boost.cxx 0.0.2 → 1.90.1

package/boost/numeric/odeint/external/mtl4/implicit_euler_mtl4.hpp

@@ -0,0 +1,161 @@
+/*
+[begin_description]
+Modification of the implicit Euler method, works with the MTL4 matrix library only. 
+[end_description]
+
+Copyright 2012-2013 Andreas Angelopoulos
+Copyright 2012-2013 Karsten Ahnert
+Copyright 2012-2013 Mario Mulansky
+
+Distributed under the Boost Software License, Version 1.0.
+(See accompanying file LICENSE_1_0.txt or
+copy at http://www.boost.org/LICENSE_1_0.txt)
+*/
+
+
+#ifndef BOOST_NUMERIC_ODEINT_EXTERNAL_IMPLICIT_EULER_MTL4_HPP_INCLUDED
+#define BOOST_NUMERIC_ODEINT_EXTERNAL_IMPLICIT_EULER_MTL4_HPP_INCLUDED
+
+
+#include <utility>
+
+#include <boost/numeric/odeint/util/bind.hpp>
+#include <boost/numeric/odeint/util/unwrap_reference.hpp>
+#include <boost/numeric/odeint/stepper/stepper_categories.hpp>
+
+#include <boost/numeric/odeint/external/mtl4/mtl4_resize.hpp>
+
+#include <boost/numeric/mtl/mtl.hpp>
+#include <boost/numeric/itl/itl.hpp>
+
+
+
+
+namespace boost {
+namespace numeric {
+namespace odeint {
+
+
+template< class ValueType , class Resizer = initially_resizer >
+class implicit_euler_mtl4
+{
+
+public:
+
+    typedef ValueType value_type;
+    typedef value_type time_type;
+    typedef mtl::dense_vector<value_type> state_type;
+
+    typedef state_wrapper< state_type > wrapped_state_type;
+    typedef state_type deriv_type;
+    typedef state_wrapper< deriv_type > wrapped_deriv_type;
+    typedef mtl::compressed2D< value_type > matrix_type;
+    typedef state_wrapper< matrix_type > wrapped_matrix_type;
+
+    typedef Resizer resizer_type;
+    typedef stepper_tag stepper_category;
+
+    typedef implicit_euler_mtl4< ValueType , Resizer > stepper_type;
+
+
+    implicit_euler_mtl4( const value_type epsilon = 1E-6 )
+        : m_epsilon( epsilon ) , m_resizer() ,
+          m_dxdt() , m_x() ,
+          m_identity() , m_jacobi()
+    { }
+
+
+    template< class System >
+    void do_step( System system , state_type &x , time_type t , time_type dt )
+    {
+        typedef typename odeint::unwrap_reference< System >::type system_type;
+        typedef typename odeint::unwrap_reference< typename system_type::first_type >::type deriv_func_type;
+        typedef typename odeint::unwrap_reference< typename system_type::second_type >::type jacobi_func_type;
+        system_type &sys = system;
+        deriv_func_type &deriv_func = sys.first;
