grnsight 6.0.4 → 7.1.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/.eslintrc.yml +4 -4
- package/database/README.md +224 -79
- package/database/constants.py +42 -0
- package/database/expression-database/README.md +2 -2
- package/database/expression-database/schema.sql +14 -14
- package/database/expression-database/scripts/loader.py +6 -6
- package/database/filter_update.py +168 -0
- package/database/grnsettings-database/README.md +52 -0
- package/database/grnsettings-database/schema.sql +4 -0
- package/database/loader.py +30 -0
- package/database/loader_update.py +36 -0
- package/database/network-database/README.md +36 -4
- package/database/network-database/schema.sql +7 -7
- package/database/network-database/scripts/generate_network.py +16 -24
- package/database/network-database/scripts/generate_new_network_version.py +216 -0
- package/database/protein-protein-database/README.md +71 -0
- package/database/protein-protein-database/schema.sql +37 -0
- package/database/protein-protein-database/scripts/generate_protein_network.py +227 -0
- package/database/protein-protein-database/scripts/remove_duplicates.sh +4 -0
- package/database/utils.py +418 -0
- package/package.json +2 -2
- package/server/app.js +2 -0
- package/server/config/config.js +4 -4
- package/server/controllers/additional-sheet-parser.js +2 -1
- package/server/controllers/constants.js +5 -0
- package/server/controllers/custom-workbook-controller.js +8 -6
- package/server/controllers/demo-workbooks.js +1460 -4
- package/server/controllers/export-constants.js +3 -2
- package/server/controllers/exporters/sif.js +6 -1
- package/server/controllers/exporters/xlsx.js +8 -3
- package/server/controllers/expression-sheet-parser.js +0 -6
- package/server/controllers/grnsettings-database-controller.js +17 -0
- package/server/controllers/importers/sif.js +29 -11
- package/server/controllers/network-database-controller.js +2 -2
- package/server/controllers/network-sheet-parser.js +54 -12
- package/server/controllers/protein-database-controller.js +18 -0
- package/server/controllers/sif-constants.js +4 -4
- package/server/controllers/spreadsheet-controller.js +44 -1
- package/server/controllers/workbook-constants.js +21 -4
- package/server/dals/expression-dal.js +8 -7
- package/server/dals/grnsetting-dal.js +49 -0
- package/server/dals/network-dal.js +13 -12
- package/server/dals/protein-dal.js +106 -0
- package/test/export-tests.js +136 -9
- package/test/import-sif-tests.js +54 -13
- package/test/test.js +1 -1
- package/test-files/additional-sheet-test-files/optimization-parameters-default.xlsx +0 -0
- package/test-files/demo-files/18_proteins_81_edges_PPI.xlsx +0 -0
- package/test-files/expression-data-test-sheets/expression_sheet_missing_data_ok_export_exact.xlsx +0 -0
- package/web-client/config/config.js +4 -4
- package/web-client/public/js/api/grnsight-api.js +72 -56
- package/web-client/public/js/constants.js +26 -12
- package/web-client/public/js/generateNetwork.js +173 -67
- package/web-client/public/js/graph.js +420 -150
- package/web-client/public/js/grnsight.js +25 -4
- package/web-client/public/js/grnstate.js +3 -1
- package/web-client/public/js/iframe-coordination.js +3 -3
- package/web-client/public/js/setup-handlers.js +28 -32
- package/web-client/public/js/setup-load-and-import-handlers.js +196 -170
- package/web-client/public/js/update-app.js +84 -17
- package/web-client/public/js/upload.js +193 -157
- package/web-client/public/lib/bootstrap.file-input/bootstrap.file-input.js +0 -1
- package/web-client/public/stylesheets/grnsight.styl +40 -16
- package/web-client/views/components/demo.pug +7 -5
- package/web-client/views/upload.pug +63 -49
- package/.bundle/config +0 -3
- package/GRNsight - Beta.html +0 -194
- package/Gemfile.lock +0 -259
- package/_gh_pages/about.html +0 -807
- package/_gh_pages/assets/css/bootstrap.min.css +0 -10
- package/_gh_pages/assets/css/footer.css +0 -3
- package/_gh_pages/assets/css/main.css +0 -363
- package/_gh_pages/assets/images/21-genes_31-edges_Schade-data_estimation_output_binary-no-targetless-genes_sif.png +0 -0
- package/_gh_pages/assets/images/21-genes_31-edges_Schade-data_estimation_output_binary_sif.png +0 -0
- package/_gh_pages/assets/images/21-genes_31-edges_Schade-data_graphml_3-edges-and-footer.png +0 -0
- package/_gh_pages/assets/images/21-genes_31-edges_Schade-data_graphml_header-and-3-nodes.png +0 -0
- package/_gh_pages/assets/images/21-genes_31-edges_Schade-data_graphml_output_3-edges-and-footer.png +0 -0
- package/_gh_pages/assets/images/21-genes_31-edges_Schade-data_graphml_output_header-and-3-nodes.png +0 -0
- package/_gh_pages/assets/images/21-genes_31-edges_Schade-data_input_binary-no-targetless-genes_sif.png +0 -0
- package/_gh_pages/assets/images/21-genes_31-edges_Schade-data_input_binary_sif.png +0 -0
- package/_gh_pages/assets/images/21-genes_31-edges_Schade-data_input_concatenated-no-targetless-genes_sif.png +0 -0
- package/_gh_pages/assets/images/21-genes_31-edges_Schade-data_input_concatenated_sif.png +0 -0
- package/_gh_pages/assets/images/Carrillo_Roque_LMU_Symposium_2015.pptx +0 -0
- package/_gh_pages/assets/images/Choe-Shin_CMSI402-poster-session_20180430.jpg +0 -0
- package/_gh_pages/assets/images/Choe_SCCUR_2017.jpg +0 -0
- package/_gh_pages/assets/images/Dahlquist-BMB-2015-Fig1.jpg +0 -0
- package/_gh_pages/assets/images/Dahlquist-BMB-2015-Fig8.jpg +0 -0
- package/_gh_pages/assets/images/Dahlquist-Choe-Shin_CMSI402-poster-session_20180430.jpg +0 -0
- package/_gh_pages/assets/images/Demo-3-auto-layout.jpg +0 -0
- package/_gh_pages/assets/images/Demo-3-paper-layout.jpg +0 -0
- package/_gh_pages/assets/images/Demo-4-auto-layout.jpg +0 -0
- package/_gh_pages/assets/images/Demo-4-paper-layout.jpg +0 -0
- package/_gh_pages/assets/images/Dionisio-Dahlquist_GRNsight-shades_20170506.jpg +0 -0
- package/_gh_pages/assets/images/GRNsight_logo_20140710_main.jpg +0 -0
- package/_gh_pages/assets/images/GRNsight_logo_20140710_main_resized.jpg +0 -0
- package/_gh_pages/assets/images/GRNsight_logo_20140710_rollover.jpg +0 -0
- package/_gh_pages/assets/images/GRNsight_logo_20140710_rollover_resized.jpg +0 -0
- package/_gh_pages/assets/images/Johnson_Williams_LMU_Symposium_2015.pptx +0 -0
- package/_gh_pages/assets/images/Klein_Samdarshi_TriBeta_2018_20180317.jpg +0 -0
- package/_gh_pages/assets/images/LMULogoHQ2.png +0 -0
- package/_gh_pages/assets/images/LMUSymposium_Group_20150321-2.jpg +0 -0
- package/_gh_pages/assets/images/LMUSymposium_Group_20150321-2_resized.jpg +0 -0
- package/_gh_pages/assets/images/Sample_network_optimized_weights_worksheet.jpg +0 -0
- package/_gh_pages/assets/images/Sample_network_worksheet.jpg +0 -0
- package/_gh_pages/assets/images/Shin_SCCUR_2017.jpg +0 -0
- package/_gh_pages/assets/images/demo-3_network-sheet.png +0 -0
- package/_gh_pages/assets/images/demo-4_network-optimized-weights-sheet.png +0 -0
- package/_gh_pages/assets/images/gene-pages-0.png +0 -0
- package/_gh_pages/assets/images/gene-pages-1.png +0 -0
- package/_gh_pages/assets/images/gene-pages-2.png +0 -0
- package/_gh_pages/assets/images/gene-pages-3.png +0 -0
- package/_gh_pages/assets/images/grnsight2020.png +0 -0
- package/_gh_pages/assets/images/lmu logo.gif +0 -0
- package/_gh_pages/assets/images/v3demo2-grid+nodecoloring.png +0 -0
- package/_gh_pages/assets/images/v3demo2-nodecoloring.png +0 -0
- package/_gh_pages/assets/images/v3demo2.png +0 -0
- package/_gh_pages/assets/js/ga-report.js +0 -35
- package/_gh_pages/assets/js/iframeResizer.min.js +0 -9
- package/_gh_pages/assets/js/main.js +0 -132
- package/_gh_pages/beta.html +0 -144
- package/_gh_pages/contact.html +0 -178
- package/_gh_pages/coverage/coverage.json +0 -1
- package/_gh_pages/coverage/coverage.raw.json +0 -1
- package/_gh_pages/coverage/lcov-report/base.css +0 -223
- package/_gh_pages/coverage/lcov-report/block-navigation.js +0 -63
- package/_gh_pages/coverage/lcov-report/controllers/additional-sheet-parser.js.html +0 -330
- package/_gh_pages/coverage/lcov-report/controllers/constants.js.html +0 -243
- package/_gh_pages/coverage/lcov-report/controllers/export-controller.js.html +0 -285
- package/_gh_pages/coverage/lcov-report/controllers/exporters/graphml.js.html +0 -405
- package/_gh_pages/coverage/lcov-report/controllers/exporters/index.html +0 -110
- package/_gh_pages/coverage/lcov-report/controllers/exporters/sif.js.html +0 -150
- package/_gh_pages/coverage/lcov-report/controllers/helpers.js.html +0 -114
- package/_gh_pages/coverage/lcov-report/controllers/import-controller.js.html +0 -233
- package/_gh_pages/coverage/lcov-report/controllers/importers/graphml.js.html +0 -716
- package/_gh_pages/coverage/lcov-report/controllers/importers/index.html +0 -106
- package/_gh_pages/coverage/lcov-report/controllers/importers/sif.js.html +0 -488
- package/_gh_pages/coverage/lcov-report/controllers/index.html +0 -162
- package/_gh_pages/coverage/lcov-report/controllers/semantic-checker.js.html +0 -810
- package/_gh_pages/coverage/lcov-report/controllers/spreadsheet-controller.js.html +0 -1779
- package/_gh_pages/coverage/lcov-report/index.html +0 -136
- package/_gh_pages/coverage/lcov-report/prettify.css +0 -1
- package/_gh_pages/coverage/lcov-report/prettify.js +0 -1
- package/_gh_pages/coverage/lcov-report/server/controllers/additional-sheet-parser.js.html +0 -330
- package/_gh_pages/coverage/lcov-report/server/controllers/constants.js.html +0 -243
- package/_gh_pages/coverage/lcov-report/server/controllers/export-controller.js.html +0 -285
- package/_gh_pages/coverage/lcov-report/server/controllers/exporters/graphml.js.html +0 -405
- package/_gh_pages/coverage/lcov-report/server/controllers/exporters/index.html +0 -110
- package/_gh_pages/coverage/lcov-report/server/controllers/exporters/sif.js.html +0 -150
- package/_gh_pages/coverage/lcov-report/server/controllers/graphml-constants.js.html +0 -585
- package/_gh_pages/coverage/lcov-report/server/controllers/helpers.js.html +0 -114
- package/_gh_pages/coverage/lcov-report/server/controllers/import-controller.js.html +0 -237
