docrev 0.11.1 → 0.11.3

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (144) hide show
  1. package/.gitattributes +1 -1
  2. package/CHANGELOG.md +207 -197
  3. package/PLAN-tables-and-postprocess.md +850 -850
  4. package/README.md +433 -433
  5. package/bin/rev.js +11 -11
  6. package/bin/rev.ts +145 -145
  7. package/completions/rev.bash +127 -127
  8. package/completions/rev.ps1 +210 -210
  9. package/completions/rev.zsh +207 -207
  10. package/dist/lib/annotations.d.ts.map +1 -1
  11. package/dist/lib/annotations.js +28 -0
  12. package/dist/lib/annotations.js.map +1 -1
  13. package/dist/lib/build.d.ts +28 -0
  14. package/dist/lib/build.d.ts.map +1 -1
  15. package/dist/lib/build.js +81 -4
  16. package/dist/lib/build.js.map +1 -1
  17. package/dist/lib/commands/comments.d.ts.map +1 -1
  18. package/dist/lib/commands/comments.js +58 -28
  19. package/dist/lib/commands/comments.js.map +1 -1
  20. package/dist/lib/commands/context.d.ts +1 -0
  21. package/dist/lib/commands/context.d.ts.map +1 -1
  22. package/dist/lib/commands/context.js +1 -0
  23. package/dist/lib/commands/context.js.map +1 -1
  24. package/dist/lib/commands/core.d.ts.map +1 -1
  25. package/dist/lib/commands/core.js +25 -8
  26. package/dist/lib/commands/core.js.map +1 -1
  27. package/dist/lib/commands/response.js +1 -1
  28. package/dist/lib/commands/response.js.map +1 -1
  29. package/dist/lib/commands/utilities.js +164 -164
  30. package/dist/lib/commands/word-tools.js +8 -8
  31. package/dist/lib/grammar.js +3 -3
  32. package/dist/lib/import.d.ts +14 -0
  33. package/dist/lib/import.d.ts.map +1 -1
  34. package/dist/lib/import.js +23 -0
  35. package/dist/lib/import.js.map +1 -1
  36. package/dist/lib/input.d.ts +67 -0
  37. package/dist/lib/input.d.ts.map +1 -0
  38. package/dist/lib/input.js +164 -0
  39. package/dist/lib/input.js.map +1 -0
  40. package/dist/lib/macro-filter.lua +201 -201
  41. package/dist/lib/pdf-comments.js +44 -44
  42. package/dist/lib/plugins.js +57 -57
  43. package/dist/lib/pptx-color-filter.lua +37 -37
  44. package/dist/lib/pptx-themes.js +115 -115
  45. package/dist/lib/response.d.ts +1 -1
  46. package/dist/lib/response.d.ts.map +1 -1
  47. package/dist/lib/response.js +5 -2
  48. package/dist/lib/response.js.map +1 -1
  49. package/dist/lib/schema.d.ts.map +1 -1
  50. package/dist/lib/schema.js +8 -2
  51. package/dist/lib/schema.js.map +1 -1
  52. package/dist/lib/spelling.js +2 -2
  53. package/dist/lib/templates.js +387 -387
  54. package/dist/lib/themes.js +51 -51
  55. package/eslint.config.js +27 -27
  56. package/lib/anchor-match.ts +307 -307
  57. package/lib/annotations.ts +695 -664
  58. package/lib/build.ts +2047 -1956
  59. package/lib/citations.ts +160 -160
  60. package/lib/commands/build.ts +885 -885
  61. package/lib/commands/citations.ts +515 -515
  62. package/lib/commands/comments.ts +1077 -1050
  63. package/lib/commands/context.ts +185 -176
  64. package/lib/commands/core.ts +328 -309
  65. package/lib/commands/doi.ts +451 -451
  66. package/lib/commands/file-ops.ts +372 -372
  67. package/lib/commands/history.ts +320 -320
  68. package/lib/commands/index.ts +87 -87
  69. package/lib/commands/init.ts +259 -259
  70. package/lib/commands/merge-resolve.ts +378 -378
  71. package/lib/commands/preview.ts +178 -178
  72. package/lib/commands/project-info.ts +244 -244
  73. package/lib/commands/quality.ts +517 -517
  74. package/lib/commands/response.ts +454 -454
  75. package/lib/commands/section-boundaries.ts +82 -82
  76. package/lib/commands/sections.ts +451 -451
  77. package/lib/commands/sync.ts +689 -689
  78. package/lib/commands/text-ops.ts +449 -449
  79. package/lib/commands/utilities.ts +448 -448
  80. package/lib/commands/verify-anchors.ts +272 -272
  81. package/lib/commands/word-tools.ts +340 -340
  82. package/lib/comment-realign.ts +99 -99
  83. package/lib/config.ts +84 -84
  84. package/lib/crossref.ts +781 -781
  85. package/lib/csl.ts +191 -191
  86. package/lib/dependencies.ts +132 -132
  87. package/lib/diff-engine.ts +465 -465
  88. package/lib/doi-cache.ts +115 -115
  89. package/lib/doi.ts +879 -879
  90. package/lib/equations.ts +506 -506
  91. package/lib/errors.ts +350 -350
  92. package/lib/format.ts +541 -541
  93. package/lib/git.ts +326 -326
  94. package/lib/grammar.ts +303 -303
  95. package/lib/image-registry.ts +180 -180
  96. package/lib/import.ts +932 -906
  97. package/lib/input.ts +174 -0
  98. package/lib/journals.ts +543 -543
  99. package/lib/macro-filter.lua +201 -201
  100. package/lib/macros.ts +273 -273
  101. package/lib/merge.ts +633 -633
  102. package/lib/ooxml.ts +768 -768
  103. package/lib/orcid.ts +144 -144
  104. package/lib/pdf-comments.ts +263 -263
  105. package/lib/pdf-import.ts +524 -524
  106. package/lib/plugins.ts +362 -362
  107. package/lib/postprocess.ts +188 -188
  108. package/lib/pptx-color-filter.lua +37 -37
  109. package/lib/pptx-template.ts +469 -469
  110. package/lib/pptx-themes.ts +483 -483
  111. package/lib/protect-restore.ts +520 -520
  112. package/lib/rate-limiter.ts +127 -127
  113. package/lib/response.ts +200 -197
  114. package/lib/restore-references.ts +240 -240
  115. package/lib/review.ts +327 -327
  116. package/lib/schema.ts +494 -488
