claude-brain 0.30.2 → 0.30.3

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (236) hide show
  1. package/README.md +241 -191
  2. package/VERSION +1 -1
  3. package/assets/CLAUDE-unified.md +11 -11
  4. package/assets/CLAUDE.md +29 -29
  5. package/package.json +7 -3
  6. package/packs/backend/node.json +173 -173
  7. package/packs/core/javascript.json +176 -176
  8. package/packs/core/typescript.json +222 -222
  9. package/packs/frontend/react.json +254 -254
  10. package/packs/meta/testing.json +172 -172
  11. package/scripts/postinstall.mjs +531 -531
  12. package/src/automation/decision-detector.ts +452 -452
  13. package/src/automation/phase12-manager.ts +456 -456
  14. package/src/automation/proactive-recall.ts +373 -373
  15. package/src/automation/project-detector.ts +310 -310
  16. package/src/automation/repo-scanner.ts +210 -205
  17. package/src/cli/auto-setup.ts +75 -75
  18. package/src/cli/auto-start.ts +266 -266
  19. package/src/cli/bin.ts +264 -264
  20. package/src/cli/commands/autostart.ts +90 -90
  21. package/src/cli/commands/chroma.ts +578 -577
  22. package/src/cli/commands/export-training.ts +70 -70
  23. package/src/cli/commands/export.ts +130 -130
  24. package/src/cli/commands/git-hook.ts +183 -183
  25. package/src/cli/commands/hooks.ts +217 -217
  26. package/src/cli/commands/init.ts +123 -123
  27. package/src/cli/commands/install-mcp.ts +122 -111
  28. package/src/cli/commands/models.ts +979 -979
  29. package/src/cli/commands/pack.ts +200 -200
  30. package/src/cli/commands/refresh.ts +344 -339
  31. package/src/cli/commands/reindex.ts +120 -120
  32. package/src/cli/commands/serve.ts +466 -463
  33. package/src/cli/commands/start.ts +44 -44
  34. package/src/cli/commands/status.ts +220 -203
  35. package/src/cli/commands/uninstall-mcp.ts +45 -41
  36. package/src/cli/commands/update.ts +130 -124
  37. package/src/cli/migrate-chroma.ts +106 -106
  38. package/src/cli/ui/animations.ts +80 -80
  39. package/src/cli/ui/components.ts +82 -82
  40. package/src/cli/ui/index.ts +4 -4
  41. package/src/cli/ui/logo.ts +36 -36
  42. package/src/cli/ui/theme.ts +55 -55
  43. package/src/code-intelligence/indexer.ts +352 -352
  44. package/src/code-intelligence/linker.ts +178 -178
  45. package/src/code-intelligence/parser.ts +484 -484
  46. package/src/code-intelligence/query.ts +291 -291
  47. package/src/code-intelligence/schema.ts +83 -83
  48. package/src/code-intelligence/types.ts +95 -95
  49. package/src/config/defaults.ts +52 -52
  50. package/src/config/home.ts +56 -56
  51. package/src/config/index.ts +5 -5
  52. package/src/config/loader.ts +192 -192
  53. package/src/config/schema.ts +446 -415
  54. package/src/config/validator.ts +182 -182
  55. package/src/context/assembler.ts +407 -400
  56. package/src/context/index.ts +79 -79
  57. package/src/context/progress-tracker.ts +174 -174
  58. package/src/context/standards-manager.ts +287 -287
  59. package/src/context/validator.ts +58 -58
  60. package/src/diagnostics/index.ts +122 -121
  61. package/src/health/index.ts +233 -232
  62. package/src/hooks/brain-hook.ts +134 -131
  63. package/src/hooks/capture.ts +168 -168
  64. package/src/hooks/claude-code-mastery.md +112 -112
  65. package/src/hooks/context-hook.ts +260 -245
  66. package/src/hooks/deduplicator.ts +72 -72
  67. package/src/hooks/git-capture.ts +109 -109
  68. package/src/hooks/git-hook-installer.ts +211 -207
  69. package/src/hooks/index.ts +20 -20
  70. package/src/hooks/installer.ts +306 -288