+        jacobi_func_type &jacobi_func = sys.second;
+
+        m_resizer.adjust_size(x, [this](auto&& arg) { return this->resize_impl<StateIn>(std::forward<decltype(arg)>(arg)); });
+
+        m_identity.m_v = 1;
+
+        t += dt;
+        m_x.m_v = x;
+
+        deriv_func( x , m_dxdt.m_v , t );
+        jacobi_func( x , m_jacobi.m_v , t );
+
+
+        m_dxdt.m_v *= -dt;
+
+        m_jacobi.m_v *= dt;
+        m_jacobi.m_v -= m_identity.m_v ;
+
+
+
+        // using ilu_0 preconditioning -incomplete LU factorisation
+        // itl::pc::diagonal<matrix_type,double> L(m_jacobi.m_v);
+        itl::pc::ilu_0<matrix_type> L( m_jacobi.m_v );
+
+        solve( m_jacobi.m_v , m_x.m_v , m_dxdt.m_v , L );
+        x+= m_x.m_v;
+
+
+    }
+
+
+    template< class StateType >
+    void adjust_size( const StateType &x )
+    {
+        resize_impl( x );
+    }
+
+
+private:
+
+
+    /*
+      Applying approximate iterative linear solvers
+      default solver is Biconjugate gradient stabilized method
+      itl::bicgstab(A, x, b, L, iter);
+    */
+    template < class LinearOperator, class HilbertSpaceX, class HilbertSpaceB, class Preconditioner>
+    void solve(const LinearOperator& A, HilbertSpaceX& x, const HilbertSpaceB& b,
+               const Preconditioner& L, int max_iteractions =500)
+    {
+        // Termination criterion: r < 1e-6 * b or N iterations
+        itl::basic_iteration< double > iter( b , max_iteractions , 1e-6 );
+        itl::bicgstab( A , x , b , L , iter );
+
+    }
+
+
+    template< class StateIn >
+    bool resize_impl( const StateIn &x )
+    {
+        bool resized = false;
+        resized |= adjust_size_by_resizeability( m_dxdt , x , typename is_resizeable<deriv_type>::type() );
+        resized |= adjust_size_by_resizeability( m_x , x , typename is_resizeable<state_type>::type() );
+        resized |= adjust_size_by_resizeability( m_identity , x , typename is_resizeable<matrix_type>::type() );
+        resized |= adjust_size_by_resizeability( m_jacobi , x , typename is_resizeable<matrix_type>::type() );
+        return resized;
+    }
+
+
+private:
+
+    value_type m_epsilon;
+    resizer_type m_resizer;
+    wrapped_deriv_type m_dxdt;
+    wrapped_state_type m_x;
+    wrapped_matrix_type m_identity;
+    wrapped_matrix_type m_jacobi;
+};
+
+
+} // odeint
+} // numeric
+} // boost
+
+
+#endif // BOOST_NUMERIC_ODEINT_EXTERNAL_IMPLICIT_EULER_MTL4_HPP_INCLUDED