  117. package/lib/scientific-words.ts +73 -73
  118. package/lib/sections.ts +428 -428
  119. package/lib/slides.ts +756 -756
  120. package/lib/spelling.ts +334 -334
  121. package/lib/templates.ts +526 -526
  122. package/lib/themes.ts +742 -742
  123. package/lib/trackchanges.ts +166 -166
  124. package/lib/tui.ts +450 -450
  125. package/lib/types.ts +546 -546
  126. package/lib/undo.ts +250 -250
  127. package/lib/utils.ts +69 -69
  128. package/lib/variables.ts +179 -179
  129. package/lib/word-extraction.ts +525 -525
  130. package/lib/word.ts +526 -526
  131. package/lib/wordcomments.ts +789 -789
  132. package/package.json +1 -1
  133. package/scripts/postbuild.js +47 -47
  134. package/skill/REFERENCE.md +550 -550
  135. package/skill/SKILL.md +302 -302
  136. package/tsconfig.json +26 -26
  137. package/types/index.d.ts +531 -531
  138. package/issues.md +0 -180
  139. package/site/assets/extra.css +0 -208
  140. package/site/commands.html +0 -926
  141. package/site/configuration.html +0 -469
  142. package/site/index.html +0 -288
  143. package/site/troubleshooting.html +0 -461
  144. package/site/workflow.html +0 -518
package/site/configuration.html DELETED
@@ -1,469 +0,0 @@
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- <!DOCTYPE html>
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- <html lang="en" data-bs-theme="light">
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- <head>
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- <meta charset="utf-8">
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- <meta name="viewport" content="width=device-width, initial-scale=1">
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- <title>Configuration — docrev</title>
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- <meta name="description" content="CLI for writing documents in Markdown while collaborating with Word users.">
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- <link rel="stylesheet" href="https://cdn.jsdelivr.net/npm/bootswatch@5.3.3/dist/sandstone/bootstrap.min.css">
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- <style>
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- -khtml-user-select: none; -moz-user-select: none;
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- -ms-user-select: none; user-select: none;
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- </style>
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- <link rel="stylesheet" href="assets/extra.css">
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- </head>
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- <body>
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-
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- <nav class="navbar navbar-expand-lg fixed-top" aria-label="Site navigation">
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- <div class="container">
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- <a class="navbar-brand me-2" href="index.html">docrev</a>
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- <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar-main" aria-controls="navbar-main" aria-expanded="false" aria-label="Toggle navigation">
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- <span class="navbar-toggler-icon"></span>
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- </button>
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- <div class="collapse navbar-collapse" id="navbar-main">
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- <ul class="navbar-nav me-auto">
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- <li class="nav-item">
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- <a class="nav-link" href="index.html">Home</a>
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- </li>
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- <li class="nav-item">
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- <a class="nav-link" href="workflow.html">Get Started</a>
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- </li>
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- <li class="nav-item">
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- <a class="nav-link" href="commands.html">Commands</a>
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- </li>
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- <li class="nav-item">
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- <a class="nav-link active" aria-current="page" href="configuration.html">Configuration</a>
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- </li>
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- <li class="nav-item">
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- <a class="nav-link" href="troubleshooting.html">Troubleshooting</a>
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- </li>
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- </ul>
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- <ul class="navbar-nav">
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- <li class="nav-item">
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- <button id="theme-toggle" class="btn btn-link nav-link border-0" aria-label="Toggle dark mode">
