|
|
27
|
+
metalness: number;
|
|
28
|
+
roughness: number;
|
|
29
|
+
}>>;
|
|
26
30
|
radialSegments: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
27
31
|
detail: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
28
32
|
aspectRatio: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
@@ -36,7 +40,7 @@ export declare namespace StructureRepresentationRegistry {
|
|
|
36
40
|
visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"polymer-gap" | "polymer-backbone-cylinder" | "polymer-backbone-sphere">;
|
|
37
41
|
sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
38
42
|
radialSegments: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
39
|
-
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "
|
|
43
|
+
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
40
44
|
includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
41
45
|
doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
42
46
|
flipSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
@@ -44,13 +48,17 @@ export declare namespace StructureRepresentationRegistry {
|
|
|
44
48
|
ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
45
49
|
xrayShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
46
50
|
alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
47
|
-
quality: import("../../mol-util/param-definition").ParamDefinition.Select<"
|
|
51
|
+
quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
52
|
+
material: import("../../mol-util/param-definition").ParamDefinition.Group<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
|
|
53
|
+
metalness: number;
|
|
54
|
+
roughness: number;
|
|
55
|
+
}>>;
|
|
48
56
|
tryUseImpostor: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
49
57
|
detail: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
50
58
|
}, "backbone">;
|
|
51
59
|
'ball-and-stick': import("./representation").StructureRepresentationProvider<{
|
|
52
60
|
includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
53
|
-
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "
|
|
61
|
+
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
54
62
|
sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
55
63
|
sizeAspectRatio: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
56
64
|
visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"element-sphere" | "intra-bond" | "inter-bond">;
|
|
@@ -60,7 +68,7 @@ export declare namespace StructureRepresentationRegistry {
|
|
|
60
68
|
excludeTypes: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
|
|
61
69
|
ignoreHydrogens: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
62
70
|
aromaticBonds: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
63
|
-
multipleBonds: import("../../mol-util/param-definition").ParamDefinition.Select<"
|
|
71
|
+
multipleBonds: import("../../mol-util/param-definition").ParamDefinition.Select<"offset" | "off" | "symmetric">;
|
|
64
72
|
linkScale: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
65
73
|
linkSpacing: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
66
74
|
linkCap: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
@@ -76,7 +84,11 @@ export declare namespace StructureRepresentationRegistry {
|
|
|
76
84
|
ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
77
85
|
xrayShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
78
86
|
alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
79
|
-
quality: import("../../mol-util/param-definition").ParamDefinition.Select<"
|
|
87
|
+
quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
88
|
+
material: import("../../mol-util/param-definition").ParamDefinition.Group<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
|
|
89
|
+
metalness: number;
|
|
90
|
+
roughness: number;
|
|
91
|
+
}>>;
|
|
80
92
|
flipSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
81
93
|
flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
82
94
|
traceOnly: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
@@ -96,7 +108,7 @@ export declare namespace StructureRepresentationRegistry {
|
|
|
96
108
|
dashCap: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
97
109
|
stubCap: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
98
110
|
radialSegments: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
99
|
-
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "
|
|
111
|
+
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
100
112
|
includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
101
113
|
doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
102
114
|
flipSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
@@ -104,7 +116,11 @@ export declare namespace StructureRepresentationRegistry {
|
|
|
104
116
|
ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
105
117
|
xrayShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
106
118
|
alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
107
|
-
quality: import("../../mol-util/param-definition").ParamDefinition.Select<"
|
|
119
|
+
quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
120
|
+
material: import("../../mol-util/param-definition").ParamDefinition.Group<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
|
|
121
|
+
metalness: number;
|
|
122
|
+
roughness: number;
|
|
123
|
+
}>>;
|
|
108
124
|
linkSizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
109
125
|
detail: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
110
126
|
sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
@@ -112,7 +128,7 @@ export declare namespace StructureRepresentationRegistry {
|
|
|
112
128
|
ellipsoid: import("./representation").StructureRepresentationProvider<{
|
|
113
129
|
includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
114
130
|
adjustCylinderLength: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
