docrev 0.8.1 → 0.8.5

package/dist/lib/commands/history.js

@@ -0,0 +1,245 @@
+/**
+ * History commands: diff, history, contributors
+ *
+ * Commands for git-based revision tracking and author statistics.
+ */
+import { chalk, fs, fmt, loadBuildConfig, } from './context.js';
+/**
+ * Register history commands with the program
+ */
+export function register(program) {
+    // ==========================================================================
+    // DIFF command - Compare sections against git history
+    // ==========================================================================
+    program
+        .command('diff')
+        .description('Compare sections against git history')
+        .argument('[ref]', 'Git reference to compare against (default: main/master)')
+        .option('-f, --files <files>', 'Specific files to compare (comma-separated)')
+        .option('--stat', 'Show only statistics, not full diff')
+        .action(async (ref, options) => {
+        const { isGitRepo, getDefaultBranch, getCurrentBranch, getChangedFiles, getWordCountDiff, compareFileVersions, } = await import('../git.js');
+        if (!isGitRepo()) {
+            console.error(fmt.status('error', 'Not a git repository'));
+            process.exit(1);
+        }
+        const compareRef = ref || getDefaultBranch();
+        const currentBranch = getCurrentBranch();
+        console.log(fmt.header('Git Diff'));
+        console.log(chalk.dim(`  Comparing: ${compareRef} → ${currentBranch || 'HEAD'}`));
+        console.log();
+        // Get files to compare
+        let filesToCompare;
+        if (options.files) {
+            filesToCompare = options.files.split(',').map(f => f.trim());
+        }
+        else {
+            // Default to markdown section files
+            filesToCompare = fs.readdirSync('.').filter(f => f.endsWith('.md') && !['README.md', 'CLAUDE.md'].includes(f));
+        }
+        if (filesToCompare.length === 0) {
+            console.log(fmt.status('info', 'No markdown files found'));
+            return;
+        }
+        // Get changed files from git
+        const changedFiles = getChangedFiles(compareRef);
+        const changedSet = new Set(changedFiles.map(f => f.file));
+        // Get word count differences
+        const { total, byFile } = getWordCountDiff(filesToCompare, compareRef);
+        // Show results
+        const rows = [];
+        for (const file of filesToCompare) {
+            const stats = byFile[file];
+            if (stats && (stats.added > 0 || stats.removed > 0)) {
+                const status = changedSet.has(file)
+                    ? changedFiles.find(f => f.file === file)?.status || 'modified'
+                    : 'unchanged';
+                rows.push([
+                    file,
+                    status,
+                    chalk.green(`+${stats.added}`),
+                    chalk.red(`-${stats.removed}`),
+                ]);
+            }
+        }
+        if (rows.length === 0) {
+            console.log(fmt.status('success', 'No changes detected'));
+            return;
+        }
+        console.log(fmt.table(['File', 'Status', 'Added', 'Removed'], rows));
+        console.log();
+        console.log(chalk.dim(`Total: ${chalk.green(`+${total.added}`)} words, ${chalk.red(`-${total.removed}`)} words`));
+        // Show detailed diff if not --stat
+        if (!options.stat && rows.length > 0) {
+            console.log();
+            console.log(chalk.cyan('Changed sections:'));
+            for (const file of filesToCompare) {
+                const stats = byFile[file];
+                if (stats && (stats.added > 0 || stats.removed > 0)) {
+                    const { changes } = compareFileVersions(file, compareRef);
+                    console.log(chalk.bold(`\n  ${file}:`));
+                    // Show first few significant changes
+                    let shown = 0;
+                    for (const change of changes) {
+                        if (shown >= 3) {
+                            console.log(chalk.dim('    ...'));
+                            break;
+                        }
+                        const preview = change.value.slice(0, 60).replace(/\n/g, ' ');
+                        if (change.added) {
+                            console.log(chalk.green(`    + "${preview}..."`));
+                        }
+                        else if (change.removed) {
+                            console.log(chalk.red(`    - "${preview}..."`));
+                        }
+                        shown++;
+                    }
+                }
+            }
+        }
+    });
+    // ==========================================================================
+    // HISTORY command - Show revision history
+    // ==========================================================================
+    program
+        .command('history')
+        .description('Show revision history for section files')
+        .argument('[file]', 'Specific file (default: all sections)')
+        .option('-n, --limit <count>', 'Number of commits to show', '10')
+        .action(async (file, options) => {
+        const { isGitRepo, getFileHistory, getRecentCommits, hasUncommittedChanges, } = await import('../git.js');
+        if (!isGitRepo()) {
+            console.error(fmt.status('error', 'Not a git repository'));
+            process.exit(1);
+        }
+        const limit = parseInt(options.limit) || 10;
+        console.log(fmt.header('Revision History'));
+        console.log();
+        if (file) {
+            // Show history for specific file
+            if (!fs.existsSync(file)) {
+                console.error(fmt.status('error', `File not found: ${file}`));
+                process.exit(1);
+            }
+            const history = getFileHistory(file, limit);