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- <a class="nav-link" href="https://github.com/gcol33/docrev" aria-label="GitHub">
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- </nav>
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-
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- <div class="container template-article">
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- <div class="row">
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- <main id="main" class="col-md-9">
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- <h1 id="configuration">Configuration</h1>
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- <h2 id="rev.yaml">rev.yaml</h2>
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- <p>The project configuration file.</p>
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- <div class="sourceCode" id="cb1"><pre
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- class="sourceCode yaml"><code class="sourceCode yaml"><span id="cb1-1"><a href="#cb1-1" aria-hidden="true" tabindex="-1"></a><span class="fu">title</span><span class="kw">:</span><span class="at"> </span><span class="st">&quot;Your Paper Title&quot;</span></span>
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- <span id="cb1-2"><a href="#cb1-2" aria-hidden="true" tabindex="-1"></a><span class="fu">version</span><span class="kw">:</span><span class="at"> </span><span class="st">&quot;1.0&quot;</span></span>
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- <span id="cb1-3"><a href="#cb1-3" aria-hidden="true" tabindex="-1"></a></span>
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- <span id="cb1-4"><a href="#cb1-4" aria-hidden="true" tabindex="-1"></a><span class="fu">authors</span><span class="kw">:</span></span>
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- <span id="cb1-5"><a href="#cb1-5" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="kw">-</span><span class="at"> </span><span class="fu">name</span><span class="kw">:</span><span class="at"> First Author</span></span>
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- <span id="cb1-6"><a href="#cb1-6" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">affiliation</span><span class="kw">:</span><span class="at"> Institution</span></span>
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- <span id="cb1-7"><a href="#cb1-7" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">email</span><span class="kw">:</span><span class="at"> author@example.com</span></span>
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- <span id="cb1-8"><a href="#cb1-8" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="kw">-</span><span class="at"> </span><span class="fu">name</span><span class="kw">:</span><span class="at"> Second Author</span></span>
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- <span id="cb1-9"><a href="#cb1-9" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">affiliation</span><span class="kw">:</span><span class="at"> Another Institution</span></span>
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- <span id="cb1-10"><a href="#cb1-10" aria-hidden="true" tabindex="-1"></a></span>
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- <span id="cb1-11"><a href="#cb1-11" aria-hidden="true" tabindex="-1"></a><span class="fu">sections</span><span class="kw">:</span></span>
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- <span id="cb1-12"><a href="#cb1-12" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="kw">-</span><span class="at"> introduction.md</span></span>
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- <span id="cb1-13"><a href="#cb1-13" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="kw">-</span><span class="at"> methods.md</span></span>
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- <span id="cb1-14"><a href="#cb1-14" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="kw">-</span><span class="at"> results.md</span></span>
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- <span id="cb1-15"><a href="#cb1-15" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="kw">-</span><span class="at"> discussion.md</span></span>
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- <span id="cb1-16"><a href="#cb1-16" aria-hidden="true" tabindex="-1"></a></span>
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- <span id="cb1-17"><a href="#cb1-17" aria-hidden="true" tabindex="-1"></a><span class="fu">bibliography</span><span class="kw">:</span><span class="at"> references.bib</span></span>
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- <span id="cb1-18"><a href="#cb1-18" aria-hidden="true" tabindex="-1"></a><span class="fu">csl</span><span class="kw">:</span><span class="at"> nature.csl</span><span class="co"> # Citation style (optional)</span></span>
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- <span id="cb1-19"><a href="#cb1-19" aria-hidden="true" tabindex="-1"></a></span>
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- <span id="cb1-20"><a href="#cb1-20" aria-hidden="true" tabindex="-1"></a><span class="co"># Cross-reference settings (pandoc-crossref)</span></span>
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- <span id="cb1-21"><a href="#cb1-21" aria-hidden="true" tabindex="-1"></a><span class="fu">crossref</span><span class="kw">:</span></span>
