claude-flow 3.10.1 → 3.10.4

package/.claude/worktrees/adr-120-impl/v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts

@@ -1,4149 +0,0 @@
-/**
- * Hooks MCP Tools
- * Provides intelligent hooks functionality via MCP protocol
- */
-
-import { mkdirSync, writeFileSync, existsSync, readFileSync, statSync, unlinkSync, readdirSync, rmSync } from 'fs';
-import { dirname, join, resolve } from 'path';
-import { type MCPTool, getProjectCwd } from './types.js';
-import { validateIdentifier, validateText, validatePath } from './validate-input.js';
-
-// Real vector search functions - lazy loaded to avoid circular imports
-let searchEntriesFn: ((options: {
-  query: string;
-  namespace?: string;
-  limit?: number;
-  threshold?: number;
-}) => Promise<{
-  success: boolean;
-  results: { id: string; key: string; content: string; score: number; namespace: string }[];
-  searchTime: number;
-  error?: string;
-}>) | null = null;
-
-async function getRealSearchFunction() {
-  if (!searchEntriesFn) {
-    try {
-      const { searchEntries } = await import('../memory/memory-initializer.js');
-      searchEntriesFn = searchEntries;
-    } catch {
-      searchEntriesFn = null;
-    }
-  }
-  return searchEntriesFn;
-}
-
-// Real store function - lazy loaded
-let storeEntryFn: ((options: {
-  key: string;
-  value: string;
-  namespace?: string;
-  generateEmbeddingFlag?: boolean;
-  tags?: string[];
-  ttl?: number;
-}) => Promise<{
-  success: boolean;
-  id: string;
-  embedding?: { dimensions: number; model: string };
-  error?: string;
-}>) | null = null;
-
-async function getRealStoreFunction() {
-  if (!storeEntryFn) {
-    try {
-      const { storeEntry } = await import('../memory/memory-initializer.js');
-      storeEntryFn = storeEntry;
-    } catch {
-      storeEntryFn = null;
-    }
-  }
-  return storeEntryFn;
-}
-
-// =============================================================================
-// Neural Module Lazy Loaders (SONA, EWC++, MoE, LoRA, Flash Attention)
-// =============================================================================
-
-// SONA Optimizer - lazy loaded
-let sonaOptimizer: Awaited<ReturnType<typeof import('../memory/sona-optimizer.js').getSONAOptimizer>> | null = null;
-async function getSONAOptimizer() {
-  if (!sonaOptimizer) {
-    try {
-      const { getSONAOptimizer: getSona } = await import('../memory/sona-optimizer.js');
-      sonaOptimizer = await getSona();
-    } catch {
-      sonaOptimizer = null;
-    }
-  }
-  return sonaOptimizer;
-}
-
-// EWC++ Consolidator - lazy loaded
-let ewcConsolidator: Awaited<ReturnType<typeof import('../memory/ewc-consolidation.js').getEWCConsolidator>> | null = null;
-async function getEWCConsolidator() {
-  if (!ewcConsolidator) {
-    try {
-      const { getEWCConsolidator: getEWC } = await import('../memory/ewc-consolidation.js');
-      ewcConsolidator = await getEWC();
-    } catch {
-      ewcConsolidator = null;
-    }
-  }
-  return ewcConsolidator;
-}
-
-// MoE Router - lazy loaded
-// #1773 item 4 — moe-router migrated to @claude-flow/neural
-let moeRouter: Awaited<ReturnType<typeof import('@claude-flow/neural').getMoERouter>> | null = null;
-async function getMoERouter() {
-  if (!moeRouter) {
-    try {
-      const { getMoERouter: getMoE } = await import('@claude-flow/neural');
-      moeRouter = await getMoE();
-    } catch {
-      moeRouter = null;
-    }
-  }
-  return moeRouter;
-}
-
-// Semantic Router - lazy loaded
-// Tries native VectorDb first (16k+ routes/s HNSW), falls back to pure JS (47k routes/s cosine)
-let semanticRouter: import('../ruvector/semantic-router.js').SemanticRouter | null = null;
-let nativeVectorDb: unknown = null;
-let semanticRouterInitialized = false;
-let routerBackend: 'native' | 'pure-js' | 'none' = 'none';
-
-// Pre-computed embeddings for common task patterns (cached)
-const TASK_PATTERN_EMBEDDINGS: Map<string, Float32Array> = new Map();
-
-function generateSimpleEmbedding(text: string, dimension: number = 384): Float32Array {
-  // Simple deterministic embedding based on character codes
-  // This is for routing purposes where we need consistent, fast embeddings
-  const embedding = new Float32Array(dimension);
-  const normalized = text.toLowerCase().replace(/[^a-z0-9\s]/g, '');
-  const words = normalized.split(/\s+/).filter(w => w.length > 0);
-
-  // Combine word-level and character-level features
-  for (let i = 0; i < dimension; i++) {
-    let value = 0;
-
-    // Word-level features
-    for (let w = 0; w < words.length; w++) {
-      const word = words[w];
-      for (let c = 0; c < word.length; c++) {
-        const charCode = word.charCodeAt(c);
-        value += Math.sin((charCode * (i + 1) + w * 17 + c * 23) * 0.0137);
-      }
-    }
-
-    // Character-level features
-    for (let c = 0; c < text.length; c++) {
-      value += Math.cos((text.charCodeAt(c) * (i + 1) + c * 7) * 0.0073);
-    }
-
-    embedding[i] = value / Math.max(1, text.length);
-  }
-
-  // Normalize
-  let norm = 0;
-  for (let i = 0; i < dimension; i++) {
-    norm += embedding[i] * embedding[i];
-  }
-  norm = Math.sqrt(norm);
-  if (norm > 0) {
-    for (let i = 0; i < dimension; i++) {
-      embedding[i] /= norm;
-    }
-  }
-
-  return embedding;
-}
-
-// ── Runtime routing outcome persistence ──────────────────────────────
-// Closes the learning loop: post-task records outcomes → route loads them.
-
-const ROUTING_OUTCOMES_PATH = join(resolve('.'), '.claude-flow/routing-outcomes.json');
-
-const ROUTING_STOPWORDS = new Set([
-  'the','a','an','is','are','was','were','be','been','being','have','has','had',
-  'do','does','did','will','would','could','should','may','might','shall','can',
-  'to','of','in','for','on','with','at','by','from','as','into','through','during',
-  'before','after','above','below','between','under','again','further','then','once',
-  'it','its','this','that','these','those','i','me','my','we','our','you','your',
-  'he','she','they','them','and','but','or','nor','not','no','so','if','when','than',
-  'very','just','also','only','both','each','all','any','few','more','most','other',
-  'some','such','same','new','now','here','there','where','how','what','which','who',
-]);
-
-interface RoutingOutcome {
-  task: string;
-  agent: string;
-  success: boolean;
-  quality: number;
-  keywords: string[];
-  timestamp: string;
-}
-
-function extractKeywords(text: string): string[] {
-  if (!text) return [];
-  return text.toLowerCase()
-    .replace(/[^a-z0-9\s-]/g, ' ')
-    .split(/\s+/)
-    .filter(w => w.length > 2 && !ROUTING_STOPWORDS.has(w));
-}
-
-function loadRoutingOutcomes(): RoutingOutcome[] {
-  try {
-    if (existsSync(ROUTING_OUTCOMES_PATH)) {
-      const data = JSON.parse(readFileSync(ROUTING_OUTCOMES_PATH, 'utf-8'));
-      return data.outcomes || [];
-    }
-  } catch { /* corrupt file, start fresh */ }
-  return [];
-}
-
-function saveRoutingOutcomes(outcomes: RoutingOutcome[]): void {
-  try {
-    const dir = dirname(ROUTING_OUTCOMES_PATH);
-    if (!existsSync(dir)) mkdirSync(dir, { recursive: true });
-    // Cap at 500 entries to bound file size
-    const capped = outcomes.slice(-500);
-    writeFileSync(ROUTING_OUTCOMES_PATH, JSON.stringify({ outcomes: capped }, null, 2));
-  } catch { /* non-critical */ }
-}
-
-/**
- * Build learned routing patterns from successful task outcomes.
- * Returns patterns in the same shape as TASK_PATTERNS so they can be
- * merged into both the native HNSW and pure-JS semantic routers.
- */
-function loadLearnedPatterns(): Record<string, { keywords: string[]; agents: string[] }> {
-  const outcomes = loadRoutingOutcomes();
-  const byAgent: Record<string, Set<string>> = {};
-  for (const o of outcomes) {
-    if (!o.success || !o.agent || !o.keywords?.length) continue;
-    if (!byAgent[o.agent]) byAgent[o.agent] = new Set();
-    for (const kw of o.keywords) byAgent[o.agent].add(kw);
-  }
-  const patterns: Record<string, { keywords: string[]; agents: string[] }> = {};
-  for (const [agent, kwSet] of Object.entries(byAgent)) {
-    patterns[`learned-${agent}`] = {
-      keywords: [...kwSet].slice(0, 50),
-      agents: [agent],
-    };
-  }
-  return patterns;
-}
-
-/**
- * Merge static TASK_PATTERNS with runtime-learned patterns.
- * Static patterns take precedence (learned patterns won't overwrite them).
- */
-function getMergedTaskPatterns(): Record<string, { keywords: string[]; agents: string[] }> {
-  const merged = { ...TASK_PATTERNS };
-  const learned = loadLearnedPatterns();
-  for (const [key, pattern] of Object.entries(learned)) {
-    if (!merged[key]) {
-      merged[key] = pattern;
-    }
-  }
-  return merged;
-}
-
-// ── Static task patterns (used by both native and pure-JS routers) ───
-
-const TASK_PATTERNS: Record<string, { keywords: string[]; agents: string[] }> = {
-  'security-task': {
-    keywords: ['authentication', 'security', 'auth', 'password', 'encryption', 'vulnerability', 'cve', 'audit'],
-    agents: ['security-architect', 'security-auditor', 'reviewer'],
-  },
-  'testing-task': {
-    keywords: ['test', 'testing', 'spec', 'coverage', 'unit test', 'integration test', 'e2e'],
-    agents: ['tester', 'reviewer'],
-  },
-  'api-task': {
-    keywords: ['api', 'endpoint', 'rest', 'graphql', 'route', 'handler', 'controller'],
-    agents: ['architect', 'coder', 'tester'],
-  },
-  'performance-task': {
-    keywords: ['performance', 'optimize', 'speed', 'memory', 'benchmark', 'profiling', 'bottleneck'],
-    agents: ['performance-engineer', 'coder', 'tester'],
-  },
-  'refactor-task': {
-    keywords: ['refactor', 'restructure', 'clean', 'organize', 'modular', 'decouple'],
-    agents: ['architect', 'coder', 'reviewer'],
-  },
-  'bugfix-task': {
-    keywords: ['bug', 'fix', 'error', 'issue', 'broken', 'crash', 'debug'],
-    agents: ['coder', 'tester', 'reviewer'],
-  },
-  'feature-task': {
-    keywords: ['feature', 'implement', 'add', 'new', 'create', 'build'],
-    agents: ['architect', 'coder', 'tester'],
-  },
-  'database-task': {
-    keywords: ['database', 'sql', 'query', 'schema', 'migration', 'orm'],
-    agents: ['architect', 'coder', 'tester'],
-  },
-  'frontend-task': {
-    keywords: ['frontend', 'ui', 'component', 'react', 'css', 'style', 'layout'],
-    agents: ['coder', 'reviewer', 'tester'],
-  },
-  'devops-task': {
-    keywords: ['deploy', 'ci', 'cd', 'pipeline', 'docker', 'kubernetes', 'infrastructure'],
-    agents: ['devops', 'coder', 'tester'],
-  },
-  'swarm-task': {
-    keywords: ['swarm', 'agent', 'coordinator', 'hive', 'mesh', 'topology'],
-    agents: ['swarm-specialist', 'coordinator', 'architect'],
-  },
-  'memory-task': {
-    keywords: ['memory', 'cache', 'store', 'vector', 'embedding', 'persistence'],
-    agents: ['memory-specialist', 'architect', 'coder'],
-  },
-};
-
-/**
- * Get the semantic router with environment detection.
- * Tries native VectorDb first (HNSW, 16k routes/s), falls back to pure JS (47k routes/s cosine).
- */
-async function getSemanticRouter() {
-  if (semanticRouterInitialized) {
-    return { router: semanticRouter, backend: routerBackend, native: nativeVectorDb };
-  }
-  semanticRouterInitialized = true;
-
-  // STEP 1: Try native VectorDb from @ruvector/router (HNSW-backed)
-  // Note: Native VectorDb uses a persistent database file which can have lock issues
-  // in concurrent environments. We try it first but fall back gracefully to pure JS.
-  try {
-    // Use createRequire for ESM compatibility with native modules
-    const { createRequire } = await import('module');
-    const require = createRequire(import.meta.url);
-    const router = require('@ruvector/router');
-
-    if (router.VectorDb && router.DistanceMetric) {
-      // Try to create VectorDb - may fail with lock error in concurrent envs
-      const db = new router.VectorDb({
-        dimensions: 384,
-        distanceMetric: router.DistanceMetric.Cosine,
-        hnswM: 16,
-        hnswEfConstruction: 200,
-        hnswEfSearch: 100,
-      });
-
-      // Initialize with static + runtime-learned task patterns
-      for (const [patternName, { keywords }] of Object.entries(getMergedTaskPatterns())) {
-        for (const keyword of keywords) {
-          const embedding = generateSimpleEmbedding(keyword);
-          db.insert(`${patternName}:${keyword}`, embedding);
-          TASK_PATTERN_EMBEDDINGS.set(`${patternName}:${keyword}`, embedding);
-        }
-      }
-
-      nativeVectorDb = db;
-      routerBackend = 'native';
-      console.log('[hooks] Semantic router initialized: native VectorDb (HNSW, 16k+ routes/s)');
-      return { router: null, backend: routerBackend, native: nativeVectorDb };
-    }
-  } catch (err) {
-    // Native not available or database locked - fall back to pure JS
-    // Common errors: "Database already open. Cannot acquire lock." or "MODULE_NOT_FOUND"
-    // This is expected in concurrent environments or when binary isn't installed
-  }
-
-  // STEP 2: Fall back to pure JS SemanticRouter
-  try {
-    const { SemanticRouter } = await import('../ruvector/semantic-router.js');
-    semanticRouter = new SemanticRouter({ dimension: 384 });
-
-    for (const [patternName, { keywords, agents }] of Object.entries(getMergedTaskPatterns())) {
-      const embeddings = keywords.map(kw => generateSimpleEmbedding(kw));
-      semanticRouter.addIntentWithEmbeddings(patternName, embeddings, { agents, keywords });
-
-      // Cache embeddings for keywords
-      keywords.forEach((kw, i) => {
-        TASK_PATTERN_EMBEDDINGS.set(kw, embeddings[i]);
-      });
-    }
-
-    routerBackend = 'pure-js';
-    console.log('[hooks] Semantic router initialized: pure JS (cosine, 47k routes/s)');
-  } catch {
-    semanticRouter = null;
-    routerBackend = 'none';
-    console.log('[hooks] Semantic router initialized: none (no backend available)');
-  }
-
-  return { router: semanticRouter, backend: routerBackend, native: nativeVectorDb };
-}
-
-/**
- * Get router backend info for status display.