  71. package/src/hooks/interceptor-hook.ts +204 -201
  72. package/src/hooks/passive-classifier.ts +397 -397
  73. package/src/hooks/queue.ts +160 -129
  74. package/src/hooks/session-tracker.ts +312 -312
  75. package/src/hooks/types.ts +52 -52
  76. package/src/index.ts +7 -7
  77. package/src/intelligence/cross-project/generalizer.ts +283 -283
  78. package/src/intelligence/cross-project/index.ts +7 -7
  79. package/src/intelligence/hf-downloader.ts +222 -222
  80. package/src/intelligence/hf-manifest.json +78 -78
  81. package/src/intelligence/index.ts +24 -24
  82. package/src/intelligence/inference-router.ts +762 -762
  83. package/src/intelligence/model-manager.ts +263 -245
  84. package/src/intelligence/optimization/index.ts +10 -10
  85. package/src/intelligence/optimization/precompute.ts +202 -202
  86. package/src/intelligence/optimization/semantic-cache.ts +213 -207
  87. package/src/intelligence/prediction/index.ts +7 -7
  88. package/src/intelligence/prediction/recommender.ts +276 -268
  89. package/src/intelligence/reasoning/chain-retrieval.ts +243 -247
  90. package/src/intelligence/reasoning/index.ts +7 -7
  91. package/src/intelligence/temporal/evolution.ts +193 -197
  92. package/src/intelligence/temporal/index.ts +16 -16
  93. package/src/intelligence/temporal/query-processor.ts +190 -190
  94. package/src/intelligence/temporal/timeline.ts +272 -259
  95. package/src/intelligence/temporal/trends.ts +263 -263
  96. package/src/intelligence/tokenizer.ts +118 -118
  97. package/src/knowledge/entity-extractor.ts +447 -443
  98. package/src/knowledge/graph/builder.ts +185 -185
  99. package/src/knowledge/graph/linker.ts +201 -201
  100. package/src/knowledge/graph/memory-graph.ts +359 -359
  101. package/src/knowledge/graph/schema.ts +99 -99
  102. package/src/knowledge/graph/search.ts +166 -166
  103. package/src/knowledge/relationship-extractor.ts +108 -108
  104. package/src/memory/chroma/client.ts +211 -192
  105. package/src/memory/chroma/collection-manager.ts +92 -92
  106. package/src/memory/chroma/config.ts +57 -57
  107. package/src/memory/chroma/embeddings.ts +177 -175
  108. package/src/memory/chroma/index.ts +82 -82
  109. package/src/memory/chroma/migration.ts +270 -270
  110. package/src/memory/chroma/schemas.ts +69 -69
  111. package/src/memory/chroma/search.ts +319 -315
  112. package/src/memory/chroma/store.ts +755 -747
  113. package/src/memory/compression.ts +121 -121
  114. package/src/memory/consolidation/archiver.ts +162 -165
  115. package/src/memory/consolidation/merger.ts +182 -186
  116. package/src/memory/consolidation/scorer.ts +136 -136
  117. package/src/memory/database.ts +9 -0
  118. package/src/memory/dual-write.ts +145 -0
  119. package/src/memory/embeddings.ts +226 -226
  120. package/src/memory/episodic/detector.ts +108 -108
  121. package/src/memory/episodic/manager.ts +347 -351
  122. package/src/memory/episodic/summarizer.ts +179 -179
  123. package/src/memory/episodic/types.ts +52 -52
  124. package/src/memory/fts5-search.ts +692 -633
  125. package/src/memory/index.ts +943 -1060
  126. package/src/memory/migrations/add-fts5.ts +118 -108
  127. package/src/memory/patterns.ts +438 -438
  128. package/src/memory/pruning.ts +60 -60
  129. package/src/memory/schema.ts +88 -88
  130. package/src/memory/store.ts +911 -787
  131. package/src/orchestrator/handlers/decision-handler.ts +204 -204
  132. package/src/packs/index.ts +9 -9
  133. package/src/packs/loader.ts +134 -134
  134. package/src/packs/manager.ts +204 -204