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- <span id="cb1-22"><a href="#cb1-22" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">figureTitle</span><span class="kw">:</span><span class="at"> Figure</span></span>
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- <span id="cb1-23"><a href="#cb1-23" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">tableTitle</span><span class="kw">:</span><span class="at"> Table</span></span>
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- <span id="cb1-24"><a href="#cb1-24" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">figPrefix</span><span class="kw">:</span><span class="at"> </span><span class="kw">[</span><span class="at">Fig.</span><span class="kw">,</span><span class="at"> Figs.</span><span class="kw">]</span></span>
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- <span id="cb1-25"><a href="#cb1-25" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">tblPrefix</span><span class="kw">:</span><span class="at"> </span><span class="kw">[</span><span class="at">Table</span><span class="kw">,</span><span class="at"> Tables</span><span class="kw">]</span></span>
165
- <span id="cb1-26"><a href="#cb1-26" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">eqnPrefix</span><span class="kw">:</span><span class="at"> </span><span class="kw">[</span><span class="at">Eq.</span><span class="kw">,</span><span class="at"> Eqs.</span><span class="kw">]</span></span>
166
- <span id="cb1-27"><a href="#cb1-27" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">secPrefix</span><span class="kw">:</span><span class="at"> </span><span class="kw">[</span><span class="at">Section</span><span class="kw">,</span><span class="at"> Sections</span><span class="kw">]</span></span>
167
- <span id="cb1-28"><a href="#cb1-28" aria-hidden="true" tabindex="-1"></a></span>
168
- <span id="cb1-29"><a href="#cb1-29" aria-hidden="true" tabindex="-1"></a><span class="co"># PDF output settings</span></span>
169
- <span id="cb1-30"><a href="#cb1-30" aria-hidden="true" tabindex="-1"></a><span class="fu">pdf</span><span class="kw">:</span></span>
170
- <span id="cb1-31"><a href="#cb1-31" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">documentclass</span><span class="kw">:</span><span class="at"> article</span></span>
171
- <span id="cb1-32"><a href="#cb1-32" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">fontsize</span><span class="kw">:</span><span class="at"> 12pt</span></span>
172
- <span id="cb1-33"><a href="#cb1-33" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">geometry</span><span class="kw">:</span><span class="at"> margin=1in</span></span>
173
- <span id="cb1-34"><a href="#cb1-34" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">linestretch</span><span class="kw">:</span><span class="at"> </span><span class="fl">1.5</span></span>
174
- <span id="cb1-35"><a href="#cb1-35" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">toc</span><span class="kw">:</span><span class="at"> </span><span class="ch">false</span></span>
175
- <span id="cb1-36"><a href="#cb1-36" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">numbersections</span><span class="kw">:</span><span class="at"> </span><span class="ch">true</span></span>
176
- <span id="cb1-37"><a href="#cb1-37" aria-hidden="true" tabindex="-1"></a></span>
177
- <span id="cb1-38"><a href="#cb1-38" aria-hidden="true" tabindex="-1"></a><span class="co"># Word output settings</span></span>
178
- <span id="cb1-39"><a href="#cb1-39" aria-hidden="true" tabindex="-1"></a><span class="fu">docx</span><span class="kw">:</span></span>
179
- <span id="cb1-40"><a href="#cb1-40" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">reference</span><span class="kw">:</span><span class="at"> template.docx</span><span class="co"> # Optional reference doc for styling</span></span>
180
- <span id="cb1-41"><a href="#cb1-41" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">keepComments</span><span class="kw">:</span><span class="at"> </span><span class="ch">true</span><span class="co"> # Preserve CriticMarkup comments</span></span>
181
- <span id="cb1-42"><a href="#cb1-42" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">toc</span><span class="kw">:</span><span class="at"> </span><span class="ch">false</span></span></code></pre></div>
182
- <h2 id="template-variables">Template Variables</h2>
183
- <p>Use in section files (processed during build):</p>
184
- <table>
185
- <thead>
186
- <tr>
187
- <th>Variable</th>
188
- <th>Description</th>
189
- <th>Example Output</th>
190
- </tr>
191
- </thead>
192
- <tbody>
193
- <tr>
194
- <td><code>{{date}}</code></td>
195
- <td>Current date</td>
196
- <td>2025-12-30</td>
197
- </tr>
198
- <tr>
199
- <td><code>{{date:MMMM D, YYYY}}</code></td>
200
- <td>Custom format</td>
201
- <td>December 30, 2025</td>
202
- </tr>
203
- <tr>
204
- <td><code>{{year}}</code></td>
205
- <td>Current year</td>
206
- <td>2025</td>
207
- </tr>
208
- <tr>
209
- <td><code>{{version}}</code></td>
210
- <td>From rev.yaml</td>
211
- <td>1.0</td>
212
- </tr>
213
- <tr>
214
- <td><code>{{title}}</code></td>
215
- <td>Document title</td>
216