- */
-function getRouterBackendInfo(): { backend: string; speed: string } {
-  switch (routerBackend) {
-    case 'native':
-      return { backend: 'native VectorDb (HNSW)', speed: '16k+ routes/s' };
-    case 'pure-js':
-      return { backend: 'pure JS (cosine)', speed: '47k routes/s' };
-    default:
-      return { backend: 'none', speed: 'N/A' };
-  }
-}
-
-// Flash Attention - lazy loaded
-// #1773 item 4 — flash-attention migrated to @claude-flow/neural
-let flashAttention: Awaited<ReturnType<typeof import('@claude-flow/neural').getFlashAttention>> | null = null;
-async function getFlashAttention() {
-  if (!flashAttention) {
-    try {
-      const { getFlashAttention: getFlash } = await import('@claude-flow/neural');
-      flashAttention = await getFlash();
-    } catch {
-      flashAttention = null;
-    }
-  }
-  return flashAttention;
-}
-
-// LoRA Adapter - lazy loaded
-let loraAdapter: Awaited<ReturnType<typeof import('../ruvector/lora-adapter.js').getLoRAAdapter>> | null = null;
-async function getLoRAAdapter() {
-  if (!loraAdapter) {
-    try {
-      const { getLoRAAdapter: getLora } = await import('../ruvector/lora-adapter.js');
-      loraAdapter = await getLora();
-    } catch {
-      loraAdapter = null;
-    }
-  }
-  return loraAdapter;
-}
-
-// Trajectory storage for SONA learning
-interface TrajectoryStep {
-  action: string;
-  result: string;
-  quality: number;
-  timestamp: string;
-}
-
-interface TrajectoryData {
-  id: string;
-  task: string;
-  agent: string;
-  steps: TrajectoryStep[];
-  startedAt: string;
-  success?: boolean;
-  endedAt?: string;
-}
-
-// In-memory trajectory tracking (persisted on end)
-const activeTrajectories = new Map<string, TrajectoryData>();
-
-// Memory store types and helpers
-interface MemoryEntry {
-  key: string;
-  value: unknown;
-  metadata?: Record<string, unknown>;
-  storedAt: string;
-  accessCount: number;
-  lastAccessed: string;
-}
-
-interface MemoryStore {
-  entries: Record<string, MemoryEntry>;
-  version: string;
-}
-
-const MEMORY_DIR = '.claude-flow/memory';
-const MEMORY_FILE = 'store.json';
-
-function getMemoryPath(): string {
-  return resolve(join(MEMORY_DIR, MEMORY_FILE));
-}
-
-function loadMemoryStore(): MemoryStore {
-  try {
-    const path = getMemoryPath();
-    if (existsSync(path)) {
-      const data = readFileSync(path, 'utf-8');
-      return JSON.parse(data);
-    }
-  } catch {
-    // Return empty store on error
-  }
-  return { entries: {}, version: '3.0.0' };
-}
-
-/**
- * Get real intelligence statistics from memory store
- */
-function getIntelligenceStatsFromMemory(): {
-  trajectories: { total: number; successful: number };
-  patterns: { learned: number; categories: Record<string, number> };
-  memory: { indexSize: number; totalAccessCount: number; memorySizeBytes: number };
-  routing: { decisions: number; avgConfidence: number };
-} {
-  const store = loadMemoryStore();
-  const entries = Object.values(store.entries);
-
-  // Count trajectories (keys starting with "trajectory-" or containing trajectory data)
-  const trajectoryEntries = entries.filter(e =>
-    e.key.includes('trajectory') ||
-    (e.metadata?.type === 'trajectory')
-  );
-  const successfulTrajectories = trajectoryEntries.filter(e =>
-    e.metadata?.success === true ||
-    (typeof e.value === 'object' && e.value !== null && (e.value as Record<string, unknown>).success === true)
-  );
-
-  // Count patterns
-  const patternEntries = entries.filter(e =>
-    e.key.includes('pattern') ||
-    e.metadata?.type === 'pattern' ||
-    e.key.startsWith('learned-')
-  );
-
-  // Categorize patterns
-  const categories: Record<string, number> = {};
-  patternEntries.forEach(e => {
-    const category = (e.metadata?.category as string) || 'general';
-    categories[category] = (categories[category] || 0) + 1;
-  });
-
-  // Count routing decisions
-  const routingEntries = entries.filter(e =>
-    e.key.includes('routing') ||
-    e.metadata?.type === 'routing-decision'
-  );
-
-  // Calculate average confidence from routing decisions
-  let totalConfidence = 0;
-  let confidenceCount = 0;
-  routingEntries.forEach(e => {
-    const confidence = e.metadata?.confidence as number;
-    if (typeof confidence === 'number') {
-      totalConfidence += confidence;
-      confidenceCount++;
-    }
-  });
-
-  // Calculate total access count
-  const totalAccessCount = entries.reduce((sum, e) => sum + (e.accessCount || 0), 0);
-
-  // Calculate memory file size
-  let memorySizeBytes = 0;
-  try {
-    const memPath = getMemoryPath();
-    if (existsSync(memPath)) {
-      memorySizeBytes = statSync(memPath).size;
-    }
-  } catch {
-    // Ignore
-  }
-
-  return {
-    trajectories: {
-      total: trajectoryEntries.length,
-      successful: successfulTrajectories.length,
-    },
-    patterns: {
-      learned: patternEntries.length,
-      categories,
-    },
-    memory: {
-      indexSize: entries.length,
-      totalAccessCount,
-      memorySizeBytes,
-    },
-    routing: {
-      decisions: routingEntries.length,
-      avgConfidence: confidenceCount > 0 ? totalConfidence / confidenceCount : 0,
-    },
-  };
-}
-
-// Agent routing configuration - maps file types to recommended agents
-const AGENT_PATTERNS: Record<string, string[]> = {
-  '.ts': ['coder', 'architect', 'tester'],
-  '.tsx': ['coder', 'architect', 'reviewer'],
-  '.test.ts': ['tester', 'reviewer'],
-  '.spec.ts': ['tester', 'reviewer'],
-  '.md': ['researcher', 'documenter'],
-  '.json': ['coder', 'architect'],
-  '.yaml': ['coder', 'devops'],
-  '.yml': ['coder', 'devops'],
-  '.sh': ['devops', 'coder'],
-  '.py': ['coder', 'ml-developer', 'researcher'],
-  '.sql': ['coder', 'architect'],
-  '.css': ['coder', 'designer'],
-  '.scss': ['coder', 'designer'],
-};
-
-// Keyword patterns for fallback routing (when semantic routing doesn't match)
-const KEYWORD_PATTERNS: Record<string, { agents: string[]; confidence: number }> = {
-  'authentication': { agents: ['security-architect', 'coder', 'tester'], confidence: 0.9 },
-  'auth': { agents: ['security-architect', 'coder', 'tester'], confidence: 0.85 },
-  'api': { agents: ['architect', 'coder', 'tester'], confidence: 0.85 },
-  'test': { agents: ['tester', 'reviewer'], confidence: 0.95 },
-  'refactor': { agents: ['architect', 'coder', 'reviewer'], confidence: 0.9 },
-  'performance': { agents: ['performance-engineer', 'coder', 'tester'], confidence: 0.88 },
-  'security': { agents: ['security-architect', 'security-auditor', 'reviewer'], confidence: 0.92 },
-  'database': { agents: ['architect', 'coder', 'tester'], confidence: 0.85 },
-  'frontend': { agents: ['coder', 'designer', 'tester'], confidence: 0.82 },
-  'backend': { agents: ['architect', 'coder', 'tester'], confidence: 0.85 },
-  'bug': { agents: ['coder', 'tester', 'reviewer'], confidence: 0.88 },
-  'fix': { agents: ['coder', 'tester', 'reviewer'], confidence: 0.85 },
-  'feature': { agents: ['architect', 'coder', 'tester'], confidence: 0.8 },
-  'swarm': { agents: ['swarm-specialist', 'coordinator', 'architect'], confidence: 0.9 },
-  'memory': { agents: ['memory-specialist', 'architect', 'coder'], confidence: 0.88 },
-  'deploy': { agents: ['devops', 'coder', 'tester'], confidence: 0.85 },
-  'ci/cd': { agents: ['devops', 'coder'], confidence: 0.9 },
-};
-
-function getFileExtension(filePath: string): string {
-  const match = filePath.match(/\.[a-zA-Z0-9]+$/);
-  return match ? match[0] : '';
-}
-
-function suggestAgentsForFile(filePath: string): string[] {
-  const ext = getFileExtension(filePath);
-
-  // Check for test files first
-  if (filePath.includes('.test.') || filePath.includes('.spec.')) {
-    return AGENT_PATTERNS['.test.ts'] || ['tester', 'reviewer'];
-  }
-
-  return AGENT_PATTERNS[ext] || ['coder', 'architect'];
-}
-
-function suggestAgentsForTask(task: string): { agents: string[]; confidence: number } {
-  const taskLower = task.toLowerCase();
-
-  // Check static keyword patterns first
-  for (const [pattern, result] of Object.entries(KEYWORD_PATTERNS)) {
-    if (taskLower.includes(pattern)) {
-      return result;
-    }
-  }
-
-  // Check runtime-learned patterns from successful task outcomes
-  const taskKeywords = extractKeywords(task);
-  if (taskKeywords.length > 0) {
-    const outcomes = loadRoutingOutcomes();
-    let bestAgent = '';
-    let bestOverlap = 0;
-
-    for (const outcome of outcomes) {
-      if (!outcome.success || !outcome.agent || !outcome.keywords?.length) continue;
-      const overlap = taskKeywords.filter(kw => outcome.keywords.includes(kw)).length;
-      if (overlap > bestOverlap) {
-        bestOverlap = overlap;
-        bestAgent = outcome.agent;
-      }
-    }
-
-    // Require at least 2 keyword overlap to prevent false positives
-    if (bestAgent && bestOverlap >= 2) {
-      return { agents: [bestAgent], confidence: Math.min(0.6 + bestOverlap * 0.05, 0.85) };
-    }
-  }
-
-  // Default fallback
-  return { agents: ['coder', 'researcher', 'tester'], confidence: 0.7 };
-}
-
-function assessCommandRisk(command: string): { risk: string; level: number; warnings: string[] } {
-  const warnings: string[] = [];
-  let level = 0;
-
-  // High risk commands
-  if (command.includes('rm -rf') || command.includes('rm -r')) {
-    level = Math.max(level, 0.9);
-    warnings.push('Recursive deletion detected - verify target path');
-  }
-  if (command.includes('sudo')) {
-    level = Math.max(level, 0.7);
-    warnings.push('Elevated privileges requested');
-  }
-  if (command.includes('> /') || command.includes('>> /')) {
-    level = Math.max(level, 0.6);
-    warnings.push('Writing to system path');
-  }
-  if (command.includes('chmod') || command.includes('chown')) {
-    level = Math.max(level, 0.5);
-    warnings.push('Permission modification');
-  }
-  if (command.includes('curl') && command.includes('|')) {
-    level = Math.max(level, 0.8);
-    warnings.push('Piping remote content to shell');
-  }
-
-  // Safe commands
-  if (command.startsWith('npm ') || command.startsWith('npx ')) {
-    level = Math.min(level, 0.3);
-  }
-  if (command.startsWith('git ')) {
-    level = Math.min(level, 0.2);
-  }
-  if (command.startsWith('ls ') || command.startsWith('cat ') || command.startsWith('echo ')) {
-    level = Math.min(level, 0.1);
-  }
-
-  const risk = level >= 0.7 ? 'high' : level >= 0.4 ? 'medium' : 'low';
-
-  return { risk, level, warnings };
-}
-
-// MCP Tool implementations - return raw data for direct CLI use
-export const hooksPreEdit: MCPTool = {
-  name: 'hooks_pre-edit',
-  description: 'Get context and agent suggestions before editing a file Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      filePath: { type: 'string', description: 'Path to the file being edited' },
-      operation: { type: 'string', description: 'Type of operation (create, update, delete, refactor)' },
-      context: { type: 'string', description: 'Additional context' },
-    },
-    required: ['filePath'],
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const filePath = params.filePath as string;
-    const operation = (params.operation as string) || 'update';
-
-    { const v = validatePath(filePath, 'filePath'); if (!v.valid) return { success: false, error: v.error }; }
-
-    const suggestedAgents = suggestAgentsForFile(filePath);
-    const ext = getFileExtension(filePath);
-
-    return {
-      filePath,
-      operation,
-      context: {
-        fileExists: true,
-        fileType: ext || 'unknown',
-        relatedFiles: [],
-        suggestedAgents,
-        patterns: [
-          { pattern: `${ext} file editing`, confidence: 0.85 },
-        ],
-        risks: operation === 'delete' ? ['File deletion is irreversible'] : [],
-      },
-      recommendations: [
-        `Recommended agents: ${suggestedAgents.join(', ')}`,
-        'Run tests after changes',
-      ],
-    };
-  },
-};
-
-export const hooksPostEdit: MCPTool = {
-  name: 'hooks_post-edit',
-  description: 'Record editing outcome for learning Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      filePath: { type: 'string', description: 'Path to the edited file' },
-      success: { type: 'boolean', description: 'Whether the edit was successful' },
-      agent: { type: 'string', description: 'Agent that performed the edit' },
-    },
-    required: ['filePath'],
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const filePath = params.filePath as string;
-    const success = params.success !== false;
-    const agent = params.agent as string | undefined;
-
-    { const v = validatePath(filePath, 'filePath'); if (!v.valid) return { success: false, error: v.error }; }
-    if (agent) { const v = validateIdentifier(agent, 'agent'); if (!v.valid) return { success: false, error: v.error }; }
-
-    // Wire recordFeedback through bridge (issue #1209)
-    let feedbackResult: { success: boolean; controller: string; updated: number } | null = null;
-    try {
-      const bridge = await import('../memory/memory-bridge.js');
-      feedbackResult = await bridge.bridgeRecordFeedback({
-        taskId: `edit-${filePath}-${Date.now()}`,
-        success,
-        quality: success ? 0.85 : 0.3,
-        agent,
-      });
-    } catch {
-      // Bridge not available — continue with basic response
-    }
-
-    return {
-      recorded: true,
-      filePath,
-      success,
-      timestamp: new Date().toISOString(),
-      learningUpdate: success ? 'pattern_reinforced' : 'pattern_adjusted',
-      feedback: feedbackResult ? {
-        recorded: feedbackResult.success,
-        controller: feedbackResult.controller,
-        updates: feedbackResult.updated,
-      } : { recorded: false, controller: 'unavailable', updates: 0 },
-    };
-  },
-};
-
-export const hooksPreCommand: MCPTool = {
-  name: 'hooks_pre-command',
-  description: 'Assess risk before executing a command Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      command: { type: 'string', description: 'Command to execute' },
-    },
-    required: ['command'],
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const command = params.command as string;
-
-    { const v = validateText(command, 'command'); if (!v.valid) return { success: false, error: v.error }; }
-
-    const assessment = assessCommandRisk(command);
-
-    const riskLevel = assessment.level >= 0.8 ? 'critical'
-      : assessment.level >= 0.6 ? 'high'
-        : assessment.level >= 0.3 ? 'medium'
-          : 'low';
-
-    return {
-      command,
-      riskLevel,
-      risks: assessment.warnings.map((warning, i) => ({
-        type: `risk-${i + 1}`,
-        severity: assessment.level >= 0.6 ? 'high' : 'medium',
-        description: warning,
-      })),
-      recommendations: assessment.warnings.length > 0
-        ? ['Review warnings before proceeding', 'Consider using safer alternative']
-        : ['Command appears safe to execute'],
-      safeAlternatives: [],
-      shouldProceed: assessment.level < 0.7,
-    };
-  },
-};
-
-export const hooksPostCommand: MCPTool = {
-  name: 'hooks_post-command',
-  description: 'Record command execution outcome Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      command: { type: 'string', description: 'Executed command' },
-      exitCode: { type: 'number', description: 'Command exit code' },
-    },
-    required: ['command'],
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const command = params.command as string;
-    const exitCode = (params.exitCode as number) || 0;
-    const success = exitCode === 0;
-
-    { const v = validateText(command, 'command'); if (!v.valid) return { success: false, error: v.error }; }
-
-    // Persist command outcome via AgentDB
-    let _storedIn: 'agentdb' | 'json-store' | 'none' = 'none';
-    try {
-      const bridge = await import('../memory/memory-bridge.js');
-      await bridge.bridgeStoreEntry({
-        key: `cmd-${Date.now()}`,
-        value: JSON.stringify({ command, exitCode, success }),
-        namespace: 'commands',
-        tags: [success ? 'success' : 'error'],
-      });
-      _storedIn = 'agentdb';
-    } catch {
-      // AgentDB not available — store in JSON
-      try {
-        const store = loadMemoryStore();
-        const key = `cmd-${Date.now()}`;
-        store.entries[key] = { key, value: JSON.stringify({ command, exitCode, success }), namespace: 'commands', createdAt: new Date().toISOString() } as any;
-        const memDir = resolve(MEMORY_DIR);
-        if (!existsSync(memDir)) mkdirSync(memDir, { recursive: true });
-        writeFileSync(getMemoryPath(), JSON.stringify(store, null, 2), 'utf-8');
-        _storedIn = 'json-store';
-      } catch { /* non-critical */ }
-    }
-
-    return {
-      recorded: _storedIn !== 'none',
-      command,
-      exitCode,
-      success,
-      timestamp: new Date().toISOString(),
-      _storedIn,
-    };
-  },
-};
-
-export const hooksRoute: MCPTool = {
-  name: 'hooks_route',
-  description: 'Get a 3-tier routing recommendation for a task: Tier 1 (Agent Booster, 0ms / $0 — for var-to-const, add-types, etc.), Tier 2 (Haiku — simple), Tier 3 (Sonnet/Opus — complex). Use this BEFORE spawning an agent to avoid sending simple transforms to Sonnet. Native tools have no equivalent — Claude Code does not introspect its own model-selection cost. Returns the recommended model + a `[AGENT_BOOSTER_AVAILABLE]` literal when the WASM bypass applies. Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      task: { type: 'string', description: 'Task description' },
-      context: { type: 'string', description: 'Additional context' },
-      useSemanticRouter: { type: 'boolean', description: 'Use semantic similarity routing (default: true)' },
-    },
-    required: ['task'],
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const task = params.task as string;
-    const context = params.context as string | undefined;
-    const useSemanticRouter = params.useSemanticRouter !== false;
-
-    { const v = validateText(task, 'task'); if (!v.valid) return { success: false, error: v.error }; }
-    if (context) { const v = validateText(context, 'context'); if (!v.valid) return { success: false, error: v.error }; }
-
-    // Phase 5: Try AgentDB's SemanticRouter / LearningSystem first
-    if (useSemanticRouter) {
-      try {
-        const bridge = await import('../memory/memory-bridge.js');
-        const agentdbRoute = await bridge.bridgeRouteTask({ task, context });
-        if (agentdbRoute && agentdbRoute.confidence > 0.5) {
-          const agents = agentdbRoute.agents.length > 0 ? agentdbRoute.agents : ['coder', 'researcher'];
-          const complexity = task.length > 200 ? 'high' : task.length < 50 ? 'low' : 'medium';
-          return {
-            task,
-            routing: {
-              method: `agentdb-${agentdbRoute.controller}`,
-              backend: agentdbRoute.controller,
-              latencyMs: 0,
-              throughput: 'N/A',
-            },
-            matchedPattern: agentdbRoute.route,
-            semanticMatches: [{ pattern: agentdbRoute.route, score: agentdbRoute.confidence }],
-            primaryAgent: {
-              type: agents[0],
-              confidence: Math.round(agentdbRoute.confidence * 100) / 100,
-              reason: `AgentDB ${agentdbRoute.controller}: "${agentdbRoute.route}" (${Math.round(agentdbRoute.confidence * 100)}%)`,
-            },
-            alternativeAgents: agents.slice(1).map((agent, i) => ({
-              type: agent,
-              confidence: Math.round((agentdbRoute.confidence - (0.1 * (i + 1))) * 100) / 100,
-              reason: `Alternative from ${agentdbRoute.controller}`,
-            })),
-            estimatedMetrics: {
-              successProbability: Math.round(agentdbRoute.confidence * 100) / 100,
-              estimatedDuration: complexity === 'high' ? '2-4 hours' : complexity === 'medium' ? '30-60 min' : '10-30 min',
-              complexity,
-            },
-            swarmRecommendation: agents.length > 2 ? { topology: 'hierarchical', agents, coordination: 'queen-led' } : null,
-          };
-        }
-      } catch {
-        // AgentDB router not available — fall through to local routing
-      }
-    }
-
-    // Get router (tries native VectorDb first, falls back to pure JS)
-    const { router, backend, native } = useSemanticRouter
-      ? await getSemanticRouter()
-      : { router: null, backend: 'none' as const, native: null };
-
-    let semanticResult: { intent: string; score: number; metadata: Record<string, unknown> }[] = [];
-    let routingMethod = 'keyword';
-    let routingLatencyMs = 0;
-    let backendInfo = '';
-
-    const queryText = context ? `${task} ${context}` : task;
-    const queryEmbedding = generateSimpleEmbedding(queryText);
-
-    // Try native VectorDb (HNSW-backed)
-    if (native && backend === 'native') {
-      const routeStart = performance.now();
-      try {
-        // eslint-disable-next-line @typescript-eslint/no-explicit-any
-        const results = (native as any).search(queryEmbedding, 5);
-        routingLatencyMs = performance.now() - routeStart;
-        routingMethod = 'semantic-native';
-        backendInfo = 'native VectorDb (HNSW)';
-
-        // Convert results to semantic format
-        const mergedPatterns = getMergedTaskPatterns();
-        semanticResult = results.map((r: { id: string; score: number }) => {
-          const [patternName] = r.id.split(':');
-          const pattern = mergedPatterns[patternName];
-          return {
-            intent: patternName,
-            score: 1 - r.score, // Native uses distance (lower is better), convert to similarity
-            metadata: {
-              agents: pattern?.agents || (patternName.startsWith('learned-') ? [patternName.slice(8)] : ['coder']),
-            },
-          };
-        });
-      } catch {
-        // Native failed, try pure JS fallback
-      }
-    }
-
-    // Try pure JS SemanticRouter fallback
-    if (router && backend === 'pure-js' && semanticResult.length === 0) {
-      const routeStart = performance.now();
-      semanticResult = router.routeWithEmbedding(queryEmbedding, 3);
-      routingLatencyMs = performance.now() - routeStart;
-      routingMethod = 'semantic-pure-js';
-      backendInfo = 'pure JS (cosine similarity)';
-    }
-
-    // Get agents from semantic routing or fall back to keyword
-    let agents: string[];
-    let confidence: number;
-    let matchedPattern = '';
-
-    if (semanticResult.length > 0 && semanticResult[0].score > 0.4) {
-      const topMatch = semanticResult[0];
-      agents = (topMatch.metadata.agents as string[]) || ['coder', 'researcher'];
-      confidence = topMatch.score;
-      matchedPattern = topMatch.intent;
-    } else {
-      // Fall back to keyword matching
-      const suggestion = suggestAgentsForTask(task);
-      agents = suggestion.agents;
-      confidence = suggestion.confidence;
-      matchedPattern = 'keyword-fallback';
-      routingMethod = 'keyword';
-      backendInfo = 'keyword matching';
-    }
-
-    // Determine complexity
-    const taskLower = task.toLowerCase();
-    const complexity = taskLower.includes('complex') || taskLower.includes('architecture') || task.length > 200
-      ? 'high'
-      : taskLower.includes('simple') || taskLower.includes('fix') || task.length < 50
-        ? 'low'
-        : 'medium';
-
-    return {
-      task,
-      routing: {
-        method: routingMethod,
-        backend: backendInfo,
-        latencyMs: routingLatencyMs,
-        throughput: routingLatencyMs > 0 ? `${Math.round(1000 / routingLatencyMs)} routes/s` : 'N/A',
-      },
-      matchedPattern,
-      semanticMatches: semanticResult.slice(0, 3).map(r => ({
-        pattern: r.intent,
-        score: Math.round(r.score * 100) / 100,
-      })),
-      primaryAgent: {
-        type: agents[0],
-        confidence: Math.round(confidence * 100) / 100,
-        reason: routingMethod.startsWith('semantic')
-          ? `Semantic similarity to "${matchedPattern}" pattern (${Math.round(confidence * 100)}%)`
-          : `Task contains keywords matching ${agents[0]} specialization`,
-      },
-      alternativeAgents: agents.slice(1).map((agent, i) => ({
-        type: agent,
-        confidence: Math.round((confidence - (0.1 * (i + 1))) * 100) / 100,
-        reason: `Alternative agent for ${agent} capabilities`,
-      })),
-      estimatedMetrics: {
-        successProbability: Math.round(confidence * 100) / 100,
-        estimatedDuration: complexity === 'high' ? '2-4 hours' : complexity === 'medium' ? '30-60 min' : '10-30 min',
-        complexity,
-      },
-      swarmRecommendation: agents.length > 2 ? {
-        topology: 'hierarchical',
-        agents,
-        coordination: 'queen-led',
-      } : null,
-    };
-  },
-};
-
-export const hooksMetrics: MCPTool = {
-  name: 'hooks_metrics',
-  description: 'View learning metrics dashboard Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      period: { type: 'string', description: 'Metrics period (1h, 24h, 7d, 30d)' },
-      includeV3: { type: 'boolean', description: 'Include V3 performance metrics' },
-    },
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const period = (params.period as string) || '24h';
-
-    // ADR-093 F1: read from the same trajectory/pattern store that
-    // hooks_post-task and hooks_intelligence_stats write to. Previously
-    // this handler key-substring-filtered the memory store for "pattern",
-    // "route", "task" — none of which match the trajectory keys that
-    // post-task actually writes — so counters stayed at 0 forever (#1686).
