docrev 0.11.3 → 0.12.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (193) hide show
  1. package/CHANGELOG.md +22 -0
  2. package/LICENSE +21 -0
  3. package/dist/bin/rev.js +29 -21
  4. package/dist/bin/rev.js.map +1 -1
  5. package/dist/lib/build.d.ts +43 -0
  6. package/dist/lib/build.d.ts.map +1 -1
  7. package/dist/lib/build.js +175 -5
  8. package/dist/lib/build.js.map +1 -1
  9. package/dist/lib/commands/build.d.ts.map +1 -1
  10. package/dist/lib/commands/build.js +39 -125
  11. package/dist/lib/commands/build.js.map +1 -1
  12. package/dist/lib/commands/comments.js +3 -3
  13. package/dist/lib/commands/comments.js.map +1 -1
  14. package/dist/lib/commands/context.d.ts +12 -1
  15. package/dist/lib/commands/context.d.ts.map +1 -1
  16. package/dist/lib/commands/context.js +34 -1
  17. package/dist/lib/commands/context.js.map +1 -1
  18. package/dist/lib/commands/merge-resolve.js +1 -1
  19. package/dist/lib/commands/merge-resolve.js.map +1 -1
  20. package/dist/lib/commands/quality.js +2 -2
  21. package/dist/lib/commands/quality.js.map +1 -1
  22. package/dist/lib/commands/sections.js +1 -1
  23. package/dist/lib/commands/sections.js.map +1 -1
  24. package/dist/lib/commands/text-ops.js +1 -1
  25. package/dist/lib/commands/text-ops.js.map +1 -1
  26. package/dist/lib/commands/utilities.d.ts.map +1 -1
  27. package/dist/lib/commands/utilities.js +5 -2
  28. package/dist/lib/commands/utilities.js.map +1 -1
  29. package/dist/lib/commands/word-tools.js +2 -2
  30. package/dist/lib/commands/word-tools.js.map +1 -1
  31. package/dist/lib/crossref.d.ts.map +1 -1
  32. package/dist/lib/crossref.js +12 -41
  33. package/dist/lib/crossref.js.map +1 -1
  34. package/dist/lib/csl.d.ts.map +1 -1
  35. package/dist/lib/csl.js +14 -22
  36. package/dist/lib/csl.js.map +1 -1
  37. package/dist/lib/diff-engine.js +1 -1
  38. package/dist/lib/diff-engine.js.map +1 -1
  39. package/dist/lib/equations.d.ts.map +1 -1
  40. package/dist/lib/equations.js +12 -3
  41. package/dist/lib/equations.js.map +1 -1
  42. package/dist/lib/errors.d.ts.map +1 -1
  43. package/dist/lib/errors.js +1 -30
  44. package/dist/lib/errors.js.map +1 -1
  45. package/dist/lib/image-registry.d.ts.map +1 -1
  46. package/dist/lib/image-registry.js +4 -0
  47. package/dist/lib/image-registry.js.map +1 -1
  48. package/dist/lib/import.d.ts +1 -1
  49. package/dist/lib/import.d.ts.map +1 -1
  50. package/dist/lib/import.js +1 -1
  51. package/dist/lib/import.js.map +1 -1
  52. package/dist/lib/input.d.ts +0 -11
  53. package/dist/lib/input.d.ts.map +1 -1
  54. package/dist/lib/input.js +0 -35
  55. package/dist/lib/input.js.map +1 -1
  56. package/dist/lib/merge.d.ts.map +1 -1
  57. package/dist/lib/merge.js +9 -1
  58. package/dist/lib/merge.js.map +1 -1
  59. package/dist/lib/ooxml.d.ts +22 -0
  60. package/dist/lib/ooxml.d.ts.map +1 -1
  61. package/dist/lib/ooxml.js +130 -0
  62. package/dist/lib/ooxml.js.map +1 -1
  63. package/dist/lib/orcid.d.ts.map +1 -1
  64. package/dist/lib/orcid.js +16 -7
  65. package/dist/lib/orcid.js.map +1 -1
  66. package/dist/lib/plugins.d.ts.map +1 -1
  67. package/dist/lib/plugins.js +8 -4
  68. package/dist/lib/plugins.js.map +1 -1
  69. package/dist/lib/protect-restore.d.ts.map +1 -1
  70. package/dist/lib/protect-restore.js +7 -5