- package/_gh_pages/coverage/lcov-report/server/controllers/importers/graphml.js.html +0 -585
- package/_gh_pages/coverage/lcov-report/server/controllers/importers/index.html +0 -110
- package/_gh_pages/coverage/lcov-report/server/controllers/importers/sif.js.html +0 -492
- package/_gh_pages/coverage/lcov-report/server/controllers/index.html +0 -188
- package/_gh_pages/coverage/lcov-report/server/controllers/semantic-checker.js.html +0 -810
- package/_gh_pages/coverage/lcov-report/server/controllers/spreadsheet-controller.js.html +0 -1779
- package/_gh_pages/coverage/lcov-report/sort-arrow-sprite.png +0 -0
- package/_gh_pages/coverage/lcov-report/sorter.js +0 -158
- package/_gh_pages/coverage/lcov-report/web-client/public/js/grnstate.js.html +0 -225
- package/_gh_pages/coverage/lcov-report/web-client/public/js/index.html +0 -97
- package/_gh_pages/coverage/lcov.info +0 -49
- package/_gh_pages/documentation.html +0 -1132
- package/_gh_pages/documents/abstracts/SIGGRAPH 2017 Abstract/siggraph-abstract-review.aux +0 -47
- package/_gh_pages/documents/abstracts/SIGGRAPH 2017 Abstract/siggraph-abstract-review.bbl +0 -73
- package/_gh_pages/documents/abstracts/SIGGRAPH 2017 Abstract/siggraph-abstract-review.blg +0 -52
- package/_gh_pages/documents/abstracts/SIGGRAPH 2017 Abstract/siggraph-abstract-review.log +0 -1056
- package/_gh_pages/documents/abstracts/SIGGRAPH 2017 Abstract/siggraph-abstract-review.out +0 -7
- package/_gh_pages/documents/abstracts/SIGGRAPH 2017 Abstract/siggraph-abstract-review.synctex.gz +0 -0
- package/_gh_pages/documents/manuscripts/peerj-computerscience-2016/revisions/GRNsight_PeerJ-CS_manuscript_2016_text-only_revised-Dondi.docx +0 -0
- package/_gh_pages/encryption/server.cert +0 -21
- package/_gh_pages/encryption/server.key +0 -28
- package/_gh_pages/favicon.ico +0 -0
- package/_gh_pages/googlea1a858c5bc91c87e.html +0 -1
- package/_gh_pages/index.html +0 -163
- package/_gh_pages/links.html +0 -177
- package/_gh_pages/news.html +0 -367
- package/_gh_pages/onlyfooter.html +0 -78
- package/_gh_pages/onlyheader.html +0 -64
- package/_gh_pages/onlysidebar.html +0 -73
- package/_gh_pages/package-lock.json +0 -14048
- package/_gh_pages/params.json +0 -1
- package/_gh_pages/people.html +0 -260
- package/_gh_pages/privacy.html +0 -147
- package/_gh_pages/publications.html +0 -378
- package/_gh_pages/robots.txt +0 -1
- package/_gh_pages/server/API Project-7d45e9f24a96.p12 +0 -0
- package/_gh_pages/server/grnmap.pem +0 -31
- package/_gh_pages/server/grnsight.pem +0 -19
- package/_gh_pages/sitemap.xml +0 -174
- package/_gh_pages/test-files/import-samples/attributes.graphml +0 -40
- package/_gh_pages/test-files/import-samples/port.graphml +0 -32
- package/_gh_pages/test-files/import-samples/simple.graphml +0 -31
- package/_gh_pages/web-client/public/js/grnsight.min.js +0 -2347
- package/_gh_pages/web-client/public/stylesheets/grnsight.css +0 -443
- package/coverage/coverage.json +0 -1
- package/coverage/coverage.raw.json +0 -1
- package/coverage/lcov-report/base.css +0 -223
- package/coverage/lcov-report/block-navigation.js +0 -63
- package/coverage/lcov-report/controllers/additional-sheet-parser.js.html +0 -330
- package/coverage/lcov-report/controllers/constants.js.html +0 -243
- package/coverage/lcov-report/controllers/export-controller.js.html +0 -285
- package/coverage/lcov-report/controllers/exporters/graphml.js.html +0 -405
- package/coverage/lcov-report/controllers/exporters/index.html +0 -110
- package/coverage/lcov-report/controllers/exporters/sif.js.html +0 -150
- package/coverage/lcov-report/controllers/helpers.js.html +0 -114
- package/coverage/lcov-report/controllers/import-controller.js.html +0 -233
- package/coverage/lcov-report/controllers/importers/graphml.js.html +0 -716
- package/coverage/lcov-report/controllers/importers/index.html +0 -106
- package/coverage/lcov-report/controllers/importers/sif.js.html +0 -488
- package/coverage/lcov-report/controllers/index.html +0 -162
- package/coverage/lcov-report/controllers/semantic-checker.js.html +0 -810
- package/coverage/lcov-report/controllers/spreadsheet-controller.js.html +0 -1779
- package/coverage/lcov-report/index.html +0 -136
- package/coverage/lcov-report/prettify.css +0 -1
- package/coverage/lcov-report/prettify.js +0 -1
- package/coverage/lcov-report/server/controllers/additional-sheet-parser.js.html +0 -330
- package/coverage/lcov-report/server/controllers/constants.js.html +0 -243
- package/coverage/lcov-report/server/controllers/export-controller.js.html +0 -285
- package/coverage/lcov-report/server/controllers/exporters/graphml.js.html +0 -405
- package/coverage/lcov-report/server/controllers/exporters/index.html +0 -110
- package/coverage/lcov-report/server/controllers/exporters/sif.js.html +0 -150
- package/coverage/lcov-report/server/controllers/graphml-constants.js.html +0 -585
- package/coverage/lcov-report/server/controllers/helpers.js.html +0 -114
- package/coverage/lcov-report/server/controllers/import-controller.js.html +0 -237
- package/coverage/lcov-report/server/controllers/importers/graphml.js.html +0 -585
- package/coverage/lcov-report/server/controllers/importers/index.html +0 -110
- package/coverage/lcov-report/server/controllers/importers/sif.js.html +0 -492
- package/coverage/lcov-report/server/controllers/index.html +0 -188
- package/coverage/lcov-report/server/controllers/semantic-checker.js.html +0 -810
- package/coverage/lcov-report/server/controllers/spreadsheet-controller.js.html +0 -1779
- package/coverage/lcov-report/sort-arrow-sprite.png +0 -0
- package/coverage/lcov-report/sorter.js +0 -158
- package/coverage/lcov-report/web-client/public/js/grnstate.js.html +0 -225
- package/coverage/lcov-report/web-client/public/js/index.html +0 -97
- package/coverage/lcov.info +0 -1952
- package/database/network-database/scripts/filter_genes.py +0 -76
- package/database/network-database/scripts/loader.py +0 -79
- package/documents/abstracts/SIGGRAPH 2017 Abstract/siggraph-abstract-review.aux +0 -47
- package/documents/abstracts/SIGGRAPH 2017 Abstract/siggraph-abstract-review.bbl +0 -73
- package/documents/abstracts/SIGGRAPH 2017 Abstract/siggraph-abstract-review.blg +0 -52
- package/documents/abstracts/SIGGRAPH 2017 Abstract/siggraph-abstract-review.log +0 -1056
- package/documents/abstracts/SIGGRAPH 2017 Abstract/siggraph-abstract-review.out +0 -7
- package/documents/abstracts/SIGGRAPH 2017 Abstract/siggraph-abstract-review.synctex.gz +0 -0
- package/documents/manuscripts/peerj-computerscience-2016/revisions/GRNsight_PeerJ-CS_manuscript_2016_text-only_revised-Dondi.docx +0 -0
- package/encryption/server.cert +0 -21
- package/encryption/server.key +0 -28
- package/gdb/PG_VERSION +0 -1
- package/gdb/base/1/112 +0 -0
- package/gdb/base/1/113 +0 -0
- package/gdb/base/1/1247 +0 -0
- package/gdb/base/1/1247_fsm +0 -0
- package/gdb/base/1/1247_vm +0 -0
- package/gdb/base/1/1249 +0 -0
- package/gdb/base/1/1249_fsm +0 -0
- package/gdb/base/1/1249_vm +0 -0
- package/gdb/base/1/1255 +0 -0
- package/gdb/base/1/1255_fsm +0 -0
- package/gdb/base/1/1255_vm +0 -0
- package/gdb/base/1/1259 +0 -0
- package/gdb/base/1/1259_fsm +0 -0
- package/gdb/base/1/1259_vm +0 -0
- package/gdb/base/1/13852 +0 -0
- package/gdb/base/1/13852_fsm +0 -0
- package/gdb/base/1/13852_vm +0 -0
- package/gdb/base/1/13855 +0 -0
- package/gdb/base/1/13856 +0 -0
- package/gdb/base/1/13857 +0 -0
- package/gdb/base/1/13857_fsm +0 -0
- package/gdb/base/1/13857_vm +0 -0
- package/gdb/base/1/13860 +0 -0
- package/gdb/base/1/13861 +0 -0
- package/gdb/base/1/13862 +0 -0
- package/gdb/base/1/13862_fsm +0 -0
- package/gdb/base/1/13862_vm +0 -0
- package/gdb/base/1/13865 +0 -0
- package/gdb/base/1/13866 +0 -0
- package/gdb/base/1/13867 +0 -0
- package/gdb/base/1/13867_fsm +0 -0
- package/gdb/base/1/13867_vm +0 -0
- package/gdb/base/1/13870 +0 -0
- package/gdb/base/1/13871 +0 -0
- package/gdb/base/1/1417 +0 -0
- package/gdb/base/1/1418 +0 -0
- package/gdb/base/1/174 +0 -0
- package/gdb/base/1/175 +0 -0
- package/gdb/base/1/2187 +0 -0
- package/gdb/base/1/2224 +0 -0
- package/gdb/base/1/2228 +0 -0
- package/gdb/base/1/2328 +0 -0
- package/gdb/base/1/2336 +0 -0
- package/gdb/base/1/2337 +0 -0
- package/gdb/base/1/2579 +0 -0
- package/gdb/base/1/2600 +0 -0
- package/gdb/base/1/2600_fsm +0 -0
- package/gdb/base/1/2600_vm +0 -0
- package/gdb/base/1/2601 +0 -0
- package/gdb/base/1/2601_fsm +0 -0
- package/gdb/base/1/2601_vm +0 -0
- package/gdb/base/1/2602 +0 -0
- package/gdb/base/1/2602_fsm +0 -0
- package/gdb/base/1/2602_vm +0 -0
- package/gdb/base/1/2603 +0 -0
- package/gdb/base/1/2603_fsm +0 -0
- package/gdb/base/1/2603_vm +0 -0
- package/gdb/base/1/2604 +0 -0
- package/gdb/base/1/2605 +0 -0
- package/gdb/base/1/2605_fsm +0 -0
- package/gdb/base/1/2605_vm +0 -0
- package/gdb/base/1/2606 +0 -0
- package/gdb/base/1/2606_fsm +0 -0
- package/gdb/base/1/2606_vm +0 -0
- package/gdb/base/1/2607 +0 -0
- package/gdb/base/1/2607_fsm +0 -0
- package/gdb/base/1/2607_vm +0 -0
- package/gdb/base/1/2608 +0 -0
- package/gdb/base/1/2608_fsm +0 -0
- package/gdb/base/1/2608_vm +0 -0
- package/gdb/base/1/2609 +0 -0
- package/gdb/base/1/2609_fsm +0 -0
- package/gdb/base/1/2609_vm +0 -0
- package/gdb/base/1/2610 +0 -0
- package/gdb/base/1/2610_fsm +0 -0
- package/gdb/base/1/2610_vm +0 -0
- package/gdb/base/1/2611 +0 -0
- package/gdb/base/1/2612 +0 -0
- package/gdb/base/1/2612_fsm +0 -0
- package/gdb/base/1/2612_vm +0 -0
- package/gdb/base/1/2613 +0 -0
- package/gdb/base/1/2615 +0 -0
- package/gdb/base/1/2615_fsm +0 -0
- package/gdb/base/1/2615_vm +0 -0
- package/gdb/base/1/2616 +0 -0
- package/gdb/base/1/2616_fsm +0 -0
- package/gdb/base/1/2616_vm +0 -0
- package/gdb/base/1/2617 +0 -0
- package/gdb/base/1/2617_fsm +0 -0
- package/gdb/base/1/2617_vm +0 -0
- package/gdb/base/1/2618 +0 -0
- package/gdb/base/1/2618_fsm +0 -0
- package/gdb/base/1/2618_vm +0 -0
- package/gdb/base/1/2619 +0 -0
- package/gdb/base/1/2619_fsm +0 -0
- package/gdb/base/1/2619_vm +0 -0