-    const stats = getIntelligenceStatsFromMemory();
-
-    // Routing outcomes are persisted to a separate file (loadRoutingOutcomes)
-    // by post-task; surface them so the dashboard sees command counters too.
-    let routingOutcomes: Array<{ success: boolean; agent?: string }> = [];
-    try {
-      routingOutcomes = loadRoutingOutcomes() as Array<{ success: boolean; agent?: string }>;
-    } catch { /* non-fatal */ }
-
-    const totalCommands = routingOutcomes.length;
-    const successfulCommands = routingOutcomes.filter(o => o.success).length;
-    const successRate = totalCommands > 0 ? successfulCommands / totalCommands : null;
-
-    // Compute top agent from routing outcomes
-    const agentCounts: Record<string, number> = {};
-    for (const o of routingOutcomes) {
-      if (o.agent) agentCounts[o.agent] = (agentCounts[o.agent] || 0) + 1;
-    }
-    const topAgent = Object.entries(agentCounts).sort((a, b) => b[1] - a[1])[0]?.[0] ?? null;
-
-    const successful = stats.trajectories.successful;
-    const total = stats.trajectories.total;
-    const failed = Math.max(0, total - successful);
-
-    return {
-      _real: true,
-      _dataSource: 'intelligence-stats + routing-outcomes',
-      period,
-      patterns: {
-        total: stats.patterns.learned,
-        successful,
-        failed,
-        avgConfidence: stats.routing.avgConfidence || null,
-      },
-      agents: {
-        routingAccuracy: stats.routing.avgConfidence || null,
-        totalRoutes: stats.routing.decisions,
-        topAgent,
-      },
-      commands: {
-        totalExecuted: totalCommands,
-        successRate,
-        avgRiskScore: null,
-      },
-      _note: total === 0 && totalCommands === 0
-        ? 'No metrics data collected yet. Run hooks_post-task / hooks_intelligence_trajectory-end / hooks_route to populate.'
-        : undefined,
-      lastUpdated: new Date().toISOString(),
-    };
-  },
-};
-
-export const hooksList: MCPTool = {
-  name: 'hooks_list',
-  description: 'List all registered hooks Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {},
-  },
-  handler: async () => {
-    return {
-      hooks: [
-        // Core hooks
-        { name: 'pre-edit', type: 'PreToolUse', status: 'active' },
-        { name: 'post-edit', type: 'PostToolUse', status: 'active' },
-        { name: 'pre-command', type: 'PreToolUse', status: 'active' },
-        { name: 'post-command', type: 'PostToolUse', status: 'active' },
-        { name: 'pre-task', type: 'PreToolUse', status: 'active' },
-        { name: 'post-task', type: 'PostToolUse', status: 'active' },
-        // Routing hooks
-        { name: 'route', type: 'intelligence', status: 'active' },
-        { name: 'explain', type: 'intelligence', status: 'active' },
-        // Session hooks
-        { name: 'session-start', type: 'SessionStart', status: 'active' },
-        { name: 'session-end', type: 'SessionEnd', status: 'active' },
-        { name: 'session-restore', type: 'SessionStart', status: 'active' },
-        // Learning hooks
-        { name: 'pretrain', type: 'intelligence', status: 'active' },
-        { name: 'build-agents', type: 'intelligence', status: 'active' },
-        { name: 'transfer', type: 'intelligence', status: 'active' },
-        { name: 'metrics', type: 'analytics', status: 'active' },
-        // System hooks
-        { name: 'init', type: 'system', status: 'active' },
-        { name: 'notify', type: 'coordination', status: 'active' },
-        // Intelligence subcommands
-        { name: 'intelligence', type: 'intelligence', status: 'active' },
-        { name: 'intelligence_trajectory-start', type: 'intelligence', status: 'active' },
-        { name: 'intelligence_trajectory-step', type: 'intelligence', status: 'active' },
-        { name: 'intelligence_trajectory-end', type: 'intelligence', status: 'active' },
-        { name: 'intelligence_pattern-store', type: 'intelligence', status: 'active' },
-        { name: 'intelligence_pattern-search', type: 'intelligence', status: 'active' },
-        { name: 'intelligence_stats', type: 'analytics', status: 'active' },
-        { name: 'intelligence_learn', type: 'intelligence', status: 'active' },
-        { name: 'intelligence_attention', type: 'intelligence', status: 'active' },
-      ],
-      total: 26,
-    };
-  },
-};
-
-export const hooksPreTask: MCPTool = {
-  name: 'hooks_pre-task',
-  description: 'Record task start and get agent suggestions with intelligent model routing (ADR-026) Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      taskId: { type: 'string', description: 'Task identifier' },
-      description: { type: 'string', description: 'Task description' },
-      filePath: { type: 'string', description: 'Optional file path for AST analysis' },
-    },
-    required: ['taskId', 'description'],
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const taskId = params.taskId as string;
-    const description = params.description as string;
-    const filePath = params.filePath as string | undefined;
-
-    { const v = validateIdentifier(taskId, 'taskId'); if (!v.valid) return { success: false, error: v.error }; }
-    { const v = validateText(description, 'description'); if (!v.valid) return { success: false, error: v.error }; }
-    if (filePath) { const v = validatePath(filePath, 'filePath'); if (!v.valid) return { success: false, error: v.error }; }
-
-    const suggestion = suggestAgentsForTask(description);
-
-    // Determine complexity
-    const descLower = description.toLowerCase();
-    const complexity: 'low' | 'medium' | 'high' = descLower.includes('complex') || descLower.includes('architecture') || description.length > 200
-      ? 'high'
-      : descLower.includes('simple') || descLower.includes('fix') || description.length < 50
-        ? 'low'
-        : 'medium';
-
-    // Enhanced model routing with Agent Booster AST (ADR-026)
-    let modelRouting: Record<string, unknown> | undefined;
-    try {
-      const { getEnhancedModelRouter } = await import('../ruvector/enhanced-model-router.js');
-      const router = getEnhancedModelRouter();
-      const routeResult = await router.route(description, { filePath });
-
-      if (routeResult.tier === 1) {
-        // Agent Booster can handle this task
-        modelRouting = {
-          tier: 1,
-          handler: 'agent-booster',
-          canSkipLLM: true,
-          agentBoosterIntent: routeResult.agentBoosterIntent?.type,
-          intentDescription: routeResult.agentBoosterIntent?.description,
-          confidence: routeResult.confidence,
-          estimatedLatencyMs: routeResult.estimatedLatencyMs,
-          estimatedCost: routeResult.estimatedCost,
-          recommendation: `[AGENT_BOOSTER_AVAILABLE] Skip LLM - use Agent Booster for "${routeResult.agentBoosterIntent?.type}"`,
-        };
-      } else {
-        // LLM required
-        modelRouting = {
-          tier: routeResult.tier,
-          handler: routeResult.handler,
-          model: routeResult.model,
-          complexity: routeResult.complexity,
-          confidence: routeResult.confidence,
-          estimatedLatencyMs: routeResult.estimatedLatencyMs,
-          estimatedCost: routeResult.estimatedCost,
-          recommendation: `[TASK_MODEL_RECOMMENDATION] Use model="${routeResult.model}" for this task`,
-        };
-      }
-    } catch {
-      // Enhanced router not available
-    }
-
-    return {
-      taskId,
-      description,
-      suggestedAgents: suggestion.agents.map((agent, i) => ({
-        type: agent,
-        confidence: suggestion.confidence - (0.05 * i),
-        reason: i === 0
-          ? `Primary agent for ${agent} tasks based on learned patterns`
-          : `Alternative agent with ${agent} capabilities`,
-      })),
-      complexity,
-      estimatedDuration: complexity === 'high' ? '2-4 hours' : complexity === 'medium' ? '30-60 min' : '10-30 min',
-      risks: complexity === 'high' ? ['Complex task may require multiple iterations'] : [],
-      recommendations: [
-        `Use ${suggestion.agents[0]} as primary agent`,
-        suggestion.agents.length > 2 ? 'Consider using swarm coordination' : 'Single agent recommended',
-      ],
-      modelRouting,
-      timestamp: new Date().toISOString(),
-    };
-  },
-};
-
-export const hooksPostTask: MCPTool = {
-  name: 'hooks_post-task',
-  description: 'Record task completion for learning Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      taskId: { type: 'string', description: 'Task identifier' },
-      success: { type: 'boolean', description: 'Whether task was successful' },
-      agent: { type: 'string', description: 'Agent that completed the task' },
-      quality: { type: 'number', description: 'Quality score (0-1)' },
-      task: { type: 'string', description: 'Task description text (used for learning keyword extraction)' },
-      storeDecisions: { type: 'boolean', description: 'Also store routing decision in memory DB' },
-    },
-    required: ['taskId'],
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const taskId = params.taskId as string;
-    const success = params.success !== false;
-    const agent = params.agent as string | undefined;
-    const quality = (params.quality as number) || (success ? 0.85 : 0.3);
-    const startTime = Date.now();
-
-    { const v = validateIdentifier(taskId, 'taskId'); if (!v.valid) return { success: false, error: v.error }; }
-    if (agent) { const v = validateIdentifier(agent, 'agent'); if (!v.valid) return { success: false, error: v.error }; }
-
-    // Phase 3: Wire recordFeedback through bridge → LearningSystem + ReasoningBank
-    let feedbackResult: { success: boolean; controller: string; updated: number } | null = null;
-    try {
-      const bridge = await import('../memory/memory-bridge.js');
-      feedbackResult = await bridge.bridgeRecordFeedback({
-        taskId,
-        success,
-        quality,
-        agent,
-        duration: (params.duration as number) || undefined,
-        patterns: (params.patterns as string[]) || undefined,
-      });
-    } catch {
-      // Bridge not available — continue with basic response
-    }
-
-    // Phase 3: Record causal edge (task → outcome)
-    try {
-      const bridge = await import('../memory/memory-bridge.js');
-      await bridge.bridgeRecordCausalEdge({
-        sourceId: taskId,
-        targetId: `outcome-${taskId}`,
-        relation: success ? 'succeeded' : 'failed',
-        weight: quality,
-      });
-    } catch {
-      // Non-fatal
-    }
-
-    // Record trajectory via intelligence module (SONA + ReasoningBank)
-    try {
-      const intelligence = await import('../memory/intelligence.js');
-      await intelligence.recordTrajectory(
-        [{ type: 'result' as const, content: (params.task as string) || taskId, metadata: { success, agent, quality }, timestamp: Date.now() }],
-        success ? 'success' : 'failure'
-      );
-    } catch {
-      // Intelligence module not available — non-fatal
-    }
-
-    // Persist routing outcome for runtime learning (file-based, always reliable)
-    const taskText = (params.task as string) || '';
-    const outcomeKeywords = extractKeywords(taskText);
-    let outcomePersisted = false;
-    if (taskText && agent && agent.length <= 100 && /^[a-zA-Z0-9_-]+$/.test(agent)) {
-      try {
-        const outcomes = loadRoutingOutcomes();
-        outcomes.push({
-          task: taskText,
-          agent,
-          success,
-          quality,
-          keywords: outcomeKeywords,
-          timestamp: new Date().toISOString(),
-        });
-        saveRoutingOutcomes(outcomes);
-        outcomePersisted = true;
-      } catch { /* non-critical */ }
-    }
-
-    // Optionally store in memory DB for cross-session vector retrieval
-    if (params.storeDecisions && taskText && agent) {
-      try {
-        const storeFn = await getRealStoreFunction();
-        if (storeFn) {
-          await storeFn({
-            key: `routing-decision:${taskId}`,
-            namespace: 'patterns',
-            value: JSON.stringify({ task: taskText, agent, success, quality, keywords: outcomeKeywords }),
-            tags: ['routing-decision'],
-          });
-        }
-      } catch { /* non-critical */ }
-    }
-
-    const duration = Date.now() - startTime;
-
-    // Persist to auto-memory-store for statusline visibility
-    try {
-      const dataDir = join(getProjectCwd(), '.claude-flow', 'data');
-      if (!existsSync(dataDir)) mkdirSync(dataDir, { recursive: true });
-      const storePath = join(dataDir, 'auto-memory-store.json');
-      let store: Array<Record<string, unknown>> = [];
-      try {
-        if (existsSync(storePath)) {
-          const parsed = JSON.parse(readFileSync(storePath, 'utf-8'));
-          store = Array.isArray(parsed) ? parsed : [];
-        }
-      } catch { /* start fresh */ }
-      store.push({
-        id: `task-${taskId}`,
-        key: taskId,
-        content: `Task ${success ? 'completed' : 'failed'}: ${taskText || taskId}${agent ? ` (agent: ${agent})` : ''}`,
-        namespace: 'tasks',
-        type: 'task-outcome',
-        metadata: { agent, success, quality },
-        createdAt: Date.now(),
-      });
-      writeFileSync(storePath, JSON.stringify(store, null, 2), 'utf-8');
-    } catch { /* non-critical */ }
-
-    return {
-      taskId,
-      success,
-      duration,
-      learningUpdates: {
-        patternsUpdated: feedbackResult?.updated || (success ? 2 : 1),
-        newPatterns: success ? 1 : 0,
-        trajectoryId: `traj-${Date.now()}`,
-        controller: feedbackResult?.controller || 'none',
-        outcomePersisted,
-      },
-      quality,
-      feedback: feedbackResult ? {
-        recorded: feedbackResult.success,
-        controller: feedbackResult.controller,
-        updates: feedbackResult.updated,
-      } : { recorded: false, controller: 'unavailable', updates: 0 },
-      timestamp: new Date().toISOString(),
-    };
-  },
-};
-
-// Explain hook - transparent routing explanation
-export const hooksExplain: MCPTool = {
-  name: 'hooks_explain',
-  description: 'Explain routing decision with full transparency Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      task: { type: 'string', description: 'Task description' },
-      agent: { type: 'string', description: 'Specific agent to explain' },
-      verbose: { type: 'boolean', description: 'Verbose explanation' },
-    },
-    required: ['task'],
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const task = params.task as string;
-
-    { const v = validateText(task, 'task'); if (!v.valid) return { success: false, error: v.error }; }
-
-    const suggestion = suggestAgentsForTask(task);
-    const taskLower = task.toLowerCase();
-
-    // Determine matched patterns
-    const matchedPatterns: Array<{ pattern: string; matchScore: number; examples: string[] }> = [];
-    for (const [pattern, _result] of Object.entries(TASK_PATTERNS)) {
-      if (taskLower.includes(pattern)) {
-        matchedPatterns.push({
-          pattern,
-          matchScore: pattern.length / Math.max(taskLower.length, 1), // real ratio: pattern length vs task length
-          examples: [`Keyword "${pattern}" matched in task description`],
-        });
-      }
-    }
-
-    // Calculate real historical success rate from routing outcomes file
-    let historicalSuccess: number | null = null;
-    let historicalNote = 'No historical data yet';
-    try {
-      const outcomesPath = join(resolve('.'), '.claude-flow/routing-outcomes.json');
-      if (existsSync(outcomesPath)) {
-        const data = JSON.parse(readFileSync(outcomesPath, 'utf-8'));
-        const outcomes: Array<{ success: boolean }> = data.outcomes || [];
-        if (outcomes.length > 0) {
-          historicalSuccess = outcomes.filter(o => o.success).length / outcomes.length;
-          historicalNote = `Calculated from ${outcomes.length} recorded outcomes`;
-        }
-      }
-    } catch {
-      // File unreadable; leave as null
-    }
-
-    return {
-      task,
-      explanation: `The routing decision was made based on keyword analysis of the task description. ` +
-        `The task contains keywords that match the "${suggestion.agents[0]}" specialization with ${(suggestion.confidence * 100).toFixed(0)}% confidence.`,
-      factors: [
-        { factor: 'Keyword Match', weight: 0.4, value: suggestion.confidence, impact: 'Primary routing signal' },
-        { factor: 'Historical Success', weight: 0.3, value: historicalSuccess, impact: historicalNote },
-        { factor: 'Agent Availability', weight: 0.2, value: null, impact: 'Agent availability tracking not implemented' },
-        { factor: 'Task Complexity', weight: 0.1, value: task.length > 100 ? 0.8 : 0.3, impact: 'Complexity assessment' },
-      ],
-      patterns: matchedPatterns.length > 0 ? matchedPatterns : [
-        { pattern: 'general-task', matchScore: 0.7, examples: ['Default pattern for unclassified tasks'] }
-      ],
-      decision: {
-        agent: suggestion.agents[0],
-        confidence: suggestion.confidence,
-        reasoning: [
-          `Task analysis identified ${matchedPatterns.length || 1} relevant patterns`,
-          `"${suggestion.agents[0]}" has highest capability match for this task type`,
-          historicalSuccess !== null
-            ? `Historical success rate for similar tasks: ${(historicalSuccess * 100).toFixed(0)}%`
-            : `No historical outcome data available yet`,
-          `Confidence threshold met (${(suggestion.confidence * 100).toFixed(0)}% >= 70%)`,
-        ],
-      },
-    };
-  },
-};
-
-// Pretrain hook - repository analysis for intelligence bootstrap
-export const hooksPretrain: MCPTool = {
-  name: 'hooks_pretrain',
-  description: 'Analyze repository to bootstrap intelligence (4-step pipeline) Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      path: { type: 'string', description: 'Repository path' },
-      depth: { type: 'string', description: 'Analysis depth (shallow, medium, deep)' },
-      skipCache: { type: 'boolean', description: 'Skip cached analysis' },
-    },
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const repoPath = resolve((params.path as string) || '.');
-    const depth = (params.depth as string) || 'medium';
-    const startTime = performance.now();
-
-    // Real file scanning — count files by extension, extract patterns.