  135. package/src/packs/ranker.ts +78 -78
  136. package/src/packs/types.ts +81 -81
  137. package/src/phase12/index.ts +5 -5
  138. package/src/retrieval/bm25/index.ts +300 -297
  139. package/src/retrieval/bm25/tokenizer.ts +184 -184
  140. package/src/retrieval/feedback/adaptive.ts +221 -221
  141. package/src/retrieval/feedback/index.ts +16 -16
  142. package/src/retrieval/feedback/metrics.ts +221 -221
  143. package/src/retrieval/feedback/store.ts +283 -283
  144. package/src/retrieval/fusion/index.ts +194 -194
  145. package/src/retrieval/fusion/rrf.ts +165 -165
  146. package/src/retrieval/index.ts +12 -12
  147. package/src/retrieval/pipeline.ts +375 -375
  148. package/src/retrieval/query/expander.ts +203 -203
  149. package/src/retrieval/query/index.ts +27 -27
  150. package/src/retrieval/query/intent-classifier.ts +252 -252
  151. package/src/retrieval/query/temporal-parser.ts +295 -295
  152. package/src/retrieval/reranker/index.ts +189 -188
  153. package/src/retrieval/reranker/model.ts +99 -95
  154. package/src/retrieval/service.ts +125 -125
  155. package/src/retrieval/types.ts +162 -162
  156. package/src/routing/entity-extractor.ts +454 -454
  157. package/src/routing/handlers/exploration-handler.ts +369 -0
  158. package/src/routing/handlers/index.ts +19 -0
  159. package/src/routing/handlers/memory-handler.ts +273 -0
  160. package/src/routing/handlers/mutation-handler.ts +241 -0
  161. package/src/routing/handlers/recall-handler.ts +642 -0
  162. package/src/routing/handlers/shared.ts +515 -0
  163. package/src/routing/handlers/types.ts +48 -0
  164. package/src/routing/intent-classifier.ts +552 -552
  165. package/src/routing/response-filter.ts +399 -391
  166. package/src/routing/router.ts +245 -2193
  167. package/src/routing/search-engine.ts +521 -514
  168. package/src/routing/types.ts +104 -94
  169. package/src/scripts/health-check.ts +118 -118
  170. package/src/scripts/setup.ts +122 -122
  171. package/src/server/auto-updater.ts +283 -276
  172. package/src/server/handlers/call-tool.ts +159 -159
  173. package/src/server/handlers/list-tools.ts +35 -35
  174. package/src/server/handlers/tools/auto-remember.ts +165 -165
  175. package/src/server/handlers/tools/brain.ts +86 -86
  176. package/src/server/handlers/tools/create-project.ts +135 -135
  177. package/src/server/handlers/tools/get-code-standards.ts +123 -123
  178. package/src/server/handlers/tools/get-corrections.ts +152 -152
  179. package/src/server/handlers/tools/get-patterns.ts +156 -156
  180. package/src/server/handlers/tools/get-project-context.ts +75 -75
  181. package/src/server/handlers/tools/index.ts +30 -30
  182. package/src/server/handlers/tools/init-project.ts +756 -756
  183. package/src/server/handlers/tools/list-projects.ts +126 -126
  184. package/src/server/handlers/tools/recall-similar.ts +87 -87
  185. package/src/server/handlers/tools/recognize-pattern.ts +132 -132
  186. package/src/server/handlers/tools/record-correction.ts +131 -131
  187. package/src/server/handlers/tools/remember-decision.ts +168 -168
  188. package/src/server/handlers/tools/schemas.ts +179 -179
  189. package/src/server/handlers/tools/search-code.ts +122 -122
  190. package/src/server/handlers/tools/smart-context.ts +146 -146
  191. package/src/server/handlers/tools/update-progress.ts +131 -131
  192. package/src/server/http-api.ts +215 -1229
  193. package/src/server/mcp-proxy.ts +85 -84
  194. package/src/server/mcp-server.ts +285 -284
  195. package/src/server/middleware/auth.ts +39 -0