  71. package/dist/lib/protect-restore.js.map +1 -1
  72. package/dist/lib/restore-references.d.ts.map +1 -1
  73. package/dist/lib/restore-references.js +25 -3
  74. package/dist/lib/restore-references.js.map +1 -1
  75. package/dist/lib/schema.d.ts.map +1 -1
  76. package/dist/lib/schema.js +1 -19
  77. package/dist/lib/schema.js.map +1 -1
  78. package/dist/lib/slides.js +1 -1
  79. package/dist/lib/slides.js.map +1 -1
  80. package/dist/lib/spelling.js +1 -1
  81. package/dist/lib/spelling.js.map +1 -1
  82. package/dist/lib/tui.js +0 -1
  83. package/dist/lib/tui.js.map +1 -1
  84. package/dist/lib/utils.d.ts +14 -0
  85. package/dist/lib/utils.d.ts.map +1 -1
  86. package/dist/lib/utils.js +41 -0
  87. package/dist/lib/utils.js.map +1 -1
  88. package/dist/lib/word-extraction.d.ts +5 -5
  89. package/dist/lib/word-extraction.d.ts.map +1 -1
  90. package/dist/lib/word-extraction.js +25 -106
  91. package/dist/lib/word-extraction.js.map +1 -1
  92. package/dist/lib/word.d.ts +14 -38
  93. package/dist/lib/word.d.ts.map +1 -1
  94. package/dist/lib/word.js +24 -179
  95. package/dist/lib/word.js.map +1 -1
  96. package/dist/lib/wordcomments.d.ts.map +1 -1
  97. package/dist/lib/wordcomments.js +9 -7
  98. package/dist/lib/wordcomments.js.map +1 -1
  99. package/package.json +17 -6
  100. package/.gitattributes +0 -1
  101. package/PLAN-tables-and-postprocess.md +0 -850
  102. package/bin/rev.ts +0 -145
  103. package/docs-src/build.py +0 -113
  104. package/docs-src/extra.css +0 -208
  105. package/docs-src/md-to-html.lua +0 -6
  106. package/docs-src/template.html +0 -116
  107. package/eslint.config.js +0 -27
  108. package/lib/anchor-match.ts +0 -307
  109. package/lib/annotations.ts +0 -695
  110. package/lib/build.ts +0 -2047
  111. package/lib/citations.ts +0 -160
  112. package/lib/commands/build.ts +0 -885
  113. package/lib/commands/citations.ts +0 -515
  114. package/lib/commands/comments.ts +0 -1077
  115. package/lib/commands/context.ts +0 -185
  116. package/lib/commands/core.ts +0 -328
  117. package/lib/commands/doi.ts +0 -451
  118. package/lib/commands/file-ops.ts +0 -372
  119. package/lib/commands/history.ts +0 -320
  120. package/lib/commands/index.ts +0 -87
  121. package/lib/commands/init.ts +0 -259
  122. package/lib/commands/merge-resolve.ts +0 -378
  123. package/lib/commands/preview.ts +0 -178
  124. package/lib/commands/project-info.ts +0 -244
  125. package/lib/commands/quality.ts +0 -517
  126. package/lib/commands/response.ts +0 -454
  127. package/lib/commands/section-boundaries.ts +0 -82
  128. package/lib/commands/sections.ts +0 -451
  129. package/lib/commands/sync.ts +0 -689
  130. package/lib/commands/text-ops.ts +0 -449
  131. package/lib/commands/utilities.ts +0 -448
  132. package/lib/commands/verify-anchors.ts +0 -272
  133. package/lib/commands/word-tools.ts +0 -340
  134. package/lib/comment-realign.ts +0 -99
  135. package/lib/config.ts +0 -84
  136. package/lib/crossref.ts +0 -781
  137. package/lib/csl.ts +0 -191
  138. package/lib/dependencies.ts +0 -132
  139. package/lib/diff-engine.ts +0 -465
  140. package/lib/doi-cache.ts +0 -115
  141. package/lib/doi.ts +0 -879
  142. package/lib/equations.ts +0 -506
  143. package/lib/errors.ts +0 -350
  144. package/lib/format.ts +0 -541