-    // (readdirSync/statSync already imported statically at the top.)
-    const extCounts: Record<string, number> = {};
-    let filesAnalyzed = 0;
-    // #1953: separate budget for code files. The old code gated the
-    // import-pattern extraction on `filesAnalyzed <= 50`, which counts
-    // EVERY directory entry (including .md/.yaml/.db/.log). In any
-    // markdown/docs-heavy repo, the depth-first walker burned through the
-    // 50-file budget on non-code files before reaching any source — so
-    // `patternsExtracted: 0` even when hundreds of `.ts`/`.js` files existed.
-    let codeFilesScanned = 0;
-    let totalLines = 0;
-    const maxDepth = depth === 'shallow' ? 2 : depth === 'deep' ? 6 : 4;
-    const patterns: string[] = [];
-
-    // #1953: recurse into directories that typically contain code first
-    // (`src/`, `apps/`, `packages/`, `lib/`, `crates/`, `workers/`, `server/`)
-    // before docs / specs / planning dirs, so the import-extraction budget
-    // is spent on the highest-signal directories even in mixed repos.
-    const CODE_DIR_PREFIXES = new Set([
-      'src', 'apps', 'packages', 'lib', 'crates', 'workers',
-      'server', 'backend', 'frontend', 'app', 'cli', 'core',
-    ]);
-    const scoreEntry = (name: string): number => {
-      if (CODE_DIR_PREFIXES.has(name)) return 0;
-      // Deprioritise common docs / output directories.
-      if (/^(docs?|specs?|_.*|examples?|samples?|out|build|target|coverage|tests?)$/.test(name)) return 2;
-      return 1;
-    };
-
-    const scan = (dir: string, currentDepth: number) => {
-      if (currentDepth > maxDepth) return;
-      try {
-        const entries = readdirSync(dir, { withFileTypes: true });
-        // Sort: code-likely dirs first, files mixed in by name, deprioritised
-        // dirs last. Stable for deterministic test behaviour.
-        entries.sort((a, b) => {
-          const sa = a.isDirectory() ? scoreEntry(a.name) : 1;
-          const sb = b.isDirectory() ? scoreEntry(b.name) : 1;
-          return sa - sb;
-        });
-        for (const entry of entries) {
-          if (entry.name.startsWith('.') || entry.name === 'node_modules' || entry.name === 'dist') continue;
-          const full = join(dir, entry.name);
-          if (entry.isDirectory()) {
-            scan(full, currentDepth + 1);
-          } else if (entry.isFile()) {
-            const ext = entry.name.includes('.') ? entry.name.slice(entry.name.lastIndexOf('.')) : '';
-            if (ext) extCounts[ext] = (extCounts[ext] || 0) + 1;
-            filesAnalyzed++;
-            // For code files, count lines and extract imports
-            if (['.ts', '.js', '.tsx', '.jsx', '.mjs', '.cjs', '.py', '.go', '.rs', '.java'].includes(ext)) {
-              try {
-                const content = readFileSync(full, 'utf-8');
-                const lines = content.split('\n');
-                totalLines += lines.length;
-                // #1953: gate on the code-file count, not every-file count.
-                // Also widened the per-file scan window from 30 → 80 lines:
-                // modern TS files often have license headers + JSDoc + type
-                // imports before the first `import` statement.
-                if (++codeFilesScanned <= 50) {
-                  for (const line of lines.slice(0, 80)) {
-                    if (line.startsWith('import ') || line.startsWith('from ') || (line.startsWith('const ') && line.includes('require('))) {
-                      const trimmed = line.trim();
-                      if (trimmed.length < 120 && !patterns.includes(trimmed)) patterns.push(trimmed);
-                      if (patterns.length >= 100) break;
-                    }
-                  }
-                }
-              } catch { /* skip unreadable */ }
-            }
-          }
-        }
-      } catch { /* skip inaccessible dirs */ }
-    };
-
-    scan(repoPath, 0);
-    const elapsed = Math.round(performance.now() - startTime);
-
-    // Store extracted patterns in AgentDB
-    let patternsStored = 0;
-    try {
-      const bridge = await import('../memory/memory-bridge.js');
-      await bridge.bridgeStoreEntry({
-        key: `pretrain-${Date.now()}`,
-        value: JSON.stringify({ filesAnalyzed, totalLines, topExtensions: Object.entries(extCounts).sort((a, b) => b[1] - a[1]).slice(0, 10), importPatterns: patterns.slice(0, 20) }),
-        namespace: 'pretrain',
-        tags: ['pretrain', depth],
-      });
-      patternsStored = patterns.length;
-    } catch { /* AgentDB not available */ }
-
-    // #1847: when the corpus contains files but no patterns were extracted
-    // (typical for Markdown vaults), make the source-code-only extraction
-    // contract explicit so users don't conclude the hook system is broken.
-    const SUPPORTED_EXTRACTION_EXTS = ['.ts', '.js', '.tsx', '.jsx', '.mjs', '.cjs', '.py', '.go', '.rs', '.java'];
-    let note: string | undefined;
-    if (filesAnalyzed > 0 && patterns.length === 0) {
-      const codeFileCount = SUPPORTED_EXTRACTION_EXTS.reduce(
-        (sum, ext) => sum + (extCounts[ext] ?? 0),
-        0,
-      );
-      note = codeFileCount === 0
-        ? `No source-code patterns found. hooks_pretrain extracts import/require lines from ${SUPPORTED_EXTRACTION_EXTS.join('/')} files only — Markdown/text/asset corpora produce zero patterns by design. This is not a hook-system failure; live trajectories and statusline are independent.`
-        : `Found ${codeFileCount} source-code file(s) but extracted zero import/require patterns. They may be empty, generated, or use non-standard module syntax.`;
-    }
-
-    return {
-      success: true,
-      _real: true,
-      path: repoPath,
-      depth,
-      durationMs: elapsed,
-      stats: {
-        filesAnalyzed,
-        totalLines,
-        patternsExtracted: patterns.length,
-        patternsStored,
-        fileTypes: Object.entries(extCounts).sort((a, b) => b[1] - a[1]).slice(0, 15).map(([ext, count]) => ({ ext, count })),
-        // #1847: explicit extraction contract so callers can tell pretrain
-        // patterns apart from live trajectories and hook statusline state.
-        sources: {
-          extractedFrom: SUPPORTED_EXTRACTION_EXTS,
-          scope: 'pretrain-only (live trajectories + statusline are tracked separately)',
-        },
-      },
-      ...(note ? { note } : {}),
-    };
-  },
-};
-
-// Build agents hook - generate optimized agent configs
-export const hooksBuildAgents: MCPTool = {
-  name: 'hooks_build-agents',
-  description: 'Generate optimized agent configurations from pretrain data Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      outputDir: { type: 'string', description: 'Output directory for configs' },
-      focus: { type: 'string', description: 'Focus area (v3-implementation, security, performance, all)' },
-      format: { type: 'string', description: 'Config format (yaml, json)' },
-      persist: { type: 'boolean', description: 'Write configs to disk' },
-    },
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const outputDir = resolve((params.outputDir as string) || './agents');
-    const focus = (params.focus as string) || 'all';
-    const format = (params.format as string) || 'yaml';
-    const persist = params.persist !== false; // Default to true
-
-    const agents = [
-      { type: 'coder', configFile: join(outputDir, `coder.${format}`), capabilities: ['code-generation', 'refactoring', 'debugging'], optimizations: ['flash-attention', 'token-reduction'] },
-      { type: 'architect', configFile: join(outputDir, `architect.${format}`), capabilities: ['system-design', 'api-design', 'documentation'], optimizations: ['context-caching', 'memory-persistence'] },
-      { type: 'tester', configFile: join(outputDir, `tester.${format}`), capabilities: ['unit-testing', 'integration-testing', 'coverage'], optimizations: ['parallel-execution'] },
-      { type: 'security-architect', configFile: join(outputDir, `security-architect.${format}`), capabilities: ['threat-modeling', 'vulnerability-analysis', 'security-review'], optimizations: ['pattern-matching'] },
-      { type: 'reviewer', configFile: join(outputDir, `reviewer.${format}`), capabilities: ['code-review', 'quality-analysis', 'best-practices'], optimizations: ['incremental-analysis'] },
-    ];
-
-    const filteredAgents = focus === 'all' ? agents :
-      focus === 'security' ? agents.filter(a => a.type.includes('security') || a.type === 'reviewer') :
-      focus === 'performance' ? agents.filter(a => ['coder', 'tester'].includes(a.type)) :
-      agents;
-
-    // Persist configs to disk if requested
-    if (persist) {
-      // Ensure output directory exists
-      if (!existsSync(outputDir)) {
-        mkdirSync(outputDir, { recursive: true });
-      }
-
-      // Write each agent config
-      for (const agent of filteredAgents) {
-        const config = {
-          type: agent.type,
-          capabilities: agent.capabilities,
-          optimizations: agent.optimizations,
-          version: '3.0.0',
-          createdAt: new Date().toISOString(),
-        };
-
-        const content = format === 'json'
-          ? JSON.stringify(config, null, 2)
-          : `# ${agent.type} agent configuration\ntype: ${agent.type}\nversion: "3.0.0"\ncapabilities:\n${agent.capabilities.map(c => `  - ${c}`).join('\n')}\noptimizations:\n${agent.optimizations.map(o => `  - ${o}`).join('\n')}\ncreatedAt: "${config.createdAt}"\n`;
-
-        writeFileSync(agent.configFile, content, 'utf-8');
-      }
-    }
-
-    return {
-      outputDir,
-      focus,
-      persisted: persist,
-      agents: filteredAgents,
-      stats: {
-        configsGenerated: filteredAgents.length,
-        patternsApplied: filteredAgents.length * 3,
-        optimizationsIncluded: filteredAgents.reduce((acc, a) => acc + a.optimizations.length, 0),
-      },
-    };
-  },
-};
-
-// Transfer hook - transfer patterns from another project
-export const hooksTransfer: MCPTool = {
-  name: 'hooks_transfer',
-  description: 'Transfer learned patterns from another project Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      sourcePath: { type: 'string', description: 'Source project path' },
-      filter: { type: 'string', description: 'Filter patterns by type' },
-      minConfidence: { type: 'number', description: 'Minimum confidence threshold' },
-    },
-    required: ['sourcePath'],
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const sourcePath = params.sourcePath as string;
-    const minConfidence = (params.minConfidence as number) || 0.7;
-    const filter = params.filter as string;
-
-    { const v = validatePath(sourcePath, 'sourcePath'); if (!v.valid) return { success: false, error: v.error }; }
-    if (filter) { const v = validateIdentifier(filter, 'filter'); if (!v.valid) return { success: false, error: v.error }; }
-
-    // Try to load patterns from source project's memory store
-    const sourceMemoryPath = join(resolve(sourcePath), MEMORY_DIR, MEMORY_FILE);
-    let sourceStore: MemoryStore = { entries: {}, version: '3.0.0' };
-
-    try {
-      if (existsSync(sourceMemoryPath)) {
-        sourceStore = JSON.parse(readFileSync(sourceMemoryPath, 'utf-8'));
-      }
-    } catch {
-      // Fall back to empty store
-    }
-
-    const sourceEntries = Object.values(sourceStore.entries);
-
-    // Count patterns by type from source
-    const byType: Record<string, number> = {
-      'file-patterns': sourceEntries.filter(e => e.key.includes('file') || e.metadata?.type === 'file-pattern').length,
-      'task-routing': sourceEntries.filter(e => e.key.includes('routing') || e.metadata?.type === 'routing').length,
-      'command-risk': sourceEntries.filter(e => e.key.includes('command') || e.metadata?.type === 'command-risk').length,
-      'agent-success': sourceEntries.filter(e => e.key.includes('agent') || e.metadata?.type === 'agent-success').length,
-    };
-
-    // If source has no patterns, report honestly instead of substituting demo data
-    if (Object.values(byType).every(v => v === 0)) {
-      return {
-        success: false,
-        message: 'No patterns found in source project',
-        sourcePath,
-        transferred: 0,
-      };
-    }
-
-    if (filter) {
-      Object.keys(byType).forEach(key => {
-        if (!key.includes(filter)) delete byType[key];
-      });
-    }
-
-    const total = Object.values(byType).reduce((a, b) => a + b, 0);
-
-    return {
-      success: true,
-      sourcePath,
-      transferred: {
-        total,
-        byType,
-      },
-      skipped: {
-        lowConfidence: Math.floor(total * 0.15),
-        duplicates: Math.floor(total * 0.08),
-        conflicts: Math.floor(total * 0.03),
-      },
-      stats: {
-        avgConfidence: 0.82 + (minConfidence > 0.8 ? 0.1 : 0),
-        avgAge: '3 days',
-      },
-      dataSource: 'source-project',
-    };
-  },
-};
-
-// Session start hook - auto-starts daemon
-export const hooksSessionStart: MCPTool = {
-  name: 'hooks_session-start',
-  description: 'Initialize a new session and auto-start daemon Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      sessionId: { type: 'string', description: 'Optional session ID' },
-      restoreLatest: { type: 'boolean', description: 'Restore latest session state' },
-      startDaemon: { type: 'boolean', description: 'Start worker daemon (default: false — opt-in to prevent unintended token usage)' },
-    },
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const sessionId = (params.sessionId as string) || `session-${Date.now()}`;
-    const restoreLatest = params.restoreLatest as boolean;
-    const shouldStartDaemon = params.startDaemon === true;
-
-    if (params.sessionId) { const v = validateIdentifier(params.sessionId as string, 'sessionId'); if (!v.valid) return { success: false, error: v.error }; }
-
-    // Auto-regenerate statusline if outdated (fixes older installs)
-    // Checks for the old fake heuristic: "Math.floor(sizeKB / 2)"
-    try {
-      const statuslinePath = join(getProjectCwd(), '.claude', 'helpers', 'statusline.cjs');
-      if (existsSync(statuslinePath)) {
-        const content = readFileSync(statuslinePath, 'utf-8');
-        if (content.includes('Math.floor(sizeKB / 2)') || content.includes('Maturity fallback')) {
-          // Old version detected — regenerate from current generator
-          const { generateStatuslineScript } = await import('../init/statusline-generator.js');
-          const newContent = generateStatuslineScript({
-            runtime: { maxAgents: 15, topology: 'hierarchical', strategy: 'specialized' },
-          } as any);
-          writeFileSync(statuslinePath, newContent, 'utf-8');
-        }
-      }
-    } catch {
-      // Non-critical — old statusline continues to work, just with stale heuristics
-    }
-
-    // Auto-start daemon if enabled
-    let daemonStatus: { started: boolean; pid?: number; error?: string } = { started: false };
-    if (shouldStartDaemon) {
-      try {
-        // Dynamic import to avoid circular dependencies
-        const { startDaemon } = await import('../services/worker-daemon.js');
-        const daemon = await startDaemon(getProjectCwd());
-        const status = daemon.getStatus();
-        daemonStatus = {
-          started: true,
-          pid: status.pid,
-        };
-      } catch (error) {
-        daemonStatus = {
-          started: false,
-          error: error instanceof Error ? error.message : String(error),
-        };
-      }
-    }
-
-    // Initialize intelligence module (SONA + local ReasoningBank)
-    let intelligenceStatus: { sonaEnabled: boolean; reasoningBankEnabled: boolean } = { sonaEnabled: false, reasoningBankEnabled: false };
-    try {
-      const intelligence = await import('../memory/intelligence.js');
-      const initResult = await intelligence.initializeIntelligence();
-      intelligenceStatus = { sonaEnabled: initResult.sonaEnabled, reasoningBankEnabled: initResult.reasoningBankEnabled };
-    } catch {
-      // Intelligence module not available — non-fatal
-    }
-
-    // Phase 5: Wire ReflexionMemory session start via bridge
-    let sessionMemory: { controller: string; restoredPatterns: number } | null = null;
-    try {
-      const bridge = await import('../memory/memory-bridge.js');
-      const result = await bridge.bridgeSessionStart({
-        sessionId,
-        context: restoreLatest ? 'restore previous session patterns' : 'new session',
-      });
-      if (result) {
-        sessionMemory = {
-          controller: result.controller,
-          restoredPatterns: result.restoredPatterns,
-        };
-      }
-    } catch {
-      // Bridge not available
-    }
-
-    // Persist session record to auto-memory-store for statusline visibility
-    try {
-      const dataDir = join(getProjectCwd(), '.claude-flow', 'data');
-      if (!existsSync(dataDir)) mkdirSync(dataDir, { recursive: true });
-      const storePath = join(dataDir, 'auto-memory-store.json');
-      let store: Array<Record<string, unknown>> = [];
-      try {
-        if (existsSync(storePath)) {
-          const raw = readFileSync(storePath, 'utf-8');
-          const parsed = JSON.parse(raw);
-          store = Array.isArray(parsed) ? parsed : [];
-        }
-      } catch { /* start fresh */ }
-      // Add session entry (dedup by session ID)
-      const entryId = `session-${sessionId}`;
-      const existing = store.findIndex((e: Record<string, unknown>) => e.id === entryId);
-      const entry = {
-        id: entryId,
-        key: sessionId,
-        content: `Session started: ${sessionId}`,
-        namespace: 'sessions',
-        type: 'session',
-        createdAt: Date.now(),
-      };
-      if (existing >= 0) store[existing] = entry;
-      else store.push(entry);
-      writeFileSync(storePath, JSON.stringify(store, null, 2), 'utf-8');
-    } catch {
-      // Non-critical — statusline just won't show this session
-    }
-
-    return {
-      sessionId,
-      started: new Date().toISOString(),
-      restored: restoreLatest,
-      config: {
-        intelligenceEnabled: true,
-        hooksEnabled: true,
-        memoryPersistence: true,
-        daemonEnabled: shouldStartDaemon,
-      },
-      daemon: daemonStatus,
-      sessionMemory: sessionMemory || { controller: 'none', restoredPatterns: 0 },
-      previousSession: restoreLatest ? {
-        id: `session-${Date.now() - 86400000}`,
-        tasksRestored: sessionMemory?.restoredPatterns || 0,
-        memoryRestored: sessionMemory?.restoredPatterns || 0,
-      } : null,
-    };
-  },
-};
-
-// Session end hook - stops daemon
-export const hooksSessionEnd: MCPTool = {
-  name: 'hooks_session-end',
-  description: 'End current session, stop daemon, and persist state Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      saveState: { type: 'boolean', description: 'Save session state' },
-      exportMetrics: { type: 'boolean', description: 'Export session metrics' },
-      stopDaemon: { type: 'boolean', description: 'Stop worker daemon (default: true)' },
-    },
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const saveState = params.saveState !== false;
-    const shouldStopDaemon = params.stopDaemon !== false;
-    const sessionId = `session-${Date.now() - 3600000}`; // Default session (1 hour ago)
-
-    // Stop daemon if enabled
-    let daemonStopped = false;
-    if (shouldStopDaemon) {
-      try {
-        const { stopDaemon } = await import('../services/worker-daemon.js');
-        await stopDaemon();
-        daemonStopped = true;
-      } catch {
-        // Daemon may not be running
-      }
-    }
-
-    // Read actual counts from stores
-    const store = loadMemoryStore();
-    const allEntries = Object.values(store.entries);
-    const taskCount = allEntries.filter(e => e.key.includes('task')).length;
-    const agentCount = allEntries.filter(e => e.key.includes('agent')).length;
-    const patternCount = allEntries.filter(e => e.key.includes('pattern')).length;
-    const trajectoryCount = activeTrajectories.size;
-
-    // Check for pending-insights.jsonl
-    let insightCount = 0;
-    try {
-      const insightsPath = resolve(join('.claude-flow', 'data', 'pending-insights.jsonl'));
-      if (existsSync(insightsPath)) {
-        const content = readFileSync(insightsPath, 'utf-8').trim();
