gnosys 4.0.0

package/dist/lib/dashboard.js

@@ -0,0 +1,314 @@
+/**
+ * Gnosys Dashboard — Aggregated system status in a pretty terminal display.
+ * Combines memory stats, maintenance health, graph stats, and LLM routing.
+ */
+import { resolveTaskModel, ALL_PROVIDERS, } from "./config.js";
+import { isProviderAvailable } from "./llm.js";
+import { GnosysEmbeddings } from "./embeddings.js";
+import fs from "fs/promises";
+import path from "path";
+// ─── Data Collection ────────────────────────────────────────────────────
+export async function collectDashboardData(resolver, config, version, gnosysDb) {
+    const stores = resolver.getStores();
+    // v2.0: GnosysDB stats
+    let gnosysDbData = null;
+    if (gnosysDb?.isAvailable() && gnosysDb?.isMigrated()) {
+        const counts = gnosysDb.getMemoryCount();
+        const embCount = gnosysDb.getAllEmbeddings().length;
+        const categories = gnosysDb.getCategories();
+        gnosysDbData = {
+            migrated: true,
+            schemaVersion: gnosysDb.getSchemaVersion(),
+            activeCount: counts.active,
+            archivedCount: counts.archived,
+            totalCount: counts.total,
+            embeddingCount: embCount,
+            categories,
+        };
+    }
+    // Memory counts
+    const storeData = [];
+    let totalMemories = 0;
+    for (const s of stores) {
+        const memories = await s.store.getAllMemories();
+        storeData.push({ label: s.label, path: s.path, memoryCount: memories.length });
+        totalMemories += memories.length;
+    }
+    // Archive stats
+    let archive = null;
+    if (stores.length > 0) {
+        try {
+            const { GnosysArchive, getArchiveEligible } = await import("./archive.js");
+            const arch = new GnosysArchive(stores[0].path);
+            if (arch.isAvailable()) {
+                const stats = arch.getStats();
+                // Count eligible for archiving
+                const allMems = await stores[0].store.getAllMemories();
+                const eligible = getArchiveEligible(allMems, config);
+                archive = {
+                    totalArchived: stats.totalArchived,
+                    dbSizeMB: stats.dbSizeMB,
+                    archiveEligible: eligible.length,
+                };
+                arch.close();
+            }
+        }
+        catch {
+            // Archive not available
+        }
+    }
+    // Maintenance health
+    let maintenance = null;
+    if (stores.length > 0) {
+        try {
+            const { GnosysMaintenanceEngine } = await import("./maintenance.js");
+            const engine = new GnosysMaintenanceEngine(resolver, config);
+            const health = await engine.getHealthReport();
+            maintenance = {
+                staleCount: health.staleCount,
+                avgConfidence: health.avgConfidence,
+                avgDecayedConfidence: health.avgDecayedConfidence,
+                neverReinforced: health.neverReinforced,
+                totalReinforcements: health.totalReinforcements,
+            };
+        }
+        catch {
+            // Maintenance not available
+        }
+    }
+    // Embeddings
+    let embeddings = null;
+    if (stores.length > 0) {
+        try {
+            const emb = new GnosysEmbeddings(stores[0].path);
+            const stats = emb.getStats();
+            if (stats.count > 0) {
+                embeddings = { count: stats.count, dbSizeMB: stats.dbSizeMB };
+            }
+        }
+        catch {
+            // Embeddings not initialized
+        }
+    }
+    // Graph stats
+    let graph = null;
+    if (stores.length > 0) {
+        try {
+            const graphPath = path.join(stores[0].path, "graph.json");
+            const raw = await fs.readFile(graphPath, "utf-8");
+            const graphData = JSON.parse(raw);
+            const nodes = graphData.nodes?.length || 0;
+            const edges = graphData.edges?.length || 0;
+            const orphans = graphData.nodes?.filter((n) => n.edges === 0).length || 0;
+            const sorted = [...(graphData.nodes || [])].sort((a, b) => b.edges - a.edges);
