codegraph-java 0.1.0

package/dist/directory.js.map

@@ -0,0 +1 @@
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package/dist/errors.d.ts

@@ -0,0 +1,150 @@
+/**
+ * CodeGraph Error Classes
+ *
+ * Custom error types for better error handling and debugging.
+ *
+ * @module errors
+ *
+ * @example
+ * ```typescript
+ * import { FileError, ParseError, setLogger, silentLogger } from 'codegraph';
+ *
+ * // Catch specific error types
+ * try {
+ *   await cg.indexAll();
+ * } catch (error) {
+ *   if (error instanceof FileError) {
+ *     console.log(`File error at ${error.filePath}: ${error.message}`);
+ *   } else if (error instanceof ParseError) {
+ *     console.log(`Parse error at ${error.filePath}:${error.line}`);
+ *   }
+ * }
+ *
+ * // Disable logging for tests
+ * setLogger(silentLogger);
+ * ```
+ */
+/**
+ * Base error class for all CodeGraph errors.
+ *
+ * All CodeGraph-specific errors extend this class, allowing you to catch
+ * all CodeGraph errors with a single catch block.
+ *
+ * @example
+ * ```typescript
+ * try {
+ *   await cg.indexAll();
+ * } catch (error) {
+ *   if (error instanceof CodeGraphError) {
+ *     console.log(`CodeGraph error [${error.code}]: ${error.message}`);
+ *   }
+ * }
+ * ```
+ */
+export declare class CodeGraphError extends Error {
+    /** Error code for categorization (e.g., 'FILE_ERROR', 'PARSE_ERROR') */
+    readonly code: string;
+    /** Additional context about the error */
+    readonly context?: Record<string, unknown>;
+    constructor(message: string, code: string, context?: Record<string, unknown>);
+}
+/**
+ * Error reading or accessing files
+ */
+export declare class FileError extends CodeGraphError {
+    readonly filePath: string;
+    constructor(message: string, filePath: string, cause?: Error);
+}
+/**
+ * Error parsing source code
+ */
+export declare class ParseError extends CodeGraphError {
+    readonly filePath: string;
+    readonly line?: number;
+    readonly column?: number;
+    constructor(message: string, filePath: string, options?: {
+        line?: number;
+        column?: number;
+        cause?: Error;
+    });
+}
+/**
+ * Error with database operations
+ */
+export declare class DatabaseError extends CodeGraphError {
+    readonly operation: string;
+    constructor(message: string, operation: string, cause?: Error);
+}
+/**
+ * Error with search operations
+ */
+export declare class SearchError extends CodeGraphError {
+    readonly query: string;
+    constructor(message: string, query: string, cause?: Error);
+}
+/**
+ * Error with vector/embedding operations
+ */
+export declare class VectorError extends CodeGraphError {
+    constructor(message: string, operation: string, cause?: Error);
+}
+/**
+ * Error with configuration
+ */
+export declare class ConfigError extends CodeGraphError {
+    constructor(message: string, details?: Record<string, unknown>);
+}
+/**
+ * A refused path — the caller asked for something outside the project root, or
+ * for a sensitive system directory. Deliberately a plain `Error` and NOT a
+ * {@link CodeGraphError}: it is a security marker every read sink tests with
+ * `instanceof`, not a categorized operational failure, and the MCP layer treats
+ * it as one of the only two "stop trying" conditions (see `mcp/tools.ts`).
+ *
+ * It lives here — in the dependency-free error module — rather than next to its
+ * first caller so that a consumer can enforce the refusal WITHOUT importing the
+ * MCP tool graph. `mcp/tools.ts` re-exports it, so the class identity stays
+ * single and every existing `instanceof` check keeps working.
+ */
+export declare class PathRefusalError extends Error {
+}
+/**
+ * Simple logger for CodeGraph operations
+ *
+ * By default, logs to console.warn for warnings and console.error for errors.
+ * Can be configured to use custom logging.
+ */
+export interface Logger {
+    debug(message: string, context?: Record<string, unknown>): void;
+    warn(message: string, context?: Record<string, unknown>): void;
+    error(message: string, context?: Record<string, unknown>): void;
+}
+/**
+ * Default console-based logger
+ */
+export declare const defaultLogger: Logger;
+/**
+ * Silent logger (no output) - useful for tests
+ */
+export declare const silentLogger: Logger;
+/**
+ * Set the global logger
+ */
+export declare function setLogger(logger: Logger): void;
+/**
+ * Get the current logger
+ */
+export declare function getLogger(): Logger;
+/**
+ * Log a debug message
+ */
+export declare function logDebug(message: string, context?: Record<string, unknown>): void;
+/**
+ * Log a warning message
+ */
+export declare function logWarn(message: string, context?: Record<string, unknown>): void;
+/**
+ * Log an error message
+ */
+export declare function logError(message: string, context?: Record<string, unknown>): void;
+//# sourceMappingURL=errors.d.ts.map