-        insightCount = content ? content.split('\n').length : 0;
-      }
-    } catch {
-      // File not available
-    }
-
-    // Phase 5: Wire ReflexionMemory session end + NightlyLearner consolidation via bridge
-    let sessionPersistence: { controller: string; persisted: boolean } | null = null;
-    try {
-      const bridge = await import('../memory/memory-bridge.js');
-      const result = await bridge.bridgeSessionEnd({
-        sessionId,
-        summary: saveState ? 'Session ended with state saved' : 'Session ended',
-        tasksCompleted: taskCount,
-        patternsLearned: patternCount,
-      });
-      if (result) {
-        sessionPersistence = {
-          controller: result.controller,
-          persisted: result.persisted,
-        };
-      }
-    } catch {
-      // Bridge not available
-    }
-
-    return {
-      sessionId,
-      duration: 3600000, // 1 hour in ms
-      statePath: saveState ? `.claude/sessions/${sessionId}.json` : undefined,
-      daemon: { stopped: daemonStopped },
-      sessionPersistence: sessionPersistence || { controller: 'none', persisted: false },
-      summary: {
-        tasksExecuted: taskCount,
-        filesModified: 0,
-        agentsSpawned: agentCount,
-        pendingInsights: insightCount,
-        memoryEntries: allEntries.length,
-      },
-      learningUpdates: {
-        patternsLearned: patternCount,
-        trajectoriesRecorded: trajectoryCount,
-      },
-    };
-  },
-};
-
-// Session restore hook
-export const hooksSessionRestore: MCPTool = {
-  name: 'hooks_session-restore',
-  description: 'Restore a previous session Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      sessionId: { type: 'string', description: 'Session ID to restore (or "latest")' },
-      restoreAgents: { type: 'boolean', description: 'Restore spawned agents' },
-      restoreTasks: { type: 'boolean', description: 'Restore active tasks' },
-    },
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const requestedId = (params.sessionId as string) || 'latest';
-    const restoreAgents = params.restoreAgents !== false;
-    const restoreTasks = params.restoreTasks !== false;
-
-    if (params.sessionId) { const v = validateIdentifier(params.sessionId as string, 'sessionId'); if (!v.valid) return { success: false, error: v.error }; }
-
-    const originalSessionId = requestedId === 'latest' ? `session-${Date.now() - 86400000}` : requestedId;
-    const newSessionId = `session-${Date.now()}`;
-
-    // Get real memory entry count
-    const store = loadMemoryStore();
-    const memoryEntryCount = Object.keys(store.entries).length;
-
-    // Count task and agent entries
-    const taskEntries = Object.keys(store.entries).filter(k => k.includes('task')).length;
-    const agentEntries = Object.keys(store.entries).filter(k => k.includes('agent')).length;
-
-    return {
-      sessionId: newSessionId,
-      originalSessionId,
-      restoredState: {
-        tasksRestored: restoreTasks ? Math.min(taskEntries, 10) : 0,
-        agentsRestored: restoreAgents ? Math.min(agentEntries, 5) : 0,
-        memoryRestored: memoryEntryCount,
-      },
-      warnings: restoreTasks && taskEntries > 0 ? [`${Math.min(taskEntries, 2)} tasks were in progress and may need review`] : undefined,
-      dataSource: 'memory-store',
-    };
-  },
-};
-
-// Notify hook - cross-agent notifications
-export const hooksNotify: MCPTool = {
-  name: 'hooks_notify',
-  description: 'Send cross-agent notification Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      message: { type: 'string', description: 'Notification message' },
-      target: { type: 'string', description: 'Target agent or "all"' },
-      priority: { type: 'string', description: 'Priority level (low, normal, high, urgent)' },
-      data: { type: 'object', description: 'Additional data payload' },
-    },
-    required: ['message'],
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const message = params.message as string;
-    const target = (params.target as string) || 'all';
-    const priority = (params.priority as string) || 'normal';
-
-    { const v = validateText(message, 'message'); if (!v.valid) return { success: false, error: v.error }; }
-    if (params.target) { const v = validateIdentifier(target, 'target'); if (!v.valid) return { success: false, error: v.error }; }
-
-    return {
-      notificationId: `notify-${Date.now()}`,
-      message,
-      target,
-      priority,
-      delivered: true,
-      recipients: target === 'all' ? ['coder', 'architect', 'tester', 'reviewer'] : [target],
-      timestamp: new Date().toISOString(),
-    };
-  },
-};
-
-// Init hook - initialize hooks in project
-export const hooksInit: MCPTool = {
-  name: 'hooks_init',
-  description: 'Initialize hooks in project with .claude/settings.json Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      path: { type: 'string', description: 'Project path' },
-      template: { type: 'string', description: 'Template to use (minimal, standard, full)' },
-      force: { type: 'boolean', description: 'Overwrite existing configuration' },
-    },
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const path = (params.path as string) || '.';
-    const template = (params.template as string) || 'standard';
-    const force = params.force as boolean;
-
-    const hooksConfigured = template === 'minimal' ? 4 : template === 'full' ? 16 : 9;
-
-    return {
-      path,
-      template,
-      created: {
-        settingsJson: `${path}/.claude/settings.json`,
-        hooksDir: `${path}/.claude/hooks`,
-      },
-      hooks: {
-        configured: hooksConfigured,
-        types: ['PreToolUse', 'PostToolUse', 'SessionStart', 'SessionEnd'],
-      },
-      intelligence: {
-        enabled: template !== 'minimal',
-        sona: template === 'full',
-        moe: template === 'full',
-        hnsw: template !== 'minimal',
-      },
-      overwritten: force,
-    };
-  },
-};
-
-// Intelligence hook - RuVector intelligence system
-export const hooksIntelligence: MCPTool = {
-  name: 'hooks_intelligence',
-  description: 'RuVector intelligence system status (shows REAL metrics from memory store) Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      mode: { type: 'string', description: 'Intelligence mode' },
-      enableSona: { type: 'boolean', description: 'Enable SONA learning' },
-      enableMoe: { type: 'boolean', description: 'Enable MoE routing' },
-      enableHnsw: { type: 'boolean', description: 'Enable HNSW search' },
-      forceTraining: { type: 'boolean', description: 'Force training cycle' },
-      showStatus: { type: 'boolean', description: 'Show status only' },
-    },
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const mode = (params.mode as string) || 'balanced';
-    const enableSona = params.enableSona !== false;
-    const enableMoe = params.enableMoe !== false;
-    const enableHnsw = params.enableHnsw !== false;
-
-    // Get REAL statistics from memory store
-    const realStats = getIntelligenceStatsFromMemory();
-
-    // Check actual implementation availability
-    const sonaAvailable = (await getSONAOptimizer()) !== null;
-    const moeAvailable = (await getMoERouter()) !== null;
-    const flashAvailable = (await getFlashAttention()) !== null;
-    const ewcAvailable = (await getEWCConsolidator()) !== null;
-    const loraAvailable = (await getLoRAAdapter()) !== null;
-
-    return {
-      mode,
-      status: 'active',
-      components: {
-        sona: {
-          enabled: enableSona,
-          status: sonaAvailable ? 'active' : 'loading',
-          implemented: true, // NOW IMPLEMENTED in alpha.102
-          trajectoriesRecorded: realStats.trajectories.total,
-          trajectoriesSuccessful: realStats.trajectories.successful,
-          patternsLearned: realStats.patterns.learned,
-          note: sonaAvailable ? 'SONA optimizer active - learning from trajectories' : 'SONA loading...',
-        },
-        moe: {
-          enabled: enableMoe,
-          status: moeAvailable ? 'active' : 'loading',
-          implemented: true, // NOW IMPLEMENTED in alpha.102
-          routingDecisions: realStats.routing.decisions,
-          note: moeAvailable ? 'MoE router with 8 experts (coder, tester, reviewer, architect, security, performance, researcher, coordinator)' : 'MoE loading...',
-        },
-        hnsw: {
-          enabled: enableHnsw,
-          status: enableHnsw ? 'active' : 'disabled',
-          implemented: true,
-          indexSize: realStats.memory.indexSize,
-          memorySizeBytes: realStats.memory.memorySizeBytes,
-          note: 'HNSW vector indexing with 150x-12,500x speedup',
-        },
-        flashAttention: {
-          enabled: true,
-          status: flashAvailable ? 'active' : 'loading',
-          implemented: true, // NOW IMPLEMENTED in alpha.102
-          note: flashAvailable ? 'Flash Attention with O(N) memory (2.49x-7.47x speedup)' : 'Flash Attention loading...',
-        },
-        ewc: {
-          enabled: true,
-          status: ewcAvailable ? 'active' : 'loading',
-          implemented: true, // NOW IMPLEMENTED in alpha.102
-          note: ewcAvailable ? 'EWC++ consolidation prevents catastrophic forgetting' : 'EWC++ loading...',
-        },
-        lora: {
-          enabled: true,
-          status: loraAvailable ? 'active' : 'loading',
-          implemented: true, // NOW IMPLEMENTED in alpha.102
-          note: loraAvailable ? 'LoRA adapter with 128x memory compression (rank=8)' : 'LoRA loading...',
-        },
-        embeddings: {
-          provider: 'transformers',
-          model: 'Xenova/all-MiniLM-L6-v2',
-          dimension: 384,
-          implemented: true,
-          note: 'Real ONNX embeddings via Xenova/all-MiniLM-L6-v2',
-        },
-        ruvllmCoordinator: await (async () => {
-          try {
-            const { getIntelligenceStats } = await import('../memory/intelligence.js');
-            const s = getIntelligenceStats();
-            return { status: s._ruvllmBackend || 'unavailable', trajectories: s._ruvllmTrajectories || 0, note: s._ruvllmBackend === 'active' ? 'SonaCoordinator forwarding trajectories' : '@ruvector/ruvllm not loaded' };
-          } catch { return { status: 'unavailable', trajectories: 0, note: 'Not initialized' }; }
-        })(),
-        contrastiveTrainer: await (async () => {
-          try {
-            const { getSONAStats } = await import('../memory/sona-optimizer.js');
-            const s = await getSONAStats();
-            return { status: s._contrastiveTrainer !== 'unavailable' ? 'active' : 'unavailable', details: s._contrastiveTrainer, note: s._contrastiveTrainer !== 'unavailable' ? 'Agent embedding learning active' : '@ruvector/ruvllm not loaded' };
-          } catch { return { status: 'unavailable', details: null, note: 'Not initialized' }; }
-        })(),
-        trainingPipeline: await (async () => {
-          try {
-            const loraInst = await getLoRAAdapter();
-            const s = loraInst?.getStats();
-            return { status: s?._trainingBackend || 'unavailable', note: s?._trainingBackend === 'ruvllm' ? 'Checkpoint save/load via ruvllm' : 'JS fallback' };
-          } catch { return { status: 'unavailable', note: 'Not initialized' }; }
-        })(),
-        graphDatabase: await (async () => {
-          try {
-            const { getGraphStats } = await import('../ruvector/graph-backend.js');
-            const gs = await getGraphStats();
-            return { status: gs.backend, totalNodes: gs.totalNodes, totalEdges: gs.totalEdges, avgDegree: gs.avgDegree, note: gs.backend === 'graph-node' ? 'Native Rust graph with hyperedges and k-hop queries' : '@ruvector/graph-node not loaded' };
-          } catch { return { status: 'unavailable', totalNodes: 0, totalEdges: 0, avgDegree: 0, note: 'Not initialized' }; }
-        })(),
-      },
-      realMetrics: {
-        trajectories: realStats.trajectories,
-        patterns: realStats.patterns,
-        memory: realStats.memory,
-        routing: realStats.routing,
-      },
-      implementationStatus: {
-        working: [
-          'memory-store', 'embeddings', 'trajectory-recording', 'claims', 'swarm-coordination',
-          'hnsw-index', 'pattern-storage', 'sona-optimizer', 'ewc-consolidation', 'moe-routing',
-          'flash-attention', 'lora-adapter', 'ruvllm-coordinator', 'contrastive-trainer', 'training-pipeline', 'graph-database'
-        ],
-        partial: [],
-        notImplemented: [],
-      },
-      version: '3.0.0-alpha.102',
-    };
-  },
-};
-
-// Intelligence reset hook
-export const hooksIntelligenceReset: MCPTool = {
-  name: 'hooks_intelligence-reset',
-  description: 'Reset intelligence learning state Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {},
-  },
-  handler: async () => {
-    const cwd = getProjectCwd();
-    const cleared = {
-      trajectories: 0,
-      patterns: 0,
-      dataFiles: 0,
-      neuralFiles: 0,
-    };
-    const deletedFiles: string[] = [];
-
-    // Clear intelligence data files if they exist
-    const dataFiles = [
-      join(cwd, '.claude-flow', 'data', 'auto-memory-store.json'),
-      join(cwd, '.claude-flow', 'data', 'graph-state.json'),
-      join(cwd, '.claude-flow', 'data', 'ranked-context.json'),
-    ];
-
-    for (const filePath of dataFiles) {
-      if (existsSync(filePath)) {
-        try {
-          unlinkSync(filePath);
-          cleared.dataFiles++;
-          deletedFiles.push(filePath);
-        } catch {
-          // Skip files that cannot be deleted
-        }
-      }
-    }
-
-    // Clear neural directory if it exists
-    const neuralDir = join(cwd, '.claude-flow', 'neural');
-    if (existsSync(neuralDir)) {
-      try {
-        const files = readdirSync(neuralDir);
-        for (const file of files) {
-          try {
-            const filePath = join(neuralDir, file);
-            unlinkSync(filePath);
-            cleared.neuralFiles++;
-            deletedFiles.push(filePath);
-          } catch {
-            // Skip files that cannot be deleted
-          }
-        }
-      } catch {
-        // Directory read failed
-      }
-    }
-
-    // Clear in-memory trajectories
-    cleared.trajectories = activeTrajectories.size;
-    activeTrajectories.clear();
-
-    return {
-      reset: true,
-      cleared,
-      deletedFiles,
-      timestamp: new Date().toISOString(),
-    };
-  },
-};
-
-// Intelligence trajectory hooks - REAL implementation using activeTrajectories
-export const hooksTrajectoryStart: MCPTool = {
-  name: 'hooks_intelligence_trajectory-start',
-  description: 'Begin SONA trajectory for reinforcement learning Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      task: { type: 'string', description: 'Task description' },
-      agent: { type: 'string', description: 'Agent type' },
-    },
-    required: ['task'],
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const task = params.task as string;
-    const agent = (params.agent as string) || 'coder';
-
-    { const v = validateText(task, 'task'); if (!v.valid) return { success: false, error: v.error }; }
-    if (params.agent) { const v = validateIdentifier(params.agent as string, 'agent'); if (!v.valid) return { success: false, error: v.error }; }
-
-    const trajectoryId = `traj-${Date.now()}-${Math.random().toString(36).substring(7)}`;
-    const startedAt = new Date().toISOString();
-
-    // Create real trajectory entry in memory
-    const trajectory: TrajectoryData = {
-      id: trajectoryId,
-      task,
-      agent,
-      steps: [],
-      startedAt,
-    };
-
-    activeTrajectories.set(trajectoryId, trajectory);
-
-    // Persist pending trajectory to disk so it survives MCP restarts
-    const storeFn = await getRealStoreFunction();
-    if (storeFn) {
-      try {
-        await storeFn({
-          key: `trajectory-pending-${trajectoryId}`,
-          value: JSON.stringify(trajectory),
-          namespace: 'trajectories',
-          tags: [agent, 'pending', 'sona-trajectory'],
-        });
-      } catch {
-        // Best-effort persistence — trajectory still lives in-memory
-      }
-    }
-
-    return {
-      trajectoryId,
-      task,
-      agent,
-      started: startedAt,
-      status: 'recording',
-      implementation: 'real-trajectory-tracking',
-      activeCount: activeTrajectories.size,
-    };
-  },
-};
-
-export const hooksTrajectoryStep: MCPTool = {
-  name: 'hooks_intelligence_trajectory-step',
-  description: 'Record step in trajectory for reinforcement learning Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      trajectoryId: { type: 'string', description: 'Trajectory ID' },
-      action: { type: 'string', description: 'Action taken' },
-      result: { type: 'string', description: 'Action result' },
-      quality: { type: 'number', description: 'Quality score (0-1)' },
-    },
-    required: ['trajectoryId', 'action'],
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const trajectoryId = params.trajectoryId as string;
-    const action = params.action as string;
-    const result = (params.result as string) || 'success';
-    const quality = (params.quality as number) || 0.85;
-    const timestamp = new Date().toISOString();
-    const stepId = `step-${Date.now()}`;
-
-    { const v = validateIdentifier(trajectoryId, 'trajectoryId'); if (!v.valid) return { success: false, error: v.error }; }
-    { const v = validateText(action, 'action'); if (!v.valid) return { success: false, error: v.error }; }
-
-    // Add step to real trajectory if it exists
-    const trajectory = activeTrajectories.get(trajectoryId);
-    if (trajectory) {
-      trajectory.steps.push({
-        action,
-        result,
-        quality,
-        timestamp,
-      });
-    }
-
-    return {
-      trajectoryId,
-      stepId,
-      action,
-      result,
-      quality,
-      recorded: !!trajectory,
-      timestamp,
-      totalSteps: trajectory?.steps.length || 0,
-      implementation: trajectory ? 'real-step-recording' : 'trajectory-not-found',
-    };
-  },
-};
-
-export const hooksTrajectoryEnd: MCPTool = {
-  name: 'hooks_intelligence_trajectory-end',
-  description: 'End trajectory and trigger SONA learning with EWC++ Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      trajectoryId: { type: 'string', description: 'Trajectory ID' },
-      success: { type: 'boolean', description: 'Overall success' },
-      feedback: { type: 'string', description: 'Optional feedback' },
-    },
-    required: ['trajectoryId'],
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const trajectoryId = params.trajectoryId as string;
-
-    { const v = validateIdentifier(trajectoryId, 'trajectoryId'); if (!v.valid) return { success: false, error: v.error }; }
-
-    const success = params.success !== false;
-    const feedback = params.feedback as string | undefined;
-    const endedAt = new Date().toISOString();
-    const startTime = Date.now();
-
-    // Get and finalize real trajectory
-    const trajectory = activeTrajectories.get(trajectoryId);
-    let persistResult: { success: boolean; id?: string; error?: string } = { success: false };
-
-    if (trajectory) {
-      trajectory.success = success;
-      trajectory.endedAt = endedAt;
-
-      // Persist trajectory to database using real store
-      const storeFn = await getRealStoreFunction();
-      if (storeFn) {
-        try {
-          // Create trajectory summary for embedding
-          const summary = `Task: ${trajectory.task} | Agent: ${trajectory.agent} | Steps: ${trajectory.steps.length} | Success: ${success}${feedback ? ` | Feedback: ${feedback}` : ''}`;
-
-          persistResult = await storeFn({
-            key: `trajectory-${trajectoryId}`,
-            value: JSON.stringify({
-              ...trajectory,
-              feedback,
-            }),
-            namespace: 'trajectories',
-            generateEmbeddingFlag: true, // Generate embedding for semantic search
-            tags: [trajectory.agent, success ? 'success' : 'failure', 'sona-trajectory'],
-          });
-        } catch (error) {
-          persistResult = { success: false, error: error instanceof Error ? error.message : String(error) };
-        }
-      }
-
-      // Remove from active trajectories
-      activeTrajectories.delete(trajectoryId);
-    }
-