+            const mostConnected = sorted.length > 0 ? sorted[0].id : null;
+            graph = { nodes, edges, orphans, mostConnected };
+        }
+        catch {
+            // No graph file
+        }
+    }
+    // SOC status
+    const structuring = resolveTaskModel(config, "structuring");
+    const synthesis = resolveTaskModel(config, "synthesis");
+    const providerStatus = [];
+    for (const p of ALL_PROVIDERS) {
+        const status = isProviderAvailable(config, p);
+        providerStatus.push({
+            name: p,
+            available: status.available,
+            note: status.available ? "ready" : (status.error || "not configured"),
+        });
+    }
+    // Performance benchmarks (quick probe of search/archive latency)
+    let performance = null;
+    if (stores.length > 0) {
+        try {
+            const { GnosysSearch: SearchClass } = await import("./search.js");
+            const testSearch = new SearchClass(stores[0].path);
+            await testSearch.addStoreMemories(stores[0].store);
+            // Active search benchmark
+            const t1 = Date.now();
+            testSearch.search("test benchmark probe", 5);
+            const activeSearchMs = Date.now() - t1;
+            // Archive search benchmark
+            let archiveSearchMs = 0;
+            try {
+                const { GnosysArchive: ArchClass } = await import("./archive.js");
+                const arch = new ArchClass(stores[0].path);
+                if (arch.isAvailable()) {
+                    const t2 = Date.now();
+                    arch.searchArchive("test benchmark probe", 5);
+                    archiveSearchMs = Date.now() - t2;
+                    arch.close();
+                }
+            }
+            catch {
+                // Archive not available
+            }
+            // Recall benchmark (active search only)
+            const t3 = Date.now();
+            testSearch.discover("test benchmark probe", 8);
+            const recallMs = Date.now() - t3;
+            performance = { activeSearchMs, archiveSearchMs, recallMs };
+        }
+        catch {
+            // Performance probe failed
+        }
+    }
+    return {
+        stores: storeData,
+        totalMemories,
+        gnosysDb: gnosysDbData,
+        archive,
+        maintenance,
+        embeddings,
+        graph,
+        soc: {
+            defaultProvider: config.llm.defaultProvider,
+            structuring,
+            synthesis,
+            providerStatus,
+        },
+        recall: {
+            aggressive: config.recall?.aggressive !== false,
+            maxMemories: config.recall?.maxMemories ?? 8,
+            minRelevance: config.recall?.minRelevance ?? 0.4,
+        },
+        performance,
+        version,
+    };
+}
+// ─── Pretty Terminal Formatting ─────────────────────────────────────────
+export function formatDashboard(data) {
+    const lines = [];
+    lines.push("╔══════════════════════════════════════════════════════╗");
+    lines.push(`║          GNOSYS DASHBOARD  v${data.version.padEnd(24)}║`);
+    lines.push("╠══════════════════════════════════════════════════════╣");
+    // v2.0 GnosysDB stats (show first when available)
+    if (data.gnosysDb) {
+        lines.push("║  GNOSYS DB (v2.0 AGENT-NATIVE CORE)                ║");
+        lines.push("╟──────────────────────────────────────────────────────╢");
+        const schema = `  Schema v${data.gnosysDb.schemaVersion} — migrated ✓`.padEnd(53);
+        lines.push(`║${schema}║`);
+        const counts = `  Active: ${data.gnosysDb.activeCount} | Archived: ${data.gnosysDb.archivedCount} | Total: ${data.gnosysDb.totalCount}`.padEnd(53);
+        lines.push(`║${counts}║`);
+        const emb = `  Embeddings: ${data.gnosysDb.embeddingCount} inline vectors`.padEnd(53);
+        lines.push(`║${emb}║`);
+        const cats = `  Categories: ${data.gnosysDb.categories.join(", ")}`.substring(0, 53).padEnd(53);
+        lines.push(`║${cats}║`);
+        lines.push("╟──────────────────────────────────────────────────────╢");
+    }
+    // Memory Stats