package/boost/numeric/odeint/external/mtl4/mtl4.hpp

@@ -0,0 +1,23 @@
+/*
+ [auto_generated]
+ /boost/numeric/odeint/external/mtl4/mtl4.hpp
+
+ [begin_description]
+ includes all headers required for using mtl4 with odeint
+ [end_description]
+
+ Copyright 2013 Karsten Ahnert
+ Copyright 2013 Mario Mulansky
+
+ Distributed under the Boost Software License, Version 1.0.
+ (See accompanying file LICENSE_1_0.txt or
+ copy at http://www.boost.org/LICENSE_1_0.txt)
+ */
+
+#ifndef BOOST_NUMERIC_ODEINT_EXTERNAL_MTL4_MTL4_HPP_INCLUDED
+#define BOOST_NUMERIC_ODEINT_EXTERNAL_MTL4_MTL4_HPP_INCLUDED
+
+#include <boost/numeric/odeint/external/mtl4/mtl4_algebra_dispatcher.hpp>
+#include <boost/numeric/odeint/external/mtl4/mtl4_resize.hpp>
+
+#endif // BOOST_NUMERIC_ODEINT_EXTERNAL_MTL4_MTL4_INCLUDED

package/boost/numeric/odeint/external/mtl4/mtl4_algebra_dispatcher.hpp

@@ -0,0 +1,99 @@
+/*
+ [auto_generated]
+ boost/numeric/odeint/external/mtl4/mtl4_algebra_dispatcher.hpp
+
+ [begin_description]
+ specialization of the algebra dispatcher for mtl4
+ [end_description]
+
+ Copyright 2013 Karsten Ahnert
+ Copyright 2013 Mario Mulansky
+
+ Distributed under the Boost Software License, Version 1.0.
+ (See accompanying file LICENSE_1_0.txt or
+ copy at http://www.boost.org/LICENSE_1_0.txt)
+ */
+
+#ifndef BOOST_NUMERIC_ODEINT_MTL4_MTL4_ALGEBRA_DISPATCHER_HPP_INCLUDED
+#define BOOST_NUMERIC_ODEINT_MTL4_MTL4_ALGEBRA_DISPATCHER_HPP_INCLUDED
+
+#include <boost/numeric/mtl/mtl.hpp>
+
+#include <boost/numeric/odeint/algebra/vector_space_algebra.hpp>
+#include <boost/numeric/odeint/algebra/algebra_dispatcher.hpp>
+
+namespace boost {
+namespace numeric {
+namespace odeint {
+
+template<typename Value, typename Parameters>
+struct algebra_dispatcher< mtl::dense_vector< Value , Parameters > >
+{
+    typedef vector_space_algebra algebra_type;
+};
+
+template<typename Value, typename Parameters>
+struct algebra_dispatcher< mtl::dense2D< Value , Parameters > >
+{
+    typedef vector_space_algebra algebra_type;
+};
+
+template<typename Value , size_t BitMask , typename Parameters>
+struct algebra_dispatcher< mtl::morton_dense< Value , BitMask, Parameters > >
+{
+    typedef vector_space_algebra algebra_type;
+};
+
+template<typename Value, typename Parameters>
+struct algebra_dispatcher< mtl::compressed2D< Value , Parameters > >
+{
+    typedef vector_space_algebra algebra_type;
+};
+
+// specialization of infinity norm calculation
+
+template<typename Value, typename Parameters>
+struct vector_space_norm_inf< mtl::dense_vector< Value , Parameters > >
+{
+    typedef Value result_type;
+    Value operator()( const mtl::dense_vector< Value , Parameters > &x ) const
+    {
+        return mtl::infinity_norm(x);
+    }
+};
+
+template<typename Value, typename Parameters>
+struct vector_space_norm_inf< mtl::dense2D< Value , Parameters > >
+{
+    typedef Value result_type;
+    Value operator()( const mtl::dense2D< Value , Parameters > &x ) const
+    {
+        return mtl::infinity_norm(x);
+    }
+};
+
+template<typename Value , size_t BitMask , typename Parameters>
+struct vector_space_norm_inf< mtl::morton_dense< Value , BitMask , Parameters > >
+{
+    typedef Value result_type;
+    Value operator()( const mtl::morton_dense< Value , BitMask , Parameters > &x ) const
+    {
+        return mtl::infinity_norm(x);
+    }
+};
+
+template<typename Value, typename Parameters>
+struct vector_space_norm_inf< mtl::compressed2D< Value , Parameters > >
+{
+    typedef Value result_type;
+    Value operator()( const mtl::compressed2D< Value , Parameters > &x ) const
+    {
+        return mtl::infinity_norm(x);
+    }
+};
+
+}
+}
+}
+
+#endif // BOOST_NUMERIC_ODEINT_MTL4_MTL4_ALGEBRA_DISPATCHER_INCLUDED