+            if (history.length === 0) {
+                console.log(fmt.status('info', 'No history found (file may not be committed)'));
+                return;
+            }
+            console.log(chalk.cyan(`History for ${file}:`));
+            console.log();
+            for (const commit of history) {
+                const date = new Date(commit.date).toLocaleDateString();
+                console.log(`  ${chalk.yellow(commit.hash)} ${chalk.dim(date)}`);
+                console.log(`    ${commit.message}`);
+            }
+        }
+        else {
+            // Show recent commits affecting any file
+            const commits = getRecentCommits(limit);
+            if (commits.length === 0) {
+                console.log(fmt.status('info', 'No commits found'));
+                return;
+            }
+            if (hasUncommittedChanges()) {
+                console.log(chalk.yellow('  * Uncommitted changes'));
+                console.log();
+            }
+            for (const commit of commits) {
+                const date = new Date(commit.date).toLocaleDateString();
+                console.log(`  ${chalk.yellow(commit.hash)} ${chalk.dim(date)} ${chalk.blue(commit.author)}`);
+                console.log(`    ${commit.message}`);
+            }
+        }
+    });
+    // ==========================================================================
+    // CONTRIBUTORS command - Show who wrote what
+    // ==========================================================================
+    program
+        .command('contributors')
+        .alias('authors')
+        .description('Show author contributions across section files')
+        .argument('[file]', 'Specific file (default: all sections)')
+        .option('--blame', 'Show detailed line-by-line blame for a file')
+        .action(async (file, options) => {
+        const { isGitRepo, getAuthorStats, getContributors, getFileBlame } = await import('../git.js');
+        if (!isGitRepo()) {
+            console.error(fmt.status('error', 'Not a git repository'));
+            process.exit(1);
+        }
+        console.log(fmt.header('Contributors'));
+        console.log();
+        if (file) {
+            // Show stats for specific file
+            if (!fs.existsSync(file)) {
+                console.error(fmt.status('error', `File not found: ${file}`));
+                process.exit(1);
+            }
+            if (options.blame) {
+                // Detailed blame output
+                const blame = getFileBlame(file);
+                if (blame.length === 0) {
+                    console.log(fmt.status('info', 'No git history (file may not be committed)'));
+                    return;
+                }
+                console.log(chalk.cyan(`Blame for ${file}:`));
+                console.log();
+                for (const entry of blame) {
+                    const authorShort = entry.author.slice(0, 15).padEnd(15);
+                    const content = entry.content.length > 60 ? entry.content.slice(0, 60) + '...' : entry.content;
+                    console.log(`  ${chalk.dim(entry.hash)} ${chalk.blue(authorShort)} ${chalk.dim(`L${String(entry.line).padStart(3)}`)} ${content}`);
+                }
+            }
+            else {
+                // Summary stats
+                const stats = getAuthorStats(file);
+                if (Object.keys(stats).length === 0) {
+                    console.log(fmt.status('info', 'No git history (file may not be committed)'));
+                    return;
+                }
+                console.log(chalk.cyan(`Authors for ${file}:`));
+                console.log();
+                const sorted = Object.entries(stats).sort((a, b) => b[1].lines - a[1].lines);
+                for (const [author, data] of sorted) {
+                    const bar = '█'.repeat(Math.ceil(data.percentage / 5));
+                    console.log(`  ${chalk.blue(author.padEnd(25))} ${chalk.dim(String(data.lines).padStart(4))} lines ${chalk.green(bar)} ${data.percentage}%`);
+                }
+            }
+        }
+        else {
+            // Show contributors across all sections
+            let config = {};
+            try {
+                config = loadBuildConfig(process.cwd()) || {};
+            }
+            catch {
+                // Not in a rev project
+            }
+            let sections = config.sections || [];
+            if (sections.length === 0) {
+                sections = fs.readdirSync('.').filter(f => f.endsWith('.md') && !['README.md', 'CLAUDE.md', 'paper.md'].includes(f));
+            }
+            if (sections.length === 0) {
+                console.error(fmt.status('error', 'No section files found'));
+                process.exit(1);
+            }
+            const contributors = getContributors(sections);
+            if (Object.keys(contributors).length === 0) {
+                console.log(fmt.status('info', 'No git history found'));
+                return;
+            }
+            const sorted = Object.entries(contributors).sort((a, b) => b[1].lines - a[1].lines);
+            const totalLines = sorted.reduce((sum, [, data]) => sum + data.lines, 0);
+            console.log(chalk.cyan('Project contributors:'));
+            console.log();
+            for (const [author, data] of sorted) {
+                const pct = Math.round((data.lines / totalLines) * 100);
+                const bar = '█'.repeat(Math.ceil(pct / 5));
+                console.log(`  ${chalk.blue(author.padEnd(25))} ${chalk.dim(String(data.lines).padStart(5))} lines  ${chalk.dim(String(data.files))} files ${chalk.green(bar)} ${pct}%`);
+            }
+            console.log();
+            console.log(chalk.dim(`  Total: ${totalLines} lines across ${sections.length} files`));
+        }
+    });
+}
+//# sourceMappingURL=history.js.map