+    lines.push("║  MEMORY STORES                                      ║");
+    lines.push("╟──────────────────────────────────────────────────────╢");
+    for (const s of data.stores) {
+        const label = `  ${s.label}: ${s.memoryCount} memories`.padEnd(53);
+        lines.push(`║${label}║`);
+    }
+    const total = `  Total: ${data.totalMemories} active memories`.padEnd(53);
+    lines.push(`║${total}║`);
+    // Archive (Two-Tier Memory)
+    if (data.archive) {
+        lines.push("╟──────────────────────────────────────────────────────╢");
+        lines.push("║  ARCHIVE (TWO-TIER MEMORY)                          ║");
+        lines.push("╟──────────────────────────────────────────────────────╢");
+        const archived = `  Archived: ${data.archive.totalArchived} memories (${data.archive.dbSizeMB.toFixed(1)} MB)`.padEnd(53);
+        lines.push(`║${archived}║`);
+        const eligible = `  Eligible for archiving: ${data.archive.archiveEligible}`.padEnd(53);
+        lines.push(`║${eligible}║`);
+    }
+    // Maintenance Health
+    if (data.maintenance) {
+        lines.push("╟──────────────────────────────────────────────────────╢");
+        lines.push("║  MAINTENANCE HEALTH                                 ║");
+        lines.push("╟──────────────────────────────────────────────────────╢");
+        const m = data.maintenance;
+        const conf = `  Confidence: ${m.avgConfidence.toFixed(3)} raw / ${m.avgDecayedConfidence.toFixed(3)} decayed`.padEnd(53);
+        lines.push(`║${conf}║`);
+        const stale = `  Stale: ${m.staleCount} | Never reinforced: ${m.neverReinforced}`.padEnd(53);
+        lines.push(`║${stale}║`);
+        const reinf = `  Total reinforcements: ${m.totalReinforcements}`.padEnd(53);
+        lines.push(`║${reinf}║`);
+    }
+    // Embeddings
+    lines.push("╟──────────────────────────────────────────────────────╢");
+    lines.push("║  EMBEDDINGS                                         ║");
+    lines.push("╟──────────────────────────────────────────────────────╢");
+    if (data.embeddings) {
+        const emb = `  ${data.embeddings.count} vectors (${data.embeddings.dbSizeMB.toFixed(1)} MB)`.padEnd(53);
+        lines.push(`║${emb}║`);
+    }
+    else {
+        lines.push("║  Not initialized (run gnosys reindex)               ║");
+    }
+    // Graph
+    lines.push("╟──────────────────────────────────────────────────────╢");
+    lines.push("║  WIKILINK GRAPH                                     ║");
+    lines.push("╟──────────────────────────────────────────────────────╢");
+    if (data.graph) {
+        const g = data.graph;
+        const stats = `  ${g.nodes} nodes, ${g.edges} edges, ${g.orphans} orphans`.padEnd(53);
+        lines.push(`║${stats}║`);
+        if (g.mostConnected) {
+            const mc = `  Most connected: ${g.mostConnected}`.substring(0, 53).padEnd(53);
+            lines.push(`║${mc}║`);
+        }
+    }
+    else {
+        lines.push("║  Not built (run gnosys reindex-graph)               ║");
+    }
+    // Recall
+    lines.push("╟──────────────────────────────────────────────────────╢");
+    lines.push("║  RECALL (AUTOMATIC MEMORY INJECTION)                ║");
+    lines.push("╟──────────────────────────────────────────────────────╢");
+    const recallMode = data.recall.aggressive ? "aggressive" : "filtered";
+    const recallLine = `  Mode: ${recallMode} | Max: ${data.recall.maxMemories} | Min relevance: ${data.recall.minRelevance}`.padEnd(53);
+    lines.push(`║${recallLine}║`);
+    // SOC
+    lines.push("╟──────────────────────────────────────────────────────╢");
+    lines.push("║  SYSTEM OF COGNITION (SOC)                          ║");
+    lines.push("╟──────────────────────────────────────────────────────╢");
+    const defP = `  Default: ${data.soc.defaultProvider}`.padEnd(53);
+    lines.push(`║${defP}║`);
+    const strLine = `  Structuring → ${data.soc.structuring.provider}/${data.soc.structuring.model}`.substring(0, 53).padEnd(53);
+    lines.push(`║${strLine}║`);
+    const synLine = `  Synthesis   → ${data.soc.synthesis.provider}/${data.soc.synthesis.model}`.substring(0, 53).padEnd(53);