package/dist/errors.d.ts.map

@@ -0,0 +1 @@
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package/dist/errors.js

@@ -0,0 +1,234 @@
+"use strict";
+/**
+ * CodeGraph Error Classes
+ *
+ * Custom error types for better error handling and debugging.
+ *
+ * @module errors
+ *
+ * @example
+ * ```typescript
+ * import { FileError, ParseError, setLogger, silentLogger } from 'codegraph';
+ *
+ * // Catch specific error types
+ * try {
+ *   await cg.indexAll();
+ * } catch (error) {
+ *   if (error instanceof FileError) {
+ *     console.log(`File error at ${error.filePath}: ${error.message}`);
+ *   } else if (error instanceof ParseError) {
+ *     console.log(`Parse error at ${error.filePath}:${error.line}`);
+ *   }
+ * }
+ *
+ * // Disable logging for tests
+ * setLogger(silentLogger);
+ * ```
+ */
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.silentLogger = exports.defaultLogger = exports.PathRefusalError = exports.ConfigError = exports.VectorError = exports.SearchError = exports.DatabaseError = exports.ParseError = exports.FileError = exports.CodeGraphError = void 0;
+exports.setLogger = setLogger;
+exports.getLogger = getLogger;
+exports.logDebug = logDebug;
+exports.logWarn = logWarn;
+exports.logError = logError;
+/**
+ * Base error class for all CodeGraph errors.
+ *
+ * All CodeGraph-specific errors extend this class, allowing you to catch
+ * all CodeGraph errors with a single catch block.
+ *
+ * @example
+ * ```typescript
+ * try {
+ *   await cg.indexAll();
+ * } catch (error) {
+ *   if (error instanceof CodeGraphError) {
+ *     console.log(`CodeGraph error [${error.code}]: ${error.message}`);
+ *   }
+ * }
+ * ```
+ */
+class CodeGraphError extends Error {
+    /** Error code for categorization (e.g., 'FILE_ERROR', 'PARSE_ERROR') */
+    code;
+    /** Additional context about the error */
+    context;
+    constructor(message, code, context) {
+        super(message);
+        this.name = 'CodeGraphError';
+        this.code = code;
+        this.context = context;
+        // Maintain proper stack trace for V8
+        if (Error.captureStackTrace) {
+            Error.captureStackTrace(this, this.constructor);
+        }
+    }
+}
+exports.CodeGraphError = CodeGraphError;
+/**
+ * Error reading or accessing files
+ */
+class FileError extends CodeGraphError {
+    filePath;
+    constructor(message, filePath, cause) {
+        super(message, 'FILE_ERROR', { filePath, cause: cause?.message });
+        this.name = 'FileError';
+        this.filePath = filePath;
+        if (cause) {
+            this.cause = cause;
+        }
+    }
+}
+exports.FileError = FileError;
+/**
+ * Error parsing source code
+ */
+class ParseError extends CodeGraphError {
+    filePath;
+    line;
+    column;
+    constructor(message, filePath, options) {
+        super(message, 'PARSE_ERROR', {
+            filePath,
+            line: options?.line,
+            column: options?.column,
+            cause: options?.cause?.message,
+        });
+        this.name = 'ParseError';
+        this.filePath = filePath;
+        this.line = options?.line;
+        this.column = options?.column;
+        if (options?.cause) {
+            this.cause = options.cause;
+        }
+    }
+}
+exports.ParseError = ParseError;
+/**
+ * Error with database operations
+ */
+class DatabaseError extends CodeGraphError {
+    operation;
+    constructor(message, operation, cause) {
+        super(message, 'DATABASE_ERROR', { operation, cause: cause?.message });
+        this.name = 'DatabaseError';
+        this.operation = operation;
+        if (cause) {
+            this.cause = cause;
+        }
+    }
+}
+exports.DatabaseError = DatabaseError;
+/**
+ * Error with search operations
+ */
+class SearchError extends CodeGraphError {
+    query;
+    constructor(message, query, cause) {
+        super(message, 'SEARCH_ERROR', { query, cause: cause?.message });
+        this.name = 'SearchError';
+        this.query = query;
+        if (cause) {
+            this.cause = cause;
+        }
+    }
+}
+exports.SearchError = SearchError;
+/**
+ * Error with vector/embedding operations
+ */
+class VectorError extends CodeGraphError {
+    constructor(message, operation, cause) {
+        super(message, 'VECTOR_ERROR', { operation, cause: cause?.message });
+        this.name = 'VectorError';
+        if (cause) {
+            this.cause = cause;
+        }
+    }
+}
+exports.VectorError = VectorError;
+/**
+ * Error with configuration
+ */
+class ConfigError extends CodeGraphError {
+    constructor(message, details) {
+        super(message, 'CONFIG_ERROR', details);
+        this.name = 'ConfigError';
+    }
+}
+exports.ConfigError = ConfigError;
+/**
+ * A refused path — the caller asked for something outside the project root, or
+ * for a sensitive system directory. Deliberately a plain `Error` and NOT a
+ * {@link CodeGraphError}: it is a security marker every read sink tests with
+ * `instanceof`, not a categorized operational failure, and the MCP layer treats
+ * it as one of the only two "stop trying" conditions (see `mcp/tools.ts`).
+ *
+ * It lives here — in the dependency-free error module — rather than next to its
+ * first caller so that a consumer can enforce the refusal WITHOUT importing the
+ * MCP tool graph. `mcp/tools.ts` re-exports it, so the class identity stays
+ * single and every existing `instanceof` check keeps working.
+ */
+class PathRefusalError extends Error {
+}
+exports.PathRefusalError = PathRefusalError;
+/**
+ * Default console-based logger
+ */
+exports.defaultLogger = {
+    debug(message, context) {
+        if (process.env.CODEGRAPH_DEBUG) {
+            console.debug(`[CodeGraph] ${message}`, context ?? '');
+        }
+    },
+    warn(message, context) {
+        console.warn(`[CodeGraph] ${message}`, context ?? '');
+    },
+    error(message, context) {
+        console.error(`[CodeGraph] ${message}`, context ?? '');
+    },
+};
+/**
+ * Silent logger (no output) - useful for tests
+ */
+exports.silentLogger = {
+    debug() { },
+    warn() { },
+    error() { },
+};
+/**
+ * Current logger instance (can be replaced)
+ */
+let currentLogger = exports.defaultLogger;
+/**
+ * Set the global logger
+ */
+function setLogger(logger) {
+    currentLogger = logger;
+}
+/**
+ * Get the current logger
+ */
+function getLogger() {
+    return currentLogger;
+}
+/**
+ * Log a debug message
+ */
+function logDebug(message, context) {
+    currentLogger.debug(message, context);
+}
+/**
+ * Log a warning message
+ */
+function logWarn(message, context) {
+    currentLogger.warn(message, context);
+}
+/**
+ * Log an error message
+ */
+function logError(message, context) {
+    currentLogger.error(message, context);
+}
+//# sourceMappingURL=errors.js.map