package/dist/lib/commands/history.js.map

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package/dist/lib/commands/index.d.ts

@@ -0,0 +1,28 @@
+/**
+ * Command module index
+ *
+ * Exports registration functions for all command modules.
+ * Each module's register() function adds commands to the Commander program.
+ */
+import type { Command } from 'commander';
+import { register as registerCoreCommands } from './core.js';
+import { register as registerCommentCommands } from './comments.js';
+import { register as registerInitCommands } from './init.js';
+import { register as registerSectionCommands } from './sections.js';
+import { register as registerBuildCommands } from './build.js';
+import { register as registerResponseCommands } from './response.js';
+import { register as registerCitationCommands } from './citations.js';
+import { register as registerDoiCommands } from './doi.js';
+import { register as registerHistoryCommands } from './history.js';
+import { register as registerUtilityCommands } from './utilities.js';
+export { registerCoreCommands, registerCommentCommands, registerInitCommands, registerSectionCommands, registerBuildCommands, registerResponseCommands, registerCitationCommands, registerDoiCommands, registerHistoryCommands, registerUtilityCommands, };
+export { setQuietMode, setJsonMode, quietMode, jsonMode, } from './context.js';
+interface PackageJson {
+    version?: string;
+    [key: string]: unknown;
+}
+/**
+ * Register all command modules with the program.
+ */
+export declare function registerAllCommands(program: Command, pkg?: PackageJson): void;
+//# sourceMappingURL=index.d.ts.map

package/dist/lib/commands/index.d.ts.map

@@ -0,0 +1 @@
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package/dist/lib/commands/index.js