+    lines.push(`║${synLine}║`);
+    lines.push("║                                                      ║");
+    for (const p of data.soc.providerStatus) {
+        const icon = p.available ? "✓" : "—";
+        // Shorten common error messages to fit the box
+        let note = p.note;
+        if (note.includes("Add to environment or gnosys.json")) {
+            note = "no API key";
+        }
+        const pLine = `  ${icon} ${p.name}: ${note}`.substring(0, 53).padEnd(53);
+        lines.push(`║${pLine}║`);
+    }
+    // Performance
+    if (data.performance) {
+        lines.push("╟──────────────────────────────────────────────────────╢");
+        lines.push("║  PERFORMANCE (ENTERPRISE)                           ║");
+        lines.push("╟──────────────────────────────────────────────────────╢");
+        const perf = data.performance;
+        const recallLine = `  Recall: ${perf.recallMs}ms${perf.recallMs > 50 ? " ⚠ SLOW" : " ✓"}`.padEnd(53);
+        lines.push(`║${recallLine}║`);
+        const activeLine = `  Active search: ${perf.activeSearchMs}ms`.padEnd(53);
+        lines.push(`║${activeLine}║`);
+        const archiveLine = `  Archive search: ${perf.archiveSearchMs}ms`.padEnd(53);
+        lines.push(`║${archiveLine}║`);
+        if (perf.recallMs > 50) {
+            lines.push("║  ⚠ Recall exceeds 50ms target for enterprise use   ║");
+        }
+    }
+    lines.push("╚══════════════════════════════════════════════════════╝");
+    return lines.join("\n");
+}
+/**
+ * Format dashboard data as structured JSON for MCP tool consumption.
+ */
+export function formatDashboardJSON(data) {
+    return JSON.stringify(data, null, 2);
+}
+//# sourceMappingURL=dashboard.js.map

package/dist/lib/dashboard.js.map

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package/dist/lib/db.d.ts

@@ -0,0 +1,182 @@
+/**
+ * Gnosys DB — Agent-native SQLite core.
+ *
+ * v2.0: Single gnosys.db per project (.gnosys/gnosys.db)
+ * v3.0: Central gnosys.db at ~/.gnosys/gnosys.db with project_id + scope columns
+ *
+ * 5 tables: memories, memories_fts, relationships, summaries, audit_log.
+ * + projects table (v3.0) for project identity registry.
+ */
+export interface DbMemory {
+    id: string;
+    title: string;
+    category: string;
+    content: string;
+    summary: string | null;
+    tags: string;
+    relevance: string;
+    author: string;
+    authority: string;
+    confidence: number;
+    reinforcement_count: number;
+    content_hash: string;
+    status: string;
+    tier: string;
+    supersedes: string | null;
+    superseded_by: string | null;
+    last_reinforced: string | null;
+    created: string;
+    modified: string;
+    embedding: Buffer | null;
+    source_path: string | null;
+    project_id: string | null;
+    scope: string;
+}
+/** v3.0: Project identity stored in central DB */
+export interface DbProject {
+    id: string;
+    name: string;
+    working_directory: string;
+    user: string;
+    agent_rules_target: string | null;
+    obsidian_vault: string | null;
+    created: string;
+    modified: string;
+}
+export type MemoryScope = "project" | "user" | "global";
+export interface DbRelationship {
+    source_id: string;
+    target_id: string;
+    rel_type: string;
+    label: string | null;
+    confidence: number;
+    created: string;
+}
+export interface DbSummary {
+    id: string;
+    scope: string;
+    scope_key: string;
+    content: string;
+    source_ids: string;
+    created: string;
+    modified: string;
+}
+export interface DbAuditEntry {
+    id: number;
+    timestamp: string;
+    operation: string;
+    memory_id: string | null;
+    details: string | null;
+    duration_ms: number | null;
+    trace_id: string | null;
+}
+export interface MigrationStats {
+    memoriesMigrated: number;
+    archiveMigrated: number;
+    relationshipsCreated: number;
+    ftsBuild: boolean;
+}
+declare function fnv1a(str: string): string;
+export declare class GnosysDB {
+    private db;
+    private storePath;
+    private available;
+    private dbFilePath;
+    /**
+     * Get the central DB directory (~/.gnosys/).