- package/gdb/base/1/2620 +0 -0
- package/gdb/base/1/2650 +0 -0
- package/gdb/base/1/2651 +0 -0
- package/gdb/base/1/2652 +0 -0
- package/gdb/base/1/2653 +0 -0
- package/gdb/base/1/2654 +0 -0
- package/gdb/base/1/2655 +0 -0
- package/gdb/base/1/2656 +0 -0
- package/gdb/base/1/2657 +0 -0
- package/gdb/base/1/2658 +0 -0
- package/gdb/base/1/2659 +0 -0
- package/gdb/base/1/2660 +0 -0
- package/gdb/base/1/2661 +0 -0
- package/gdb/base/1/2662 +0 -0
- package/gdb/base/1/2663 +0 -0
- package/gdb/base/1/2664 +0 -0
- package/gdb/base/1/2665 +0 -0
- package/gdb/base/1/2666 +0 -0
- package/gdb/base/1/2667 +0 -0
- package/gdb/base/1/2668 +0 -0
- package/gdb/base/1/2669 +0 -0
- package/gdb/base/1/2670 +0 -0
- package/gdb/base/1/2673 +0 -0
- package/gdb/base/1/2673_fsm +0 -0
- package/gdb/base/1/2674 +0 -0
- package/gdb/base/1/2674_fsm +0 -0
- package/gdb/base/1/2675 +0 -0
- package/gdb/base/1/2678 +0 -0
- package/gdb/base/1/2679 +0 -0
- package/gdb/base/1/2680 +0 -0
- package/gdb/base/1/2681 +0 -0
- package/gdb/base/1/2682 +0 -0
- package/gdb/base/1/2683 +0 -0
- package/gdb/base/1/2684 +0 -0
- package/gdb/base/1/2685 +0 -0
- package/gdb/base/1/2686 +0 -0
- package/gdb/base/1/2687 +0 -0
- package/gdb/base/1/2688 +0 -0
- package/gdb/base/1/2689 +0 -0
- package/gdb/base/1/2690 +0 -0
- package/gdb/base/1/2691 +0 -0
- package/gdb/base/1/2692 +0 -0
- package/gdb/base/1/2693 +0 -0
- package/gdb/base/1/2696 +0 -0
- package/gdb/base/1/2699 +0 -0
- package/gdb/base/1/2701 +0 -0
- package/gdb/base/1/2702 +0 -0
- package/gdb/base/1/2703 +0 -0
- package/gdb/base/1/2704 +0 -0
- package/gdb/base/1/2753 +0 -0
- package/gdb/base/1/2753_fsm +0 -0
- package/gdb/base/1/2753_vm +0 -0
- package/gdb/base/1/2754 +0 -0
- package/gdb/base/1/2755 +0 -0
- package/gdb/base/1/2756 +0 -0
- package/gdb/base/1/2757 +0 -0
- package/gdb/base/1/2830 +0 -0
- package/gdb/base/1/2831 +0 -0
- package/gdb/base/1/2832 +0 -0
- package/gdb/base/1/2833 +0 -0
- package/gdb/base/1/2834 +0 -0
- package/gdb/base/1/2835 +0 -0
- package/gdb/base/1/2836 +0 -0
- package/gdb/base/1/2836_fsm +0 -0
- package/gdb/base/1/2836_vm +0 -0
- package/gdb/base/1/2837 +0 -0
- package/gdb/base/1/2838 +0 -0
- package/gdb/base/1/2838_fsm +0 -0
- package/gdb/base/1/2838_vm +0 -0
- package/gdb/base/1/2839 +0 -0
- package/gdb/base/1/2840 +0 -0
- package/gdb/base/1/2840_fsm +0 -0
- package/gdb/base/1/2840_vm +0 -0
- package/gdb/base/1/2841 +0 -0
- package/gdb/base/1/2995 +0 -0
- package/gdb/base/1/2996 +0 -0
- package/gdb/base/1/3079 +0 -0
- package/gdb/base/1/3079_fsm +0 -0
- package/gdb/base/1/3079_vm +0 -0
- package/gdb/base/1/3080 +0 -0
- package/gdb/base/1/3081 +0 -0
- package/gdb/base/1/3085 +0 -0
- package/gdb/base/1/3118 +0 -0
- package/gdb/base/1/3119 +0 -0
- package/gdb/base/1/3164 +0 -0
- package/gdb/base/1/3256 +0 -0
- package/gdb/base/1/3257 +0 -0
- package/gdb/base/1/3258 +0 -0
- package/gdb/base/1/3350 +0 -0
- package/gdb/base/1/3351 +0 -0
- package/gdb/base/1/3379 +0 -0
- package/gdb/base/1/3380 +0 -0
- package/gdb/base/1/3381 +0 -0
- package/gdb/base/1/3394 +0 -0
- package/gdb/base/1/3394_fsm +0 -0
- package/gdb/base/1/3394_vm +0 -0
- package/gdb/base/1/3395 +0 -0
- package/gdb/base/1/3429 +0 -0
- package/gdb/base/1/3430 +0 -0
- package/gdb/base/1/3431 +0 -0
- package/gdb/base/1/3433 +0 -0
- package/gdb/base/1/3439 +0 -0
- package/gdb/base/1/3440 +0 -0
- package/gdb/base/1/3455 +0 -0
- package/gdb/base/1/3456 +0 -0
- package/gdb/base/1/3456_fsm +0 -0
- package/gdb/base/1/3456_vm +0 -0
- package/gdb/base/1/3466 +0 -0
- package/gdb/base/1/3467 +0 -0
- package/gdb/base/1/3468 +0 -0
- package/gdb/base/1/3501 +0 -0
- package/gdb/base/1/3502 +0 -0
- package/gdb/base/1/3503 +0 -0
- package/gdb/base/1/3534 +0 -0
- package/gdb/base/1/3541 +0 -0
- package/gdb/base/1/3541_fsm +0 -0
- package/gdb/base/1/3541_vm +0 -0
- package/gdb/base/1/3542 +0 -0
- package/gdb/base/1/3574 +0 -0
- package/gdb/base/1/3575 +0 -0
- package/gdb/base/1/3576 +0 -0
- package/gdb/base/1/3596 +0 -0
- package/gdb/base/1/3597 +0 -0
- package/gdb/base/1/3598 +0 -0
- package/gdb/base/1/3599 +0 -0
- package/gdb/base/1/3600 +0 -0
- package/gdb/base/1/3600_fsm +0 -0
- package/gdb/base/1/3600_vm +0 -0
- package/gdb/base/1/3601 +0 -0
- package/gdb/base/1/3601_fsm +0 -0
- package/gdb/base/1/3601_vm +0 -0
- package/gdb/base/1/3602 +0 -0
- package/gdb/base/1/3602_fsm +0 -0
- package/gdb/base/1/3602_vm +0 -0
- package/gdb/base/1/3603 +0 -0
- package/gdb/base/1/3603_fsm +0 -0
- package/gdb/base/1/3603_vm +0 -0
- package/gdb/base/1/3604 +0 -0
- package/gdb/base/1/3605 +0 -0
- package/gdb/base/1/3606 +0 -0
- package/gdb/base/1/3607 +0 -0
- package/gdb/base/1/3608 +0 -0
- package/gdb/base/1/3609 +0 -0
- package/gdb/base/1/3712 +0 -0
- package/gdb/base/1/3764 +0 -0
- package/gdb/base/1/3764_fsm +0 -0
- package/gdb/base/1/3764_vm +0 -0
- package/gdb/base/1/3766 +0 -0
- package/gdb/base/1/3767 +0 -0
- package/gdb/base/1/3997 +0 -0
- package/gdb/base/1/4143 +0 -0
- package/gdb/base/1/4144 +0 -0
- package/gdb/base/1/4145 +0 -0
- package/gdb/base/1/4146 +0 -0
- package/gdb/base/1/4147 +0 -0
- package/gdb/base/1/4148 +0 -0
- package/gdb/base/1/4149 +0 -0
- package/gdb/base/1/4150 +0 -0
- package/gdb/base/1/4151 +0 -0
- package/gdb/base/1/4152 +0 -0
- package/gdb/base/1/4153 +0 -0
- package/gdb/base/1/4154 +0 -0
- package/gdb/base/1/4155 +0 -0
- package/gdb/base/1/4156 +0 -0
- package/gdb/base/1/4157 +0 -0
- package/gdb/base/1/4158 +0 -0
- package/gdb/base/1/4159 +0 -0
- package/gdb/base/1/4160 +0 -0
- package/gdb/base/1/4163 +0 -0
- package/gdb/base/1/4164 +0 -0
- package/gdb/base/1/4165 +0 -0
- package/gdb/base/1/4166 +0 -0
- package/gdb/base/1/4167 +0 -0
- package/gdb/base/1/4168 +0 -0
- package/gdb/base/1/4169 +0 -0
- package/gdb/base/1/4170 +0 -0
- package/gdb/base/1/4171 +0 -0
- package/gdb/base/1/4172 +0 -0
- package/gdb/base/1/4173 +0 -0
- package/gdb/base/1/4174 +0 -0
- package/gdb/base/1/5002 +0 -0
- package/gdb/base/1/548 +0 -0
- package/gdb/base/1/549 +0 -0
- package/gdb/base/1/6102 +0 -0
- package/gdb/base/1/6104 +0 -0
- package/gdb/base/1/6106 +0 -0
- package/gdb/base/1/6110 +0 -0
- package/gdb/base/1/6111 +0 -0
- package/gdb/base/1/6112 +0 -0
- package/gdb/base/1/6113 +0 -0
- package/gdb/base/1/6117 +0 -0
- package/gdb/base/1/6175 +0 -0
- package/gdb/base/1/6176 +0 -0
- package/gdb/base/1/826 +0 -0
- package/gdb/base/1/827 +0 -0
- package/gdb/base/1/828 +0 -0
- package/gdb/base/1/PG_VERSION +0 -1
- package/gdb/base/1/pg_filenode.map +0 -0
- package/gdb/base/14033/112 +0 -0
- package/gdb/base/14033/113 +0 -0
- package/gdb/base/14033/1247 +0 -0
- package/gdb/base/14033/1247_fsm +0 -0
- package/gdb/base/14033/1247_vm +0 -0
- package/gdb/base/14033/1249 +0 -0
- package/gdb/base/14033/1249_fsm +0 -0
- package/gdb/base/14033/1249_vm +0 -0
- package/gdb/base/14033/1255 +0 -0
- package/gdb/base/14033/1255_fsm +0 -0
- package/gdb/base/14033/1255_vm +0 -0
- package/gdb/base/14033/1259 +0 -0
- package/gdb/base/14033/1259_fsm +0 -0
- package/gdb/base/14033/1259_vm +0 -0
- package/gdb/base/14033/13852 +0 -0
- package/gdb/base/14033/13852_fsm +0 -0
- package/gdb/base/14033/13852_vm +0 -0
- package/gdb/base/14033/13855 +0 -0
- package/gdb/base/14033/13856 +0 -0
- package/gdb/base/14033/13857 +0 -0
- package/gdb/base/14033/13857_fsm +0 -0
- package/gdb/base/14033/13857_vm +0 -0
- package/gdb/base/14033/13860 +0 -0
- package/gdb/base/14033/13861 +0 -0
- package/gdb/base/14033/13862 +0 -0
- package/gdb/base/14033/13862_fsm +0 -0
- package/gdb/base/14033/13862_vm +0 -0
- package/gdb/base/14033/13865 +0 -0
- package/gdb/base/14033/13866 +0 -0
- package/gdb/base/14033/13867 +0 -0
- package/gdb/base/14033/13867_fsm +0 -0
- package/gdb/base/14033/13867_vm +0 -0
- package/gdb/base/14033/13870 +0 -0
- package/gdb/base/14033/13871 +0 -0
- package/gdb/base/14033/1417 +0 -0
- package/gdb/base/14033/1418 +0 -0
- package/gdb/base/14033/174 +0 -0
- package/gdb/base/14033/175 +0 -0
- package/gdb/base/14033/2187 +0 -0
- package/gdb/base/14033/2224 +0 -0
- package/gdb/base/14033/2228 +0 -0
- package/gdb/base/14033/2328 +0 -0
- package/gdb/base/14033/2336 +0 -0
- package/gdb/base/14033/2337 +0 -0
- package/gdb/base/14033/2579 +0 -0
- package/gdb/base/14033/2600 +0 -0
- package/gdb/base/14033/2600_fsm +0 -0
- package/gdb/base/14033/2600_vm +0 -0
- package/gdb/base/14033/2601 +0 -0
- package/gdb/base/14033/2601_fsm +0 -0
- package/gdb/base/14033/2601_vm +0 -0
- package/gdb/base/14033/2602 +0 -0
- package/gdb/base/14033/2602_fsm +0 -0
- package/gdb/base/14033/2602_vm +0 -0
- package/gdb/base/14033/2603 +0 -0
- package/gdb/base/14033/2603_fsm +0 -0
- package/gdb/base/14033/2603_vm +0 -0
- package/gdb/base/14033/2604 +0 -0
- package/gdb/base/14033/2605 +0 -0
- package/gdb/base/14033/2605_fsm +0 -0
- package/gdb/base/14033/2605_vm +0 -0
- package/gdb/base/14033/2606 +0 -0
- package/gdb/base/14033/2606_fsm +0 -0
- package/gdb/base/14033/2606_vm +0 -0
- package/gdb/base/14033/2607 +0 -0
- package/gdb/base/14033/2607_fsm +0 -0
- package/gdb/base/14033/2607_vm +0 -0
- package/gdb/base/14033/2608 +0 -0
- package/gdb/base/14033/2608_fsm +0 -0
- package/gdb/base/14033/2608_vm +0 -0
- package/gdb/base/14033/2609 +0 -0
- package/gdb/base/14033/2609_fsm +0 -0
- package/gdb/base/14033/2609_vm +0 -0
- package/gdb/base/14033/2610 +0 -0
- package/gdb/base/14033/2610_fsm +0 -0
- package/gdb/base/14033/2610_vm +0 -0
- package/gdb/base/14033/2611 +0 -0
- package/gdb/base/14033/2612 +0 -0
- package/gdb/base/14033/2612_fsm +0 -0
- package/gdb/base/14033/2612_vm +0 -0
- package/gdb/base/14033/2613 +0 -0
- package/gdb/base/14033/2615 +0 -0
- package/gdb/base/14033/2615_fsm +0 -0
- package/gdb/base/14033/2615_vm +0 -0
- package/gdb/base/14033/2616 +0 -0
- package/gdb/base/14033/2616_fsm +0 -0
- package/gdb/base/14033/2616_vm +0 -0
- package/gdb/base/14033/2617 +0 -0
- package/gdb/base/14033/2617_fsm +0 -0
- package/gdb/base/14033/2617_vm +0 -0
- package/gdb/base/14033/2618 +0 -0
- package/gdb/base/14033/2618_fsm +0 -0
- package/gdb/base/14033/2618_vm +0 -0
- package/gdb/base/14033/2619 +0 -0
- package/gdb/base/14033/2619_fsm +0 -0