  145. package/lib/git.ts +0 -326
  146. package/lib/grammar.ts +0 -303
  147. package/lib/image-registry.ts +0 -180
  148. package/lib/import.ts +0 -932
  149. package/lib/input.ts +0 -174
  150. package/lib/journals.ts +0 -543
  151. package/lib/macro-filter.lua +0 -201
  152. package/lib/macros.ts +0 -273
  153. package/lib/merge.ts +0 -633
  154. package/lib/ooxml.ts +0 -768
  155. package/lib/orcid.ts +0 -144
  156. package/lib/pdf-comments.ts +0 -263
  157. package/lib/pdf-import.ts +0 -524
  158. package/lib/plugins.ts +0 -362
  159. package/lib/postprocess.ts +0 -188
  160. package/lib/pptx-color-filter.lua +0 -37
  161. package/lib/pptx-template.ts +0 -469
  162. package/lib/pptx-themes/academic.pptx +0 -0
  163. package/lib/pptx-themes/corporate.pptx +0 -0
  164. package/lib/pptx-themes/dark.pptx +0 -0
  165. package/lib/pptx-themes/default.pptx +0 -0
  166. package/lib/pptx-themes/minimal.pptx +0 -0
  167. package/lib/pptx-themes/plant.pptx +0 -0
  168. package/lib/pptx-themes.ts +0 -483
  169. package/lib/protect-restore.ts +0 -520
  170. package/lib/rate-limiter.ts +0 -127
  171. package/lib/response.ts +0 -200
  172. package/lib/restore-references.ts +0 -240
  173. package/lib/review.ts +0 -327
  174. package/lib/schema.ts +0 -494
  175. package/lib/scientific-words.ts +0 -73
  176. package/lib/sections.ts +0 -428
  177. package/lib/slides.ts +0 -756
  178. package/lib/spelling.ts +0 -334
  179. package/lib/templates.ts +0 -526
  180. package/lib/themes.ts +0 -742
  181. package/lib/trackchanges.ts +0 -166
  182. package/lib/tui.ts +0 -450
  183. package/lib/types.ts +0 -546
  184. package/lib/undo.ts +0 -250
  185. package/lib/utils.ts +0 -69
  186. package/lib/variables.ts +0 -179
  187. package/lib/word-extraction.ts +0 -525
  188. package/lib/word.ts +0 -526
  189. package/lib/wordcomments.ts +0 -789
  190. package/mkdocs.yml +0 -64
  191. package/scripts/postbuild.js +0 -47
  192. package/tsconfig.json +0 -26
  193. package/types/index.d.ts +0 -531
@@ -1,307 +0,0 @@
1
- /**
2
- * Anchor matching primitives shared between sync (insertion) and
3
- * verify-anchors (drift reporting). The functions are pure: given an
4
- * anchor string and surrounding context, locate candidate positions in
5
- * a target text using progressively looser strategies.
6
- */
7
-
8
- import { stripAnnotations } from './annotations.js';
9
-
10
- export type AnchorStrategy =
11
- | 'direct'
12
- | 'normalized'
13
- | 'stripped'
14
- | 'partial-start'
15
- | 'partial-start-stripped'
16
- | 'partial-window'
17
- | 'partial-window-stripped'
18
- | 'context-both'
19
- | 'context-before'
20
- | 'context-after'
21
- | 'split-match'
22
- | 'empty-anchor'
23
- | 'failed';
24
-
25
- export interface AnchorSearchResult {
26
- occurrences: number[];
27
- matchedAnchor: string | null;
28
- strategy: AnchorStrategy;
29
- stripped?: boolean;
30
- }
31
-
32
- /**
33
- * Strip CriticMarkup so the matcher sees plain prose instead of
34
- * `{++inserted++}`/`{--deleted--}`/etc. Used when an anchor lives
35
- * underneath previously imported track changes. Delegates to the single
36
- * annotation stripper so the matcher and the build path resolve markup the
37
- * same way — a payload containing `+`, `-`, or `~` is handled correctly.
