claude-brain 0.30.2 → 0.30.3

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Files changed (236) hide show
  1. package/README.md +241 -191
  2. package/VERSION +1 -1
  3. package/assets/CLAUDE-unified.md +11 -11
  4. package/assets/CLAUDE.md +29 -29
  5. package/package.json +7 -3
  6. package/packs/backend/node.json +173 -173
  7. package/packs/core/javascript.json +176 -176
  8. package/packs/core/typescript.json +222 -222
  9. package/packs/frontend/react.json +254 -254
  10. package/packs/meta/testing.json +172 -172
  11. package/scripts/postinstall.mjs +531 -531
  12. package/src/automation/decision-detector.ts +452 -452
  13. package/src/automation/phase12-manager.ts +456 -456
  14. package/src/automation/proactive-recall.ts +373 -373
  15. package/src/automation/project-detector.ts +310 -310
  16. package/src/automation/repo-scanner.ts +210 -205
  17. package/src/cli/auto-setup.ts +75 -75
  18. package/src/cli/auto-start.ts +266 -266
  19. package/src/cli/bin.ts +264 -264
  20. package/src/cli/commands/autostart.ts +90 -90
  21. package/src/cli/commands/chroma.ts +578 -577
  22. package/src/cli/commands/export-training.ts +70 -70
  23. package/src/cli/commands/export.ts +130 -130
  24. package/src/cli/commands/git-hook.ts +183 -183
  25. package/src/cli/commands/hooks.ts +217 -217
  26. package/src/cli/commands/init.ts +123 -123
  27. package/src/cli/commands/install-mcp.ts +122 -111
  28. package/src/cli/commands/models.ts +979 -979
  29. package/src/cli/commands/pack.ts +200 -200
  30. package/src/cli/commands/refresh.ts +344 -339
  31. package/src/cli/commands/reindex.ts +120 -120
  32. package/src/cli/commands/serve.ts +466 -463
  33. package/src/cli/commands/start.ts +44 -44
  34. package/src/cli/commands/status.ts +220 -203
  35. package/src/cli/commands/uninstall-mcp.ts +45 -41
  36. package/src/cli/commands/update.ts +130 -124
  37. package/src/cli/migrate-chroma.ts +106 -106
  38. package/src/cli/ui/animations.ts +80 -80
  39. package/src/cli/ui/components.ts +82 -82
  40. package/src/cli/ui/index.ts +4 -4
  41. package/src/cli/ui/logo.ts +36 -36
  42. package/src/cli/ui/theme.ts +55 -55
  43. package/src/code-intelligence/indexer.ts +352 -352
  44. package/src/code-intelligence/linker.ts +178 -178
  45. package/src/code-intelligence/parser.ts +484 -484
  46. package/src/code-intelligence/query.ts +291 -291
  47. package/src/code-intelligence/schema.ts +83 -83
  48. package/src/code-intelligence/types.ts +95 -95
  49. package/src/config/defaults.ts +52 -52
  50. package/src/config/home.ts +56 -56
  51. package/src/config/index.ts +5 -5
  52. package/src/config/loader.ts +192 -192
  53. package/src/config/schema.ts +446 -415
  54. package/src/config/validator.ts +182 -182
  55. package/src/context/assembler.ts +407 -400
  56. package/src/context/index.ts +79 -79
  57. package/src/context/progress-tracker.ts +174 -174
  58. package/src/context/standards-manager.ts +287 -287
  59. package/src/context/validator.ts +58 -58
  60. package/src/diagnostics/index.ts +122 -121
  61. package/src/health/index.ts +233 -232
  62. package/src/hooks/brain-hook.ts +134 -131
  63. package/src/hooks/capture.ts +168 -168
  64. package/src/hooks/claude-code-mastery.md +112 -112
  65. package/src/hooks/context-hook.ts +260 -245
  66. package/src/hooks/deduplicator.ts +72 -72
  67. package/src/hooks/git-capture.ts +109 -109
  68. package/src/hooks/git-hook-installer.ts +211 -207
  69. package/src/hooks/index.ts +20 -20
  70. package/src/hooks/installer.ts +306 -288
  71. package/src/hooks/interceptor-hook.ts +204 -201
  72. package/src/hooks/passive-classifier.ts +397 -397
  73. package/src/hooks/queue.ts +160 -129
  74. package/src/hooks/session-tracker.ts +312 -312