- package/gdb/base/14033/2619_vm +0 -0
- package/gdb/base/14033/2620 +0 -0
- package/gdb/base/14033/2650 +0 -0
- package/gdb/base/14033/2651 +0 -0
- package/gdb/base/14033/2652 +0 -0
- package/gdb/base/14033/2653 +0 -0
- package/gdb/base/14033/2654 +0 -0
- package/gdb/base/14033/2655 +0 -0
- package/gdb/base/14033/2656 +0 -0
- package/gdb/base/14033/2657 +0 -0
- package/gdb/base/14033/2658 +0 -0
- package/gdb/base/14033/2659 +0 -0
- package/gdb/base/14033/2660 +0 -0
- package/gdb/base/14033/2661 +0 -0
- package/gdb/base/14033/2662 +0 -0
- package/gdb/base/14033/2663 +0 -0
- package/gdb/base/14033/2664 +0 -0
- package/gdb/base/14033/2665 +0 -0
- package/gdb/base/14033/2666 +0 -0
- package/gdb/base/14033/2667 +0 -0
- package/gdb/base/14033/2668 +0 -0
- package/gdb/base/14033/2669 +0 -0
- package/gdb/base/14033/2670 +0 -0
- package/gdb/base/14033/2673 +0 -0
- package/gdb/base/14033/2673_fsm +0 -0
- package/gdb/base/14033/2674 +0 -0
- package/gdb/base/14033/2674_fsm +0 -0
- package/gdb/base/14033/2675 +0 -0
- package/gdb/base/14033/2678 +0 -0
- package/gdb/base/14033/2679 +0 -0
- package/gdb/base/14033/2680 +0 -0
- package/gdb/base/14033/2681 +0 -0
- package/gdb/base/14033/2682 +0 -0
- package/gdb/base/14033/2683 +0 -0
- package/gdb/base/14033/2684 +0 -0
- package/gdb/base/14033/2685 +0 -0
- package/gdb/base/14033/2686 +0 -0
- package/gdb/base/14033/2687 +0 -0
- package/gdb/base/14033/2688 +0 -0
- package/gdb/base/14033/2689 +0 -0
- package/gdb/base/14033/2690 +0 -0
- package/gdb/base/14033/2691 +0 -0
- package/gdb/base/14033/2692 +0 -0
- package/gdb/base/14033/2693 +0 -0
- package/gdb/base/14033/2696 +0 -0
- package/gdb/base/14033/2699 +0 -0
- package/gdb/base/14033/2701 +0 -0
- package/gdb/base/14033/2702 +0 -0
- package/gdb/base/14033/2703 +0 -0
- package/gdb/base/14033/2704 +0 -0
- package/gdb/base/14033/2753 +0 -0
- package/gdb/base/14033/2753_fsm +0 -0
- package/gdb/base/14033/2753_vm +0 -0
- package/gdb/base/14033/2754 +0 -0
- package/gdb/base/14033/2755 +0 -0
- package/gdb/base/14033/2756 +0 -0
- package/gdb/base/14033/2757 +0 -0
- package/gdb/base/14033/2830 +0 -0
- package/gdb/base/14033/2831 +0 -0
- package/gdb/base/14033/2832 +0 -0
- package/gdb/base/14033/2833 +0 -0
- package/gdb/base/14033/2834 +0 -0
- package/gdb/base/14033/2835 +0 -0
- package/gdb/base/14033/2836 +0 -0
- package/gdb/base/14033/2836_fsm +0 -0
- package/gdb/base/14033/2836_vm +0 -0
- package/gdb/base/14033/2837 +0 -0
- package/gdb/base/14033/2838 +0 -0
- package/gdb/base/14033/2838_fsm +0 -0
- package/gdb/base/14033/2838_vm +0 -0
- package/gdb/base/14033/2839 +0 -0
- package/gdb/base/14033/2840 +0 -0
- package/gdb/base/14033/2840_fsm +0 -0
- package/gdb/base/14033/2840_vm +0 -0
- package/gdb/base/14033/2841 +0 -0
- package/gdb/base/14033/2995 +0 -0
- package/gdb/base/14033/2996 +0 -0
- package/gdb/base/14033/3079 +0 -0
- package/gdb/base/14033/3079_fsm +0 -0
- package/gdb/base/14033/3079_vm +0 -0
- package/gdb/base/14033/3080 +0 -0
- package/gdb/base/14033/3081 +0 -0
- package/gdb/base/14033/3085 +0 -0
- package/gdb/base/14033/3118 +0 -0
- package/gdb/base/14033/3119 +0 -0
- package/gdb/base/14033/3164 +0 -0
- package/gdb/base/14033/3256 +0 -0
- package/gdb/base/14033/3257 +0 -0
- package/gdb/base/14033/3258 +0 -0
- package/gdb/base/14033/3350 +0 -0
- package/gdb/base/14033/3351 +0 -0
- package/gdb/base/14033/3379 +0 -0
- package/gdb/base/14033/3380 +0 -0
- package/gdb/base/14033/3381 +0 -0
- package/gdb/base/14033/3394 +0 -0
- package/gdb/base/14033/3394_fsm +0 -0
- package/gdb/base/14033/3394_vm +0 -0
- package/gdb/base/14033/3395 +0 -0
- package/gdb/base/14033/3429 +0 -0
- package/gdb/base/14033/3430 +0 -0
- package/gdb/base/14033/3431 +0 -0
- package/gdb/base/14033/3433 +0 -0
- package/gdb/base/14033/3439 +0 -0
- package/gdb/base/14033/3440 +0 -0
- package/gdb/base/14033/3455 +0 -0
- package/gdb/base/14033/3456 +0 -0
- package/gdb/base/14033/3456_fsm +0 -0
- package/gdb/base/14033/3456_vm +0 -0
- package/gdb/base/14033/3466 +0 -0
- package/gdb/base/14033/3467 +0 -0
- package/gdb/base/14033/3468 +0 -0
- package/gdb/base/14033/3501 +0 -0
- package/gdb/base/14033/3502 +0 -0
- package/gdb/base/14033/3503 +0 -0
- package/gdb/base/14033/3534 +0 -0
- package/gdb/base/14033/3541 +0 -0
- package/gdb/base/14033/3541_fsm +0 -0
- package/gdb/base/14033/3541_vm +0 -0
- package/gdb/base/14033/3542 +0 -0
- package/gdb/base/14033/3574 +0 -0
- package/gdb/base/14033/3575 +0 -0
- package/gdb/base/14033/3576 +0 -0
- package/gdb/base/14033/3596 +0 -0
- package/gdb/base/14033/3597 +0 -0
- package/gdb/base/14033/3598 +0 -0
- package/gdb/base/14033/3599 +0 -0
- package/gdb/base/14033/3600 +0 -0
- package/gdb/base/14033/3600_fsm +0 -0
- package/gdb/base/14033/3600_vm +0 -0
- package/gdb/base/14033/3601 +0 -0
- package/gdb/base/14033/3601_fsm +0 -0
- package/gdb/base/14033/3601_vm +0 -0
- package/gdb/base/14033/3602 +0 -0
- package/gdb/base/14033/3602_fsm +0 -0
- package/gdb/base/14033/3602_vm +0 -0
- package/gdb/base/14033/3603 +0 -0
- package/gdb/base/14033/3603_fsm +0 -0
- package/gdb/base/14033/3603_vm +0 -0
- package/gdb/base/14033/3604 +0 -0
- package/gdb/base/14033/3605 +0 -0
- package/gdb/base/14033/3606 +0 -0
- package/gdb/base/14033/3607 +0 -0
- package/gdb/base/14033/3608 +0 -0
- package/gdb/base/14033/3609 +0 -0
- package/gdb/base/14033/3712 +0 -0
- package/gdb/base/14033/3764 +0 -0
- package/gdb/base/14033/3764_fsm +0 -0
- package/gdb/base/14033/3764_vm +0 -0
- package/gdb/base/14033/3766 +0 -0
- package/gdb/base/14033/3767 +0 -0
- package/gdb/base/14033/3997 +0 -0
- package/gdb/base/14033/4143 +0 -0
- package/gdb/base/14033/4144 +0 -0
- package/gdb/base/14033/4145 +0 -0
- package/gdb/base/14033/4146 +0 -0
- package/gdb/base/14033/4147 +0 -0
- package/gdb/base/14033/4148 +0 -0
- package/gdb/base/14033/4149 +0 -0
- package/gdb/base/14033/4150 +0 -0
- package/gdb/base/14033/4151 +0 -0
- package/gdb/base/14033/4152 +0 -0
- package/gdb/base/14033/4153 +0 -0
- package/gdb/base/14033/4154 +0 -0
- package/gdb/base/14033/4155 +0 -0
- package/gdb/base/14033/4156 +0 -0
- package/gdb/base/14033/4157 +0 -0
- package/gdb/base/14033/4158 +0 -0
- package/gdb/base/14033/4159 +0 -0
- package/gdb/base/14033/4160 +0 -0
- package/gdb/base/14033/4163 +0 -0
- package/gdb/base/14033/4164 +0 -0
- package/gdb/base/14033/4165 +0 -0
- package/gdb/base/14033/4166 +0 -0
- package/gdb/base/14033/4167 +0 -0
- package/gdb/base/14033/4168 +0 -0
- package/gdb/base/14033/4169 +0 -0
- package/gdb/base/14033/4170 +0 -0
- package/gdb/base/14033/4171 +0 -0
- package/gdb/base/14033/4172 +0 -0
- package/gdb/base/14033/4173 +0 -0
- package/gdb/base/14033/4174 +0 -0
- package/gdb/base/14033/5002 +0 -0
- package/gdb/base/14033/548 +0 -0
- package/gdb/base/14033/549 +0 -0
- package/gdb/base/14033/6102 +0 -0
- package/gdb/base/14033/6104 +0 -0
- package/gdb/base/14033/6106 +0 -0
- package/gdb/base/14033/6110 +0 -0
- package/gdb/base/14033/6111 +0 -0
- package/gdb/base/14033/6112 +0 -0
- package/gdb/base/14033/6113 +0 -0
- package/gdb/base/14033/6117 +0 -0
- package/gdb/base/14033/6175 +0 -0
- package/gdb/base/14033/6176 +0 -0
- package/gdb/base/14033/826 +0 -0
- package/gdb/base/14033/827 +0 -0
- package/gdb/base/14033/828 +0 -0
- package/gdb/base/14033/PG_VERSION +0 -1
- package/gdb/base/14033/pg_filenode.map +0 -0
- package/gdb/base/14034/112 +0 -0
- package/gdb/base/14034/113 +0 -0
- package/gdb/base/14034/1247 +0 -0
- package/gdb/base/14034/1247_fsm +0 -0
- package/gdb/base/14034/1247_vm +0 -0
- package/gdb/base/14034/1249 +0 -0
- package/gdb/base/14034/1249_fsm +0 -0
- package/gdb/base/14034/1249_vm +0 -0
- package/gdb/base/14034/1255 +0 -0
- package/gdb/base/14034/1255_fsm +0 -0
- package/gdb/base/14034/1255_vm +0 -0
- package/gdb/base/14034/1259 +0 -0
- package/gdb/base/14034/1259_fsm +0 -0
- package/gdb/base/14034/1259_vm +0 -0
- package/gdb/base/14034/13852 +0 -0
- package/gdb/base/14034/13852_fsm +0 -0
- package/gdb/base/14034/13852_vm +0 -0
- package/gdb/base/14034/13855 +0 -0
- package/gdb/base/14034/13856 +0 -0
- package/gdb/base/14034/13857 +0 -0
- package/gdb/base/14034/13857_fsm +0 -0
- package/gdb/base/14034/13857_vm +0 -0
- package/gdb/base/14034/13860 +0 -0
- package/gdb/base/14034/13861 +0 -0
- package/gdb/base/14034/13862 +0 -0
- package/gdb/base/14034/13862_fsm +0 -0
- package/gdb/base/14034/13862_vm +0 -0
- package/gdb/base/14034/13865 +0 -0
- package/gdb/base/14034/13866 +0 -0
- package/gdb/base/14034/13867 +0 -0
- package/gdb/base/14034/13867_fsm +0 -0
- package/gdb/base/14034/13867_vm +0 -0
- package/gdb/base/14034/13870 +0 -0
- package/gdb/base/14034/13871 +0 -0
- package/gdb/base/14034/1417 +0 -0
- package/gdb/base/14034/1418 +0 -0
- package/gdb/base/14034/16386 +0 -0
- package/gdb/base/14034/16389 +0 -0
- package/gdb/base/14034/16390 +0 -0
- package/gdb/base/14034/16391 +0 -0
- package/gdb/base/14034/16393 +0 -0
- package/gdb/base/14034/16396 +0 -0
- package/gdb/base/14034/16397 +0 -0
- package/gdb/base/14034/16398 +0 -0
- package/gdb/base/14034/16400 +0 -0
- package/gdb/base/14034/16403 +0 -0
- package/gdb/base/14034/16404 +0 -0
- package/gdb/base/14034/16420 +0 -0
- package/gdb/base/14034/16423 +0 -0
- package/gdb/base/14034/16424 +0 -0
- package/gdb/base/14034/16425 +0 -0
- package/gdb/base/14034/16427 +0 -0
- package/gdb/base/14034/16430 +0 -0
- package/gdb/base/14034/16431 +0 -0
- package/gdb/base/14034/16432 +0 -0
- package/gdb/base/14034/16434 +0 -0
- package/gdb/base/14034/16437 +0 -0
- package/gdb/base/14034/16438 +0 -0
- package/gdb/base/14034/16439 +0 -0
- package/gdb/base/14034/16446 +0 -0
- package/gdb/base/14034/16449 +0 -0
- package/gdb/base/14034/16450 +0 -0
- package/gdb/base/14034/16451 +0 -0
- package/gdb/base/14034/16458 +0 -0
- package/gdb/base/14034/16461 +0 -0
- package/gdb/base/14034/16462 +0 -0
- package/gdb/base/14034/16463 +0 -0
- package/gdb/base/14034/16475 +0 -0
- package/gdb/base/14034/16478 +0 -0
- package/gdb/base/14034/16479 +0 -0
- package/gdb/base/14034/16480 +0 -0
- package/gdb/base/14034/174 +0 -0
- package/gdb/base/14034/175 +0 -0