38
- */
39
- export function stripCriticMarkup(text: string): string {
40
- return stripAnnotations(text);
41
- }
42
-
43
- /**
44
- * Return every starting index where `needle` occurs in `haystack`.
45
- * Empty needles return no occurrences (empty matches are not useful
46
- * for anchor placement).
47
- */
48
- /**
49
- * Score how well the docx-side `before` / `after` context matches the
50
- * surroundings of a candidate position in the target text. Used by
51
- * `verify-anchors` to tell apart "multiple hits but context picks one
52
- * cleanly" (sync will place it correctly) from "multiple hits, context
53
- * doesn't help" (truly ambiguous, needs human placement).
54
- *
55
- * Returns 0 if no context was provided.
56
- */
57
- export function scoreContextAt(
58
- pos: number,
59
- text: string,
60
- before: string,
61
- after: string,
62
- anchorLen: number,
63
- ): number {
64
- let score = 0;
65
- if (before) {
66
- const contextBefore = text.slice(Math.max(0, pos - before.length - 20), pos).toLowerCase();
67
- const beforeLower = before.toLowerCase();
68
- const beforeWords = beforeLower.split(/\s+/).filter(w => w.length > 3);
69
- for (const word of beforeWords) {
70
- if (contextBefore.includes(word)) score += 2;
71
- }
72
- if (contextBefore.includes(beforeLower.slice(-30))) score += 5;
73
- }
74
- if (after) {
75
- const contextAfter = text.slice(pos + anchorLen, pos + anchorLen + after.length + 20).toLowerCase();
76
- const afterLower = after.toLowerCase();
77
- const afterWords = afterLower.split(/\s+/).filter(w => w.length > 3);
78
- for (const word of afterWords) {
79
- if (contextAfter.includes(word)) score += 2;
80
- }
81
- if (contextAfter.includes(afterLower.slice(0, 30))) score += 5;
82
- }
83
- return score;
84
- }
85
-
86
- export function findAllOccurrences(haystack: string, needle: string): number[] {
87
- if (!needle || needle.length === 0) return [];
88
- const occurrences: number[] = [];
89
- let idx = 0;
90
- while ((idx = haystack.indexOf(needle, idx)) !== -1) {
91
- occurrences.push(idx);
92
- idx += 1;
93
- }
94
- return occurrences;
95
- }
96
-
97
- /**
98
- * Find candidate positions for `anchor` in `text`, falling back through
99
- * progressively looser strategies (whitespace normalization, stripped
100
- * CriticMarkup, partial-prefix, surrounding context, word splitting).
101
- *
102
- * The returned `strategy` lets callers distinguish a clean direct hit
103
- * from a fuzzy approximation — useful for drift reporting.