  196. package/src/server/middleware/error-handler.ts +37 -0
  197. package/src/server/middleware/rate-limit.ts +53 -0
  198. package/src/server/middleware/validate.ts +42 -0
  199. package/src/server/pid-manager.ts +137 -136
  200. package/src/server/providers/resources.ts +581 -581
  201. package/src/server/routes/code.ts +228 -0
  202. package/src/server/routes/context.ts +26 -0
  203. package/src/server/routes/health.ts +19 -0
  204. package/src/server/routes/helpers.ts +100 -0
  205. package/src/server/routes/hooks.ts +197 -0
  206. package/src/server/routes/mcp.ts +47 -0
  207. package/src/server/routes/memory.ts +397 -0
  208. package/src/server/routes/models.ts +96 -0
  209. package/src/server/routes/projects.ts +89 -0
  210. package/src/server/routes/types.ts +21 -0
  211. package/src/server/schemas/api-schemas.ts +202 -0
  212. package/src/server/services.ts +720 -720
  213. package/src/server/utils/memory-indicator.ts +84 -84
  214. package/src/server/utils/response-formatter.ts +129 -129
  215. package/src/server/web-viewer.ts +1145 -1115
  216. package/src/setup/index.ts +38 -38
  217. package/src/tools/registry.ts +115 -115
  218. package/src/tools/schemas.ts +666 -666
  219. package/src/tools/types.ts +412 -412
  220. package/src/training/data-store.ts +320 -298
  221. package/src/training/retrain-pipeline.ts +399 -394
  222. package/src/utils/error-handler.ts +136 -136
  223. package/src/utils/index.ts +58 -58
  224. package/src/utils/kill-port.ts +55 -53
  225. package/src/utils/phase12-helper.ts +56 -56
  226. package/src/utils/safe-path.ts +43 -0
  227. package/src/utils/timing.ts +47 -47
  228. package/src/utils/transaction.ts +63 -63
  229. package/src/vault/index.ts +4 -3
  230. package/src/vault/paths.ts +106 -106
  231. package/src/vault/query.ts +4 -1
  232. package/src/vault/reader.ts +44 -1
  233. package/src/vault/watcher.ts +24 -1
  234. package/src/vault/writer.ts +487 -413
  235. package/skills/persistent-memory/SKILL.md +0 -148
  236. package/skills/persistent-memory/references/tool-reference.md +0 -90
@@ -1,178 +1,178 @@
1
- /**
2
- * MemoryCodeLinker — Phase 29: Code-Anchored Memory
3
- *
4
- * Links stored observations to code files automatically using three strategies:
5
- * 1. Explicit file paths mentioned in content
6
- * 2. Recently edited files (from activity_log)
7
- * 3. Symbol name matching (from code_symbols table)
8
- *
9
- * All linkage is fire-and-forget — failures are non-fatal.
10
- */
11
-
12
- import type { Database } from 'bun:sqlite'
13
- import type { Logger } from 'pino'
14
-
15
- /** Regex to extract file paths from memory content */
16
- const FILE_PATH_REGEX = /(?:^|\s)((?:src|lib|app|pages|components|utils|hooks|server|api|config|middleware|routes|models|services|types|scripts|tests|test)\/[\w\-./]+\.\w+)/g
17
-
18
- /** Regex to extract camelCase/PascalCase/snake_case identifiers >4 chars */
19
- const SYMBOL_REGEX = /\b([a-z][a-zA-Z0-9]{3,}|[A-Z][a-zA-Z0-9]{3,}|[a-z]+(?:_[a-z]+){1,})\b/g
20
-
21
- /** Max symbol candidates to query against code_symbols */
22
- const MAX_SYMBOL_CANDIDATES = 20
23
-
24
- export class MemoryCodeLinker {
25
- constructor(
26
- private memoryDb: Database,
27
- private codeDb: Database | null,
28
- private logger: Logger
29
- ) {
30
- this.logger = logger.child({ component: 'code-linker' })
31
- }
32
-
33
- /**
34
- * Link an observation to relevant code files.
35
- * Called after storing an observation — non-blocking, fire-and-forget.
36
- * Returns the file paths that were linked.