package/dist/errors.js.map

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package/dist/extraction/extraction-version.d.ts

@@ -0,0 +1,25 @@
+/**
+ * Extraction version
+ *
+ * A monotonically-increasing integer that identifies the *shape and depth* of
+ * what the extractor writes into the graph. Unlike `CURRENT_SCHEMA_VERSION`
+ * (which tracks the SQLite table layout and is migrated in place), this tracks
+ * the EXTRACTED CONTENT — node kinds, edges, synthesizers, resolver coverage.
+ *
+ * When an index was built by an older engine whose `EXTRACTION_VERSION` is
+ * below the running engine's, the data on disk is structurally fine but
+ * *stale*: it's missing whatever a newer extractor would now produce. A schema
+ * migration can't backfill that — only a re-index can. So this is the signal
+ * `cg status` uses to recommend a re-index, and the reason `codegraph
+ * upgrade` reminds users to refresh their projects.
+ *
+ * BUMP THIS when a release changes extraction output enough that existing
+ * indexes should be rebuilt to benefit — e.g. a new language/framework
+ * extractor, a new dynamic-dispatch synthesizer, a new node/edge kind, or a
+ * resolver fix that materially changes which edges exist. Do NOT bump for
+ * pure bug fixes, CLI/UX changes, or schema-only migrations. Over-bumping
+ * turns the re-index hint into noise — keep it honest (see CLAUDE.md, "Honesty
+ * in the product is load-bearing").
+ */
+export declare const EXTRACTION_VERSION = 26;
+//# sourceMappingURL=extraction-version.d.ts.map