104
- */
105
- export function findAnchorInText(
106
- anchor: string,
107
- text: string,
108
- before: string = '',
109
- after: string = ''
110
- ): AnchorSearchResult {
111
- // Empty anchor: skip directly to context-based matching
112
- if (!anchor || anchor.trim().length === 0) {
113
- if (before || after) {
114
- const beforeLower = (before || '').toLowerCase();
115
- const afterLower = (after || '').toLowerCase();
116
- const textLower = text.toLowerCase();
117
-
118
- if (before && after) {
119
- const beforeIdx = textLower.indexOf(beforeLower.slice(-50));
120
- if (beforeIdx !== -1) {
121
- const searchStart = beforeIdx + beforeLower.slice(-50).length;
122
- const afterIdx = textLower.indexOf(afterLower.slice(0, 50), searchStart);
123
- if (afterIdx !== -1 && afterIdx - searchStart < 500) {
124
- return { occurrences: [searchStart], matchedAnchor: null, strategy: 'context-both' };
125
- }
126
- }
127
- }
128
-
129
- if (before) {
130
- const beforeIdx = textLower.lastIndexOf(beforeLower.slice(-30));
131
- if (beforeIdx !== -1) {
132
- return {
133
- occurrences: [beforeIdx + beforeLower.slice(-30).length],
134
- matchedAnchor: null,
135
- strategy: 'context-before',
136
- };
137
- }
138
- }
139
-
140
- if (after) {
141
- const afterIdx = textLower.indexOf(afterLower.slice(0, 30));
142
- if (afterIdx !== -1) {
143
- return { occurrences: [afterIdx], matchedAnchor: null, strategy: 'context-after' };
144
- }
145
- }
146
- }
147
- return { occurrences: [], matchedAnchor: null, strategy: 'empty-anchor' };
148
- }
149
-
150
- const anchorLower = anchor.toLowerCase();
151
- const textLower = text.toLowerCase();
152
-
153
- // Strategy 1: direct match
154
- let occurrences = findAllOccurrences(textLower, anchorLower);
155
- if (occurrences.length > 0) {
156
- return { occurrences, matchedAnchor: anchor, strategy: 'direct' };
157
- }
158
-
159
- // Strategy 2: normalized whitespace
160
- const normalizedAnchor = anchor.replace(/\s+/g, ' ').toLowerCase();
161
- const normalizedText = text.replace(/\s+/g, ' ').toLowerCase();
162
- const idx = normalizedText.indexOf(normalizedAnchor);
163
- if (idx !== -1) {
164
- return { occurrences: [idx], matchedAnchor: anchor, strategy: 'normalized' };
165
- }
166
-
167
- // Strategy 3: match in stripped CriticMarkup version
168
- const strippedText = stripCriticMarkup(text);
169
- const strippedLower = strippedText.toLowerCase();
170
- occurrences = findAllOccurrences(strippedLower, anchorLower);
171
- if (occurrences.length > 0) {
172
- return { occurrences, matchedAnchor: anchor, strategy: 'stripped', stripped: true };
173
- }
174
-
175
- // Strategy 4: word window from anchor (prefix or interior).
176
- // Sliding the window across the anchor catches the case where the
177
- // anchor's prefix has been edited but a chunk in the middle/end
178
- // survived intact (e.g. "Sensitivity analyses were performed by
179
- // perturbing the prior variance" → drifted "Sensitivity analyses
180
- // perturbed the prior variance" still contains "the prior variance").
181
- const words = anchor.split(/\s+/);
182
- if (words.length > 3) {
183
- for (let n = Math.min(6, words.length); n >= 3; n--) {
184
- for (let start = 0; start + n <= words.length; start++) {
185
- const window = words.slice(start, start + n).join(' ');
186
- const windowLower = window.toLowerCase();
187
- if (windowLower.length < 15) continue;
188
-
189
- let occ = findAllOccurrences(textLower, windowLower);
190
- if (occ.length > 0) {
191
- const strategy: AnchorStrategy = start === 0 ? 'partial-start' : 'partial-window';
192
- return { occurrences: occ, matchedAnchor: window, strategy };
193
- }
194
- occ = findAllOccurrences(strippedLower, windowLower);
195
- if (occ.length > 0) {
196
- const strategy: AnchorStrategy = start === 0 ? 'partial-start-stripped' : 'partial-window-stripped';
197
- return { occurrences: occ, matchedAnchor: window, strategy, stripped: true };
198
- }
199
- }
200
- }
201
- }
202
-
203
- // Strategy 5: context (before/after) only.
204
- //
205
- // For a non-empty anchor that already failed every text-based strategy
206
- // above, we treat context as a degraded placement: classify it
207
- // 'context-only' so callers can warn the user. We also reject
208
- // implausible brackets — if both contexts match but the gap between
209
- // them is far too small to contain the anchor (e.g. the anchored
210
- // sentence was deleted), do not silently land the comment between
211
- // the surviving sentences. Return 'failed' so the user is told to
212
- // place it manually.