  75. package/src/hooks/types.ts +52 -52
  76. package/src/index.ts +7 -7
  77. package/src/intelligence/cross-project/generalizer.ts +283 -283
  78. package/src/intelligence/cross-project/index.ts +7 -7
  79. package/src/intelligence/hf-downloader.ts +222 -222
  80. package/src/intelligence/hf-manifest.json +78 -78
  81. package/src/intelligence/index.ts +24 -24
  82. package/src/intelligence/inference-router.ts +762 -762
  83. package/src/intelligence/model-manager.ts +263 -245
  84. package/src/intelligence/optimization/index.ts +10 -10
  85. package/src/intelligence/optimization/precompute.ts +202 -202
  86. package/src/intelligence/optimization/semantic-cache.ts +213 -207
  87. package/src/intelligence/prediction/index.ts +7 -7
  88. package/src/intelligence/prediction/recommender.ts +276 -268
  89. package/src/intelligence/reasoning/chain-retrieval.ts +243 -247
  90. package/src/intelligence/reasoning/index.ts +7 -7
  91. package/src/intelligence/temporal/evolution.ts +193 -197
  92. package/src/intelligence/temporal/index.ts +16 -16
  93. package/src/intelligence/temporal/query-processor.ts +190 -190
  94. package/src/intelligence/temporal/timeline.ts +272 -259
  95. package/src/intelligence/temporal/trends.ts +263 -263
  96. package/src/intelligence/tokenizer.ts +118 -118
  97. package/src/knowledge/entity-extractor.ts +447 -443
  98. package/src/knowledge/graph/builder.ts +185 -185
  99. package/src/knowledge/graph/linker.ts +201 -201
  100. package/src/knowledge/graph/memory-graph.ts +359 -359
  101. package/src/knowledge/graph/schema.ts +99 -99
  102. package/src/knowledge/graph/search.ts +166 -166
  103. package/src/knowledge/relationship-extractor.ts +108 -108
  104. package/src/memory/chroma/client.ts +211 -192
  105. package/src/memory/chroma/collection-manager.ts +92 -92
  106. package/src/memory/chroma/config.ts +57 -57
  107. package/src/memory/chroma/embeddings.ts +177 -175
  108. package/src/memory/chroma/index.ts +82 -82
  109. package/src/memory/chroma/migration.ts +270 -270
  110. package/src/memory/chroma/schemas.ts +69 -69
  111. package/src/memory/chroma/search.ts +319 -315
  112. package/src/memory/chroma/store.ts +755 -747
  113. package/src/memory/compression.ts +121 -121
  114. package/src/memory/consolidation/archiver.ts +162 -165
  115. package/src/memory/consolidation/merger.ts +182 -186
  116. package/src/memory/consolidation/scorer.ts +136 -136
  117. package/src/memory/database.ts +9 -0
  118. package/src/memory/dual-write.ts +145 -0
  119. package/src/memory/embeddings.ts +226 -226
  120. package/src/memory/episodic/detector.ts +108 -108
  121. package/src/memory/episodic/manager.ts +347 -351
  122. package/src/memory/episodic/summarizer.ts +179 -179
  123. package/src/memory/episodic/types.ts +52 -52
  124. package/src/memory/fts5-search.ts +692 -633
  125. package/src/memory/index.ts +943 -1060
  126. package/src/memory/migrations/add-fts5.ts +118 -108
  127. package/src/memory/patterns.ts +438 -438
  128. package/src/memory/pruning.ts +60 -60
  129. package/src/memory/schema.ts +88 -88
  130. package/src/memory/store.ts +911 -787
  131. package/src/orchestrator/handlers/decision-handler.ts +204 -204
  132. package/src/packs/index.ts +9 -9
  133. package/src/packs/loader.ts +134 -134
  134. package/src/packs/manager.ts +204 -204
  135. package/src/packs/ranker.ts +78 -78
  136. package/src/packs/types.ts +81 -81
  137. package/src/phase12/index.ts +5 -5
  138. package/src/retrieval/bm25/index.ts +300 -297
  139. package/src/retrieval/bm25/tokenizer.ts +184 -184
  140. package/src/retrieval/feedback/adaptive.ts +221 -221
  141. package/src/retrieval/feedback/index.ts +16 -16