package/dist/extraction/extraction-version.d.ts.map

@@ -0,0 +1 @@
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package/dist/extraction/extraction-version.js

@@ -0,0 +1,28 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.EXTRACTION_VERSION = void 0;
+/**
+ * Extraction version
+ *
+ * A monotonically-increasing integer that identifies the *shape and depth* of
+ * what the extractor writes into the graph. Unlike `CURRENT_SCHEMA_VERSION`
+ * (which tracks the SQLite table layout and is migrated in place), this tracks
+ * the EXTRACTED CONTENT — node kinds, edges, synthesizers, resolver coverage.
+ *
+ * When an index was built by an older engine whose `EXTRACTION_VERSION` is
+ * below the running engine's, the data on disk is structurally fine but
+ * *stale*: it's missing whatever a newer extractor would now produce. A schema
+ * migration can't backfill that — only a re-index can. So this is the signal
+ * `cg status` uses to recommend a re-index, and the reason `codegraph
+ * upgrade` reminds users to refresh their projects.
+ *
+ * BUMP THIS when a release changes extraction output enough that existing
+ * indexes should be rebuilt to benefit — e.g. a new language/framework
+ * extractor, a new dynamic-dispatch synthesizer, a new node/edge kind, or a
+ * resolver fix that materially changes which edges exist. Do NOT bump for
+ * pure bug fixes, CLI/UX changes, or schema-only migrations. Over-bumping
+ * turns the re-index hint into noise — keep it honest (see CLAUDE.md, "Honesty
+ * in the product is load-bearing").
+ */
+exports.EXTRACTION_VERSION = 26;
+//# sourceMappingURL=extraction-version.js.map

package/dist/extraction/extraction-version.js.map

@@ -0,0 +1 @@
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package/dist/extraction/function-ref.d.ts