@@ -0,0 +1,35 @@
+/**
+ * Command module index
+ *
+ * Exports registration functions for all command modules.
+ * Each module's register() function adds commands to the Commander program.
+ */
+import { register as registerCoreCommands } from './core.js';
+import { register as registerCommentCommands } from './comments.js';
+import { register as registerInitCommands } from './init.js';
+import { register as registerSectionCommands } from './sections.js';
+import { register as registerBuildCommands } from './build.js';
+import { register as registerResponseCommands } from './response.js';
+import { register as registerCitationCommands } from './citations.js';
+import { register as registerDoiCommands } from './doi.js';
+import { register as registerHistoryCommands } from './history.js';
+import { register as registerUtilityCommands } from './utilities.js';
+export { registerCoreCommands, registerCommentCommands, registerInitCommands, registerSectionCommands, registerBuildCommands, registerResponseCommands, registerCitationCommands, registerDoiCommands, registerHistoryCommands, registerUtilityCommands, };
+// Re-export context utilities for use by the main CLI
+export { setQuietMode, setJsonMode, quietMode, jsonMode, } from './context.js';
+/**
+ * Register all command modules with the program.
+ */
+export function registerAllCommands(program, pkg) {
+    registerCoreCommands(program);
+    registerCommentCommands(program);
+    registerInitCommands(program);
+    registerSectionCommands(program);
+    registerBuildCommands(program, pkg || {});
+    registerResponseCommands(program);
+    registerCitationCommands(program);
+    registerDoiCommands(program);
+    registerHistoryCommands(program);
+    registerUtilityCommands(program, pkg || {});
+}
+//# sourceMappingURL=index.js.map

package/dist/lib/commands/index.js.map

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package/dist/lib/commands/init.d.ts

@@ -0,0 +1,11 @@
+/**
+ * Init commands: init, new, config
+ *
+ * Project initialization and configuration commands.
+ */
+import type { Command } from 'commander';
+/**
+ * Register init commands with the program
+ */
+export declare function register(program: Command): void;
+//# sourceMappingURL=init.d.ts.map

package/dist/lib/commands/init.d.ts.map

@@ -0,0 +1 @@
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package/dist/lib/commands/init.js