+     * Creates it if it doesn't exist.
+     */
+    static getCentralDbDir(): string;
+    /**
+     * Get the central DB file path (~/.gnosys/gnosys.db).
+     */
+    static getCentralDbPath(): string;
+    /**
+     * Open the central DB at ~/.gnosys/gnosys.db.
+     * Creates ~/.gnosys/ directory if needed.
+     */
+    static openCentral(): GnosysDB;
+    constructor(storePath: string, opts?: {
+        retries?: number;
+        retryDelayMs?: number;
+    });
+    /**
+     * Create a backup of the database file.
+     * Returns the backup file path.
+     */
+    backup(backupDir?: string): Promise<string>;
+    /**
+     * Restore from a backup file. Closes current DB, copies backup over, re-opens.
+     */
+    static restore(backupPath: string, targetDir?: string): GnosysDB;
+    private applySchema;
+    /**
+     * Incremental schema migration.
+     * Each version bump adds columns/tables without dropping existing data.
+     */
+    private migrateSchema;
+    isAvailable(): boolean;
+    getDbPath(): string;
+    getStorePath(): string;
+    insertMemory(mem: Omit<DbMemory, "embedding"> & {
+        embedding?: Buffer | null;
+    }): void;
+    getMemory(id: string): DbMemory | null;
+    getActiveMemories(): DbMemory[];
+    getAllMemories(): DbMemory[];
+    getMemoriesByTier(tier: string): DbMemory[];
+    getMemoriesByCategory(category: string): DbMemory[];
+    updateMemory(id: string, updates: Partial<DbMemory>): void;
+    deleteMemory(id: string): void;
+    getMemoryCount(): {
+        active: number;
+        archived: number;
+        total: number;
+    };
+    getCategories(): string[];
+    /**
+     * Get active memories scoped to a specific project.
+     */
+    getMemoriesByProject(projectId: string): DbMemory[];
+    /**
+     * Get memories by scope (project, user, global).
+     */
+    getMemoriesByScope(scope: MemoryScope): DbMemory[];
+    insertProject(project: DbProject): void;
+    getProject(id: string): DbProject | null;
+    getProjectByDirectory(dir: string): DbProject | null;
+    getAllProjects(): DbProject[];
+    updateProject(id: string, updates: Partial<DbProject>): void;
+    searchFts(query: string, limit?: number): Array<{
+        id: string;
+        title: string;
+        snippet: string;
+        rank: number;
+    }>;
+    discoverFts(query: string, limit?: number): Array<{
+        id: string;
+        title: string;
+        relevance: string;
+        rank: number;
+    }>;
+    insertRelationship(rel: DbRelationship): void;
+    getRelationshipsFrom(id: string): DbRelationship[];
+    getRelationshipsTo(id: string): DbRelationship[];
+    upsertSummary(summary: DbSummary): void;
+    getSummary(scope: string, scopeKey: string): DbSummary | null;
+    getAllSummaries(): DbSummary[];
+    logAudit(entry: Omit<DbAuditEntry, "id">): void;
+    updateEmbedding(id: string, embedding: Buffer): void;
+    getEmbedding(id: string): Buffer | null;
+    getAllEmbeddings(): Array<{
+        id: string;
+        embedding: Buffer;
+    }>;
+    getEmbeddingCount(): number;
+    transaction<T>(fn: () => T): T;
+    close(): void;
+    isMigrated(): boolean;
+    getSchemaVersion(): number;
+}
+export { fnv1a };
+//# sourceMappingURL=db.d.ts.map

package/dist/lib/db.d.ts.map

@@ -0,0 +1 @@
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