  142. package/src/retrieval/feedback/metrics.ts +221 -221
  143. package/src/retrieval/feedback/store.ts +283 -283
  144. package/src/retrieval/fusion/index.ts +194 -194
  145. package/src/retrieval/fusion/rrf.ts +165 -165
  146. package/src/retrieval/index.ts +12 -12
  147. package/src/retrieval/pipeline.ts +375 -375
  148. package/src/retrieval/query/expander.ts +203 -203
  149. package/src/retrieval/query/index.ts +27 -27
  150. package/src/retrieval/query/intent-classifier.ts +252 -252
  151. package/src/retrieval/query/temporal-parser.ts +295 -295
  152. package/src/retrieval/reranker/index.ts +189 -188
  153. package/src/retrieval/reranker/model.ts +99 -95
  154. package/src/retrieval/service.ts +125 -125
  155. package/src/retrieval/types.ts +162 -162
  156. package/src/routing/entity-extractor.ts +454 -454
  157. package/src/routing/handlers/exploration-handler.ts +369 -0
  158. package/src/routing/handlers/index.ts +19 -0
  159. package/src/routing/handlers/memory-handler.ts +273 -0
  160. package/src/routing/handlers/mutation-handler.ts +241 -0
  161. package/src/routing/handlers/recall-handler.ts +642 -0
  162. package/src/routing/handlers/shared.ts +515 -0
  163. package/src/routing/handlers/types.ts +48 -0
  164. package/src/routing/intent-classifier.ts +552 -552
  165. package/src/routing/response-filter.ts +399 -391
  166. package/src/routing/router.ts +245 -2193
  167. package/src/routing/search-engine.ts +521 -514
  168. package/src/routing/types.ts +104 -94
  169. package/src/scripts/health-check.ts +118 -118
  170. package/src/scripts/setup.ts +122 -122
  171. package/src/server/auto-updater.ts +283 -276
  172. package/src/server/handlers/call-tool.ts +159 -159
  173. package/src/server/handlers/list-tools.ts +35 -35
  174. package/src/server/handlers/tools/auto-remember.ts +165 -165
  175. package/src/server/handlers/tools/brain.ts +86 -86
  176. package/src/server/handlers/tools/create-project.ts +135 -135
  177. package/src/server/handlers/tools/get-code-standards.ts +123 -123
  178. package/src/server/handlers/tools/get-corrections.ts +152 -152
  179. package/src/server/handlers/tools/get-patterns.ts +156 -156
  180. package/src/server/handlers/tools/get-project-context.ts +75 -75
  181. package/src/server/handlers/tools/index.ts +30 -30
  182. package/src/server/handlers/tools/init-project.ts +756 -756
  183. package/src/server/handlers/tools/list-projects.ts +126 -126
  184. package/src/server/handlers/tools/recall-similar.ts +87 -87
  185. package/src/server/handlers/tools/recognize-pattern.ts +132 -132
  186. package/src/server/handlers/tools/record-correction.ts +131 -131
  187. package/src/server/handlers/tools/remember-decision.ts +168 -168
  188. package/src/server/handlers/tools/schemas.ts +179 -179
  189. package/src/server/handlers/tools/search-code.ts +122 -122
  190. package/src/server/handlers/tools/smart-context.ts +146 -146
  191. package/src/server/handlers/tools/update-progress.ts +131 -131
  192. package/src/server/http-api.ts +215 -1229
  193. package/src/server/mcp-proxy.ts +85 -84
  194. package/src/server/mcp-server.ts +285 -284
  195. package/src/server/middleware/auth.ts +39 -0
  196. package/src/server/middleware/error-handler.ts +37 -0
  197. package/src/server/middleware/rate-limit.ts +53 -0
  198. package/src/server/middleware/validate.ts +42 -0
  199. package/src/server/pid-manager.ts +137 -136
  200. package/src/server/providers/resources.ts +581 -581
  201. package/src/server/routes/code.ts +228 -0
  202. package/src/server/routes/context.ts +26 -0
  203. package/src/server/routes/health.ts +19 -0
  204. package/src/server/routes/helpers.ts +100 -0
  205. package/src/server/routes/hooks.ts +197 -0
  206. package/src/server/routes/mcp.ts +47 -0