- package/gdb/base/14034/2187 +0 -0
- package/gdb/base/14034/2224 +0 -0
- package/gdb/base/14034/2228 +0 -0
- package/gdb/base/14034/2328 +0 -0
- package/gdb/base/14034/2336 +0 -0
- package/gdb/base/14034/2337 +0 -0
- package/gdb/base/14034/2579 +0 -0
- package/gdb/base/14034/2600 +0 -0
- package/gdb/base/14034/2600_fsm +0 -0
- package/gdb/base/14034/2600_vm +0 -0
- package/gdb/base/14034/2601 +0 -0
- package/gdb/base/14034/2601_fsm +0 -0
- package/gdb/base/14034/2601_vm +0 -0
- package/gdb/base/14034/2602 +0 -0
- package/gdb/base/14034/2602_fsm +0 -0
- package/gdb/base/14034/2602_vm +0 -0
- package/gdb/base/14034/2603 +0 -0
- package/gdb/base/14034/2603_fsm +0 -0
- package/gdb/base/14034/2603_vm +0 -0
- package/gdb/base/14034/2604 +0 -0
- package/gdb/base/14034/2605 +0 -0
- package/gdb/base/14034/2605_fsm +0 -0
- package/gdb/base/14034/2605_vm +0 -0
- package/gdb/base/14034/2606 +0 -0
- package/gdb/base/14034/2606_fsm +0 -0
- package/gdb/base/14034/2606_vm +0 -0
- package/gdb/base/14034/2607 +0 -0
- package/gdb/base/14034/2607_fsm +0 -0
- package/gdb/base/14034/2607_vm +0 -0
- package/gdb/base/14034/2608 +0 -0
- package/gdb/base/14034/2608_fsm +0 -0
- package/gdb/base/14034/2608_vm +0 -0
- package/gdb/base/14034/2609 +0 -0
- package/gdb/base/14034/2609_fsm +0 -0
- package/gdb/base/14034/2609_vm +0 -0
- package/gdb/base/14034/2610 +0 -0
- package/gdb/base/14034/2610_fsm +0 -0
- package/gdb/base/14034/2610_vm +0 -0
- package/gdb/base/14034/2611 +0 -0
- package/gdb/base/14034/2612 +0 -0
- package/gdb/base/14034/2612_fsm +0 -0
- package/gdb/base/14034/2612_vm +0 -0
- package/gdb/base/14034/2613 +0 -0
- package/gdb/base/14034/2615 +0 -0
- package/gdb/base/14034/2615_fsm +0 -0
- package/gdb/base/14034/2615_vm +0 -0
- package/gdb/base/14034/2616 +0 -0
- package/gdb/base/14034/2616_fsm +0 -0
- package/gdb/base/14034/2616_vm +0 -0
- package/gdb/base/14034/2617 +0 -0
- package/gdb/base/14034/2617_fsm +0 -0
- package/gdb/base/14034/2617_vm +0 -0
- package/gdb/base/14034/2618 +0 -0
- package/gdb/base/14034/2618_fsm +0 -0
- package/gdb/base/14034/2618_vm +0 -0
- package/gdb/base/14034/2619 +0 -0
- package/gdb/base/14034/2619_fsm +0 -0
- package/gdb/base/14034/2619_vm +0 -0
- package/gdb/base/14034/2620 +0 -0
- package/gdb/base/14034/2650 +0 -0
- package/gdb/base/14034/2651 +0 -0
- package/gdb/base/14034/2652 +0 -0
- package/gdb/base/14034/2653 +0 -0
- package/gdb/base/14034/2654 +0 -0
- package/gdb/base/14034/2655 +0 -0
- package/gdb/base/14034/2656 +0 -0
- package/gdb/base/14034/2657 +0 -0
- package/gdb/base/14034/2658 +0 -0
- package/gdb/base/14034/2659 +0 -0
- package/gdb/base/14034/2660 +0 -0
- package/gdb/base/14034/2661 +0 -0
- package/gdb/base/14034/2662 +0 -0
- package/gdb/base/14034/2663 +0 -0
- package/gdb/base/14034/2664 +0 -0
- package/gdb/base/14034/2665 +0 -0
- package/gdb/base/14034/2666 +0 -0
- package/gdb/base/14034/2667 +0 -0
- package/gdb/base/14034/2668 +0 -0
- package/gdb/base/14034/2669 +0 -0
- package/gdb/base/14034/2670 +0 -0
- package/gdb/base/14034/2673 +0 -0
- package/gdb/base/14034/2673_fsm +0 -0
- package/gdb/base/14034/2674 +0 -0
- package/gdb/base/14034/2674_fsm +0 -0
- package/gdb/base/14034/2675 +0 -0
- package/gdb/base/14034/2678 +0 -0
- package/gdb/base/14034/2679 +0 -0
- package/gdb/base/14034/2680 +0 -0
- package/gdb/base/14034/2681 +0 -0
- package/gdb/base/14034/2682 +0 -0
- package/gdb/base/14034/2683 +0 -0
- package/gdb/base/14034/2684 +0 -0
- package/gdb/base/14034/2685 +0 -0
- package/gdb/base/14034/2686 +0 -0
- package/gdb/base/14034/2687 +0 -0
- package/gdb/base/14034/2688 +0 -0
- package/gdb/base/14034/2689 +0 -0
- package/gdb/base/14034/2690 +0 -0
- package/gdb/base/14034/2691 +0 -0
- package/gdb/base/14034/2692 +0 -0
- package/gdb/base/14034/2693 +0 -0
- package/gdb/base/14034/2696 +0 -0
- package/gdb/base/14034/2699 +0 -0
- package/gdb/base/14034/2701 +0 -0
- package/gdb/base/14034/2702 +0 -0
- package/gdb/base/14034/2703 +0 -0
- package/gdb/base/14034/2704 +0 -0
- package/gdb/base/14034/2753 +0 -0
- package/gdb/base/14034/2753_fsm +0 -0
- package/gdb/base/14034/2753_vm +0 -0
- package/gdb/base/14034/2754 +0 -0
- package/gdb/base/14034/2755 +0 -0
- package/gdb/base/14034/2756 +0 -0
- package/gdb/base/14034/2757 +0 -0
- package/gdb/base/14034/2830 +0 -0
- package/gdb/base/14034/2831 +0 -0
- package/gdb/base/14034/2832 +0 -0
- package/gdb/base/14034/2833 +0 -0
- package/gdb/base/14034/2834 +0 -0
- package/gdb/base/14034/2835 +0 -0
- package/gdb/base/14034/2836 +0 -0
- package/gdb/base/14034/2836_fsm +0 -0
- package/gdb/base/14034/2836_vm +0 -0
- package/gdb/base/14034/2837 +0 -0
- package/gdb/base/14034/2838 +0 -0
- package/gdb/base/14034/2838_fsm +0 -0
- package/gdb/base/14034/2838_vm +0 -0
- package/gdb/base/14034/2839 +0 -0
- package/gdb/base/14034/2840 +0 -0
- package/gdb/base/14034/2840_fsm +0 -0
- package/gdb/base/14034/2840_vm +0 -0
- package/gdb/base/14034/2841 +0 -0
- package/gdb/base/14034/2995 +0 -0
- package/gdb/base/14034/2996 +0 -0
- package/gdb/base/14034/3079 +0 -0
- package/gdb/base/14034/3079_fsm +0 -0
- package/gdb/base/14034/3079_vm +0 -0
- package/gdb/base/14034/3080 +0 -0
- package/gdb/base/14034/3081 +0 -0
- package/gdb/base/14034/3085 +0 -0
- package/gdb/base/14034/3118 +0 -0
- package/gdb/base/14034/3119 +0 -0
- package/gdb/base/14034/3164 +0 -0
- package/gdb/base/14034/3256 +0 -0
- package/gdb/base/14034/3257 +0 -0
- package/gdb/base/14034/3258 +0 -0
- package/gdb/base/14034/3350 +0 -0
- package/gdb/base/14034/3351 +0 -0
- package/gdb/base/14034/3379 +0 -0
- package/gdb/base/14034/3380 +0 -0
- package/gdb/base/14034/3381 +0 -0
- package/gdb/base/14034/3394 +0 -0
- package/gdb/base/14034/3394_fsm +0 -0
- package/gdb/base/14034/3394_vm +0 -0
- package/gdb/base/14034/3395 +0 -0
- package/gdb/base/14034/3429 +0 -0
- package/gdb/base/14034/3430 +0 -0
- package/gdb/base/14034/3431 +0 -0
- package/gdb/base/14034/3433 +0 -0
- package/gdb/base/14034/3439 +0 -0
- package/gdb/base/14034/3440 +0 -0
- package/gdb/base/14034/3455 +0 -0
- package/gdb/base/14034/3456 +0 -0
- package/gdb/base/14034/3456_fsm +0 -0
- package/gdb/base/14034/3456_vm +0 -0
- package/gdb/base/14034/3466 +0 -0
- package/gdb/base/14034/3467 +0 -0
- package/gdb/base/14034/3468 +0 -0
- package/gdb/base/14034/3501 +0 -0
- package/gdb/base/14034/3502 +0 -0
- package/gdb/base/14034/3503 +0 -0
- package/gdb/base/14034/3534 +0 -0
- package/gdb/base/14034/3541 +0 -0
- package/gdb/base/14034/3541_fsm +0 -0
- package/gdb/base/14034/3541_vm +0 -0
- package/gdb/base/14034/3542 +0 -0
- package/gdb/base/14034/3574 +0 -0
- package/gdb/base/14034/3575 +0 -0
- package/gdb/base/14034/3576 +0 -0
- package/gdb/base/14034/3596 +0 -0
- package/gdb/base/14034/3597 +0 -0
- package/gdb/base/14034/3598 +0 -0
- package/gdb/base/14034/3599 +0 -0
- package/gdb/base/14034/3600 +0 -0
- package/gdb/base/14034/3600_fsm +0 -0
- package/gdb/base/14034/3600_vm +0 -0
- package/gdb/base/14034/3601 +0 -0
- package/gdb/base/14034/3601_fsm +0 -0
- package/gdb/base/14034/3601_vm +0 -0
- package/gdb/base/14034/3602 +0 -0
- package/gdb/base/14034/3602_fsm +0 -0
- package/gdb/base/14034/3602_vm +0 -0
- package/gdb/base/14034/3603 +0 -0
- package/gdb/base/14034/3603_fsm +0 -0
- package/gdb/base/14034/3603_vm +0 -0
- package/gdb/base/14034/3604 +0 -0
- package/gdb/base/14034/3605 +0 -0
- package/gdb/base/14034/3606 +0 -0
- package/gdb/base/14034/3607 +0 -0
- package/gdb/base/14034/3608 +0 -0
- package/gdb/base/14034/3609 +0 -0
- package/gdb/base/14034/3712 +0 -0
- package/gdb/base/14034/3764 +0 -0
- package/gdb/base/14034/3764_fsm +0 -0
- package/gdb/base/14034/3764_vm +0 -0
- package/gdb/base/14034/3766 +0 -0
- package/gdb/base/14034/3767 +0 -0
- package/gdb/base/14034/3997 +0 -0
- package/gdb/base/14034/4143 +0 -0
- package/gdb/base/14034/4144 +0 -0
- package/gdb/base/14034/4145 +0 -0
- package/gdb/base/14034/4146 +0 -0
- package/gdb/base/14034/4147 +0 -0
- package/gdb/base/14034/4148 +0 -0
- package/gdb/base/14034/4149 +0 -0
- package/gdb/base/14034/4150 +0 -0
- package/gdb/base/14034/4151 +0 -0
- package/gdb/base/14034/4152 +0 -0
- package/gdb/base/14034/4153 +0 -0
- package/gdb/base/14034/4154 +0 -0
- package/gdb/base/14034/4155 +0 -0
- package/gdb/base/14034/4156 +0 -0
- package/gdb/base/14034/4157 +0 -0
- package/gdb/base/14034/4158 +0 -0
- package/gdb/base/14034/4159 +0 -0
- package/gdb/base/14034/4160 +0 -0
- package/gdb/base/14034/4163 +0 -0
- package/gdb/base/14034/4164 +0 -0
- package/gdb/base/14034/4165 +0 -0
- package/gdb/base/14034/4166 +0 -0
- package/gdb/base/14034/4167 +0 -0
- package/gdb/base/14034/4168 +0 -0
- package/gdb/base/14034/4169 +0 -0
- package/gdb/base/14034/4170 +0 -0
- package/gdb/base/14034/4171 +0 -0
- package/gdb/base/14034/4172 +0 -0
- package/gdb/base/14034/4173 +0 -0
- package/gdb/base/14034/4174 +0 -0
- package/gdb/base/14034/5002 +0 -0
- package/gdb/base/14034/548 +0 -0
- package/gdb/base/14034/549 +0 -0
- package/gdb/base/14034/6102 +0 -0
- package/gdb/base/14034/6104 +0 -0
- package/gdb/base/14034/6106 +0 -0
- package/gdb/base/14034/6110 +0 -0
- package/gdb/base/14034/6111 +0 -0
- package/gdb/base/14034/6112 +0 -0
- package/gdb/base/14034/6113 +0 -0
- package/gdb/base/14034/6117 +0 -0
- package/gdb/base/14034/6175 +0 -0
- package/gdb/base/14034/6176 +0 -0
- package/gdb/base/14034/826 +0 -0
- package/gdb/base/14034/827 +0 -0
- package/gdb/base/14034/828 +0 -0
- package/gdb/base/14034/PG_VERSION +0 -1
- package/gdb/base/14034/pg_filenode.map +0 -0
- package/gdb/base/14034/pg_internal.init +0 -0
- package/gdb/global/1213 +0 -0
- package/gdb/global/1213_fsm +0 -0
- package/gdb/global/1213_vm +0 -0
- package/gdb/global/1214 +0 -0
- package/gdb/global/1214_fsm +0 -0
- package/gdb/global/1214_vm +0 -0
- package/gdb/global/1232 +0 -0
- package/gdb/global/1233 +0 -0
- package/gdb/global/1260 +0 -0
- package/gdb/global/1260_fsm +0 -0
- package/gdb/global/1260_vm +0 -0
- package/gdb/global/1261 +0 -0
- package/gdb/global/1261_fsm +0 -0
- package/gdb/global/1261_vm +0 -0
- package/gdb/global/1262 +0 -0