- <td>Your Paper Title</td>
217
- </tr>
218
- <tr>
219
- <td><code>{{author}}</code></td>
220
- <td>First author</td>
221
- <td>First Author</td>
222
- </tr>
223
- <tr>
224
- <td><code>{{authors}}</code></td>
225
- <td>All authors</td>
226
- <td>First Author, Second Author</td>
227
- </tr>
228
- <tr>
229
- <td><code>{{word_count}}</code></td>
230
- <td>Total words</td>
231
- <td>5,432</td>
232
- </tr>
233
- </tbody>
234
- </table>
235
- <p><strong>Example usage:</strong></p>
236
- <div class="sourceCode" id="cb2"><pre
237
- class="sourceCode markdown"><code class="sourceCode markdown"><span id="cb2-1"><a href="#cb2-1" aria-hidden="true" tabindex="-1"></a><span class="fu"># Methods</span></span>
238
- <span id="cb2-2"><a href="#cb2-2" aria-hidden="true" tabindex="-1"></a></span>
239
- <span id="cb2-3"><a href="#cb2-3" aria-hidden="true" tabindex="-1"></a>Last updated: {{date:MMMM D, YYYY}}</span>
240
- <span id="cb2-4"><a href="#cb2-4" aria-hidden="true" tabindex="-1"></a></span>
241
- <span id="cb2-5"><a href="#cb2-5" aria-hidden="true" tabindex="-1"></a>Word count: {{word_count}}</span></code></pre></div>
242
- <h2 id="user-configuration">User Configuration</h2>
243
- <p>Set your name for comment replies:</p>
244
- <div class="sourceCode" id="cb3"><pre
245
- class="sourceCode bash"><code class="sourceCode bash"><span id="cb3-1"><a href="#cb3-1" aria-hidden="true" tabindex="-1"></a><span class="fu">rev</span> config user <span class="st">&quot;Your Name&quot;</span></span></code></pre></div>
246
- <p>Set default sections for new projects:</p>
247
- <div class="sourceCode" id="cb4"><pre
248
- class="sourceCode bash"><code class="sourceCode bash"><span id="cb4-1"><a href="#cb4-1" aria-hidden="true" tabindex="-1"></a><span class="fu">rev</span> config sections <span class="st">&quot;intro,methods,results,discussion&quot;</span></span></code></pre></div>
249
- <p>This creates <code>~/.revrc</code>:</p>
250
- <div class="sourceCode" id="cb5"><pre
251
- class="sourceCode json"><code class="sourceCode json"><span id="cb5-1"><a href="#cb5-1" aria-hidden="true" tabindex="-1"></a><span class="fu">{</span></span>
252
- <span id="cb5-2"><a href="#cb5-2" aria-hidden="true" tabindex="-1"></a> <span class="dt">&quot;userName&quot;</span><span class="fu">:</span> <span class="st">&quot;Your Name&quot;</span><span class="fu">,</span></span>
253
- <span id="cb5-3"><a href="#cb5-3" aria-hidden="true" tabindex="-1"></a> <span class="dt">&quot;defaultSections&quot;</span><span class="fu">:</span> <span class="ot">[</span><span class="st">&quot;intro&quot;</span><span class="ot">,</span> <span class="st">&quot;methods&quot;</span><span class="ot">,</span> <span class="st">&quot;results&quot;</span><span class="ot">,</span> <span class="st">&quot;discussion&quot;</span><span class="ot">]</span></span>
254
- <span id="cb5-4"><a href="#cb5-4" aria-hidden="true" tabindex="-1"></a><span class="fu">}</span></span></code></pre></div>
255
- <p>When <code>defaultSections</code> is set, <code>rev new</code>
256
- uses these sections automatically. When not set,
257
- <code>rev new</code> prompts for sections interactively.</p>
258
- <h2 id="dictionaries">Dictionaries</h2>
259
- <p><strong>Global dictionary</strong>
260
- (<code>~/.rev-dictionary</code>):</p>
261
- <div class="sourceCode" id="cb6"><pre
262
- class="sourceCode bash"><code class="sourceCode bash"><span id="cb6-1"><a href="#cb6-1" aria-hidden="true" tabindex="-1"></a><span class="fu">rev</span> spelling <span class="at">--learn</span> myword <span class="co"># Add word</span></span>
263
- <span id="cb6-2"><a href="#cb6-2" aria-hidden="true" tabindex="-1"></a><span class="fu">rev</span> spelling <span class="at">--forget</span> myword <span class="co"># Remove word</span></span>
264
- <span id="cb6-3"><a href="#cb6-3" aria-hidden="true" tabindex="-1"></a><span class="fu">rev</span> spelling <span class="at">--list</span> <span class="co"># Show dictionary</span></span></code></pre></div>
265
- <p><strong>Project dictionary</strong>
266
- (<code>.rev-dictionary</code> in project root):</p>
267
- <div class="sourceCode" id="cb7"><pre
268
- class="sourceCode bash"><code class="sourceCode bash"><span id="cb7-1"><a href="#cb7-1" aria-hidden="true" tabindex="-1"></a><span class="fu">rev</span> spelling <span class="at">--learn-project</span> myterm</span></code></pre></div>
269
- <p><strong>Grammar dictionary</strong> (same locations):</p>
270
- <div class="sourceCode" id="cb8"><pre
271
- class="sourceCode bash"><code class="sourceCode bash"><span id="cb8-1"><a href="#cb8-1" aria-hidden="true" tabindex="-1"></a><span class="fu">rev</span> grammar <span class="at">--learn</span> acronym</span>
272
- <span id="cb8-2"><a href="#cb8-2" aria-hidden="true" tabindex="-1"></a><span class="fu">rev</span> grammar <span class="at">--forget</span> acronym</span></code></pre></div>
273
- <h2 id="journal-profiles">Journal Profiles</h2>
274
- <p>21 built-in journal profiles for validation. Six also provide
275
- <strong>build formatting defaults</strong> (CSL citation style,
276
- PDF settings):</p>
277
- <div class="sourceCode" id="cb9"><pre
278