  207. package/src/server/routes/memory.ts +397 -0
  208. package/src/server/routes/models.ts +96 -0
  209. package/src/server/routes/projects.ts +89 -0
  210. package/src/server/routes/types.ts +21 -0
  211. package/src/server/schemas/api-schemas.ts +202 -0
  212. package/src/server/services.ts +720 -720
  213. package/src/server/utils/memory-indicator.ts +84 -84
  214. package/src/server/utils/response-formatter.ts +129 -129
  215. package/src/server/web-viewer.ts +1145 -1115
  216. package/src/setup/index.ts +38 -38
  217. package/src/tools/registry.ts +115 -115
  218. package/src/tools/schemas.ts +666 -666
  219. package/src/tools/types.ts +412 -412
  220. package/src/training/data-store.ts +320 -298
  221. package/src/training/retrain-pipeline.ts +399 -394
  222. package/src/utils/error-handler.ts +136 -136
  223. package/src/utils/index.ts +58 -58
  224. package/src/utils/kill-port.ts +55 -53
  225. package/src/utils/phase12-helper.ts +56 -56
  226. package/src/utils/safe-path.ts +43 -0
  227. package/src/utils/timing.ts +47 -47
  228. package/src/utils/transaction.ts +63 -63
  229. package/src/vault/index.ts +4 -3
  230. package/src/vault/paths.ts +106 -106
  231. package/src/vault/query.ts +4 -1
  232. package/src/vault/reader.ts +44 -1
  233. package/src/vault/watcher.ts +24 -1
  234. package/src/vault/writer.ts +487 -413
  235. package/skills/persistent-memory/SKILL.md +0 -148
  236. package/skills/persistent-memory/references/tool-reference.md +0 -90
@@ -1,148 +0,0 @@
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- ---
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- name: persistent-memory
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- description: Persistent memory management for Claude sessions using the brain MCP tool. Use when starting a work session, making architectural decisions, learning from mistakes, ending a session, or when user says "remember this", "what do I know about", "recall", "brain", or "session summary". Also use when searching code symbols, files, or dependencies with search_code.
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- license: MIT
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- metadata:
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- author: claude-brain
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- version: 1.0.0
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- mcp-server: claude-brain
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- category: productivity
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- tags: [memory, persistence, decisions, context, code-intelligence]
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- ---
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-
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- # Persistent Memory
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-
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- Manage persistent memory across Claude sessions using the `brain` and `search_code` MCP tools. Memory persists between conversations — decisions, lessons, and context survive session boundaries.
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-
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- ## Critical Rules
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-
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- - The `brain` tool auto-classifies intent. Most of the time, just pass a natural language message — don't force an action unless you have a reason.
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- - Do NOT store file paths, "read file X" events, or progress like "ran tests" — these are too granular and captured automatically by hooks.