- package/gdb/global/1262_fsm +0 -0
- package/gdb/global/1262_vm +0 -0
- package/gdb/global/2396 +0 -0
- package/gdb/global/2396_fsm +0 -0
- package/gdb/global/2396_vm +0 -0
- package/gdb/global/2397 +0 -0
- package/gdb/global/2671 +0 -0
- package/gdb/global/2672 +0 -0
- package/gdb/global/2676 +0 -0
- package/gdb/global/2677 +0 -0
- package/gdb/global/2694 +0 -0
- package/gdb/global/2695 +0 -0
- package/gdb/global/2697 +0 -0
- package/gdb/global/2698 +0 -0
- package/gdb/global/2846 +0 -0
- package/gdb/global/2847 +0 -0
- package/gdb/global/2964 +0 -0
- package/gdb/global/2965 +0 -0
- package/gdb/global/2966 +0 -0
- package/gdb/global/2967 +0 -0
- package/gdb/global/3592 +0 -0
- package/gdb/global/3593 +0 -0
- package/gdb/global/4060 +0 -0
- package/gdb/global/4061 +0 -0
- package/gdb/global/4175 +0 -0
- package/gdb/global/4176 +0 -0
- package/gdb/global/4177 +0 -0
- package/gdb/global/4178 +0 -0
- package/gdb/global/4181 +0 -0
- package/gdb/global/4182 +0 -0
- package/gdb/global/4183 +0 -0
- package/gdb/global/4184 +0 -0
- package/gdb/global/4185 +0 -0
- package/gdb/global/4186 +0 -0
- package/gdb/global/6000 +0 -0
- package/gdb/global/6001 +0 -0
- package/gdb/global/6002 +0 -0
- package/gdb/global/6100 +0 -0
- package/gdb/global/6114 +0 -0
- package/gdb/global/6115 +0 -0
- package/gdb/global/pg_control +0 -0
- package/gdb/global/pg_filenode.map +0 -0
- package/gdb/global/pg_internal.init +0 -0
- package/gdb/pg_hba.conf +0 -98
- package/gdb/pg_ident.conf +0 -42
- package/gdb/pg_logical/replorigin_checkpoint +0 -0
- package/gdb/pg_multixact/members/0000 +0 -0
- package/gdb/pg_multixact/offsets/0000 +0 -0
- package/gdb/pg_stat/db_0.stat +0 -0
- package/gdb/pg_stat/db_14034.stat +0 -0
- package/gdb/pg_stat/global.stat +0 -0
- package/gdb/pg_subtrans/0000 +0 -0
- package/gdb/pg_wal/000000010000000000000001 +0 -0
- package/gdb/pg_xact/0000 +0 -0
- package/gdb/postgresql.auto.conf +0 -2
- package/gdb/postgresql.conf +0 -796
- package/gdb/postmaster.opts +0 -1
- package/server/API Project-7d45e9f24a96.p12 +0 -0
- package/server/grnmap.pem +0 -31
- package/server/grnsight.pem +0 -19
- package/test-files/import-samples/attributes.graphml +0 -40
- package/test-files/import-samples/port.graphml +0 -32
- package/test-files/import-samples/simple.graphml +0 -31
- package/web-client/public/js/grnsight.min.js +0 -2371
|
@@ -12,6 +12,7 @@ import {
|
|
|
12
12
|
} from "./update-app";
|
|
13
13
|
|
|
14
14
|
import { queryExpressionDatabase } from "./api/grnsight-api.js";
|
|
15
|
+
import { NETWORK_PPI_MODE, NETWORK_GRN_MODE } from "./constants.js";
|
|
15
16
|
|
|
16
17
|
|
|
17
18
|
const EXPRESSION_SHEET_SUFFIXES = ["_expression", "_optimized_expression", "_sigmas"];
|
|
@@ -36,11 +37,11 @@ export const uploadState = {
|
|
|
36
37
|
|
|
37
38
|
export const upload = function () {
|
|
38
39
|
|
|
39
|
-
|
|
40
|
-
var TOOLTIP_SHOW_DELAY
|
|
41
|
-
var TOOLTIP_HIDE_DELAY
|
|
40
|
+
// Values
|
|
41
|
+
var TOOLTIP_SHOW_DELAY = 700;
|
|
42
|
+
var TOOLTIP_HIDE_DELAY = 100;
|
|
42
43
|
|
|
43
|
-
|
|
44
|
+
// Settings Stuff
|
|
44
45
|
var styleLabelTooltips = function () {
|
|
45
46
|
$(".info").tooltip({
|
|
46
47
|
placement: "top",
|
|
@@ -50,13 +51,13 @@ export const upload = function () {
|
|
|
50
51
|
|
|
51
52
|
styleLabelTooltips();
|
|
52
53
|
|
|
53
|
-
$("#printGraph").click(
|
|
54
|
+
$("#printGraph").click(function () {
|
|
54
55
|
if (!$(".startDisabled").hasClass("disabled")) {
|
|
55
56
|
window.print();
|
|
56
57
|
}
|
|
57
58
|
});
|
|
58
59
|
|
|
59
|
-
|
|
60
|
+
// Style of the tooltips when the user mouses over the label names
|
|
60
61
|
$(".info").tooltip({
|
|
61
62
|
placement: "top",
|
|
62
63
|
delay: { show: 700, hide: 100 }
|
|
@@ -69,7 +70,7 @@ export const upload = function () {
|
|
|
69
70
|
});
|
|
70
71
|
|
|
71
72
|
var flattenWorkbook = function (workbook, sheetType) {
|
|
72
|
-
var result = $.extend(true, {
|
|
73
|
+
var result = $.extend(true, {}, workbook, { sheetType: sheetType });
|
|
73
74
|
result.links.forEach(function (link) {
|
|
74
75
|
link.source = link.source.index;
|
|
75
76
|
link.target = link.target.index;
|
|
@@ -116,9 +117,9 @@ export const upload = function () {
|
|
|
116
117
|
$("#exportExcelModal").modal("hide");
|
|
117
118
|
};
|
|
118
119
|
|
|
119
|
-
const updateOptimizationParameters =
|
|
120
|
+
const updateOptimizationParameters = (finalExportSheets) => {
|
|
120
121
|
let optimizationParameters = {
|
|
121
|
-
data: {
|
|
122
|
+
data: grnState.mode === NETWORK_GRN_MODE ? {
|
|
122
123
|
alpha: 0.002,
|
|
123
124
|
"kk_max": 1,
|
|
124
125
|
MaxIter: 100000000,
|
|
@@ -131,29 +132,69 @@ export const upload = function () {
|
|
|
131
132
|
"make_graphs": 1,
|
|
132
133
|
"fix_P": 0,
|
|
133
134
|
"fix_b": 0,
|
|
135
|
+
species: "Saccharomyces cerevisiae",
|
|
136
|
+
"taxon_id":559292,
|
|
137
|
+
workbookType: NETWORK_GRN_MODE
|
|
138
|
+
} : {
|
|
139
|
+
species: "Saccharomyces cerevisiae",
|
|
140
|
+
"taxon_id":559292,
|
|
141
|
+
workbookType: NETWORK_PPI_MODE
|
|
134
142
|
}
|
|
135
143
|
};
|
|
136
|
-
|
|
137
|
-
|
|
138
|
-
|
|
139
|
-
|
|
140
|
-
|
|
141
|
-
|
|
142
|
-
|
|
143
|
-
|
|
144
|
-
|
|
145
|
-
|
|
146
|
-
|
|
147
|
-
|
|
148
|
-
|
|
149
|
-
|
|
150
|
-
|
|
144
|
+
if (grnState.mode === NETWORK_GRN_MODE) {
|
|
145
|
+
const expression = Object.keys(finalExportSheets.expression);
|
|
146
|
+
let expTimepoints = expression.length > 0 ? finalExportSheets.expression[expression[0]].timePoints : null;
|
|
147
|
+
expTimepoints = expTimepoints ? [...(new Set(expTimepoints))].sort(function (a, b) {
|
|
148
|
+
return a - b;
|
|
149
|
+
}) : null;
|
|
150
|
+
const simTimepoints = expTimepoints ? Array.from(Array(expTimepoints[expTimepoints.length - 1] + 1).keys()).filter(x => x % 5 === 0) : null;
|
|
151
|
+
const strain = expression.length > 0 ? expression.map(x => removeExpressionSuffix(x)) : null;
|
|
152
|
+
if (expTimepoints) {
|
|
153
|
+
optimizationParameters.data["expression_timepoints"] = expTimepoints;
|
|
154
|
+
}
|
|
155
|
+
if (strain) {
|
|
156
|
+
optimizationParameters.data.Strain = strain;
|
|
157
|
+
}
|
|
158
|
+
if (simTimepoints) {
|
|
159
|
+
optimizationParameters.data["simulation_timepoints"] = simTimepoints;
|
|
160
|
+
}
|
|
151
161
|
}
|
|
152
|
-
optimizationParameters.data.species = "Saccharomyces cerevisiae";
|
|
153
|
-
optimizationParameters.data["taxon_id"] = 559292;
|
|
154
162
|
return optimizationParameters;
|
|
155
163
|
};
|
|
156
164
|
|
|
165
|
+
// helper method for handleExpressionDataAndExport to reduce indentation
|
|
166
|
+
const expressionDataHandler = (expressionData, sheet, route, extension, sheetType, finalExportSheets) => {
|
|
167
|
+
finalExportSheets.expression[sheet] = expressionData;
|
|
168
|
+
if (finalExportSheets.expression[sheet]) {
|
|
169
|
+
stopLoadingIcon();
|
|
170
|
+
if (!Object.values(finalExportSheets.expression).includes(null)) {
|
|
171
|
+
// we have all of the expression sheets so lets initilize the export process
|
|
172
|
+
Object.keys(finalExportSheets.expression).forEach((sheet) => {
|
|
173
|
+
// make sure that the sheets we queried are populated with the correct data
|
|
174
|
+
if (!(finalExportSheets.expression[sheet].data && finalExportSheets.expression[sheet].timePoints)) {
|
|
175
|
+
// if the resulting query doesn't contains both the timePoint data and
|
|
176
|
+
// the gene data then don't export it. If not don't :)
|
|
177
|
+
finalExportSheets.expression[sheet] = null;
|
|
178
|
+
}
|
|
179
|
+
});
|
|
180
|
+
if (finalExportSheets["optimization_parameters"] === null) {
|
|
181
|
+
finalExportSheets[
|
|
182
|
+
"optimization_parameters"
|
|
183
|
+
] = updateOptimizationParameters(finalExportSheets);
|
|
184
|
+
}
|
|
185
|
+
grnState.workbook.exportSheets = finalExportSheets;
|
|
186
|
+
exportExcel(route, extension, sheetType);
|
|
187
|
+
}
|
|
188
|
+
}
|
|
189
|
+
};
|
|
190
|
+
|
|
191
|
+
// helper method for handleExpressionDataAndExport and handleExportExcelButtonExport to avoid redundant code
|
|
192
|
+
const expressionExportErrorHandler = (error) => {
|
|
193
|
+
console.log(error.stack);
|
|
194
|
+
console.log(error.name);
|
|
195
|
+
console.log(error.message);
|
|
196
|
+
};
|
|
197
|
+
|
|
157
198
|
const handleExpressionDataAndExport = (route, extension, sheetType, source, finalExportSheets) => {
|
|
158
199
|
if (source === "userInput" && grnState.workbook.expression) {
|
|
159
200
|
// make sure that the optimization parameters sheet is actually properly formatted
|
|
@@ -172,48 +213,19 @@ export const upload = function () {
|
|
|
172
213
|
dataset
|
|
173
214
|
}).then(function (timepointsResponse) {
|
|
174
215
|
queryExpressionDatabase({
|
|
175
|
-
type:"ExpressionData",
|
|
216
|
+
type: "ExpressionData",
|
|
176
217
|
dataset,
|
|
177
|
-
genes
|
|
218
|
+
genes: grnState.workbook.genes.map(x => {
|
|
178
219
|
return x.name;
|
|
179
220
|
}).join(","),
|
|
180
221
|
timepoints: timepointsResponse[dataset]
|
|
181
|
-
}).then(
|
|
182
|
-
|
|
183
|
-
|
|
184
|
-
stopLoadingIcon();
|
|
185
|
-
if ( !Object.values(finalExportSheets.expression).includes(null) ) {
|
|
186
|
-
// we have all of the expression sheets so lets initilize the export process
|
|
187
|
-
Object.keys(finalExportSheets.expression).forEach((sheet) => {
|
|
188
|
-
// make sure that the sheets we queried are populated with the correct data
|
|
189
|
-
if (!(finalExportSheets.expression[sheet].data && finalExportSheets.expression[sheet].timePoints)) {
|
|
190
|
-
// if the resulting query doesn't contains both the timePoint data and
|
|
191
|
-
// the gene data then don't export it. If not don't :)
|
|
192
|
-
finalExportSheets.expression[sheet] = null;
|
|
193
|
-
}
|
|
194
|
-
});
|
|
195
|
-
if (finalExportSheets["optimization_parameters"] === null) {
|
|
196
|
-
finalExportSheets["optimization_parameters"] = updateOptimizationParameters(finalExportSheets);
|
|
197
|
-
}
|
|
198
|
-
grnState.workbook.exportSheets = finalExportSheets;
|
|
199
|
-
exportExcel(route, extension, sheetType);