- class="sourceCode bash"><code class="sourceCode bash"><span id="cb9-1"><a href="#cb9-1" aria-hidden="true" tabindex="-1"></a><span class="fu">rev</span> validate <span class="at">--list</span> <span class="co"># List all profiles ([formatting] = build support)</span></span>
279
- <span id="cb9-2"><a href="#cb9-2" aria-hidden="true" tabindex="-1"></a><span class="fu">rev</span> validate <span class="at">-j</span> nature <span class="co"># Check against Nature requirements</span></span>
280
- <span id="cb9-3"><a href="#cb9-3" aria-hidden="true" tabindex="-1"></a><span class="fu">rev</span> word-count <span class="at">-j</span> ecology-letters <span class="co"># Use journal word limit</span></span></code></pre></div>
281
- <p>Profiles include: nature, science, pnas, elife, cell, plos-one,
282
- ecology-letters, global-change-biology, etc.</p>
283
- <h3 id="setting-a-journal">Setting a Journal</h3>
284
- <p>In <code>rev.yaml</code>:</p>
285
- <div class="sourceCode" id="cb10"><pre
286
- class="sourceCode yaml"><code class="sourceCode yaml"><span id="cb10-1"><a href="#cb10-1" aria-hidden="true" tabindex="-1"></a><span class="fu">journal</span><span class="kw">:</span><span class="at"> nature</span></span></code></pre></div>
287
- <p>Or via CLI flag (overrides rev.yaml):</p>
288
- <div class="sourceCode" id="cb11"><pre
289
- class="sourceCode bash"><code class="sourceCode bash"><span id="cb11-1"><a href="#cb11-1" aria-hidden="true" tabindex="-1"></a><span class="fu">rev</span> build pdf docx <span class="at">-j</span> nature</span></code></pre></div>
290
- <h3 id="config-cascade">Config Cascade</h3>
291
- <p>When a journal with formatting is set, settings are applied in
292
- three layers:</p>
293
- <ol type="1">
294
- <li><strong>Defaults</strong> — docrev built-in defaults (12pt,
295
- margin=1in, linestretch=1.5, etc.)</li>
296
- <li><strong>Journal formatting</strong> — from the journal profile
297
- (e.g., Nature uses 11pt, 2.5cm margins, double spacing)</li>
298
- <li><strong>Your rev.yaml</strong> — explicit settings always
299
- win</li>
300
- </ol>
301
- <p>This means you can set <code>journal: nature</code> and still
302
- override individual settings:</p>
303
- <div class="sourceCode" id="cb12"><pre
304
- class="sourceCode yaml"><code class="sourceCode yaml"><span id="cb12-1"><a href="#cb12-1" aria-hidden="true" tabindex="-1"></a><span class="fu">journal</span><span class="kw">:</span><span class="at"> nature</span></span>
305
- <span id="cb12-2"><a href="#cb12-2" aria-hidden="true" tabindex="-1"></a><span class="fu">pdf</span><span class="kw">:</span></span>
306
- <span id="cb12-3"><a href="#cb12-3" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">linestretch</span><span class="kw">:</span><span class="at"> </span><span class="fl">1.5</span><span class="co"> # override Nature&#39;s double spacing</span></span></code></pre></div>
307
- <h3 id="csl-citation-styles">CSL Citation Styles</h3>
308
- <p>Journal profiles specify a CSL style name. docrev resolves CSL
309
- files in this order:</p>
310
- <ol type="1">
311
- <li>File path in project directory (e.g.,
312
- <code>nature.csl</code>)</li>
313
- <li>Cached file in <code>~/.rev/csl/</code></li>
314
- <li>Bare name passed to pandoc –citeproc (works for some built-in
315
- styles)</li>
316
- </ol>
317
- <p>Download and cache a style:</p>
318
- <div class="sourceCode" id="cb13"><pre
319
- class="sourceCode bash"><code class="sourceCode bash"><span id="cb13-1"><a href="#cb13-1" aria-hidden="true" tabindex="-1"></a><span class="fu">rev</span> profiles <span class="at">--fetch-csl</span> nature <span class="co"># downloads to ~/.rev/csl/nature.csl</span></span>
320
- <span id="cb13-2"><a href="#cb13-2" aria-hidden="true" tabindex="-1"></a><span class="fu">rev</span> profiles <span class="at">--fetch-csl</span> apa <span class="co"># works with short names</span></span>
321
- <span id="cb13-3"><a href="#cb13-3" aria-hidden="true" tabindex="-1"></a><span class="fu">rev</span> profiles <span class="at">--list-csl</span> <span class="co"># list cached files</span></span></code></pre></div>
322
- <p>Known short names: apa, chicago, vancouver, ieee, nature,
323
- science, cell, pnas, plos, elife, ecology-letters, ama, acs,
324
- harvard, mla, elsevier, springer, biomed-central.</p>
325
- <h3 id="custom-profiles-with-formatting">Custom Profiles with
326
- Formatting</h3>
327
- <p>Custom profiles (YAML files in <code>~/.rev/profiles/</code> or
328
- <code>.rev/profiles/</code>) can include a <code>formatting</code>
329
- section:</p>
330
- <div class="sourceCode" id="cb14"><pre
331
- class="sourceCode yaml"><code class="sourceCode yaml"><span id="cb14-1"><a href="#cb14-1" aria-hidden="true" tabindex="-1"></a><span class="fu">id</span><span class="kw">:</span><span class="at"> my-journal</span></span>
332
- <span id="cb14-2"><a href="#cb14-2" aria-hidden="true" tabindex="-1"></a><span class="fu">name</span><span class="kw">:</span><span class="at"> </span><span class="st">&quot;My Journal&quot;</span></span>
333
- <span id="cb14-3"><a href="#cb14-3" aria-hidden="true" tabindex="-1"></a><span class="fu">url</span><span class="kw">:</span><span class="at"> </span><span class="st">&quot;https://journal.example.com/guidelines&quot;</span></span>
334
- <span id="cb14-4"><a href="#cb14-4" aria-hidden="true" tabindex="-1"></a></span>