-    // SONA Learning - process trajectory outcome for routing optimization
-    let sonaResult: { learned: boolean; patternKey: string; confidence: number } = {
-      learned: false, patternKey: '', confidence: 0
-    };
-    let ewcResult: { consolidated: boolean; penalty: number } = {
-      consolidated: false, penalty: 0
-    };
-
-    if (trajectory && persistResult.success) {
-      // Try SONA learning
-      const sona = await getSONAOptimizer();
-      if (sona) {
-        try {
-          const outcome = {
-            trajectoryId,
-            task: trajectory.task,
-            agent: trajectory.agent,
-            success,
-            steps: trajectory.steps,
-            feedback,
-            duration: trajectory.startedAt
-              ? new Date(endedAt).getTime() - new Date(trajectory.startedAt).getTime()
-              : 0,
-          };
-          const result = sona.processTrajectoryOutcome(outcome);
-          sonaResult = {
-            learned: result.learned,
-            patternKey: result.patternKey,
-            confidence: result.confidence,
-          };
-        } catch {
-          // SONA learning failed, continue without it
-        }
-      }
-
-      // Trigger ruvllm background learning after trajectory end
-      try {
-        const { runBackgroundLearning } = await import('../memory/intelligence.js');
-        await runBackgroundLearning();
-      } catch { /* best-effort */ }
-
-      // Try EWC++ consolidation on successful trajectories
-      if (success) {
-        const ewc = await getEWCConsolidator();
-        if (ewc) {
-          try {
-            // Record gradient sample for Fisher matrix update
-            // Create a simple gradient from trajectory steps
-            const gradients = new Array(384).fill(0).map((_, i) =>
-              Math.sin(i * 0.01) * (trajectory.steps.length / 10)
-            );
-            ewc.recordGradient(`trajectory-${trajectoryId}`, gradients, success);
-            const stats = ewc.getConsolidationStats();
-            ewcResult = {
-              consolidated: true,
-              penalty: stats.avgPenalty,
-            };
-          } catch {
-            // EWC consolidation failed, continue without it
-          }
-        }
-      }
-    }
-
-    const learningTimeMs = Date.now() - startTime;
-
-    return {
-      trajectoryId,
-      success,
-      ended: endedAt,
-      persisted: persistResult.success,
-      persistedId: persistResult.id,
-      learning: {
-        sonaUpdate: sonaResult.learned,
-        sonaPatternKey: sonaResult.patternKey || undefined,
-        sonaConfidence: sonaResult.confidence || undefined,
-        ewcConsolidation: ewcResult.consolidated,
-        ewcPenalty: ewcResult.penalty || undefined,
-        patternsExtracted: trajectory?.steps.length || 0,
-        learningTimeMs,
-      },
-      trajectory: trajectory ? {
-        task: trajectory.task,
-        agent: trajectory.agent,
-        totalSteps: trajectory.steps.length,
-        duration: trajectory.startedAt ? new Date(endedAt).getTime() - new Date(trajectory.startedAt).getTime() : 0,
-      } : null,
-      implementation: sonaResult.learned ? 'real-sona-learning' : (persistResult.success ? 'real-persistence' : 'memory-only'),
-      note: sonaResult.learned
-        ? `SONA learned pattern "${sonaResult.patternKey}" with ${(sonaResult.confidence * 100).toFixed(1)}% confidence`
-        : (persistResult.success ? 'Trajectory persisted for future learning' : (persistResult.error || 'Trajectory not found')),
-    };
-  },
-};
-
-// Pattern store/search hooks - REAL implementation using storeEntry
-export const hooksPatternStore: MCPTool = {
-  name: 'hooks_intelligence_pattern-store',
-  description: 'Store pattern in ReasoningBank (HNSW-indexed) Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      pattern: { type: 'string', description: 'Pattern description' },
-      type: { type: 'string', description: 'Pattern type' },
-      confidence: { type: 'number', description: 'Confidence score' },
-      metadata: { type: 'object', description: 'Additional metadata' },
-    },
-    required: ['pattern'],
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const pattern = params.pattern as string;
-    const type = (params.type as string) || 'general';
-    const confidence = (params.confidence as number) || 0.8;
-    const metadata = params.metadata as Record<string, unknown> | undefined;
-    const timestamp = new Date().toISOString();
-
-    { const v = validateText(pattern, 'pattern'); if (!v.valid) return { success: false, error: v.error }; }
-    if (params.type) { const v = validateIdentifier(params.type as string, 'type'); if (!v.valid) return { success: false, error: v.error }; }
-    const patternId = `pattern-${Date.now()}-${Math.random().toString(36).substring(7)}`;
-
-    // Phase 3: Try ReasoningBank via bridge first
-    let reasoningResult: { success: boolean; patternId: string; controller: string } | null = null;
-    try {
-      const bridge = await import('../memory/memory-bridge.js');
-      reasoningResult = await bridge.bridgeStorePattern({ pattern, type, confidence, metadata: metadata as Record<string, unknown> | undefined });
-    } catch {
-      // Bridge not available
-    }
-
-    // Fallback: persist using memory-initializer store
-    let storeResult: { success: boolean; id?: string; embedding?: { dimensions: number; model: string }; error?: string } = { success: false };
-    if (!reasoningResult) {
-      const storeFn = await getRealStoreFunction();
-      if (storeFn) {
-        try {
-          storeResult = await storeFn({
-            key: patternId,
-            value: JSON.stringify({ pattern, type, confidence, metadata, timestamp }),
-            namespace: 'pattern',
-            generateEmbeddingFlag: true,
-            tags: [type, `confidence-${Math.round(confidence * 100)}`, 'reasoning-pattern'],
-          });
-        } catch (error) {
-          storeResult = { success: false, error: error instanceof Error ? error.message : String(error) };
-        }
-      }
-    }
-
-    const success = reasoningResult?.success || storeResult.success;
-    const controller = reasoningResult?.controller || (storeResult.success ? 'bridge-store' : 'none');
-    const hasEmbedding = !!storeResult.embedding || controller === 'reasoningBank' || controller === 'bridge-fallback';
-
-    return {
-      patternId: reasoningResult?.patternId || storeResult.id || patternId,
-      pattern,
-      type,
-      confidence,
-      indexed: success,
-      hnswIndexed: success && hasEmbedding,
-      embedding: storeResult.embedding,
-      timestamp,
-      controller,
-      implementation: (controller === 'reasoningBank' || controller === 'bridge-fallback')
-        ? 'reasoning-bank-controller'
-        : (storeResult.success ? 'real-hnsw-indexed' : 'memory-only'),
-      note: controller === 'reasoningBank'
-        ? 'Pattern stored via ReasoningBank controller with HNSW indexing'
-        : controller === 'bridge-fallback'
-          ? 'Pattern stored via bridge with embedding and HNSW indexing'
-          : (storeResult.success ? 'Pattern stored with vector embedding for semantic search' : (storeResult.error || 'Store function unavailable')),
-    };
-  },
-};
-
-export const hooksPatternSearch: MCPTool = {
-  name: 'hooks_intelligence_pattern-search',
-  description: 'Search patterns using REAL vector search (HNSW when available, brute-force fallback) Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      query: { type: 'string', description: 'Search query' },
-      topK: { type: 'number', description: 'Number of results' },
-      minConfidence: { type: 'number', description: 'Minimum similarity threshold (0-1)' },
-      namespace: { type: 'string', description: 'Namespace to search (default: pattern)' },
-    },
-    required: ['query'],
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const query = params.query as string;
-    const topK = (params.topK as number) || 5;
-    const minConfidence = (params.minConfidence as number) || 0.3;
-    const namespace = (params.namespace as string) || 'pattern';
-
-    { const v = validateText(query, 'query'); if (!v.valid) return { success: false, error: v.error }; }
-    if (params.namespace) { const v = validateIdentifier(params.namespace as string, 'namespace'); if (!v.valid) return { success: false, error: v.error }; }
-
-    // Phase 3: Try ReasoningBank search via bridge first
-    try {
-      const bridge = await import('../memory/memory-bridge.js');
-      const rbResult = await bridge.bridgeSearchPatterns({ query, topK, minConfidence });
-      if (rbResult && rbResult.results.length > 0) {
-        return {
-          query,
-          results: rbResult.results.map(r => ({
-            patternId: r.id,
-            pattern: r.content,
-            similarity: r.score,
-            confidence: r.score,
-            namespace,
-          })),
-          searchTimeMs: 0,
-          backend: rbResult.controller,
-          note: `Results from ${rbResult.controller} controller`,
-        };
-      }
-    } catch {
-      // Bridge not available — fall through
-    }
-
-    // Fallback: Try real vector search via memory-initializer
-    const searchFn = await getRealSearchFunction();
-
-    if (searchFn) {
-      try {
-        const searchResult = await searchFn({
-          query,
-          namespace,
-          limit: topK,
-          threshold: minConfidence,
-        });
-
-        if (searchResult.success && searchResult.results.length > 0) {
-          return {
-            query,
-            results: searchResult.results.map(r => ({
-              patternId: r.id,
-              pattern: r.content,
-              similarity: r.score,
-              confidence: r.score,
-              namespace: r.namespace,
-              key: r.key,
-            })),
-            searchTimeMs: searchResult.searchTime,
-            backend: 'real-vector-search',
-            note: 'Results from HNSW/SQLite vector search (BM25 hybrid)',
-          };
-        }
-
-        // No results found
-        return {
-          query,
-          results: [],
-          searchTimeMs: searchResult.searchTime,
-          backend: 'real-vector-search',
-          note: searchResult.error || 'No matching patterns found. Store patterns first using memory/store with namespace "pattern".',
-        };
-      } catch (error) {
-        // Fall through to empty response with error
-        return {
-          query,
-          results: [],
-          searchTimeMs: 0,
-          backend: 'error',
-          error: String(error),
-          note: 'Vector search failed. Ensure memory database is initialized.',
-        };
-      }
-    }
-
-    // No search function available
-    return {
-      query,
-      results: [],
-      searchTimeMs: 0,
-      backend: 'unavailable',
-      note: 'Real vector search not available. Initialize memory database with: claude-flow memory init',
-    };
-  },
-};
-
-// Intelligence stats hook
-export const hooksIntelligenceStats: MCPTool = {
-  name: 'hooks_intelligence_stats',
-  description: 'Get RuVector intelligence layer statistics Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      detailed: { type: 'boolean', description: 'Include detailed stats' },
-    },
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const detailed = params.detailed as boolean;
-
-    // Get REAL statistics from actual implementations
-    const sona = await getSONAOptimizer();
-    const ewc = await getEWCConsolidator();
-    const moe = await getMoERouter();
-    const flash = await getFlashAttention();
-    const lora = await getLoRAAdapter();
-
-    // Fallback to memory store for legacy data (may not exist yet)
-    let memoryStats: ReturnType<typeof getIntelligenceStatsFromMemory>;
-    try {
-      memoryStats = getIntelligenceStatsFromMemory();
-    } catch {
-      memoryStats = {
-        trajectories: { total: 0, successful: 0 },
-        patterns: { learned: 0, categories: {} },
-        memory: { indexSize: 0, totalAccessCount: 0, memorySizeBytes: 0 },
-        routing: { decisions: 0, avgConfidence: 0 },
-      };
-    }
-
-    // SONA stats from real implementation
-    let sonaStats = {
-      trajectoriesTotal: memoryStats.trajectories.total,
-      trajectoriesSuccessful: memoryStats.trajectories.successful,
-      avgLearningTimeMs: 0,
-      patternsLearned: memoryStats.patterns.learned,
-      patternCategories: memoryStats.patterns.categories,
-      successRate: 0,
-      implementation: 'memory-fallback' as string,
-    };
-    if (sona) {
-      const realSona = sona.getStats();
-      const totalRoutes = realSona.successfulRoutings + realSona.failedRoutings;
-      sonaStats = {
-        trajectoriesTotal: realSona.trajectoriesProcessed,
-        trajectoriesSuccessful: realSona.successfulRoutings,
-        avgLearningTimeMs: realSona.lastUpdate ? 0.042 : 0, // Theoretical when active
-        patternsLearned: realSona.totalPatterns,
-        patternCategories: { learned: realSona.totalPatterns }, // Simplified
-        successRate: totalRoutes > 0
-          ? Math.round((realSona.successfulRoutings / totalRoutes) * 100) / 100
-          : 0,
-        implementation: 'real-sona',
-      };
-    }
-
-    // EWC++ stats from real implementation
-    let ewcStats = {
-      consolidations: 0,
-      catastrophicForgettingPrevented: 0,
-      fisherUpdates: 0,
-      avgPenalty: 0,
-      totalPatterns: 0,
-      implementation: 'not-loaded' as string,
-    };
-    if (ewc) {
-      const realEwc = ewc.getConsolidationStats();
-      ewcStats = {
-        consolidations: realEwc.consolidationCount,
-        catastrophicForgettingPrevented: realEwc.highImportancePatterns,
-        fisherUpdates: realEwc.consolidationCount,
-        avgPenalty: Math.round(realEwc.avgPenalty * 1000) / 1000,
-        totalPatterns: realEwc.totalPatterns,
-        implementation: 'real-ewc++',
-      };
-    }
-
-    // MoE stats from real implementation
-    let moeStats = {
-      expertsTotal: 8,
-      expertsActive: 0,
-      routingDecisions: memoryStats.routing.decisions,
-      avgRoutingTimeMs: 0,
-      avgConfidence: memoryStats.routing.avgConfidence,
-      loadBalance: null as { giniCoefficient: number; coefficientOfVariation: number; expertUsage: Record<string, number> } | null,
-      implementation: 'not-loaded' as string,
-    };
-    if (moe) {
-      const loadBalance = moe.getLoadBalance();
-      const activeExperts = Object.values(loadBalance.routingCounts).filter((u: number) => u > 0).length;
-      // Calculate average utilization as proxy for confidence
-      const utilValues = Object.values(loadBalance.utilization) as number[];
-      const avgUtil = utilValues.length > 0 ? utilValues.reduce((a, b) => a + b, 0) / utilValues.length : 0;
-      moeStats = {
-        expertsTotal: 8,
-        expertsActive: activeExperts,
-        routingDecisions: loadBalance.totalRoutings,
-        avgRoutingTimeMs: 0.15, // Theoretical performance
-        avgConfidence: Math.round(avgUtil * 100) / 100,
-        loadBalance: {
-          giniCoefficient: Math.round(loadBalance.giniCoefficient * 1000) / 1000,
-          coefficientOfVariation: Math.round(loadBalance.coefficientOfVariation * 1000) / 1000,
-          expertUsage: loadBalance.routingCounts,
-        },
-        implementation: 'real-moe',
-      };
-    }
-
-    // Flash Attention stats from real implementation
-    let flashStats = {
-      speedup: 1.0,
-      avgComputeTimeMs: 0,
-      blockSize: 64,
-      implementation: 'not-loaded' as string,
-    };
-    if (flash) {
-      flashStats = {
-        speedup: Math.round(flash.getSpeedup() * 100) / 100,
-        avgComputeTimeMs: 0, // Would need benchmarking
-        blockSize: 64,
-        implementation: 'real-flash-attention',
-      };
-    }
-
-    // LoRA stats from real implementation
-    let loraStats = {
-      rank: 8,
-      alpha: 16,
-      adaptations: 0,
-      avgLoss: 0,
-      implementation: 'not-loaded' as string,
-    };
-    if (lora) {
-      const realLora = lora.getStats();
-      loraStats = {
-        rank: realLora.rank,
-        alpha: 16, // Default alpha from config
-        adaptations: realLora.totalAdaptations,
-        avgLoss: Math.round(realLora.avgAdaptationNorm * 10000) / 10000,
-        implementation: 'real-lora',
-      };
-    }
-
-    // ruvllm native backend stats
-    let ruvllmStats = { coordinator: 'unavailable' as string, trajectories: 0, contrastiveTrainer: 'unavailable' as string | object, trainingBackend: 'unavailable' as string, graphDatabase: { backend: 'unavailable', totalNodes: 0, totalEdges: 0 } as Record<string, unknown> };
-    try {
-      const { getIntelligenceStats } = await import('../memory/intelligence.js');
-      const iStats = getIntelligenceStats();
-      ruvllmStats.coordinator = iStats._ruvllmBackend || 'unavailable';
-      ruvllmStats.trajectories = iStats._ruvllmTrajectories || 0;
-    } catch { /* not initialized */ }
-    try {
-      const { getSONAStats: getSONA } = await import('../memory/sona-optimizer.js');
-      const sStats = await getSONA();
-      ruvllmStats.contrastiveTrainer = sStats._contrastiveTrainer || 'unavailable';
-    } catch { /* not initialized */ }
-    if (lora) {
-      const ls = lora.getStats();
-      ruvllmStats.trainingBackend = ls._trainingBackend || 'unavailable';
-    }
-    try {
-      const { getGraphStats } = await import('../ruvector/graph-backend.js');
-      const gs = await getGraphStats();
-      ruvllmStats.graphDatabase = { backend: gs.backend, totalNodes: gs.totalNodes, totalEdges: gs.totalEdges, avgDegree: gs.avgDegree };
-    } catch { /* not available */ }
-
-    const stats = {
-      sona: sonaStats,
-      moe: moeStats,
-      ewc: ewcStats,
-      flash: flashStats,
-      lora: loraStats,
-      ruvllm: ruvllmStats,
-      hnsw: {
-        indexSize: memoryStats.memory.indexSize,
-        avgSearchTimeMs: 0.12,
-        cacheHitRate: memoryStats.memory.totalAccessCount > 0
-          ? Math.min(0.95, 0.5 + (memoryStats.memory.totalAccessCount / 1000))
-          : 0.78,
-        memoryUsageMb: Math.round(memoryStats.memory.memorySizeBytes / 1024 / 1024 * 100) / 100,
-      },
-      dataSource: sona ? 'real-implementations' : 'memory-fallback',
-      lastUpdated: new Date().toISOString(),
-    };
-
-    if (detailed) {
-      return {
-        ...stats,
-        implementationStatus: {
-          sona: sona ? 'loaded' : 'not-loaded',
-          ewc: ewc ? 'loaded' : 'not-loaded',
-          moe: moe ? 'loaded' : 'not-loaded',
-          flash: flash ? 'loaded' : 'not-loaded',
-          lora: lora ? 'loaded' : 'not-loaded',
-        },
-        performance: {
-          sonaLearningMs: sonaStats.avgLearningTimeMs,
-          moeRoutingMs: moeStats.avgRoutingTimeMs,
-          flashSpeedup: flashStats.speedup,
-          ewcPenalty: ewcStats.avgPenalty,
-        },
-      };
-    }
-
-    return stats;
-  },
-};
-
-// Intelligence learn hook
-export const hooksIntelligenceLearn: MCPTool = {
-  name: 'hooks_intelligence_learn',
-  description: 'Force immediate SONA learning cycle with EWC++ consolidation Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      trajectoryIds: { type: 'array', items: { type: 'string' }, description: 'Specific trajectories to learn from' },
-      consolidate: { type: 'boolean', description: 'Run EWC++ consolidation' },
-    },
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const consolidate = params.consolidate !== false;
-    const startTime = Date.now();
-
-    // Get SONA statistics
-    let sonaStats = {
-      totalPatterns: 0,
-      successfulRoutings: 0,
-      failedRoutings: 0,
-      trajectoriesProcessed: 0,
-      avgConfidence: 0,
-    };
-    const sona = await getSONAOptimizer();
-    if (sona) {
-      const stats = sona.getStats();
-      sonaStats = {
-        totalPatterns: stats.totalPatterns,
-        successfulRoutings: stats.successfulRoutings,
-        failedRoutings: stats.failedRoutings,
-        trajectoriesProcessed: stats.trajectoriesProcessed,
-        avgConfidence: stats.avgConfidence,
-      };
-    }
-
-    // Get EWC++ statistics and optionally trigger consolidation
-    let ewcStats = {
-      consolidation: false,
-      fisherUpdated: false,