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- - DO store the WHY — reasoning behind decisions, user preferences, lessons learned from debugging.
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- - Use the `project` parameter to scope memories to the right project. If omitted, it's auto-detected from the message.
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-
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- ## Session Workflow
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-
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- ### Step 1: Session Start — Recall Context
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-
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- At the beginning of significant work, recall what you know:
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-
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- ```
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- brain("What do I know about this project?")
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- ```
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-
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- This returns past decisions, preferences, patterns, and lessons. Use it to avoid re-asking questions the user already answered in previous sessions.
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-
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- Expected output: A summary of stored memories with relevance scores.
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-
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- ### Step 2: During Work — Store Decisions and Lessons
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-
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- Store when you encounter something worth remembering:
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-
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- **Decisions:**
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- ```
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- brain("Decided to use JWT over sessions because the app is stateless")
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- ```
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-
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- **Mistakes and fixes:**
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- ```
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- brain("The bug was caused by missing CORS credentials — fixed with credentials: include")
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- ```
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-
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- **User preferences:**
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- ```
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- brain("User prefers explicit error messages over generic 500s")
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- ```
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-
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- **Architecture changes:**
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- ```
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- brain("Changed database from MySQL to Postgres for better JSON support")
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- ```
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-
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- ### Step 3: Session End — Summarize
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-
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- Before finishing significant work, store a 2-3 sentence summary:
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-
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- ```
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- brain("Session summary: Built auth flow for expense tracker. Chose JWT for stateless architecture. Hit CORS issue on /api/login, fixed with credentials: include.")
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- ```
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-
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- ## Using search_code
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-
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- The `search_code` tool searches indexed code — faster than grep for large projects.
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-
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- **Search symbols (functions, classes, types):**
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- ```
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- search_code({ query: "handleAuth", project: "my-app" })
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- ```
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-
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- **Search files by name:**
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- ```
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- search_code({ query: "config", project: "my-app", type: "files" })
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- ```
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-
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- **Show dependencies of a file:**
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- ```
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- search_code({ query: "deps", project: "my-app", type: "dependencies", file_path: "src/auth.ts" })
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- ```
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-
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- If search returns no results, the project may need indexing. Run `claude-brain reindex` first.
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-
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- ## Advanced Patterns
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-
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- ### Updating Past Memories
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- When a previous decision changes:
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- ```
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- brain({ message: "Changed my mind — use Postgres instead of MySQL", action: "update" })
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- ```
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-
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- ### Getting Full Details
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- Search returns compact summaries. For the full stored content:
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- ```
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- brain("details 42")
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- ```
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- where 42 is the memory ID from a previous search result.
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-
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- ### Deleting Outdated Memories
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- ```
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- brain({ message: "delete memory about MySQL choice", action: "delete" })
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- ```
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-
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- ### Scoping to Projects
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- Always pass the project name for multi-project work:
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- ```
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- brain({ message: "Chose Tailwind for styling", project: "expense-tracker" })
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- ```
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-
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- ## What to Store vs. Skip
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-
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- ### Store These
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- - Architectural decisions and their reasoning
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- - User preferences for tools, style, workflow
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- - Solutions to hard debugging problems
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- - Patterns confirmed across multiple sessions
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- - Key file paths and project structure insights
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-
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- ### Skip These
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- - File read/write events (captured by hooks)
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- - "Ran tests" / "built successfully" (too granular)
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- - Anything already in CLAUDE.md or the codebase
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- - Speculative conclusions from reading a single file
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-
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- ## Troubleshooting
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-
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- ### brain tool returns "no relevant memories"
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- **Cause:** No memories stored yet, or query doesn't match stored content.
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- **Solution:** Try broader phrasing. Use `brain("list all memories for project X")` to see what's stored.
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-
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- ### search_code returns empty results
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- **Cause:** Project not indexed.