115
|
-
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "
|
|
131
|
+
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
116
132
|
sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
117
133
|
sizeAspectRatio: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
118
134
|
linkCap: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
@@ -122,7 +138,7 @@ export declare namespace StructureRepresentationRegistry {
|
|
|
122
138
|
excludeTypes: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
|
|
123
139
|
ignoreHydrogens: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
124
140
|
aromaticBonds: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
125
|
-
multipleBonds: import("../../mol-util/param-definition").ParamDefinition.Select<"
|
|
141
|
+
multipleBonds: import("../../mol-util/param-definition").ParamDefinition.Select<"offset" | "off" | "symmetric">;
|
|
126
142
|
linkScale: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
127
143
|
linkSpacing: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
128
144
|
aromaticScale: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
@@ -137,7 +153,11 @@ export declare namespace StructureRepresentationRegistry {
|
|
|
137
153
|
ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
138
154
|
xrayShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
139
155
|
alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
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attachment: import("../../mol-util/param-definition").ParamDefinition.Select<"bottom-left" | "bottom-center" | "bottom-right" | "middle-left" | "middle-center" | "middle-right" | "top-left" | "top-center" | "top-right">;
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@@ -243,9 +275,13 @@ export declare namespace StructureRepresentationRegistry {
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}>, "on">>;
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}>, "on"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "off">>;
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@@ -281,7 +321,7 @@ export declare namespace StructureRepresentationRegistry {
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visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"orientation-ellipsoid-mesh">;
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unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
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@@ -289,24 +329,32 @@ export declare namespace StructureRepresentationRegistry {
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ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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xrayShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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quality: import("../../mol-util/param-definition").ParamDefinition.Select<"
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quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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}, "orientation">;
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point: import("./representation").StructureRepresentationProvider<{
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pointSizeAttenuation: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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ignoreHydrogens: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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traceOnly: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "
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unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
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includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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pointStyle: import("../../mol-util/param-definition").ParamDefinition.Select<"
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pointStyle: import("../../mol-util/param-definition").ParamDefinition.Select<"circle" | "square" | "fuzzy">;
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alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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quality: import("../../mol-util/param-definition").ParamDefinition.Select<"
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quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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material: import("../../mol-util/param-definition").ParamDefinition.Group<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
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}>>;
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}, "point">;
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putty: import("./representation").StructureRepresentationProvider<{
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sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"polymer-gap" | "polymer-tube">;
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radialSegments: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "
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unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
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includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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flipSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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@@ -314,7 +362,11 @@ export declare namespace StructureRepresentationRegistry {