@@ -0,0 +1,209 @@
+/**
+ * Init commands: init, new, config
+ *
+ * Project initialization and configuration commands.
+ */
+import { chalk, fs, path, generateConfig, saveConfig, getTemplate, listTemplates, generateCustomTemplate, getUserName, setUserName, getConfigPath, getDefaultSections, setDefaultSections, } from './context.js';
+/**
+ * Register init commands with the program
+ */
+export function register(program) {
+    // ==========================================================================
+    // INIT command - Generate sections.yaml config
+    // ==========================================================================
+    program
+        .command('init')
+        .description('Generate sections.yaml from existing .md files')
+        .option('-d, --dir <directory>', 'Directory to scan', '.')
+        .option('-o, --output <file>', 'Output config file', 'sections.yaml')
+        .option('--force', 'Overwrite existing config')
+        .action((options) => {
+        const dir = path.resolve(options.dir);
+        if (!fs.existsSync(dir)) {
+            console.error(chalk.red(`Directory not found: ${dir}`));
+            process.exit(1);
+        }
+        const outputPath = path.resolve(options.dir, options.output);
+        if (fs.existsSync(outputPath) && !options.force) {
+            console.error(chalk.yellow(`Config already exists: ${outputPath}`));
+            console.error(chalk.dim('Use --force to overwrite'));
+            process.exit(1);
+        }
+        console.log(chalk.cyan(`Scanning ${dir} for .md files...`));
+        const config = generateConfig(dir);
+        const sectionCount = Object.keys(config.sections).length;
+        if (sectionCount === 0) {
+            console.error(chalk.yellow('No .md files found (excluding paper.md, README.md)'));
+            process.exit(1);
+        }
+        saveConfig(outputPath, config);
+        console.log(chalk.green(`\nCreated ${outputPath} with ${sectionCount} sections:\n`));
+        for (const [file, section] of Object.entries(config.sections)) {
+            console.log(`  ${chalk.bold(file)}`);
+            console.log(chalk.dim(`    header: "${section.header}"`));
+            if (section.aliases && section.aliases.length > 0) {
+                console.log(chalk.dim(`    aliases: ${JSON.stringify(section.aliases)}`));
+            }
+        }
+        console.log(chalk.cyan('\nEdit this file to:'));
+        console.log(chalk.dim('  • Add aliases for header variations'));
+        console.log(chalk.dim('  • Adjust order if needed'));
+        console.log(chalk.dim('  • Update headers if they change'));
+    });
+    // ==========================================================================
+    // NEW command - Create new paper project
+    // ==========================================================================
+    program
+        .command('new')
+        .description('Create a new paper project from template')
+        .argument('[name]', 'Project directory name')
+        .option('-t, --template <name>', 'Template: paper, minimal, thesis, review', 'paper')
+        .option('-s, --sections <sections>', 'Comma-separated section names (e.g., intro,methods,results)')
+        .option('--list', 'List available templates')
+        .action(async (name, options) => {
+        if (options.list) {
+            console.log(chalk.cyan('Available templates:\n'));
+            for (const t of listTemplates()) {
+                console.log(`  ${chalk.bold(t.id)} - ${t.description}`);
+            }
+            return;
+        }
+        if (!name) {
+            console.error(chalk.red('Error: project name is required'));
+            console.error(chalk.dim('Usage: rev new <name>'));
+            process.exit(1);
+        }
+        const projectDir = path.resolve(name);
+        if (fs.existsSync(projectDir)) {
+            console.error(chalk.red(`Directory already exists: ${name}`));
+            process.exit(1);
+        }
+        let template;
+        let sections = null;
+        // Determine sections: CLI option > user config > prompt
+        if (options.sections) {
+            // Parse CLI sections
+            sections = options.sections.split(',').map((s) => s.trim().toLowerCase().replace(/\.md$/, ''));
+        }
+        else {
+            // Check user config for default sections
+            const defaultSections = getDefaultSections();
+            if (defaultSections && defaultSections.length > 0) {
+                sections = defaultSections;
+            }
+        }
+        // If no sections from CLI or config, and not using a named template with --template, prompt
+        // Only prompt if stdin is a TTY (interactive terminal)
+        if (!sections && options.template === 'paper') {
+            if (process.stdin.isTTY) {
+                const rl = (await import('readline')).createInterface({
+                    input: process.stdin,
+                    output: process.stdout,
+                });
+                const ask = (prompt) => new Promise((resolve) => rl.question(prompt, resolve));
+                console.log(chalk.cyan('Enter your document sections (comma-separated):'));
+                console.log(chalk.dim('  Example: introduction,methods,results,discussion'));
+                console.log(chalk.dim('  Press Enter to use default: introduction,methods,results,discussion\n'));