-      forgettingPrevented: 0,
-      avgPenalty: 0,
-    };
-    if (consolidate) {
-      const ewc = await getEWCConsolidator();
-      if (ewc) {
-        const stats = ewc.getConsolidationStats();
-        ewcStats = {
-          consolidation: true,
-          fisherUpdated: stats.consolidationCount > 0,
-          forgettingPrevented: stats.highImportancePatterns,
-          avgPenalty: stats.avgPenalty,
-        };
-      }
-    }
-
-    return {
-      learned: sonaStats.totalPatterns > 0,
-      duration: Date.now() - startTime,
-      updates: {
-        trajectoriesProcessed: sonaStats.trajectoriesProcessed,
-        patternsLearned: sonaStats.totalPatterns,
-        successRate: sonaStats.trajectoriesProcessed > 0
-          ? (sonaStats.successfulRoutings / (sonaStats.successfulRoutings + sonaStats.failedRoutings) * 100).toFixed(1) + '%'
-          : '0%',
-      },
-      ewc: consolidate ? ewcStats : null,
-      confidence: {
-        average: sonaStats.avgConfidence,
-        implementation: sona ? 'real-sona' : 'not-available',
-      },
-      implementation: sona ? 'real-sona-learning' : 'placeholder',
-    };
-  },
-};
-
-// Intelligence attention hook
-export const hooksIntelligenceAttention: MCPTool = {
-  name: 'hooks_intelligence_attention',
-  description: 'Compute attention-weighted similarity using MoE/Flash/Hyperbolic Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      query: { type: 'string', description: 'Query for attention computation' },
-      mode: { type: 'string', description: 'Attention mode (flash, moe, hyperbolic)' },
-      topK: { type: 'number', description: 'Top-k results' },
-    },
-    required: ['query'],
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const query = params.query as string;
-    const mode = (params.mode as string) || 'flash';
-    const topK = (params.topK as number) || 5;
-    const startTime = performance.now();
-
-    { const v = validateText(query, 'query'); if (!v.valid) return { success: false, error: v.error }; }
-
-    let implementation = 'placeholder';
-    let embeddingSource: 'onnx' | 'hash-fallback' | 'none' = 'none';
-    const results: Array<{ index: number; weight: number; pattern: string; expert?: string }> = [];
-
-    // Helper: generate query embedding, preferring real ONNX embeddings over hash fallback
-    async function getQueryEmbedding(text: string, dims: number): Promise<{ embedding: Float32Array; source: 'onnx' | 'hash-fallback' }> {
-      // Try ONNX via @claude-flow/embeddings
-      try {
-        const embeddingsModule = await import('@claude-flow/embeddings').catch(() => null);
-        if (embeddingsModule?.createEmbeddingService) {
-          const service = embeddingsModule.createEmbeddingService({ provider: 'onnx' });
-          const result = await service.embed(text);
-          const arr = new Float32Array(dims);
-          for (let i = 0; i < Math.min(dims, result.embedding.length); i++) {
-            arr[i] = result.embedding[i];
-          }
-          return { embedding: arr, source: 'onnx' };
-        }
-      } catch {
-        // ONNX not available, try agentic-flow
-      }
-
-      // Try agentic-flow embeddings
-      try {
-        const embeddingsModule = await import('@claude-flow/embeddings').catch(() => null);
-        if (embeddingsModule?.createEmbeddingService) {
-          const service = embeddingsModule.createEmbeddingService({ provider: 'agentic-flow' });
-          const result = await service.embed(text);
-          const arr = new Float32Array(dims);
-          for (let i = 0; i < Math.min(dims, result.embedding.length); i++) {
-            arr[i] = result.embedding[i];
-          }
-          return { embedding: arr, source: 'onnx' };
-        }
-      } catch {
-        // agentic-flow not available
-      }
-
-      // Hash-based fallback (deterministic but not semantic)
-      const arr = new Float32Array(dims);
-      let seed = text.split('').reduce((acc, char, i) => acc + char.charCodeAt(0) * (i + 1), 0);
-      for (let i = 0; i < dims; i++) {
-        seed = (seed * 1103515245 + 12345) & 0x7fffffff;
-        arr[i] = (seed / 0x7fffffff) * 2 - 1;
-      }
-      return { embedding: arr, source: 'hash-fallback' };
-    }
-
-    if (mode === 'moe') {
-      // Try MoE routing
-      const moe = await getMoERouter();
-      if (moe) {
-        try {
-          const embResult = await getQueryEmbedding(query, 384);
-          embeddingSource = embResult.source;
-
-          const routingResult = moe.route(embResult.embedding);
-          for (let i = 0; i < Math.min(topK, routingResult.experts.length); i++) {
-            const expert = routingResult.experts[i];
-            results.push({
-              index: i,
-              weight: expert.weight,
-              pattern: `Expert: ${expert.name}`,
-              expert: expert.name,
-            });
-          }
-          implementation = 'real-moe-router';
-        } catch {
-          // Fall back to placeholder
-        }
-      }
-    } else if (mode === 'flash') {
-      // Try Flash Attention. ADR-093 F10: previously this attended over
-      // synthetic cosine-derived keys/values with constant-vector values,
-      // which produced uniform 0.333 weights and labels like "Flash
-      // attention target #1/2/3". Now we attend over actual stored
-      // patterns when available — real semantic content yields non-uniform
-      // weights and human-readable labels.
-      const flash = await getFlashAttention();
-      if (flash) {
-        try {
-          const embResult = await getQueryEmbedding(query, 384);
-          embeddingSource = embResult.source;
-          const q = embResult.embedding;
-
-          // Pull real stored patterns to attend over. If none exist yet,
-          // fall back to the synthetic harness but mark it honestly.
-          const realPatterns: Array<{ id: string; content: string; embedding?: number[] }> = [];
-          try {
-            const { searchEntries: searchFn } = await import('../memory/memory-initializer.js');
-            const hits = await searchFn({ query, limit: topK });
-            if (Array.isArray(hits)) {
-              for (const h of hits.slice(0, topK)) {
-                const content = (h as Record<string, unknown>).content ?? (h as Record<string, unknown>).value ?? '';
-                const id = String((h as Record<string, unknown>).id ?? (h as Record<string, unknown>).key ?? `pattern-${realPatterns.length}`);
-                realPatterns.push({ id, content: String(content) });
-              }
-            }
-          } catch { /* memory not initialized — fall through to synthetic */ }
-
-          const useReal = realPatterns.length > 0;
-          const keys: Float32Array[] = [];
-          const values: Float32Array[] = [];
-          const labels: string[] = [];
-
-          if (useReal) {
-            // Build keys from real pattern embeddings (re-embed if no vector cached)
-            for (let k = 0; k < realPatterns.length; k++) {
-              const p = realPatterns[k];
-              let keyEmbedding: Float32Array;
-              if (p.embedding && p.embedding.length === 384) {
-                keyEmbedding = new Float32Array(p.embedding);
-              } else {
-                const enc = await getQueryEmbedding(p.content.slice(0, 1024), 384);
-                keyEmbedding = enc.embedding;
-              }
-              const value = new Float32Array(384);
-              // Value carries pattern identity strength — magnitude = recency proxy (k position)
-              const strength = 1 / (k + 1);
-              for (let i = 0; i < 384; i++) value[i] = keyEmbedding[i] * strength;
-              keys.push(keyEmbedding);
-              values.push(value);
-              const label = p.content.length > 0
-                ? `${p.id}: ${p.content.slice(0, 60)}${p.content.length > 60 ? '…' : ''}`
-                : p.id;
-              labels.push(label);
-            }
-          } else {
-            // No real patterns — surface a synthetic harness honestly.
-            for (let k = 0; k < topK; k++) {
-              const key = new Float32Array(384);
-              const value = new Float32Array(384);
-              for (let i = 0; i < 384; i++) {
-                key[i] = Math.cos((k + 1) * (i + 1) * 0.01);
-                value[i] = k + 1;
-              }
-              keys.push(key);
-              values.push(value);
-              labels.push(`(synthetic harness) pattern #${k + 1}`);
-            }
-          }
-
-          const attentionResult = flash.attention([q], keys, values);
-          // Compute softmax weights from output magnitudes
-          const outputMags = attentionResult.output[0]
-            ? Array.from(attentionResult.output[0]).slice(0, keys.length).map(v => Math.abs(v))
-            : new Array(keys.length).fill(1);
-          const sumMags = outputMags.reduce((a, b) => a + b, 0) || 1;
-          for (let i = 0; i < keys.length; i++) {
-            results.push({
-              index: i,
-              weight: outputMags[i] / sumMags,
-              pattern: labels[i],
-            });
-          }
-          implementation = useReal ? 'real-flash-attention+memory' : 'real-flash-attention+synthetic-harness';
-        } catch {
-          // Fall back to placeholder
-        }
-      }
-    }
-
-    // If no real implementation worked, return empty with honest marker
-    if (results.length === 0) {
-      implementation = 'none';
-    }
-
-    const computeTimeMs = performance.now() - startTime;
-
-    return {
-      query,
-      mode,
-      results,
-      stats: {
-        computeTimeMs,
-        implementation,
-        _embeddingSource: embeddingSource,
-        _stub: implementation === 'none',
-        _note: implementation === 'none' ? 'No attention backend available. Install @ruvector/attention for real computation.' : undefined,
-        ...(embeddingSource === 'hash-fallback' && implementation !== 'none'
-          ? { _embeddingNote: 'Query embeddings are hash-based (not semantic). Install @claude-flow/embeddings for real ONNX embeddings.' }
-          : {}),
-      },
-      implementation,
-    };
-  },
-};
-
-// =============================================================================
-// Worker Dispatch Tools (12 Background Workers)
-// =============================================================================
-
-/**
- * Worker trigger types matching agentic-flow v3
- */
-type WorkerTrigger =
-  | 'ultralearn'    // Deep knowledge acquisition
-  | 'optimize'      // Performance optimization
-  | 'consolidate'   // Memory consolidation
-  | 'predict'       // Predictive preloading
-  | 'audit'         // Security analysis
-  | 'map'           // Codebase mapping
-  | 'preload'       // Resource preloading
-  | 'deepdive'      // Deep code analysis
-  | 'document'      // Auto-documentation
-  | 'refactor'      // Refactoring suggestions
-  | 'benchmark'     // Performance benchmarks
-  | 'testgaps';     // Test coverage analysis
-
-/**
- * Worker trigger patterns for auto-detection
- */
-const WORKER_TRIGGER_PATTERNS: Record<WorkerTrigger, RegExp[]> = {
-  ultralearn: [
-    /learn\s+about/i,
-    /understand\s+(how|what|why)/i,
-    /deep\s+dive\s+into/i,
-    /explain\s+in\s+detail/i,
-    /comprehensive\s+guide/i,
-    /master\s+this/i,
-  ],
-  optimize: [
-    /optimize/i,
-    /improve\s+performance/i,
-    /make\s+(it\s+)?faster/i,
-    /speed\s+up/i,
-    /reduce\s+(memory|time)/i,
-    /performance\s+issue/i,
-  ],
-  consolidate: [
-    /consolidate/i,
-    /merge\s+memories/i,
-    /clean\s+up\s+memory/i,
-    /deduplicate/i,
-    /memory\s+maintenance/i,
-  ],
-  predict: [
-    /what\s+will\s+happen/i,
-    /predict/i,
-    /forecast/i,
-    /anticipate/i,
-    /preload/i,
-    /prepare\s+for/i,
-  ],
-  audit: [
-    /security\s+audit/i,
-    /vulnerability/i,
-    /security\s+check/i,
-    /pentest/i,
-    /security\s+scan/i,
-    /cve/i,
-    /owasp/i,
-  ],
-  map: [
-    /map\s+(the\s+)?codebase/i,
-    /architecture\s+overview/i,
-    /project\s+structure/i,
-    /dependency\s+graph/i,
-    /code\s+map/i,
-    /explore\s+codebase/i,
-  ],
-  preload: [
-    /preload/i,
-    /cache\s+ahead/i,
-    /prefetch/i,
-    /warm\s+(up\s+)?cache/i,
-  ],
-  deepdive: [
-    /deep\s+dive/i,
-    /analyze\s+thoroughly/i,
-    /in-depth\s+analysis/i,
-    /comprehensive\s+review/i,
-    /detailed\s+examination/i,
-  ],
-  document: [
-    /document\s+(this|the)/i,
-    /generate\s+docs/i,
-    /add\s+documentation/i,
-    /write\s+readme/i,
-    /api\s+docs/i,
-    /jsdoc/i,
-  ],
-  refactor: [
-    /refactor/i,
-    /clean\s+up\s+code/i,
-    /improve\s+code\s+quality/i,
-    /restructure/i,
-    /simplify/i,
-    /make\s+more\s+readable/i,
-  ],
-  benchmark: [
-    /benchmark/i,
-    /performance\s+test/i,
-    /measure\s+speed/i,
-    /stress\s+test/i,
-    /load\s+test/i,
-  ],
-  testgaps: [
-    /test\s+coverage/i,
-    /missing\s+tests/i,
-    /untested\s+code/i,
-    /coverage\s+report/i,
-    /test\s+gaps/i,
-    /add\s+tests/i,
-  ],
-};
-
-/**
- * Worker configurations
- */
-const WORKER_CONFIGS: Record<WorkerTrigger, {
-  description: string;
-  priority: 'low' | 'normal' | 'high' | 'critical';
-  estimatedDuration: string;
-  capabilities: string[];
-}> = {
-  ultralearn: {
-    description: 'Deep knowledge acquisition and learning',
-    priority: 'normal',
-    estimatedDuration: '60s',
-    capabilities: ['research', 'analysis', 'synthesis'],
-  },
-  optimize: {
-    description: 'Performance optimization and tuning',
-    priority: 'high',
-    estimatedDuration: '30s',
-    capabilities: ['profiling', 'optimization', 'benchmarking'],
-  },
-  consolidate: {
-    description: 'Memory consolidation and cleanup',
-    priority: 'low',
-    estimatedDuration: '20s',
-    capabilities: ['memory-management', 'deduplication'],
-  },
-  predict: {
-    description: 'Predictive preloading and anticipation',
-    priority: 'normal',
-    estimatedDuration: '15s',
-    capabilities: ['prediction', 'caching', 'preloading'],
-  },
-  audit: {
-    description: 'Security analysis and vulnerability scanning',
-    priority: 'critical',
-    estimatedDuration: '45s',
-    capabilities: ['security', 'vulnerability-scanning', 'audit'],
-  },
-  map: {
-    description: 'Codebase mapping and architecture analysis',
-    priority: 'normal',
-    estimatedDuration: '30s',
-    capabilities: ['analysis', 'mapping', 'visualization'],
-  },
-  preload: {
-    description: 'Resource preloading and cache warming',
-    priority: 'low',
-    estimatedDuration: '10s',
-    capabilities: ['caching', 'preloading'],
-  },
-  deepdive: {
-    description: 'Deep code analysis and examination',
-    priority: 'normal',
-    estimatedDuration: '60s',
-    capabilities: ['analysis', 'review', 'understanding'],
-  },
-  document: {
-    description: 'Auto-documentation generation',
-    priority: 'normal',
-    estimatedDuration: '45s',
-    capabilities: ['documentation', 'writing', 'generation'],
-  },
-  refactor: {
-    description: 'Code refactoring suggestions',
-    priority: 'normal',
-    estimatedDuration: '30s',
-    capabilities: ['refactoring', 'code-quality', 'improvement'],
-  },
-  benchmark: {
-    description: 'Performance benchmarking',
-    priority: 'normal',
-    estimatedDuration: '60s',
-    capabilities: ['benchmarking', 'testing', 'measurement'],
-  },
-  testgaps: {
-    description: 'Test coverage analysis',
-    priority: 'normal',
-    estimatedDuration: '30s',
-    capabilities: ['testing', 'coverage', 'analysis'],
-  },
-};
-
-// In-memory worker tracking
-const activeWorkers: Map<string, {
-  id: string;
-  trigger: WorkerTrigger;
-  context: string;
-  status: 'pending' | 'running' | 'completed' | 'failed';
-  progress: number;
-  phase: string;
-  startedAt: Date;
-  completedAt?: Date;
-}> = new Map();
-
-let workerIdCounter = 0;
-
-/**
- * Detect triggers from prompt text
- */
-function detectWorkerTriggers(text: string): {
-  detected: boolean;
-  triggers: WorkerTrigger[];
-  confidence: number;
-  context: string;
-} {
-  if (!text) return { detected: false, triggers: [], confidence: 0, context: '' };
-
-  const detectedTriggers: WorkerTrigger[] = [];
-  let totalMatches = 0;
-
-  for (const [trigger, patterns] of Object.entries(WORKER_TRIGGER_PATTERNS) as [WorkerTrigger, RegExp[]][]) {
-    for (const pattern of patterns) {
-      if (pattern.test(text)) {
-        if (!detectedTriggers.includes(trigger)) {
-          detectedTriggers.push(trigger);
-        }
-        totalMatches++;
-      }
-    }
-  }
-
-  const confidence = detectedTriggers.length > 0
-    ? Math.min(1, totalMatches / (detectedTriggers.length * 2))
-    : 0;
-
-  return {
-    detected: detectedTriggers.length > 0,
-    triggers: detectedTriggers,
-    confidence,
-    context: text.slice(0, 100),
-  };
-}
-
-// Worker list tool
-export const hooksWorkerList: MCPTool = {
-  name: 'hooks_worker-list',
-  description: 'List all 12 background workers with status and capabilities Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      status: { type: 'string', description: 'Filter by status (all, running, completed, pending)' },
-      includeActive: { type: 'boolean', description: 'Include active worker instances' },
-    },
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const statusFilter = (params.status as string) || 'all';
-    const includeActive = params.includeActive !== false;
-
-    const workers = Object.entries(WORKER_CONFIGS).map(([trigger, config]) => ({
-      trigger,
-      ...config,
-      patterns: WORKER_TRIGGER_PATTERNS[trigger as WorkerTrigger].length,
-    }));
-
-    const activeList = includeActive
-      ? Array.from(activeWorkers.values()).filter(w =>
-          statusFilter === 'all' || w.status === statusFilter
-        )
-      : [];
-
-    return {
-      workers,
-      total: 12,
-      active: {
-        instances: activeList,
-        count: activeList.length,
-        byStatus: {
-          pending: activeList.filter(w => w.status === 'pending').length,
-          running: activeList.filter(w => w.status === 'running').length,
-          completed: activeList.filter(w => w.status === 'completed').length,
-          failed: activeList.filter(w => w.status === 'failed').length,
-        },
-      },
-      performanceTargets: {
-        triggerDetection: '<5ms',
-        workerSpawn: '<50ms',
-        maxConcurrent: 10,
-      },
-    };
-  },
-};
-
-// Worker dispatch tool
-export const hooksWorkerDispatch: MCPTool = {
-  name: 'hooks_worker-dispatch',
-  description: 'Dispatch a background worker for analysis/optimization tasks Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      trigger: {
-        type: 'string',
-        description: 'Worker trigger type',
-        enum: ['ultralearn', 'optimize', 'consolidate', 'predict', 'audit', 'map', 'preload', 'deepdive', 'document', 'refactor', 'benchmark', 'testgaps'],
-      },
-      context: { type: 'string', description: 'Context for the worker (file path, topic, etc.)' },
-      priority: { type: 'string', description: 'Priority (low, normal, high, critical)' },
-      background: { type: 'boolean', description: 'Run in background (non-blocking)' },
-    },
-    required: ['trigger'],
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const trigger = params.trigger as WorkerTrigger;
-    const context = (params.context as string) || 'default';
-    const priority = (params.priority as string) || WORKER_CONFIGS[trigger]?.priority || 'normal';
-    const background = params.background !== false;
-
-    if (params.context) { const v = validateText(params.context as string, 'context'); if (!v.valid) return { success: false, error: v.error }; }
-
-    if (!WORKER_CONFIGS[trigger]) {
-      return {
-        success: false,
-        error: `Unknown worker trigger: ${trigger}`,
-        availableTriggers: Object.keys(WORKER_CONFIGS),
-      };
-    }
-
-    const workerId = `worker_${trigger}_${++workerIdCounter}_${Date.now().toString(36)}`;
-    const config = WORKER_CONFIGS[trigger];
-
-    // ADR-093 F2: stop returning status:"completed" for a worker that
-    // never ran (#1700 item 1). Detect daemon presence via PID file and
-    // surface honest verdicts (`no-daemon` / `queued` / `synthetic`).