@@ -0,0 +1,118 @@
+/**
+ * Function-as-value capture (#756) — registration-linking for callbacks.
+ *
+ * A function name used as a VALUE — passed as a call argument
+ * (`register_handler(target_cb)`, `signal(SIGINT, handler)`), assigned to a
+ * field or function pointer (`o->cb = target_cb`, `OnFire := TargetCb`),
+ * placed in a struct/object initializer (`{ .recv_cb = my_cb }`,
+ * `{ recv: targetCb }`, `Ops{Cb: targetCb}`), or listed in a function table
+ * (`static cb_t table[] = { cb_a, cb_b }`) — is a real dependency that static
+ * call extraction misses entirely: `callers(target_cb)` showed nothing but
+ * direct calls, so every callback looked dead and its registration sites were
+ * invisible to impact analysis.
+ *
+ * This module captures those value positions during the AST walk as
+ * `function_ref` candidates. Capture is table-driven per language (the value
+ * positions and wrapper forms differ per grammar — `&fn` in C, `Main::fn` in
+ * Java, `::fn` in Kotlin, `#selector(fn)` in Swift, `@TargetCb` in Pascal,
+ * `method(:fn)` in Ruby). Candidates are GATED at end-of-file extraction
+ * (see `TreeSitterExtractor.flushFnRefCandidates`): only names matching a
+ * same-file function/method or an imported binding survive, which bounds
+ * volume and keeps precision high. Resolution then matches survivors against
+ * function/method nodes ONLY (`matchFunctionRef` in
+ * `src/resolution/name-matcher.ts`) and persists them as `references` edges,
+ * which `callers`/`impact` already traverse.
+ *
+ * Deliberately NOT covered (resolving the *dispatch* — `o->cb(x)` → the
+ * registered function — needs data-flow through struct fields; a wrong edge
+ * is worse than none): indirect-call resolution and `obj.method` member
+ * values where `obj` isn't `this`/`self` (the receiver's type is statically
+ * unknowable without local data-flow).
+ */
+import type { Node as SyntaxNode } from 'web-tree-sitter';
+export interface FnRefCandidate {
+    name: string;
+    line: number;
+    column: number;
+    /** Which capture position produced this candidate (gate policy keys on it). */
+    mode: CaptureMode;
+    /**
+     * True when the value was an explicit reference form (`&fn`, `&Cls::m`,
+     * `::fn`, `#selector`, `method(:sym)`) rather than a bare identifier —
+     * C++'s flush policy keys on it.
+     */
+    explicitRef: boolean;
+    /**
+     * Skip the same-file/import name gate for this candidate. Set for PHP
+     * string callables in known HOF positions: PHP global functions are
+     * referenced cross-file WITHOUT imports (global namespace), so the gate
+     * can't see them — the strong positional prior (a string argument to
+     * `usort`/`array_map`/…) plus resolution's unique-or-drop rule carry the
+     * precision instead.
+     */
+    skipGate?: boolean;
+}
+/** How to pull candidate value nodes out of a dispatched container node. */
+type CaptureMode = 'args' | 'rhs' | 'value' | 'list' | 'varinit';
+interface CaptureRule {
+    mode: CaptureMode;
+    /** Field holding the value for rhs/value/varinit (defaults per mode). */
+    field?: string;
+}
+export interface FnRefSpec {
+    /** Bare identifier node types that can act as a function value. */
+    idTypes: Set<string>;
+    /** Container node type → how to extract candidate values from it. */
+    dispatch: Map<string, CaptureRule>;
+    /**
+     * Transparent wrapper layers between a container and its values
+     * (`argument`, `value_argument`, `literal_element`, `expression_list`…).
+     * Value: the field to descend into, or null for "named children".
+     * `expression_list` fans out to ALL named children (Go multi-assign).
+     */
+    layers?: Map<string, string | null>;
+    /**
+     * Unary wrappers whose operand is the function value — C/C++ `&fn`
+     * (pointer_expression), Pascal `@Fn` (exprUnary), Scala eta `fn _`
+     * (postfix_expression). Value: operand field, or null for first named child.
+     */
+    unwrap?: Map<string, string | null>;
+    /**
+     * Whole-node reference forms needing bespoke name extraction —
+     * `method_reference` (Java), `callable_reference` / `navigation_expression`
+     * (Kotlin), `selector_expression` (Swift `#selector` / ObjC `@selector`),
+     * Ruby `method(:sym)` calls, and `this.method` member forms.
+     */
+    special?: Set<string>;
+    /**
+     * Capture modes whose candidates skip the same-file/import gate and rely on
+     * resolution's unique-or-drop rule instead. C-family only: an initializer
+     * value, function-pointer assignment RHS, or table element is a
+     * function-pointer position by construction, and C has no symbol imports —
+     * the dominant repo-scale pattern (`server.c`'s command table naming
+     * handlers defined across files) would otherwise be invisible. Call
+     * arguments stay gated everywhere (locals passed as args dwarf callbacks).
+     */
+    ungatedModes?: Set<CaptureMode>;
+    /**
+     * C++ only: in args/rhs/varinit positions, accept ONLY explicit reference
+     * forms (`&fn`, `&Cls::method`) — never bare identifiers. C++ codebases are
+     * dense with generic free-function/accessor names (`begin`, `end`, `out`,
+     * `size`, `data`) that collide with parameters and locals, and out-of-line
+     * member definitions extract as function-kind nodes — bare-id matching on
+     * fmt was mostly wrong edges. File-scope initializer tables (value/list)
+     * still accept bare identifiers, same as C.
+     */
+    addressOfOnly?: boolean;
+}
+/**
+ * Capture specs by language.
+ */
+export declare const FN_REF_SPECS: Record<string, FnRefSpec | undefined>;
+/**
+ * Extract candidate names from a dispatched container node. Returns the
+ * (name, position) pairs of every function-value-shaped expression found.
+ */
+export declare function captureFnRefCandidates(container: SyntaxNode, rule: CaptureRule, spec: FnRefSpec, source: string): FnRefCandidate[];
+export {};
+//# sourceMappingURL=function-ref.d.ts.map

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