+                const answer = await ask(chalk.cyan('Sections: '));
+                rl.close();
+                if (answer.trim()) {
+                    sections = answer.split(',').map((s) => s.trim().toLowerCase().replace(/\.md$/, ''));
+                }
+                else {
+                    // Use default paper template sections
+                    sections = ['introduction', 'methods', 'results', 'discussion'];
+                }
+            }
+            else {
+                // Non-interactive: use default sections
+                sections = ['introduction', 'methods', 'results', 'discussion'];
+            }
+        }
+        // Generate template based on sections
+        if (sections) {
+            template = generateCustomTemplate(sections);
+            console.log(chalk.cyan(`Creating project with sections: ${sections.join(', ')}\n`));
+        }
+        else {
+            template = getTemplate(options.template);
+            if (!template) {
+                console.error(chalk.red(`Unknown template: ${options.template}`));
+                console.error(chalk.dim('Use --list to see available templates.'));
+                process.exit(1);
+            }
+            console.log(chalk.cyan(`Creating ${template.name} project in ${name}/...\n`));
+        }
+        // Create directory
+        fs.mkdirSync(projectDir, { recursive: true });
+        // Create subdirectories
+        for (const subdir of template.directories || []) {
+            fs.mkdirSync(path.join(projectDir, subdir), { recursive: true });
+            console.log(chalk.dim(`  Created ${subdir}/`));
+        }
+        // Create files
+        for (const [filename, content] of Object.entries(template.files)) {
+            const filePath = path.join(projectDir, filename);
+            fs.writeFileSync(filePath, content, 'utf-8');
+            console.log(chalk.dim(`  Created ${filename}`));
+        }
+        console.log(chalk.green(`\nProject created!`));
+        console.log(chalk.cyan('\nNext steps:'));
+        console.log(chalk.dim(`  cd ${name}`));
+        console.log(chalk.dim('  # Edit rev.yaml with your paper details'));
+        console.log(chalk.dim('  # Write your sections'));
+        console.log(chalk.dim('  rev build          # Build PDF and DOCX'));
+        console.log(chalk.dim('  rev build pdf      # Build PDF only'));
+    });
+    // ==========================================================================
+    // CONFIG command - Set user preferences
+    // ==========================================================================
+    program
+        .command('config')
+        .description('Set user preferences')
+        .argument('<key>', 'Config key: user, sections')
+        .argument('[value]', 'Value to set')
+        .action((key, value) => {
+        if (key === 'user') {
+            if (value) {
+                setUserName(value);
+                console.log(chalk.green(`User name set to: ${value}`));
+                console.log(chalk.dim(`Saved to ${getConfigPath()}`));
+            }
+            else {
+                const name = getUserName();
+                if (name) {
+                    console.log(`Current user: ${chalk.bold(name)}`);
+                }
+                else {
+                    console.log(chalk.yellow('No user name set.'));
+                    console.log(chalk.dim('Set with: rev config user "Your Name"'));
+                }
+            }
+        }
+        else if (key === 'sections') {
+            if (value) {
+                const sections = value.split(',').map((s) => s.trim().toLowerCase().replace(/\.md$/, ''));
+                setDefaultSections(sections);
+                console.log(chalk.green(`Default sections set to: ${sections.join(', ')}`));
+                console.log(chalk.dim(`Saved to ${getConfigPath()}`));
+            }
+            else {
+                const sections = getDefaultSections();
+                if (sections && sections.length > 0) {
+                    console.log(`Default sections: ${chalk.bold(sections.join(', '))}`);
+                }
+                else {
+                    console.log(chalk.yellow('No default sections set.'));
+                    console.log(chalk.dim('Set with: rev config sections "intro,methods,results,discussion"'));
+                    console.log(chalk.dim('When not set, rev new will prompt for sections.'));
+                }
+            }
+        }
+        else {
+            console.error(chalk.red(`Unknown config key: ${key}`));
+            console.error(chalk.dim('Available keys: user, sections'));
+            process.exit(1);
+        }
+    });
+}
+//# sourceMappingURL=init.js.map

package/dist/lib/commands/init.js.map

@@ -0,0 +1 @@
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package/dist/lib/commands/response.d.ts

@@ -0,0 +1,11 @@
+/**
+ * Response commands: response, validate, profiles, anonymize
+ *
+ * Commands for generating reviewer responses and validating manuscripts.
+ */
+import type { Command } from 'commander';
+/**
+ * Register response commands with the program
+ */
+export declare function register(program: Command): void;
+//# sourceMappingURL=response.d.ts.map

package/dist/lib/commands/response.d.ts.map

@@ -0,0 +1 @@
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