37
- */
38
- async linkObservation(observationId: string, content: string, project: string): Promise<string[]> {
39
- const filePaths = new Set<string>()
40
- const symbols = new Set<string>()
41
-
42
- // Strategy 1: Explicit file paths in content
43
- try {
44
- const explicitPaths = this.extractFilePaths(content)
45
- for (const p of explicitPaths) filePaths.add(p)
46
- } catch (err) {
47
- this.logger.debug({ err }, 'Strategy 1 (explicit paths) failed')
48
- }
49
-
50
- // Strategy 2: Recently edited files
51
- try {
52
- const recentFiles = this.getRecentlyEditedFiles(project)
53
- for (const p of recentFiles) filePaths.add(p)
54
- } catch (err) {
55
- this.logger.debug({ err }, 'Strategy 2 (recent files) failed')
56
- }
57
-
58
- // Strategy 3: Symbol name matching (only when codeDb available)
59
- if (this.codeDb) {
60
- try {
61
- const symbolMatches = this.matchSymbols(content, project)
62
- for (const match of symbolMatches) {
63
- filePaths.add(match.filePath)
64
- symbols.add(match.symbol)
65
- }
66
- } catch (err) {
67
- this.logger.debug({ err }, 'Strategy 3 (symbol matching) failed')
68
- }
69
- }
70
-
71
- if (filePaths.size === 0 && symbols.size === 0) {
72
- return []
73
- }
74
-
75
- // Update the observation with linked paths and symbols
76
- const pathsArray = [...filePaths]
77
- const symbolsArray = [...symbols]
78
-
79
- try {
80
- this.memoryDb.prepare(
81
- `UPDATE observations SET file_paths = ?, symbols = ?, updated_at = ? WHERE id = ?`
82
- ).run(
83
- JSON.stringify(pathsArray),
84
- JSON.stringify(symbolsArray),
85
- new Date().toISOString(),
86
- observationId
87
- )
88
-
89
- this.logger.debug(
90
- { observationId, paths: pathsArray.length, symbols: symbolsArray.length },
91
- 'Observation linked to code'
92
- )
93
- } catch (err) {
94
- this.logger.debug({ err, observationId }, 'Failed to update observation with code links')
95
- }
96
-
97
- return pathsArray
98
- }
99
-
100
- /**
101
- * Strategy 1: Extract explicit file paths from content.
102
- */
103
- private extractFilePaths(content: string): string[] {
104
- const paths: string[] = []
105
- let match: RegExpExecArray | null
106
-
107
- // Reset regex state
108
- FILE_PATH_REGEX.lastIndex = 0
109
- while ((match = FILE_PATH_REGEX.exec(content)) !== null) {
110
- paths.push(match[1])
111
- }
112
-
113
- return [...new Set(paths)]
114
- }
115
-
116
- /**
117
- * Strategy 2: Get recently edited files from activity_log.
118
- * Gracefully degrades if the table doesn't exist or has a different schema.
119
- */
120
- private getRecentlyEditedFiles(project: string): string[] {
121
- try {
122
- const rows = this.memoryDb.prepare(`
123
- SELECT DISTINCT json_extract(metadata, '$.file_path') as file_path
124
- FROM activity_log
125
- WHERE project = ?
126
- AND tool_name IN ('Write', 'Edit')
127
- AND json_extract(metadata, '$.file_path') IS NOT NULL
128
- ORDER BY created_at DESC
129
- LIMIT 5
130
- `).all(project) as { file_path: string }[]
131
-
132
- return rows.map(r => r.file_path).filter(Boolean)
133
- } catch {
134
- // activity_log table may not exist — graceful degradation
135
- return []
136
- }
137
- }
138
-
139
- /**
140
- * Strategy 3: Match potential symbol names from content against code_symbols.