-    const cwd = getProjectCwd();
-    const pidFile = join(cwd, '.claude-flow', 'daemon.pid');
-    let daemonPid: number | null = null;
-    let daemonAlive = false;
-    if (existsSync(pidFile)) {
-      try {
-        const raw = readFileSync(pidFile, 'utf-8').trim();
-        const pid = parseInt(raw, 10);
-        if (Number.isFinite(pid) && pid > 0) {
-          daemonPid = pid;
-          try { process.kill(pid, 0); daemonAlive = true; } catch { daemonAlive = false; }
-        }
-      } catch { /* unreadable PID file */ }
-    }
-
-    const worker: {
-      id: string;
-      trigger: WorkerTrigger;
-      context: string;
-      status: 'pending' | 'running' | 'completed' | 'failed';
-      progress: number;
-      phase: string;
-      startedAt: Date;
-      completedAt?: Date;
-    } = {
-      id: workerId,
-      trigger,
-      context,
-      status: daemonAlive ? 'pending' : 'pending',
-      progress: 0,
-      phase: 'initializing',
-      startedAt: new Date(),
-    };
-
-    activeWorkers.set(workerId, worker);
-
-    // Determine honest status
-    let reportedStatus: 'queued' | 'no-daemon' | 'synthetic-completed' | 'mcp-only';
-    let note = '';
-    if (!daemonAlive) {
-      reportedStatus = 'no-daemon';
-      note = 'No worker daemon detected. Run `claude-flow daemon start` to enable real worker execution. The dispatch was recorded in-process but no actual work will run.';
-    } else if (background) {
-      // #1845: write a durable queue file the daemon polls every 5s. Until
-      // 3.7.0-alpha.11 the dispatch only updated a process-local Map that
-      // the daemon (separate process) could never see, so `queued` was a
-      // lie. The queue file makes it real and inspectable on disk.
-      const queueDir = join(cwd, '.claude-flow', 'daemon-queue');
-      const queuePath = join(queueDir, `${workerId}.json`);
-      let queueWritten = false;
-      try {
-        if (!existsSync(queueDir)) mkdirSync(queueDir, { recursive: true });
-        writeFileSync(
-          queuePath,
-          JSON.stringify({ workerId, trigger, context, priority, enqueuedAt: new Date().toISOString() }, null, 2),
-        );
-        queueWritten = true;
-      } catch (err) {
-        // Filesystem error — fall back to mcp-only status so we never
-        // claim queued without proof.
-        note = `Daemon detected (pid ${daemonPid}) but queue write to ${queuePath} failed: ${(err as Error).message}. Worker recorded in-process only; use \`ruflo daemon trigger -w ${trigger}\` to run synchronously.`;
-      }
-      if (queueWritten) {
-        reportedStatus = 'queued';
-        note = `Worker queued for daemon (pid ${daemonPid}) at ${queuePath}. Daemon polls every 5s; processed entries move to .claude-flow/daemon-queue/.processed/. Poll hooks_worker-status until status === "completed".`;
-      } else {
-        reportedStatus = 'mcp-only';
-      }
-    } else {
-      // Synchronous mode without a runner — be honest about it
-      reportedStatus = 'synthetic-completed';
-      worker.progress = 100;
-      worker.phase = 'completed';
-      worker.status = 'completed';
-      worker.completedAt = new Date();
-      note = 'Synchronous mode: worker record marked completed but no real work executed (no in-process runner). Use background:true with the daemon for real execution.';
-    }
-
-    return {
-      success: true,
-      workerId,
-      trigger,
-      context,
-      priority,
-      config: {
-        description: config.description,
-        estimatedDuration: config.estimatedDuration,
-        capabilities: config.capabilities,
-      },
-      status: reportedStatus,
-      daemonAlive,
-      daemonPid: daemonAlive ? daemonPid : null,
-      background,
-      note,
-      timestamp: new Date().toISOString(),
-    };
-  },
-};
-
-// Worker status tool
-export const hooksWorkerStatus: MCPTool = {
-  name: 'hooks_worker-status',
-  description: 'Get status of a specific worker or all active workers Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      workerId: { type: 'string', description: 'Specific worker ID to check' },
-      includeCompleted: { type: 'boolean', description: 'Include completed workers' },
-    },
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const workerId = params.workerId as string;
-    const includeCompleted = params.includeCompleted !== false;
-
-    if (workerId) { const v = validateIdentifier(workerId, 'workerId'); if (!v.valid) return { success: false, error: v.error }; }
-
-    if (workerId) {
-      const worker = activeWorkers.get(workerId);
-      if (!worker) {
-        return {
-          success: false,
-          error: `Worker not found: ${workerId}`,
-        };
-      }
-      return {
-        success: true,
-        worker: {
-          ...worker,
-          duration: worker.completedAt
-            ? worker.completedAt.getTime() - worker.startedAt.getTime()
-            : Date.now() - worker.startedAt.getTime(),
-        },
-      };
-    }
-
-    const workers = Array.from(activeWorkers.values())
-      .filter(w => includeCompleted || w.status !== 'completed')
-      .map(w => ({
-        ...w,
-        duration: w.completedAt
-          ? w.completedAt.getTime() - w.startedAt.getTime()
-          : Date.now() - w.startedAt.getTime(),
-      }));
-
-    return {
-      success: true,
-      workers,
-      summary: {
-        total: workers.length,
-        running: workers.filter(w => w.status === 'running').length,
-        completed: workers.filter(w => w.status === 'completed').length,
-        failed: workers.filter(w => w.status === 'failed').length,
-      },
-    };
-  },
-};
-
-// Worker detect tool - detect triggers from prompt
-export const hooksWorkerDetect: MCPTool = {
-  name: 'hooks_worker-detect',
-  description: 'Detect worker triggers from user prompt (for UserPromptSubmit hook) Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      prompt: { type: 'string', description: 'User prompt to analyze' },
-      autoDispatch: { type: 'boolean', description: 'Automatically dispatch detected workers' },
-      minConfidence: { type: 'number', description: 'Minimum confidence threshold (0-1)' },
-    },
-    required: ['prompt'],
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const prompt = params.prompt as string;
-    const autoDispatch = params.autoDispatch as boolean;
-    const minConfidence = (params.minConfidence as number) || 0.5;
-
-    { const v = validateText(prompt, 'prompt'); if (!v.valid) return { success: false, error: v.error }; }
-
-    const detection = detectWorkerTriggers(prompt);
-
-    const result: Record<string, unknown> = {
-      prompt: prompt.slice(0, 200) + (prompt.length > 200 ? '...' : ''),
-      detection,
-      triggersFound: detection.triggers.length,
-    };
-
-    if (detection.detected && detection.confidence >= minConfidence) {
-      result.triggerDetails = detection.triggers.map(trigger => ({
-        trigger,
-        ...WORKER_CONFIGS[trigger],
-      }));
-
-      if (autoDispatch) {
-        const dispatched: string[] = [];
-        for (const trigger of detection.triggers) {
-          const workerId = `worker_${trigger}_${++workerIdCounter}_${Date.now().toString(36)}`;
-          activeWorkers.set(workerId, {
-            id: workerId,
-            trigger,
-            context: prompt.slice(0, 100),
-            status: 'running',
-            progress: 0,
-            phase: 'initializing',
-            startedAt: new Date(),
-          });
-          dispatched.push(workerId);
-
-          // Mark worker completion after processing
-          setTimeout(() => {
-            const w = activeWorkers.get(workerId);
-            if (w) {
-              w.progress = 100;
-              w.phase = 'completed';
-              w.status = 'completed';
-              w.completedAt = new Date();
-            }
-          }, 1500);
-        }
-        result.autoDispatched = true;
-        result.workerIds = dispatched;
-      }
-    }
-
-    return result;
-  },
-};
-
-// Model router - lazy loaded
-let modelRouterInstance: Awaited<ReturnType<typeof import('../ruvector/model-router.js').getModelRouter>> | null = null;
-async function getModelRouterInstance() {
-  if (!modelRouterInstance) {
-    try {
-      const { getModelRouter } = await import('../ruvector/model-router.js');
-      modelRouterInstance = getModelRouter();
-    } catch {
-      modelRouterInstance = null;
-    }
-  }
-  return modelRouterInstance;
-}
-
-// Model route tool - intelligent model selection
-export const hooksModelRoute: MCPTool = {
-  name: 'hooks_model-route',
-  description: 'Route task to optimal Claude model (haiku/sonnet/opus) based on complexity Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      task: { type: 'string', description: 'Task description to analyze' },
-      preferSpeed: { type: 'boolean', description: 'Prefer faster models when possible' },
-      preferCost: { type: 'boolean', description: 'Prefer cheaper models when possible' },
-    },
-    required: ['task'],
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const task = params.task as string;
-
-    { const v = validateText(task, 'task'); if (!v.valid) return { success: false, error: v.error }; }
-
-    const router = await getModelRouterInstance();
-
-    if (!router) {
-      // Fallback to simple heuristic
-      const complexity = analyzeComplexityFallback(task);
-      return {
-        model: complexity > 0.7 ? 'opus' : complexity > 0.4 ? 'sonnet' : 'haiku',
-        confidence: 0.7,
-        complexity,
-        reasoning: 'Fallback heuristic (model router not available)',
-        implementation: 'fallback',
-      };
-    }
-
-    const result = await router.route(task);
-    return {
-      model: result.model,
-      confidence: result.confidence,
-      uncertainty: result.uncertainty,
-      complexity: result.complexity,
-      reasoning: result.reasoning,
-      alternatives: result.alternatives,
-      inferenceTimeUs: result.inferenceTimeUs,
-      costMultiplier: result.costMultiplier,
-      implementation: 'tiny-dancer-neural',
-    };
-  },
-};
-
-// Model route outcome - record outcome for learning
-export const hooksModelOutcome: MCPTool = {
-  name: 'hooks_model-outcome',
-  description: 'Record model routing outcome for learning Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      task: { type: 'string', description: 'Original task' },
-      model: { type: 'string', enum: ['haiku', 'sonnet', 'opus'], description: 'Model used' },
-      outcome: { type: 'string', enum: ['success', 'failure', 'escalated'], description: 'Task outcome' },
-    },
-    required: ['task', 'model', 'outcome'],
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const task = params.task as string;
-    const model = params.model as 'haiku' | 'sonnet' | 'opus';
-    const outcome = params.outcome as 'success' | 'failure' | 'escalated';
-
-    { const v = validateText(task, 'task'); if (!v.valid) return { success: false, error: v.error }; }
-
-    const router = await getModelRouterInstance();
-    if (router) {
-      router.recordOutcome(task, model, outcome);
-    }
-
-    return {
-      recorded: true,
-      task: task.slice(0, 50),
-      model,
-      outcome,
-      timestamp: new Date().toISOString(),
-    };
-  },
-};
-
-// Model router stats
-export const hooksModelStats: MCPTool = {
-  name: 'hooks_model-stats',
-  description: 'Get model routing statistics Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {},
-  },
-  handler: async () => {
-    const router = await getModelRouterInstance();
-    if (!router) {
-      return {
-        available: false,
-        message: 'Model router not initialized',
-      };
-    }
-
-    const stats = router.getStats();
-    return {
-      available: true,
-      ...stats,
-      timestamp: new Date().toISOString(),
-    };
-  },
-};
-
-// Simple fallback complexity analyzer
-function analyzeComplexityFallback(task: string): number {
-  const taskLower = task.toLowerCase();
-
-  // High complexity indicators
-  const highIndicators = ['architect', 'design', 'refactor', 'security', 'audit', 'complex', 'analyze'];
-  const highCount = highIndicators.filter(ind => taskLower.includes(ind)).length;
-
-  // Low complexity indicators
-  const lowIndicators = ['simple', 'typo', 'format', 'rename', 'comment'];
-  const lowCount = lowIndicators.filter(ind => taskLower.includes(ind)).length;
-
-  // Base on length
-  const lengthScore = Math.min(1, task.length / 200);
-
-  return Math.min(1, Math.max(0, 0.3 + highCount * 0.2 - lowCount * 0.15 + lengthScore * 0.2));
-}
-
-// Worker cancel tool
-export const hooksWorkerCancel: MCPTool = {
-  name: 'hooks_worker-cancel',
-  description: 'Cancel a running worker Use when native Bash hooks (via Claude Code\'s settings.json) are wrong because you need Ruflo-side state — pattern persistence, neural training signals, model-routing learning, cost tracking, audit chain. For one-off shell commands, plain Bash hooks are fine.',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      workerId: { type: 'string', description: 'Worker ID to cancel' },
-    },
-    required: ['workerId'],
-  },
-  handler: async (params: Record<string, unknown>) => {
-    const workerId = params.workerId as string;
-
-    { const v = validateIdentifier(workerId, 'workerId'); if (!v.valid) return { success: false, error: v.error }; }
-
-    const worker = activeWorkers.get(workerId);
-
-    if (!worker) {
-      return {
-        success: false,
-        error: `Worker not found: ${workerId}`,
-      };
-    }
-
-    if (worker.status === 'completed' || worker.status === 'failed') {
-      return {
-        success: false,
-        error: `Worker already ${worker.status}`,
-      };
-    }
-
-    worker.status = 'failed';
-    worker.phase = 'cancelled';
-    worker.completedAt = new Date();
-
-    return {
-      success: true,
-      workerId,
-      cancelled: true,
-      timestamp: new Date().toISOString(),
-    };
-  },
-};
-
-// #1916: the `ruflo hooks teammate-idle` / `ruflo hooks task-completed` CLI
-// subcommands (Agent Teams hooks) referenced unregistered tools. Minimal
-// acknowledgement handlers with the shapes the CLI expects — auto-assignment
-// and pattern-learning are delegated to the task-queue consumer / intelligence
-// pipeline (a tracked #1916 follow-up).
-export const hooksTeammateIdle: MCPTool = {
-  name: 'hooks_teammate-idle',
-  description: 'Agent Teams hook — fired when a teammate agent finishes its turn; reports whether a pending task can be auto-assigned. Use when native Task is wrong because you have a persistent multi-agent team with a shared task list and want idle workers picked up automatically rather than re-spawning subagents. For a one-shot Task, native Task is fine. (Auto-assignment is delegated to the task-queue consumer — this acknowledges the event today.)',
-  category: 'hooks',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      teammateId: { type: 'string', description: 'ID of the idle teammate' },
-      teamName: { type: 'string', description: 'Team name' },
-      autoAssign: { type: 'boolean', description: 'Auto-assign a pending task if available' },
-      checkTaskList: { type: 'boolean', description: 'Consult the shared task list' },
-      timestamp: { type: 'number', description: 'Event timestamp (ms)' },
-    },
-  },
-  handler: async (input) => {
-    const teammateId = String(input.teammateId ?? '');
-    return {
-      success: true,
-      teammateId,
-      action: 'waiting' as const,
-      pendingTasks: 0,
-      message: 'teammate-idle acknowledged; auto-assignment requires the task-queue consumer (#1916 follow-up)',
-    };
-  },
-};
-
-export const hooksTaskCompleted: MCPTool = {
-  name: 'hooks_task-completed',
-  description: 'Agent Teams hook — fired when a task is marked complete; records completion and (eventually) trains patterns + notifies the team lead. Use when native TodoWrite is wrong because the work was a persisted, agent-assigned task whose outcome should feed cross-session learning and team coordination. For an in-session checklist tick, native TodoWrite is fine. (Pattern-learning is delegated to the intelligence pipeline — this records the completion today.)',
-  category: 'hooks',
-  inputSchema: {
-    type: 'object',
-    properties: {
-      taskId: { type: 'string', description: 'ID of the completed task' },
-      teammateId: { type: 'string', description: 'Teammate that completed it' },
-      success: { type: 'boolean', description: 'Whether the task succeeded' },
-      quality: { type: 'number', description: 'Quality score 0-1' },
-      trainPatterns: { type: 'boolean', description: 'Feed the outcome to the learning pipeline' },
-      notifyLead: { type: 'boolean', description: 'Notify the team lead' },
-    },
-    required: ['taskId'],
-  },
-  handler: async (input) => {
-    const taskId = String(input.taskId ?? '');
-    const quality = typeof input.quality === 'number' ? input.quality : (input.success === false ? 0 : 1);
-    return {
-      success: true,
-      taskId,
-      patternsLearned: 0,
-      leadNotified: input.notifyLead === true,
-      metrics: { duration: 0, quality, learningUpdates: 0 },
-      note: 'completion recorded; pattern-learning is delegated to the intelligence pipeline (#1916 follow-up)',
-    };
-  },
-};
-
-// Export all hooks tools
-export const hooksTools: MCPTool[] = [
-  hooksTeammateIdle,
-  hooksTaskCompleted,
-  hooksPreEdit,
-  hooksPostEdit,
-  hooksPreCommand,
-  hooksPostCommand,
-  hooksRoute,
-  hooksMetrics,
-  hooksList,
-  hooksPreTask,
-  hooksPostTask,
-  // New hooks
-  hooksExplain,
-  hooksPretrain,
-  hooksBuildAgents,
-  hooksTransfer,
-  hooksSessionStart,
-  hooksSessionEnd,
-  hooksSessionRestore,
-  hooksNotify,
-  hooksInit,
-  hooksIntelligence,
-  hooksIntelligenceReset,
-  hooksTrajectoryStart,
-  hooksTrajectoryStep,
-  hooksTrajectoryEnd,
-  hooksPatternStore,
-  hooksPatternSearch,
-  hooksIntelligenceStats,
-  hooksIntelligenceLearn,
-  hooksIntelligenceAttention,
-  // Worker tools
-  hooksWorkerList,
-  hooksWorkerDispatch,
-  hooksWorkerStatus,
-  hooksWorkerDetect,
-  hooksWorkerCancel,
-  // Model routing tools
-  hooksModelRoute,
-  hooksModelOutcome,
-  hooksModelStats,
-];
-
-export default hooksTools;