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ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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xrayShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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quality: import("../../mol-util/param-definition").ParamDefinition.Select<"
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+
quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
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material: import("../../mol-util/param-definition").ParamDefinition.Group<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
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metalness: number;
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roughness: number;
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}>>;
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detail: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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linearSegments: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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}, "putty">;
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@@ -324,13 +376,17 @@ export declare namespace StructureRepresentationRegistry {
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ignoreHydrogens: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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traceOnly: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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tryUseImpostor: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
327
|
-
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "
|
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379
|
+
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
328
380
|
includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
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329
381
|
doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
330
382
|
ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
331
383
|
xrayShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
332
384
|
alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
333
|
-
quality: import("../../mol-util/param-definition").ParamDefinition.Select<"
|
|
385
|
+
quality: import("../../mol-util/param-definition").ParamDefinition.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
386
|
+
material: import("../../mol-util/param-definition").ParamDefinition.Group<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
|
|
387
|
+
metalness: number;
|
|
388
|
+
roughness: number;
|
|
389
|
+
}>>;
|
|
334
390
|
flipSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
335
391
|
flatShaded: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
336
392
|
}, "spacefill">;
|
|
@@ -13,7 +13,7 @@ export declare const BackboneParams: {
|
|
|
13
13
|
visuals: PD.MultiSelect<"polymer-gap" | "polymer-backbone-cylinder" | "polymer-backbone-sphere">;
|
|
14
14
|
sizeFactor: PD.Numeric;
|
|
15
15
|
radialSegments: PD.Numeric;
|
|
16
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
16
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
17
17
|
includeParent: PD.BooleanParam;
|
|
18
18
|
doubleSided: PD.BooleanParam;
|
|
19
19
|
flipSided: PD.BooleanParam;
|
|
@@ -21,7 +21,11 @@ export declare const BackboneParams: {
|
|
|
21
21
|
ignoreLight: PD.BooleanParam;
|
|
22
22
|
xrayShaded: PD.BooleanParam;
|
|
23
23
|
alpha: PD.Numeric;
|
|
24
|
-
quality: PD.Select<"
|
|
24
|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
25
|
+
material: PD.Group<PD.Normalize<{
|
|
26
|
+
metalness: number;
|
|
27
|
+
roughness: number;
|
|
28
|
+
}>>;
|
|
25
29
|
tryUseImpostor: PD.BooleanParam;
|
|
26
30
|
detail: PD.Numeric;
|
|
27
31
|
};
|
|
@@ -31,7 +35,7 @@ export declare function getBackboneParams(ctx: ThemeRegistryContext, structure:
|
|
|
31
35
|
visuals: PD.MultiSelect<"polymer-gap" | "polymer-backbone-cylinder" | "polymer-backbone-sphere">;
|
|
32
36
|
sizeFactor: PD.Numeric;
|
|
33
37
|
radialSegments: PD.Numeric;
|
|
34
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
38
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
35
39
|
includeParent: PD.BooleanParam;
|
|
36
40
|
doubleSided: PD.BooleanParam;
|
|
37
41
|
flipSided: PD.BooleanParam;
|
|
@@ -39,7 +43,11 @@ export declare function getBackboneParams(ctx: ThemeRegistryContext, structure:
|
|
|
39
43
|
ignoreLight: PD.BooleanParam;
|
|
40
44
|
xrayShaded: PD.BooleanParam;
|
|
41
45
|
alpha: PD.Numeric;
|
|
42
|
-
quality: PD.Select<"
|
|
46
|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
47
|
+
material: PD.Group<PD.Normalize<{
|
|
48
|
+
metalness: number;
|
|
49
|
+
roughness: number;
|
|
50
|
+
}>>;
|
|
43
51
|
tryUseImpostor: PD.BooleanParam;
|
|
44
52
|
detail: PD.Numeric;
|
|
45
53
|
};
|
|
@@ -50,7 +58,7 @@ export declare const BackboneRepresentationProvider: StructureRepresentationProv
|
|
|
50
58
|
visuals: PD.MultiSelect<"polymer-gap" | "polymer-backbone-cylinder" | "polymer-backbone-sphere">;
|
|
51
59
|
sizeFactor: PD.Numeric;
|
|
52
60
|
radialSegments: PD.Numeric;
|
|
53
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
61
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
54
62
|
includeParent: PD.BooleanParam;
|
|
55
63
|
doubleSided: PD.BooleanParam;
|
|
56
64
|
flipSided: PD.BooleanParam;
|
|
@@ -58,7 +66,11 @@ export declare const BackboneRepresentationProvider: StructureRepresentationProv
|
|
|
58
66
|
ignoreLight: PD.BooleanParam;
|
|
59
67
|
xrayShaded: PD.BooleanParam;
|
|
60
68
|
alpha: PD.Numeric;
|
|
61
|
-
quality: PD.Select<"
|
|
69
|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
70
|
+
material: PD.Group<PD.Normalize<{
|
|
71
|
+
metalness: number;
|
|
72
|
+
roughness: number;
|
|
73
|
+
}>>;
|
|
62
74
|
tryUseImpostor: PD.BooleanParam;
|
|
63
75
|
detail: PD.Numeric;
|
|
64
76
|
}, "backbone">;
|