141
- */
142
- private matchSymbols(content: string, project: string): { symbol: string; filePath: string }[] {
143
- if (!this.codeDb) return []
144
-
145
- // Extract candidate symbols from content
146
- const candidates = new Set<string>()
147
- let match: RegExpExecArray | null
148
-
149
- SYMBOL_REGEX.lastIndex = 0
150
- while ((match = SYMBOL_REGEX.exec(content)) !== null) {
151
- if (candidates.size >= MAX_SYMBOL_CANDIDATES) break
152
- candidates.add(match[1])
153
- }
154
-
155
- if (candidates.size === 0) return []
156
-
157
- // Query code_symbols for matches
158
- const results: { symbol: string; filePath: string }[] = []
159
- const placeholders = [...candidates].map(() => '?').join(', ')
160
-
161
- try {
162
- const rows = this.codeDb.prepare(`
163
- SELECT DISTINCT symbol_name, file_path
164
- FROM code_symbols
165
- WHERE project = ? AND symbol_name IN (${placeholders})
166
- LIMIT 20
167
- `).all(project, ...candidates) as { symbol_name: string; file_path: string }[]
168
-
169
- for (const row of rows) {
170
- results.push({ symbol: row.symbol_name, filePath: row.file_path })
171
- }
172
- } catch (err) {
173
- this.logger.debug({ err }, 'Symbol matching query failed')
174
- }
175
-
176
- return results
177
- }
178
- }
1
+ /**
2
+ * MemoryCodeLinker — Phase 29: Code-Anchored Memory
3
+ *
4
+ * Links stored observations to code files automatically using three strategies:
5
+ * 1. Explicit file paths mentioned in content
6
+ * 2. Recently edited files (from activity_log)
7
+ * 3. Symbol name matching (from code_symbols table)
8
+ *
9
+ * All linkage is fire-and-forget — failures are non-fatal.
10
+ */
11
+
12
+ import type { Database } from 'bun:sqlite'
13
+ import type { Logger } from 'pino'
14
+
15
+ /** Regex to extract file paths from memory content */
16
+ const FILE_PATH_REGEX = /(?:^|\s)((?:src|lib|app|pages|components|utils|hooks|server|api|config|middleware|routes|models|services|types|scripts|tests|test)\/[\w\-./]+\.\w+)/g
17
+
18
+ /** Regex to extract camelCase/PascalCase/snake_case identifiers >4 chars */
19
+ const SYMBOL_REGEX = /\b([a-z][a-zA-Z0-9]{3,}|[A-Z][a-zA-Z0-9]{3,}|[a-z]+(?:_[a-z]+){1,})\b/g
20
+
21
+ /** Max symbol candidates to query against code_symbols */
22
+ const MAX_SYMBOL_CANDIDATES = 20
23
+
24
+ export class MemoryCodeLinker {
25
+ constructor(
26
+ private memoryDb: Database,
27
+ private codeDb: Database | null,
28
+ private logger: Logger
29
+ ) {
30
+ this.logger = logger.child({ component: 'code-linker' })
31
+ }
32
+
33
+ /**
34
+ * Link an observation to relevant code files.
35
+ * Called after storing an observation — non-blocking, fire-and-forget.
36
+ * Returns the file paths that were linked.
37
+ */
38
+ async linkObservation(observationId: string, content: string, project: string): Promise<string[]> {
39
+ const filePaths = new Set<string>()
40
+ const symbols = new Set<string>()
41
+
42
+ // Strategy 1: Explicit file paths in content
43
+ try {
44
+ const explicitPaths = this.extractFilePaths(content)
45
+ for (const p of explicitPaths) filePaths.add(p)
46
+ } catch (err) {
47
+ this.logger.debug({ err }, 'Strategy 1 (explicit paths) failed')
48
+ }
49
+
50
+ // Strategy 2: Recently edited files
51
+ try {
52
+ const recentFiles = this.getRecentlyEditedFiles(project)
53
+ for (const p of recentFiles) filePaths.add(p)
54
+ } catch (err) {
55
+ this.logger.debug({ err }, 'Strategy 2 (recent files) failed')
56
+ }
57
+
58
+ // Strategy 3: Symbol name matching (only when codeDb available)
59
+ if (this.codeDb) {
60
+ try {
61
+ const symbolMatches = this.matchSymbols(content, project)
62
+ for (const match of symbolMatches) {
63
+ filePaths.add(match.filePath)
64
+ symbols.add(match.symbol)
65
+ }
66
+ } catch (err) {
67
+ this.logger.debug({ err }, 'Strategy 3 (symbol matching) failed')
68
+ }
69
+ }
70
+
71
+ if (filePaths.size === 0 && symbols.size === 0) {
72
+ return []
73
+ }
74
+
75
+ // Update the observation with linked paths and symbols
76
+ const pathsArray = [...filePaths]
77
+ const symbolsArray = [...symbols]
78
+
79
+ try {
80
+ this.memoryDb.prepare(
81
+ `UPDATE observations SET file_paths = ?, symbols = ?, updated_at = ? WHERE id = ?`
82
+ ).run(
83
+ JSON.stringify(pathsArray),
84
+ JSON.stringify(symbolsArray),
85
+ new Date().toISOString(),
86
+ observationId
87
+ )
88
+
89
+ this.logger.debug(
90
+ { observationId, paths: pathsArray.length, symbols: symbolsArray.length },
91
+ 'Observation linked to code'
92
+ )
93
+ } catch (err) {
94
+ this.logger.debug({ err, observationId }, 'Failed to update observation with code links')
95
+ }
96
+
97
+ return pathsArray
98
+ }
99
+
100
+ /**
101
+ * Strategy 1: Extract explicit file paths from content.