package/boost/numeric/odeint/external/mtl4/mtl4_resize.hpp

@@ -0,0 +1,134 @@
+/*
+[begin_description]
+Modification of the implicit Euler method, works with the MTL4 matrix library only. 
+[end_description]
+
+Copyright 2012-2013 Andreas Angelopoulos
+Copyright 2012-2013 Karsten Ahnert
+Copyright 2012-2013 Mario Mulansky
+
+Distributed under the Boost Software License, Version 1.0.
+(See accompanying file LICENSE_1_0.txt or
+copy at http://www.boost.org/LICENSE_1_0.txt)
+*/
+
+
+#ifndef BOOST_NUMERIC_ODEINT_EXTERNAL_MTL4_RESIZE_HPP_INCLUDED
+#define BOOST_NUMERIC_ODEINT_EXTERNAL_MTL4_RESIZE_HPP_INCLUDED
+
+#include <boost/numeric/odeint/util/is_resizeable.hpp>
+#include <boost/numeric/odeint/util/resize.hpp>
+#include <boost/numeric/odeint/util/same_size.hpp>
+
+#include <boost/numeric/mtl/vector/dense_vector.hpp>
+#include <boost/numeric/mtl/matrix/dense2D.hpp>
+#include <boost/numeric/mtl/matrix/compressed2D.hpp>
+
+#include <type_traits>
+
+namespace boost {
+namespace numeric {
+namespace odeint {
+
+
+template< class Value , class Parameters >
+struct is_resizeable< mtl::dense_vector< Value , Parameters > >
+{ 
+    typedef std::true_type type;
+    const static bool value = type::value;
+};
+
+template< class Value , class Parameters >
+struct is_resizeable< mtl::dense2D< Value , Parameters > >
+{
+    typedef std::true_type type;
+    const static bool value = type::value;
+};
+
+template< class Value , class Parameters >
+struct is_resizeable< mtl::compressed2D< Value , Parameters > >
+{
+    typedef std::true_type type;
+    const static bool value = type::value;
+};
+
+
+
+
+template< class Value , class Parameters >
+struct same_size_impl< mtl::dense_vector< Value , Parameters > , mtl::dense_vector< Value , Parameters > >
+{
+    static bool same_size( const mtl::dense_vector< Value , Parameters > &v1 ,
+                           const mtl::dense_vector< Value , Parameters > &v2 )
+    {
+        return mtl::size( v1 ) == mtl::size( v2 );
+    }
+};
+
+template< class Value , class Parameters >
+struct resize_impl< mtl::dense_vector< Value , Parameters > , mtl::dense_vector< Value , Parameters > >
+{
+    static void resize( mtl::dense_vector< Value , Parameters > &v1 ,
+                        const mtl::dense_vector< Value , Parameters > &v2 )
+    {
+        v1.change_dim( mtl::size( v2 ) );
+    }
+};
+
+
+
+template< class Value , class MatrixParameters , class VectorParameters >
+struct same_size_impl< mtl::dense2D< Value , MatrixParameters > , mtl::dense_vector< Value , VectorParameters > >
+{
+    static bool same_size( const mtl::dense2D< Value , MatrixParameters > &m , 
+                           const mtl::dense_vector< Value , VectorParameters > &v )
+    {
+        return ( ( mtl::size( v ) == m.num_cols() ) && ( mtl::size( v ) == m.num_rows() ) );
+    }
+};
+
+template< class Value , class MatrixParameters , class VectorParameters >
+struct resize_impl< mtl::dense2D< Value , MatrixParameters > , mtl::dense_vector< Value , VectorParameters > >
+{
+    static void resize( mtl::dense2D< Value , MatrixParameters > &m , 
+                        const mtl::dense_vector< Value , VectorParameters > &v )
+    {
+        m.change_dim( mtl::size( v ) , mtl::size( v ) , false );
+    }
+};
+
+
+
+
+template< class Value , class MatrixParameters , class VectorParameters >
+struct same_size_impl< mtl::compressed2D< Value , MatrixParameters > , mtl::dense_vector< Value , VectorParameters > >
+{
+    static bool same_size( const mtl::compressed2D< Value , MatrixParameters > &m , 
+                           const mtl::dense_vector< Value , VectorParameters > &v )
+    {
+        return ( ( mtl::size( v ) == m.num_cols() ) && ( mtl::size( v ) == m.num_rows() ) );
+    }
+};
+
+template< class Value , class MatrixParameters , class VectorParameters >
+struct resize_impl< mtl::compressed2D< Value , MatrixParameters > , mtl::dense_vector< Value , VectorParameters > >
+{
+    static void resize( mtl::compressed2D< Value , MatrixParameters > &m , 
+                        const mtl::dense_vector< Value , VectorParameters > &v )
+    {
+        m.change_dim( mtl::size( v ) , mtl::size( v ) );
+    }
+};
+
+
+
+
+
+
+
+
+} // namespace odeint
+} // namespace numeric
+} // namespace boost
+
+#endif // BOOST_NUMERIC_ODEINT_EXTERNAL_MTL4_RESIZE_HPP_INCLUDED