335
- <span id="cb14-5"><a href="#cb14-5" aria-hidden="true" tabindex="-1"></a><span class="co"># Validation requirements</span></span>
336
- <span id="cb14-6"><a href="#cb14-6" aria-hidden="true" tabindex="-1"></a><span class="fu">wordLimit</span><span class="kw">:</span></span>
337
- <span id="cb14-7"><a href="#cb14-7" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">main</span><span class="kw">:</span><span class="at"> </span><span class="dv">6000</span></span>
338
- <span id="cb14-8"><a href="#cb14-8" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">abstract</span><span class="kw">:</span><span class="at"> </span><span class="dv">250</span></span>
339
- <span id="cb14-9"><a href="#cb14-9" aria-hidden="true" tabindex="-1"></a><span class="fu">references</span><span class="kw">:</span></span>
340
- <span id="cb14-10"><a href="#cb14-10" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">max</span><span class="kw">:</span><span class="at"> </span><span class="dv">50</span></span>
341
- <span id="cb14-11"><a href="#cb14-11" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">doiRequired</span><span class="kw">:</span><span class="at"> </span><span class="ch">true</span></span>
342
- <span id="cb14-12"><a href="#cb14-12" aria-hidden="true" tabindex="-1"></a><span class="fu">sections</span><span class="kw">:</span></span>
343
- <span id="cb14-13"><a href="#cb14-13" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">required</span><span class="kw">:</span></span>
344
- <span id="cb14-14"><a href="#cb14-14" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="kw">-</span><span class="at"> Abstract</span></span>
345
- <span id="cb14-15"><a href="#cb14-15" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="kw">-</span><span class="at"> Introduction</span></span>
346
- <span id="cb14-16"><a href="#cb14-16" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="kw">-</span><span class="at"> Methods</span></span>
347
- <span id="cb14-17"><a href="#cb14-17" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="kw">-</span><span class="at"> Results</span></span>
348
- <span id="cb14-18"><a href="#cb14-18" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="kw">-</span><span class="at"> Discussion</span></span>
349
- <span id="cb14-19"><a href="#cb14-19" aria-hidden="true" tabindex="-1"></a></span>
350
- <span id="cb14-20"><a href="#cb14-20" aria-hidden="true" tabindex="-1"></a><span class="co"># Build formatting defaults</span></span>
351
- <span id="cb14-21"><a href="#cb14-21" aria-hidden="true" tabindex="-1"></a><span class="fu">formatting</span><span class="kw">:</span></span>
352
- <span id="cb14-22"><a href="#cb14-22" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">csl</span><span class="kw">:</span><span class="at"> </span><span class="st">&quot;vancouver&quot;</span></span>
353
- <span id="cb14-23"><a href="#cb14-23" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">pdf</span><span class="kw">:</span></span>
354
- <span id="cb14-24"><a href="#cb14-24" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">fontsize</span><span class="kw">:</span><span class="at"> 11pt</span></span>
355
- <span id="cb14-25"><a href="#cb14-25" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">geometry</span><span class="kw">:</span><span class="at"> margin=2cm</span></span>
356
- <span id="cb14-26"><a href="#cb14-26" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">linestretch</span><span class="kw">:</span><span class="at"> </span><span class="dv">2</span></span>
357
- <span id="cb14-27"><a href="#cb14-27" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">numbersections</span><span class="kw">:</span><span class="at"> </span><span class="ch">false</span></span>
358
- <span id="cb14-28"><a href="#cb14-28" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">docx</span><span class="kw">:</span></span>
359
- <span id="cb14-29"><a href="#cb14-29" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">reference</span><span class="kw">:</span><span class="at"> </span><span class="ch">null</span></span>
360
- <span id="cb14-30"><a href="#cb14-30" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">crossref</span><span class="kw">:</span></span>
361
- <span id="cb14-31"><a href="#cb14-31" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">figPrefix</span><span class="kw">:</span><span class="at"> </span><span class="kw">[</span><span class="at">Fig.</span><span class="kw">,</span><span class="at"> Figs.</span><span class="kw">]</span></span>
362
- <span id="cb14-32"><a href="#cb14-32" aria-hidden="true" tabindex="-1"></a><span class="at"> </span><span class="fu">tblPrefix</span><span class="kw">:</span><span class="at"> </span><span class="kw">[</span><span class="at">Table</span><span class="kw">,</span><span class="at"> Tables</span><span class="kw">]</span></span></code></pre></div>
363
- <p>Create a new profile template (includes formatting
364
- section):</p>
365
- <div class="sourceCode" id="cb15"><pre
366
- class="sourceCode bash"><code class="sourceCode bash"><span id="cb15-1"><a href="#cb15-1" aria-hidden="true" tabindex="-1"></a><span class="fu">rev</span> profiles <span class="at">--new</span> <span class="st">&quot;My Journal&quot;</span></span></code></pre></div>