|
|
200
|
-
}
|
|
201
|
-
}
|
|
202
|
-
}).catch(function (error) {
|
|
203
|
-
console.log(error.stack);
|
|
204
|
-
console.log(error.name);
|
|
205
|
-
console.log(error.message);
|
|
206
|
-
});
|
|
207
|
-
}).catch(function (error) {
|
|
208
|
-
console.log(error.stack);
|
|
209
|
-
console.log(error.name);
|
|
210
|
-
console.log(error.message);
|
|
211
|
-
});
|
|
222
|
+
}).then((expressionData) => expressionDataHandler(expressionData, sheet, route, extension, sheetType, finalExportSheets))
|
|
223
|
+
.catch((error) => expressionExportErrorHandler(error));
|
|
224
|
+
}).catch((error) => expressionExportErrorHandler(error));
|
|
212
225
|
}
|
|
213
226
|
}
|
|
214
227
|
};
|
|
215
228
|
|
|
216
|
-
|
|
217
229
|
const handleExportExcelButtonExport = (route, extension, sheetType, source) => {
|
|
218
230
|
grnState.workbook.exportNetworkType = sheetType;
|
|
219
231
|
const workbookSheets = $("input[name=workbookSheets]:checked");
|
|
@@ -278,8 +290,8 @@ export const upload = function () {
|
|
|
278
290
|
}
|
|
279
291
|
}
|
|
280
292
|
}
|
|
281
|
-
const twoColumnSheetType = {"production_rates"
|
|
282
|
-
const twoColumnQuerySheets = Object.keys(finalExportSheets.two_column_sheets).filter(
|
|
293
|
+
const twoColumnSheetType = { "production_rates": "ProductionRates", "degradation_rates": "DegradationRates" };
|
|
294
|
+
const twoColumnQuerySheets = Object.keys(finalExportSheets.two_column_sheets).filter(x => finalExportSheets.two_column_sheets[x] === null);
|
|
283
295
|
if (twoColumnQuerySheets.length > 0) {
|
|
284
296
|
// if we need to query production rates and degradation rates
|
|
285
297
|
for (let sheet of twoColumnQuerySheets) {
|
|
@@ -295,24 +307,28 @@ export const upload = function () {
|
|
|
295
307
|
}
|
|
296
308
|
|
|
297
309
|
queryExpressionDatabase({
|
|
298
|
-
type:twoColumnSheetType[sheet],
|
|
299
|
-
genes:grnState.workbook.genes
|
|
310
|
+
type: twoColumnSheetType[sheet],
|
|
311
|
+
genes: grnState.workbook.genes
|
|
312
|
+
.map((x) => {
|
|
300
313
|
return x.name;
|
|
301
|
-
})
|
|
302
|
-
|
|
314
|
+
})
|
|
315
|
+
.join(","),
|
|
316
|
+
})
|
|
317
|
+
.then(function (response) {
|
|
303
318
|
result.data = response;
|
|
304
319
|
finalExportSheets.two_column_sheets[sheet] = result;
|
|
305
|
-
if (!Object.values(finalExportSheets.two_column_sheets).includes(null)) {
|
|
320
|
+
if (!Object.values( finalExportSheets.two_column_sheets).includes(null)) {
|
|
306
321
|
// if we got all of the two column sheets, then proceed with export
|
|
307
|
-
handleExpressionDataAndExport(
|
|
322
|
+
handleExpressionDataAndExport(
|
|
323
|
+
route,
|
|
324
|
+
extension,
|
|
325
|
+
sheetType,
|
|
326
|
+
source,
|
|
327
|
+
finalExportSheets
|
|
328
|
+
);
|
|
308
329
|
}
|
|
309
|
-
|
|
310
|
-
|
|
311
|
-
console.log(error.stack);
|
|
312
|
-
console.log(error.name);
|
|
313
|
-
console.log(error.message);
|
|
314
|
-
});
|
|
315
|
-
|
|
330
|
+
})
|
|
331
|
+
.catch(error => expressionExportErrorHandler(error));
|
|
316
332
|
}
|
|
317
333
|
}
|
|
318
334
|
} else {
|
|
@@ -321,11 +337,23 @@ export const upload = function () {
|
|
|
321
337
|
}
|
|
322
338
|
};
|
|
323
339
|
|
|
340
|
+
const determineWorkbookType = function () {
|
|
341
|
+
const workbookSheets = $("input[name=workbookSheets]:checked");
|
|
342
|
+
for (const [key, value] of Object.entries(workbookSheets)) {
|
|
343
|
+
if (!isNaN(parseInt(key, 10))) {
|
|
344
|
+
if (value.value === "network_weights" || value.value === "network_optimized_weights") {
|
|
345
|
+
return "weighted";
|
|
346
|
+
}
|
|
347
|
+
}
|
|
348
|
+
}
|
|
349
|
+
return "unweighted";
|
|
350
|
+
};
|
|
351
|
+
|
|
324
352
|
var performExport = function (route, extension, sheetType, source) {
|
|
325
353
|
return function () {
|
|
326
354
|
// Deleted event parameter
|
|
327
355
|
if (route === "export-to-excel" && source) {
|
|
328
|
-
handleExportExcelButtonExport(route, extension,
|
|
356
|
+
handleExportExcelButtonExport(route, extension, determineWorkbookType(), source);
|
|
329
357
|
} else {
|
|
330
358
|
if (!$(this).parent().hasClass("disabled")) {
|
|
331
359
|
var workbookToExport = flattenWorkbook(uploadState.currentWorkbook, sheetType);
|
|
@@ -354,14 +382,10 @@ export const upload = function () {
|
|
|
354
382
|
};
|
|
355
383
|
};
|
|
356
384
|
|
|
357
|
-
const
|
|
358
|
-
const sources = [...new Set(grnState.database.expressionDatasets.map(s => s.slice(0, s.lastIndexOf("_")))
|
|
385
|
+
const createHTMLforGRNForm = () => {
|
|
386
|
+
const sources = [...new Set(grnState.database.expressionDatasets.map(s => s.slice(0, s.lastIndexOf("_"))))];
|
|
359
387
|
let result = `
|
|
360
|
-
<form id=\'
|
|
361
|
-
<div class=\'form-group export-form-group\'>
|
|
362
|
-
<p id=\'exportExcelNetwork\'></p>
|
|
363
|
-
<ul class=\'export-radio-group\' id=\'export-excel-weights-list\' style=\"list-style-type:none;\"> </ul>
|
|
364
|
-
</div>
|
|
388
|
+
<form id=\'exportExcelForm\'>
|
|
365
389
|
<div class=\'form-group export-form-group\'>
|
|
366
390
|
<p id=\'exportExcelExpressionSources\'> </p>
|
|
367
391
|
<ul class=\'export-radio-group\' id=\'export-excel-expression-source-list\' style=\"list-style-type:none;\">
|
|
@@ -377,41 +401,22 @@ export const upload = function () {
|
|
|
377
401
|
</li>`;
|
|
378
402
|
}
|
|
379
403
|
|
|
380
|
-
result +=
|
|
381
|
-
|
|
382
|
-
};
|
|
383
|
-
|
|
384
|
-
const createHTMLforForm2 = () => {
|
|
385
|
-
return `
|
|
386
|
-
<form id=\'exportExcelForm2\'>
|
|
404
|
+
result += `</ul>
|
|
405
|
+
</div>
|
|
387
406
|
<div class=\'form-group export-form-group\'>
|
|
388
407
|
<p id=\'exportExcelWorkbookSheets\'></p>
|
|
389
408
|
<ul class=\'exportExcelWorkbookSheets\' id=\'export-excel-workbook-sheet-list\' style=\"list-style-type:none;\"> </ul>
|
|
390
409
|
</div>
|
|
391
|
-
</form
|
|
392
|
-
|
|
393
|
-
|
|
394
|
-
|
|
395
|
-
// $(".export-excel-weighted-option").remove();
|
|
396
|
-
return `
|
|
397
|
-
<li class=\'export-excel-weighted-option\'>
|
|
398
|
-
<input type=\'radio\' ${grnState.workbook.sheetType === "weighted" ? "checked" : "disabled"}=\"true\" name=\'network-weights\' value=\"weighted\" id=\'exportExcelWeightedRadio\' class=\'export-radio\' />
|
|
399
|
-
<label for=\'exportExcelWeightedRadio\' id=\'exportExcelWeighted\' class=\'export-radio-label ${grnState.workbook.sheetType !== "weighted" && "disabled"}\' >
|
|
400
|
-
Weighted
|
|
401
|
-
</label>
|
|
402
|
-
</li>
|
|
403
|
-
<li class=\'export-excel-weighted-option\'>
|
|
404
|
-
<input type=\'radio\' ${grnState.workbook.sheetType !== "weighted" && "checked=\"true\""} name=\'network-weights\' value=\"unweighted\" id=\'exportExcelUnweightedRadio\' class=\'export-radio\' />
|
|
405
|
-
<label for=\'exportExcelUnweightedRadio\' id=\'exportExcelUnweighted\' class=\'export-radio-label\' >
|
|
406
|
-
Unweighted
|
|
407
|
-
</label>
|
|
408
|
-
</li>`;
|
|
410
|
+
</form>`;
|
|
411
|
+
|
|
412
|
+
return result;
|
|
413
|
+
|
|
409
414
|
};
|
|
410
415
|
|
|
411
416
|
const createHTMLforSheets = (source) => {
|
|
412
417
|
$(".export-excel-workbook-sheet-option").remove();
|
|
413
418
|
// check if user updated data is selected
|
|
414
|
-
let result =
|
|
419
|
+
let result = `
|
|
415
420
|
<li class=\'export-excel-workbook-sheet-option export-excel-workbook-sheet-option-subheader\'>
|
|
416
421
|
<input type=\'checkbox\' name=\'workbookSheets\' checked=\"true\" value=\"select all\" id=\'exportExcelWorkbookSheet-All\' class=\'export-checkbox\' />
|
|
417
422
|
<label for=\'exportExcelWorkbookSheet-All\' id=\'exportExcelWorkbookSheet-All-label\' class=\'export-checkbox-label\' >
|
|
@@ -423,23 +428,25 @@ export const upload = function () {
|
|
|
423
428
|
`;
|
|
424
429
|
const optionalAdditionalSheets = ["optimization_parameters", "production_rates", "degradation_rates", "threshold_b"];
|
|
425
430
|
let networks = [
|
|
426
|
-
|
|
427
|
-
|
|
428
|
-
|
|
429
|
-
networks = networks.filter(x => x !== false);
|
|
431
|
+
[grnState.workbook.network !== undefined, "network"],
|
|
432
|
+
[grnState.workbook.networkOptimizedWeights !== undefined, "network_optimized_weights"],
|
|
433
|
+
[grnState.workbook.networkWeights !== undefined, "network_weights"]];
|
|
434
|
+
// networks = networks.filter(x => x !== false);
|
|
430
435
|
let additionalsheets = grnState.workbook.twoColumnSheets ? [
|
|
431
436
|
...Object.keys(grnState.workbook.twoColumnSheets),
|
|
432
437
|
(grnState.workbook.meta2 !== undefined && "optimization_diagnostics")
|
|
433
438
|
] : [
|
|
434
439
|
(grnState.workbook.meta2 !== undefined && "optimization_diagnostics")
|
|
435
440
|
];
|
|
436
|
-
additionalsheets = additionalsheets.filter(
|
|
441
|
+
additionalsheets = additionalsheets.filter(sheet => (sheet && -1 !== optionalAdditionalSheets.indexOf(sheet)));
|
|
437
442
|
additionalsheets = [...optionalAdditionalSheets, ...additionalsheets].sort();
|
|
438
443
|
additionalsheets = [...(new Set(additionalsheets))];
|
|
439
|
-
for (let
|
|
444
|
+
for (let n of networks) {
|
|
445
|
+
const state = n[0];
|
|
446
|
+
const network = n[1];
|
|
440
447
|
result = result + `
|
|
441
448
|
<li class=\'export-excel-workbook-sheet-option\'>
|
|
442
|
-
<input type=\'checkbox\' name=\'workbookSheets\' checked=\"
|
|
449
|
+
<input type=\'checkbox\' name=\'workbookSheets\' checked=\"${state}\" value=\"${network}\" id=\'exportExcelWorkbookSheet-${network}\' class=\'export-checkbox\' ${!state && "disabled"}/>
|
|
443
450
|
<label for=\'exportExcelWorkbookSheet-${network}\' id=\'exportExcelWorkbookSheet-${network}-label\' class=\'export-checkbox-label\' >
|
|
444
451
|
${network}
|
|
445
452
|
</label>
|
|
@@ -504,51 +511,61 @@ export const upload = function () {
|
|
|
504
511
|
return result;
|
|
505
512
|
};
|
|
506
513
|
|
|
507
|
-
const createHTMLforModalButtons = (
|
|
514
|
+
const createHTMLforModalButtons = () => {
|
|
508
515
|
return `
|
|
509
516
|
<div id=\'exportExcelFooter\' class=\'modal-footer-div\'>
|
|
510
|
-
${ !isInitialModal ?