package/boost/numeric/odeint/external/nt2/nt2_algebra_dispatcher.hpp

@@ -0,0 +1,25 @@
+//==============================================================================
+//         Copyright 2014          LRI    UMR 8623 CNRS/Univ Paris Sud XI
+//         Copyright 2014          NumScale SAS
+//
+//          Distributed under the Boost Software License, Version 1.0.
+//                 See accompanying file LICENSE.txt or copy at
+//                     http://www.boost.org/LICENSE_1_0.txt
+//==============================================================================
+#ifndef BOOST_NUMERIC_ODEINT_EXTERNAL_NT2_NT2_ALGEBRA_DISPATCHER_HPP_INCLUDED
+#define BOOST_NUMERIC_ODEINT_EXTERNAL_NT2_NT2_ALGEBRA_DISPATCHER_HPP_INCLUDED
+
+#include <nt2/core/container/table/table.hpp>
+
+#include <boost/numeric/odeint/algebra/vector_space_algebra.hpp>
+#include <boost/numeric/odeint/algebra/algebra_dispatcher.hpp>
+
+namespace boost { namespace numeric { namespace odeint {
+template<typename T, typename S>
+struct algebra_dispatcher<nt2::container::table<T,S> >
+{
+  typedef vector_space_algebra algebra_type;
+};
+} } }
+
+#endif

package/boost/numeric/odeint/external/nt2/nt2_copy.hpp

@@ -0,0 +1,33 @@
+//==============================================================================
+//         Copyright 2014          LASMEA UMR 6602 CNRS/Univ. Clermont II
+//         Copyright 2014          LRI    UMR 8623 CNRS/Univ Paris Sud XI
+//         Copyright 2014          MetaScale SAS
+//
+//          Distributed under the Boost Software License, Version 1.0.
+//                 See accompanying file LICENSE.txt or copy at
+//                     http://www.boost.org/LICENSE_1_0.txt
+//==============================================================================
+#ifndef BOOST_NUMERIC_ODEINT_EXTERNAL_NT2_NT2_COPY_HPP_INCLUDED
+#define BOOST_NUMERIC_ODEINT_EXTERNAL_NT2_NT2_COPY_HPP_INCLUDED
+
+#include <nt2/core/container/table/table.hpp>
+
+#include <boost/numeric/odeint/util/copy.hpp>
+
+namespace boost { namespace numeric { namespace odeint {
+
+template<typename T, typename S>
+struct copy_impl< nt2::container::table<T,S>
+                , nt2::container::table<T,S>
+                >
+{
+  static void copy ( const nt2::container::table<T,S> &v1
+                   , nt2::container::table<T,S> &v2
+                   )
+  {
+    v2 = v1;
+  }
+};
+} } }
+
+#endif

package/boost/numeric/odeint/external/nt2/nt2_norm_inf.hpp

@@ -0,0 +1,31 @@
+//==============================================================================
+//         Copyright 2014          LRI    UMR 8623 CNRS/Univ Paris Sud XI
+//         Copyright 2014          NumScale SAS
+//
+//          Distributed under the Boost Software License, Version 1.0.
+//                 See accompanying file LICENSE.txt or copy at
+//                     http://www.boost.org/LICENSE_1_0.txt
+//==============================================================================
+#ifndef BOOST_NUMERIC_ODEINT_EXTERNAL_NT2_NT2_NORM_INF_HPP_INCLUDED
+#define BOOST_NUMERIC_ODEINT_EXTERNAL_NT2_NT2_NORM_INF_HPP_INCLUDED
+
+#include <nt2/core/container/table/table.hpp>
+#include <nt2/include/functions/globalmax.hpp>
+#include <nt2/include/functions/abs.hpp>
+
+#include <boost/numeric/odeint/algebra/vector_space_algebra.hpp>
+
+namespace boost { namespace numeric { namespace odeint
+{
+  template<typename T, typename S>
+  struct vector_space_norm_inf<nt2::container::table<T,S> >
+  {
+    typedef T result_type;
+    result_type operator()(const nt2::container::table<T,S> &v1) const
+    {
+      return nt2::globalmax(nt2::abs(v1));
+    }
+  };
+} } }
+
+#endif