102
+ */
103
+ private extractFilePaths(content: string): string[] {
104
+ const paths: string[] = []
105
+ let match: RegExpExecArray | null
106
+
107
+ // Reset regex state
108
+ FILE_PATH_REGEX.lastIndex = 0
109
+ while ((match = FILE_PATH_REGEX.exec(content)) !== null) {
110
+ paths.push(match[1])
111
+ }
112
+
113
+ return [...new Set(paths)]
114
+ }
115
+
116
+ /**
117
+ * Strategy 2: Get recently edited files from activity_log.
118
+ * Gracefully degrades if the table doesn't exist or has a different schema.
119
+ */
120
+ private getRecentlyEditedFiles(project: string): string[] {
121
+ try {
122
+ const rows = this.memoryDb.prepare(`
123
+ SELECT DISTINCT json_extract(metadata, '$.file_path') as file_path
124
+ FROM activity_log
125
+ WHERE project = ?
126
+ AND tool_name IN ('Write', 'Edit')
127
+ AND json_extract(metadata, '$.file_path') IS NOT NULL
128
+ ORDER BY created_at DESC
129
+ LIMIT 5
130
+ `).all(project) as { file_path: string }[]
131
+
132
+ return rows.map(r => r.file_path).filter(Boolean)
133
+ } catch {
134
+ // activity_log table may not exist — graceful degradation
135
+ return []
136
+ }
137
+ }
138
+
139
+ /**
140
+ * Strategy 3: Match potential symbol names from content against code_symbols.
141
+ */
142
+ private matchSymbols(content: string, project: string): { symbol: string; filePath: string }[] {
143
+ if (!this.codeDb) return []
144
+
145
+ // Extract candidate symbols from content
146
+ const candidates = new Set<string>()
147
+ let match: RegExpExecArray | null
148
+
149
+ SYMBOL_REGEX.lastIndex = 0
150
+ while ((match = SYMBOL_REGEX.exec(content)) !== null) {
151
+ if (candidates.size >= MAX_SYMBOL_CANDIDATES) break
152
+ candidates.add(match[1])
153
+ }
154
+
155
+ if (candidates.size === 0) return []
156
+
157
+ // Query code_symbols for matches
158
+ const results: { symbol: string; filePath: string }[] = []
159
+ const placeholders = [...candidates].map(() => '?').join(', ')
160
+
161
+ try {
162
+ const rows = this.codeDb.prepare(`
163
+ SELECT DISTINCT symbol_name, file_path
164
+ FROM code_symbols
165
+ WHERE project = ? AND symbol_name IN (${placeholders})
166
+ LIMIT 20
167
+ `).all(project, ...candidates) as { symbol_name: string; file_path: string }[]
168
+
169
+ for (const row of rows) {
170
+ results.push({ symbol: row.symbol_name, filePath: row.file_path })
171
+ }
172
+ } catch (err) {
173
+ this.logger.debug({ err }, 'Symbol matching query failed')
174
+ }
175
+
176
+ return results
177
+ }
178
+ }