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- **Solution:** Run `claude-brain reindex` in terminal, then retry.
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-
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- ### Memories scoped to wrong project
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- **Cause:** Project name not specified or auto-detected incorrectly.
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- **Solution:** Always pass `project` parameter explicitly for multi-project work.
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-
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- ### brain tool seems slow
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- **Cause:** Large memory database or complex semantic search.
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- **Solution:** Use more specific queries. Scope to a project to narrow search space.
@@ -1,90 +0,0 @@
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- # Tool Reference
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-
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- Complete parameter reference for the brain and search_code MCP tools.
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-
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- ## brain
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-
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- Your persistent memory. Tell it decisions, ask it questions, or update/delete past notes.
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-
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- ### Parameters
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-
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- | Parameter | Type | Required | Description |
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- |-----------|------|----------|-------------|
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- | `message` | string | Yes | What you are doing, decided, learned, or need. Natural language. |
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- | `project` | string | No | Project name to scope memories (e.g., "my-app"). Auto-detected if omitted. |
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- | `action` | enum | No | Force action: `auto`, `store`, `recall`, `update`, `delete`. Default: `auto`. |
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-
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- ### Intent Classification
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-
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- When `action` is `auto` (default), the tool classifies your message into one of these intents:
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-
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- - **session_start** — "What do I know about X?" / beginning of session
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- - **decision_made** — "Decided to use X because Y"
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- - **store_this** — "Remember that..." / storing information
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- - **pattern_found** — "I noticed a pattern where..."
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- - **mistake_learned** — "The bug was X, fixed by Y"
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- - **question** — "What was the reason for X?"
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- - **context_needed** — Requesting stored context
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- - **update_memory** — Changing a previous memory
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- - **delete_memory** — Removing a memory
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- - **detail_request** — "details {ID}" for full content
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- - **list_all** — "list all memories" / "show everything"
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- - **timeline** — "show history" / "what happened when"
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- - **comparison** — "compare X vs Y decisions"
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- - **exploration** — Open-ended exploration of stored knowledge
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- - **progress_update** — "Completed X, next steps Y"
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-
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- ### Response Format
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-
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- ```json
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- {
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- "action": "stored | retrieved | updated | deleted | none",
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- "summary": "Brief description of what happened",
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- "content": "Full response with details",
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- "relevantItems": 5
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- }
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- ```
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-
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- ## search_code
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-
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- Search indexed code for symbols, files, or dependencies. Faster than grep for indexed projects.
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-
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- ### Parameters
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-
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- | Parameter | Type | Required | Default | Description |
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- |-----------|------|----------|---------|-------------|
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- | `query` | string | Yes | — | Symbol name, file name, or search term |
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- | `project` | string | Yes | — | Project name (usually directory name) |
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- | `type` | enum | No | `symbols` | `symbols`, `files`, or `dependencies` |
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- | `file_path` | string | No* | — | Required when type is `dependencies` |
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- | `limit` | number | No | 20 | Max results (1-100) |
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-
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- ### Search Types
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-
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- **symbols** (default): Search functions, classes, types, interfaces by name.
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- ```
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- search_code({ query: "UserService", project: "my-app" })
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- ```
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-
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- **files**: Search for files by name pattern.
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- ```
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- search_code({ query: "middleware", project: "my-app", type: "files" })
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- ```
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-
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- **dependencies**: Show imports and imported-by for a specific file.
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- ```
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- search_code({ query: "deps", project: "my-app", type: "dependencies", file_path: "src/auth/service.ts" })
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- ```
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-
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- ### Supported File Types
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-
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- `.ts .tsx .js .jsx .mjs .cjs .py .go .rs .vue .html .css .json .yaml .yml`
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-
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- ### Indexing
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-
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- If search returns no results, the project needs indexing:
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- ```bash
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- claude-brain reindex
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- ```
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-
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- This parses the codebase using tree-sitter and stores symbols in SQLite for fast lookup.