package/boost/numeric/odeint/external/nt2/nt2_resize.hpp

@@ -0,0 +1,54 @@
+//==============================================================================
+//         Copyright 2014          LRI    UMR 8623 CNRS/Univ Paris Sud XI
+//         Copyright 2014          NumScale SAS
+//
+//          Distributed under the Boost Software License, Version 1.0.
+//                 See accompanying file LICENSE.txt or copy at
+//                     http://www.boost.org/LICENSE_1_0.txt
+//==============================================================================
+#ifndef BOOST_NUMERIC_ODEINT_EXTERNAL_NT2_NT2_RESIZE_HPP_INCLUDED
+#define BOOST_NUMERIC_ODEINT_EXTERNAL_NT2_NT2_RESIZE_HPP_INCLUDED
+
+#include <nt2/core/container/table/table.hpp>
+
+#include <boost/numeric/odeint/util/same_size.hpp>
+
+#include <type_traits>
+
+namespace boost { namespace numeric { namespace odeint {
+
+template<typename T, typename S>
+struct is_resizeable< nt2::container::table<T,S> >
+{
+  typedef std::true_type type;
+  static const bool value = type::value;
+};
+
+template<typename T, typename S>
+struct same_size_impl< nt2::container::table<T,S>
+                     , nt2::container::table<T,S>
+                     >
+{
+  static bool same_size ( const nt2::container::table<T,S> &v1
+                        , const nt2::container::table<T,S> &v2
+                        )
+  {
+    return v1.extent() == v2.extent();
+  }
+};
+
+template<typename T, typename S>
+struct resize_impl< nt2::container::table<T,S>
+                  , nt2::container::table<T,S>
+                  >
+{
+  static void resize ( nt2::container::table<T,S> &v1
+                     , const nt2::container::table<T,S> &v2
+                     )
+  {
+    v1.resize( v2.extent() );
+  }
+};
+} } }
+
+#endif

package/boost/numeric/odeint/external/openmp/openmp.hpp

@@ -0,0 +1,31 @@
+/*
+ [auto_generated]
+ boost/numeric/odeint/external/openmp/openmp.hpp
+
+ [begin_description]
+ Wrappers for OpenMP.
+ [end_description]
+
+ Copyright 2013 Karsten Ahnert
+ Copyright 2013 Mario Mulansky
+ Copyright 2013 Pascal Germroth
+
+ Distributed under the Boost Software License, Version 1.0.
+ (See accompanying file LICENSE_1_0.txt or
+ copy at http://www.boost.org/LICENSE_1_0.txt)
+ */
+
+
+#ifndef BOOST_NUMERIC_ODEINT_EXTERNAL_OPENMP_OPENMP_HPP_INCLUDED
+#define BOOST_NUMERIC_ODEINT_EXTERNAL_OPENMP_OPENMP_HPP_INCLUDED
+
+// level 1: parallel iteration over random access container
+#include <boost/numeric/odeint/external/openmp/openmp_range_algebra.hpp>
+
+// level 2: split range state
+#include <boost/numeric/odeint/external/openmp/openmp_state.hpp>
+
+// level 3: process a random access container of sub-states in parallel
+#include <boost/numeric/odeint/external/openmp/openmp_nested_algebra.hpp>
+
+#endif