|
|
511
|
-
`<div>
|
|
512
|
-
<input type=\'button\' class=\'btn btn-default\' id=\'Export-Excel-Button-Back\' value=\'Back\' />
|
|
513
|
-
</div>` : ""
|
|
514
|
-
}
|
|
515
517
|
<div>
|
|
516
|
-
<input type=\'button\' class=\'btn btn-default\' id=\'Export-Excel-Button
|
|
518
|
+
<input type=\'button\' class=\'btn btn-default\' id=\'Export-Excel-Button\' />
|
|
517
519
|
<input type=\'button\' class=\'btn btn-default\' data-dismiss=\'modal\' value=\'Cancel\' />
|
|
518
520
|
<div>
|
|
519
521
|
</div>
|
|
520
522
|
`;
|
|
521
523
|
};
|
|
522
524
|
|
|
523
|
-
|
|
524
|
-
$("
|
|
525
|
-
|
|
526
|
-
|
|
527
|
-
|
|
528
|
-
|
|
529
|
-
|
|
530
|
-
|
|
531
|
-
|
|
532
|
-
|
|
533
|
-
|
|
534
|
-
|
|
525
|
+
const createHTMLforProteinProteinPhysicalInteractionForm = () => {
|
|
526
|
+
$(".export-excel-workbook-sheet-option").remove();
|
|
527
|
+
// check if user updated data is selected
|
|
528
|
+
let result = `
|
|
529
|
+
<form id=\'exportExcelForm\'>
|
|
530
|
+
<div class=\'form-group export-form-group\'>
|
|
531
|
+
<p id=\'exportExcelWorkbookSheets\'></p>
|
|
532
|
+
<ul class=\'exportExcelWorkbookSheets\' id=\'export-excel-workbook-sheet-list\' style=\"list-style-type:none;\">
|
|
533
|
+
<p class=\'export-excel-workbook-sheet-option-subheader\'> Network Sheets </p>
|
|
534
|
+
<li class=\'export-excel-workbook-sheet-option\'>
|
|
535
|
+
<input type=\'checkbox\' name=\'workbookSheets\' checked=\"true\" value=\"network\" id=\'exportExcelWorkbookSheet-network\' class=\'export-checkbox\'/>
|
|
536
|
+
<label for=\'exportExcelWorkbookSheet-network\' id=\'exportExcelWorkbookSheet-network-label\' class=\'export-checkbox-label\' >
|
|
537
|
+
network
|
|
538
|
+
</label>
|
|
539
|
+
</li>
|
|
540
|
+
<p class=\'export-excel-workbook-sheet-option-subheader\'> Additional Sheets </p>
|
|
541
|
+
<li class=\'export-excel-workbook-sheet-option\'>
|
|
542
|
+
<input type=\'checkbox\' name=\'workbookSheets\' checked=\"true\" value=\"optimization_parameters\" id=\'exportExcelWorkbookSheet-optimization_parameters\' class=\'export-checkbox\' />
|
|
543
|
+
<label for=\'exportExcelWorkbookSheet-optimization_parameters\' id=\'exportExcelWorkbookSheet-optimization_parameters-label\' class=\'export-checkbox-label\' >
|
|
544
|
+
optimization_parameters
|
|
545
|
+
</label>
|
|
546
|
+
</li>
|
|
547
|
+
</ul>
|
|
548
|
+
</div>
|
|
549
|
+
</form>`;
|
|
550
|
+
return result;
|
|
535
551
|
};
|
|
536
552
|
|
|
553
|
+
|
|
537
554
|
var handleWorkbookSheetCheckboxBehaviour = () => {
|
|
538
|
-
$("input[name=workbookSheets]").not($("#exportExcelWorkbookSheet-All")).on("click", ()=>{
|
|
555
|
+
$("input[name=workbookSheets]").not($("#exportExcelWorkbookSheet-All")).on("click", () => {
|
|
539
556
|
const selectAll = $("#exportExcelWorkbookSheet-All");
|
|
540
557
|
const allSheets = $("input[name=workbookSheets]");
|
|
541
558
|
if (selectAll[0].checked) {
|
|
542
559
|
for (let i in allSheets) {
|
|
543
560
|
if (typeof allSheets[i] === "object") {
|
|
544
|
-
if (allSheets[i].checked !==
|
|
561
|
+
if (allSheets[i].checked !== selectAll[0].checked) {
|
|
545
562
|
selectAll[0].checked = false;
|
|
546
563
|
}
|
|
547
564
|
}
|
|
548
565
|
}
|
|
549
566
|
}
|
|
550
567
|
});
|
|
551
|
-
$("#exportExcelWorkbookSheet-All").on("click", ()=>{
|
|
568
|
+
$("#exportExcelWorkbookSheet-All").on("click", () => {
|
|
552
569
|
const allSheets = $("input[name=workbookSheets]");
|
|
553
570
|
const selectAll = $("#exportExcelWorkbookSheet-All");
|
|
554
571
|
for (let i in allSheets) {
|
|
@@ -559,31 +576,50 @@ export const upload = function () {
|
|
|
559
576
|
});
|
|
560
577
|
};
|
|
561
578
|
|
|
562
|
-
|
|
563
|
-
const weight = $("input[name=network-weights]:checked")[0].value;
|
|
564
|
-
const source = $("input[name=expressionSource]:checked")[0].value;
|
|
565
|
-
$("#exportExcelForm1").remove();
|
|
566
|
-
$("#exportExcelFooter").remove();
|
|
567
|
-
$("#exportExcelFooter-container").append(createHTMLforModalButtons(false));
|
|
568
|
-
$("#Export-Excel-Button").prop("value", "Export Workbook");
|
|
569
|
-
$("#exportExcelQuestions-containter").append(createHTMLforForm2);
|
|
570
|
-
$("#exportExcelWorkbookSheets").html("Select Workbook Sheets to Export:");
|
|
579
|
+
const handleExpressionSheetsFromSource = function (source) {
|
|
571
580
|
$("#export-excel-workbook-sheet-list").append(createHTMLforSheets(source));
|
|
572
581
|
handleWorkbookSheetCheckboxBehaviour();
|
|
573
|
-
$("#Export-Excel-Button
|
|
574
|
-
handleExportExcelModal();
|
|
575
|
-
$("input[name=network-weights]").removeAttr("checked");
|
|
576
|
-
$("input[name=network-weights][value=" + weight + "]").prop("checked", true);
|
|
577
|
-
$("input[name=expressionSource]").removeAttr("checked");
|
|
578
|
-
$("input[name=expressionSource][value=" + source + "]").prop("checked", true);
|
|
579
|
-
$("#Export-Excel-Button-Continue").on("click", () => handleExportExcelButtonContinue());
|
|
580
|
-
});
|
|
581
|
-
$("#Export-Excel-Button").on("click", performExport("export-to-excel", "xlsx", weight, source));
|
|
582
|
+
$("#Export-Excel-Button").on("click", performExport("export-to-excel", "xlsx", null, source));
|
|
582
583
|
};
|
|
584
|
+
const handleExportExcelModal = function () {
|
|
585
|
+
if (grnState.mode === NETWORK_GRN_MODE) {
|
|
586
|
+
$("#exportExcelForm").remove();
|
|
587
|
+
$("#exportExcelFooter").remove();
|
|
588
|
+
$("#exportExcelQuestions-containter").append(createHTMLforGRNForm);
|
|
589
|
+
$("#exportExcelFooter-container").append(createHTMLforModalButtons());
|
|
590
|
+
$("#Export-Excel-Button").prop("value", "Export Workbook");
|
|
591
|
+
$("#exportExcelExpressionSources").html("Select the Expression Data Source:");
|
|
592
|
+
$("#exportExcelExpressionSource-userInput").html(grnState.name);
|
|
593
|
+
$("#exportExcelWorkbookSheets").html("Select Workbook Sheets to Export:");
|
|
594
|
+
let source = $("input[name=expressionSource]:checked")[0].value;
|
|
595
|
+
$("#exportExcelForm").on("change", function () {
|
|
596
|
+
const selectedValue = $("input[name=expressionSource]:checked")[0].value;
|
|
597
|
+
if (selectedValue !== source) {
|
|
598
|
+
source = selectedValue;
|
|
599
|
+
$(".export-excel-workbook-sheet-option-subheader").remove();
|
|
600
|
+
handleExpressionSheetsFromSource(source);
|
|
601
|
+
}
|
|
602
|
+
});
|
|
603
|
+
handleExpressionSheetsFromSource(source);
|
|
604
|
+
} else if (grnState.mode === NETWORK_PPI_MODE) {
|
|
605
|
+
const source = "userInput";
|
|
606
|
+
$("#exportExcelForm").remove();
|
|
607
|
+
$("#exportExcelFooter").remove();
|
|
608
|
+
$("#exportExcelQuestions-containter").append(createHTMLforProteinProteinPhysicalInteractionForm);
|
|
609
|
+
$("#exportExcelFooter-container").append(createHTMLforModalButtons());
|
|
610
|
+
$("#Export-Excel-Button").prop("value", "Export Workbook");
|
|
611
|
+
$("#exportExcelWorkbookSheets").html("Select Workbook Sheets to Export:");
|
|
612
|
+
handleWorkbookSheetCheckboxBehaviour();
|
|
613
|
+
$("#Export-Excel-Button").on("click", performExport("export-to-excel", "xlsx", null, source));
|
|
614
|
+
|
|
615
|
+
}
|
|
616
|
+
};
|
|
617
|
+
|
|
618
|
+
|
|
583
619
|
|
|
584
620
|
var displayExportExcelModal = function () {
|
|
585
621
|
handleExportExcelModal();
|
|
586
|
-
$("#Export-Excel-Button-Continue").on("click", () => handleExportExcelButtonContinue());
|
|
622
|
+
// $("#Export-Excel-Button-Continue").on("click", () => handleExportExcelButtonContinue());
|
|
587
623
|
$("#exportExcelModal").modal("show");
|
|
588
624
|
};
|
|
589
625
|
|