213
- if (before || after) {
214
- const beforeLower = before.toLowerCase();
215
- const afterLower = after.toLowerCase();
216
- const anchorLen = anchor.length;
217
-
218
- if (before && after) {
219
- const beforeIdx = textLower.indexOf(beforeLower.slice(-50));
220
- if (beforeIdx !== -1) {
221
- const searchStart = beforeIdx + beforeLower.slice(-50).length;
222
- const afterIdx = textLower.indexOf(afterLower.slice(0, 50), searchStart);
223
- if (afterIdx !== -1) {
224
- const gap = afterIdx - searchStart;
225
- // Require the bracket to plausibly contain a remnant of the anchor.
226
- // Below 30% of anchor length: anchor was deleted — refuse to place.
227
- // Above 2× anchor length + slack: brackets are too far apart, the
228
- // matcher has latched onto unrelated repeats of common context.
229
- const minGap = Math.floor(anchorLen * 0.3);
230
- const maxGap = Math.min(500, anchorLen * 2 + 50);
231
- if (gap >= minGap && gap <= maxGap) {
232
- return { occurrences: [searchStart], matchedAnchor: null, strategy: 'context-both' };
233
- }
234
- // Both brackets found but gap implausible: anchor likely deleted.
235
- // Don't fall back to single-side context — that would silently
236
- // place the comment in the wrong location.
237
- return { occurrences: [], matchedAnchor: null, strategy: 'failed' };
238
- }
239
- }
240
- }
241
-
242
- if (before) {
243
- const beforeIdx = textLower.lastIndexOf(beforeLower.slice(-30));
244
- if (beforeIdx !== -1) {
245
- return {
246
- occurrences: [beforeIdx + beforeLower.slice(-30).length],
247
- matchedAnchor: null,
248
- strategy: 'context-before',
249
- };
250
- }
251
- }
252
-
253
- if (after) {
254
- const afterIdx = textLower.indexOf(afterLower.slice(0, 30));
255
- if (afterIdx !== -1) {
256
- return { occurrences: [afterIdx], matchedAnchor: null, strategy: 'context-after' };
257
- }
258
- }
259
- }
260
-
261
- // Strategy 6: split anchor on transition characters
262
- const splitPatterns = [' ', ', ', '. ', ' - ', ' – '];
263
- for (const sep of splitPatterns) {
264
- if (anchor.includes(sep)) {
265
- const parts = anchor.split(sep).filter(p => p.length >= 4);
266
- for (const part of parts) {
267
- const partLower = part.toLowerCase();
268
- occurrences = findAllOccurrences(textLower, partLower);
269
- if (occurrences.length > 0 && occurrences.length < 5) {
270
- return { occurrences, matchedAnchor: part, strategy: 'split-match' };
271
- }
272
- }
273
- }
274
- }
275
-
276
- return { occurrences: [], matchedAnchor: null, strategy: 'failed' };
277
- }
278
-
279
- /**
280
- * Classify a strategy as a clean hit, a fuzzy/drifted hit, or no hit.
281
- * Used by `verify-anchors` to summarize per-comment match quality.
282
- */
283
- export type AnchorMatchQuality = 'clean' | 'drift' | 'context-only' | 'unmatched';
284
-
285
- export function classifyStrategy(strategy: AnchorStrategy, occurrences: number): AnchorMatchQuality {
286
- if (occurrences === 0) return 'unmatched';
287
- switch (strategy) {
288
- case 'direct':
289
- case 'normalized':
290
- return 'clean';
291
- case 'stripped':
292
- case 'partial-start':
293
- case 'partial-start-stripped':
294
- case 'partial-window':
295
- case 'partial-window-stripped':
296
- case 'split-match':
297
- return 'drift';
298
- case 'context-both':
299
- case 'context-before':
300
- case 'context-after':
301
- return 'context-only';
302
- case 'empty-anchor':
303
- case 'failed':
304
- default:
305
- return 'unmatched';
306
- }
307
- }