367
- <h3 id="cli-reference">CLI Reference</h3>
368
- <table>
369
- <thead>
370
- <tr>
371
- <th>Command</th>
372
- <th>Description</th>
373
- </tr>
374
- </thead>
375
- <tbody>
376
- <tr>
377
- <td><code>rev validate --list</code></td>
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- <td>List all profiles with formatting tags</td>
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- </tr>
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- <tr>
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- <td><code>rev validate -j nature</code></td>
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- <td>Validate against journal requirements</td>
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- </tr>
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- <tr>
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- <td><code>rev build -j nature</code></td>
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- <td>Build with journal formatting defaults</td>
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- </tr>
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- <tr>
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- <td><code>rev profiles --new "Name"</code></td>
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- <td>Create custom profile template</td>
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- </tr>
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- <tr>
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- <td><code>rev profiles --fetch-csl name</code></td>
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- <td>Download CSL style to cache</td>
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- </tr>
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- <tr>
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- <td><code>rev profiles --list-csl</code></td>
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- <td>List cached CSL styles</td>
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- </tr>
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- <tr>
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- <td><code>rev profiles --dirs</code></td>
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- <td>Show profile directory locations</td>
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- </tr>
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- </tbody>
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- </table>
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- </main>
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- <aside class="col-md-3 d-none d-md-block">
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- <nav id="toc" data-toggle="toc" aria-label="On this page">
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- <h2 class="h6">On this page</h2>
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- <div class="toc"><ul>
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- <li><a href="#configuration" id="toc-configuration">Configuration</a>
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- <ul>
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- <li><a href="#rev.yaml" id="toc-rev.yaml">rev.yaml</a></li>
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- <li><a href="#template-variables" id="toc-template-variables">Template
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- Variables</a></li>
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- <li><a href="#user-configuration" id="toc-user-configuration">User
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- Configuration</a></li>
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- <li><a href="#dictionaries" id="toc-dictionaries">Dictionaries</a></li>
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- <li><a href="#journal-profiles" id="toc-journal-profiles">Journal
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- Profiles</a>
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- <ul>
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- <li><a href="#setting-a-journal" id="toc-setting-a-journal">Setting a
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- Journal</a></li>
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- <li><a href="#config-cascade" id="toc-config-cascade">Config
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- Cascade</a></li>
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- <li><a href="#csl-citation-styles" id="toc-csl-citation-styles">CSL
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- Citation Styles</a></li>
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- <li><a href="#custom-profiles-with-formatting"
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- id="toc-custom-profiles-with-formatting">Custom Profiles with
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- Formatting</a></li>
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- <li><a href="#cli-reference" id="toc-cli-reference">CLI
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- Reference</a></li>
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- <span>docrev 0.9.15</span>
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