agentic-flow 2.0.7 → 3.0.0-alpha.2

package/dist/embeddings/neural-substrate.js.map

@@ -0,0 +1 @@
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* Neural Embedding Substrate Integration\n *\n * Wraps ruvector's NeuralSubstrate for agentic-flow agents\n * treating embeddings as a synthetic nervous system.\n *\n * Based on ruvector@0.1.85 neural-embeddings.ts\n */\n\nimport { getOptimizedEmbedder, cosineSimilarity, euclideanDistance } from './optimized-embedder.js';\n\n// ============================================================================\n// Security Constants\n// ============================================================================\n\nconst MAX_TEXT_LENGTH = 10000;      // Maximum input text length\nconst MAX_MEMORIES = 10000;          // Maximum memories in MemoryPhysics\nconst MAX_AGENTS = 1000;             // Maximum agents in swarm\nconst MAX_BASELINE_SAMPLES = 1000;   // Maximum calibration samples\nconst MAX_HISTORY_SIZE = 100;        // Maximum drift history\nconst VALID_ID_PATTERN = /^[a-zA-Z0-9_-]{1,256}$/;\n\n// ============================================================================\n// Security Validation Functions\n// ============================================================================\n\n/**\n * Validate text input length\n */\nfunction validateTextInput(text: string, context: string): void {\n  if (!text || typeof text !== 'string') {\n    throw new Error(`${context}: Input must be a non-empty string`);\n  }\n  if (text.length > MAX_TEXT_LENGTH) {\n    throw new Error(`${context}: Text exceeds maximum length of ${MAX_TEXT_LENGTH} characters`);\n  }\n}\n\n/**\n * Validate ID format\n */\nfunction validateId(id: string, context: string): void {\n  if (!id || typeof id !== 'string') {\n    throw new Error(`${context}: ID must be a non-empty string`);\n  }\n  if (!VALID_ID_PATTERN.test(id)) {\n    throw new Error(`${context}: Invalid ID format. Use 1-256 alphanumeric characters, underscores, or hyphens`);\n  }\n}\n\n/**\n * Validate array is not null and has expected dimension\n */\nfunction validateEmbedding(arr: Float32Array | null, context: string): asserts arr is Float32Array {\n  if (!arr) {\n    throw new Error(`${context}: Not initialized. Call the appropriate setup method first.`);\n  }\n}\n\n// Types matching ruvector's neural-embeddings\nexport interface DriftResult {\n  distance: number;\n  velocity: number;\n  acceleration: number;\n  trend: 'stable' | 'drifting' | 'accelerating' | 'recovering';\n  shouldEscalate: boolean;\n  shouldTriggerReasoning: boolean;\n}\n\nexport interface MemoryEntry {\n  id: string;\n  embedding: Float32Array;\n  content: string;\n  strength: number;\n  timestamp: number;\n  accessCount: number;\n  associations: string[];\n}\n\nexport interface AgentState {\n  id: string;\n  position: Float32Array;\n  velocity: Float32Array;\n  attention: Float32Array;\n  energy: number;\n  lastUpdate: number;\n}\n\nexport interface CoherenceResult {\n  isCoherent: boolean;\n  anomalyScore: number;\n  stabilityScore: number;\n  driftDirection: Float32Array | null;\n  warnings: string[];\n}\n\nexport interface SubstrateHealth {\n  memoryCount: number;\n  activeAgents: number;\n  avgDrift: number;\n  avgCoherence: number;\n  lastConsolidation: number;\n  uptime: number;\n}\n\n/**\n * Semantic Drift Detector\n * Monitors semantic movement and triggers reflexes\n * Optimized with pre-allocated buffers (80-95% less GC pressure)\n */\nexport class SemanticDriftDetector {\n  private embedder = getOptimizedEmbedder();\n  private baseline: Float32Array | null = null;\n  private history: Array<{ embedding: Float32Array; timestamp: number }> = [];\n  private velocity: Float32Array | null = null;\n  private acceleration: Float32Array | null = null;\n  private dimension = 0;\n\n  // Pre-allocated buffer for velocity calculation (reused each detect call)\n  private tempVelocityBuffer: Float32Array | null = null;\n\n  constructor(\n    private driftThreshold = 0.15,\n    private escalationThreshold = 0.30,\n    private historySize = 20\n  ) {}\n\n  async init() {\n    await this.embedder.init();\n  }\n\n  async setBaseline(context: string) {\n    validateTextInput(context, 'SemanticDriftDetector.setBaseline');\n\n    this.baseline = await this.embedder.embed(context);\n    this.dimension = this.baseline.length;\n    this.history = [{ embedding: this.baseline, timestamp: Date.now() }];\n\n    // Pre-allocate buffers once (reused for all subsequent detect calls)\n    if (!this.velocity || this.velocity.length !== this.dimension) {\n      this.velocity = new Float32Array(this.dimension);\n      this.acceleration = new Float32Array(this.dimension);\n      this.tempVelocityBuffer = new Float32Array(this.dimension);\n    } else {\n      // Zero out existing buffers\n      this.velocity.fill(0);\n      this.acceleration!.fill(0);\n    }\n  }\n\n  async detect(input: string): Promise<DriftResult> {\n    validateTextInput(input, 'SemanticDriftDetector.detect');\n    validateEmbedding(this.baseline, 'SemanticDriftDetector.detect');\n\n    const current = await this.embedder.embed(input);\n    const distance = 1 - cosineSimilarity(this.baseline, current);\n\n    // Calculate velocity using pre-allocated buffer (no new allocation!)\n    const prev = this.history[this.history.length - 1]?.embedding || this.baseline!;\n    const newVelocity = this.tempVelocityBuffer!;\n    const dim = this.dimension;\n\n    // 8x unrolled velocity calculation\n    const unrolledLen = dim - (dim % 8);\n    let i = 0;\n    for (; i < unrolledLen; i += 8) {\n      newVelocity[i] = current[i] - prev[i];\n      newVelocity[i+1] = current[i+1] - prev[i+1];\n      newVelocity[i+2] = current[i+2] - prev[i+2];\n      newVelocity[i+3] = current[i+3] - prev[i+3];\n      newVelocity[i+4] = current[i+4] - prev[i+4];\n      newVelocity[i+5] = current[i+5] - prev[i+5];\n      newVelocity[i+6] = current[i+6] - prev[i+6];\n      newVelocity[i+7] = current[i+7] - prev[i+7];\n    }\n    for (; i < dim; i++) {\n      newVelocity[i] = current[i] - prev[i];\n    }\n\n    // Calculate acceleration and update velocity in-place\n    let velocityMagSq = 0;\n    let accelerationMagSq = 0;\n\n    for (i = 0; i < dim; i++) {\n      const oldVel = this.velocity![i];\n      const newVel = newVelocity[i];\n      this.acceleration![i] = newVel - oldVel;\n      this.velocity![i] = newVel;\n      velocityMagSq += newVel * newVel;\n      accelerationMagSq += this.acceleration![i] * this.acceleration![i];\n    }\n\n    const velocityMag = Math.sqrt(velocityMagSq);\n    const accelerationMag = Math.sqrt(accelerationMagSq);\n\n    // Update history\n    this.history.push({ embedding: current, timestamp: Date.now() });\n    if (this.history.length > this.historySize) this.history.shift();\n\n    // Determine trend\n    let trend: DriftResult['trend'] = 'stable';\n    if (accelerationMag > 0.01) trend = 'accelerating';\n    else if (velocityMag > 0.05) trend = 'drifting';\n    else if (distance < this.driftThreshold * 0.5 && velocityMag < 0.02) trend = 'recovering';\n\n    return {\n      distance,\n      velocity: velocityMag,\n      acceleration: accelerationMag,\n      trend,\n      shouldEscalate: distance > this.driftThreshold,\n      shouldTriggerReasoning: distance > this.escalationThreshold\n    };\n  }\n\n  getStats(): { avgDrift: number; maxDrift: number; driftEvents: number } {\n    if (!this.baseline || this.history.length < 2) {\n      return { avgDrift: 0, maxDrift: 0, driftEvents: 0 };\n    }\n\n    const drifts = this.history.map(h => 1 - cosineSimilarity(this.baseline!, h.embedding));\n    const avgDrift = drifts.reduce((a, b) => a + b, 0) / drifts.length;\n    const maxDrift = Math.max(...drifts);\n    const driftEvents = drifts.filter(d => d > this.driftThreshold).length;\n\n    return { avgDrift, maxDrift, driftEvents };\n  }\n}\n\n/**\n * Memory Physics\n * Hippocampal-like dynamics: decay, interference, consolidation\n */\nexport class MemoryPhysics {\n  private embedder = getOptimizedEmbedder();\n  private memories: Map<string, MemoryEntry> = new Map();\n  private lastConsolidation = Date.now();\n\n  constructor(\n    private decayRate = 0.01,\n    private interferenceRadius = 0.3,\n    private forgettingThreshold = 0.1\n  ) {}\n\n  async init() {\n    await this.embedder.init();\n  }\n\n  async store(id: string, content: string): Promise<{ stored: boolean; interference: string[] }> {\n    validateId(id, 'MemoryPhysics.store');\n    validateTextInput(content, 'MemoryPhysics.store');\n\n    // Security: Enforce memory limit\n    if (this.memories.size >= MAX_MEMORIES && !this.memories.has(id)) {\n      throw new Error(`Memory capacity exceeded (max: ${MAX_MEMORIES}). Call consolidate() to free space.`);\n    }\n\n    const embedding = await this.embedder.embed(content);\n    const interference: string[] = [];\n\n    // Check interference with existing memories\n    for (const [memId, mem] of this.memories) {\n      const distance = euclideanDistance(embedding, mem.embedding);\n      if (distance < this.interferenceRadius) {\n        const strength = (this.interferenceRadius - distance) / this.interferenceRadius;\n        mem.strength *= (1 - strength * 0.5);\n        interference.push(memId);\n      }\n    }\n\n    this.memories.set(id, {\n      id,\n      embedding,\n      content,\n      strength: 1.0,\n      timestamp: Date.now(),\n      accessCount: 0,\n      associations: interference\n    });\n\n    return { stored: true, interference };\n  }\n\n  async recall(query: string, topK = 5): Promise<Array<MemoryEntry & { relevance: number }>> {\n    validateTextInput(query, 'MemoryPhysics.recall');\n\n    const queryEmb = await this.embedder.embed(query);\n    this.applyDecay();\n\n    const results: Array<MemoryEntry & { relevance: number }> = [];\n\n    for (const mem of this.memories.values()) {\n      if (mem.strength < this.forgettingThreshold) continue;\n\n      const relevance = cosineSimilarity(queryEmb, mem.embedding);\n      mem.accessCount++;\n      mem.strength = Math.min(1.0, mem.strength * 1.1); // Retrieval strengthens\n\n      results.push({ ...mem, relevance });\n    }\n\n    return results\n      .sort((a, b) => (b.relevance * b.strength) - (a.relevance * a.strength))\n      .slice(0, topK);\n  }\n\n  private applyDecay() {\n    const now = Date.now();\n    for (const mem of this.memories.values()) {\n      const hours = (now - mem.timestamp) / 3600000;\n      mem.strength *= Math.exp(-this.decayRate * hours);\n      mem.timestamp = now;\n    }\n  }\n\n  consolidate(): { merged: number; forgotten: number; remaining: number } {\n    const clusters: MemoryEntry[][] = [];\n    const used = new Set<string>();\n    let merged = 0;\n    let forgotten = 0;\n\n    // Remove forgotten memories\n    for (const [id, mem] of this.memories) {\n      if (mem.strength < this.forgettingThreshold) {\n        this.memories.delete(id);\n        forgotten++;\n      }\n    }\n\n    // Cluster similar memories\n    for (const mem of this.memories.values()) {\n      if (used.has(mem.id)) continue;\n\n      const cluster = [mem];\n      for (const other of this.memories.values()) {\n        if (used.has(other.id) || mem.id === other.id) continue;\n\n        const sim = cosineSimilarity(mem.embedding, other.embedding);\n        if (sim > 0.9) {\n          cluster.push(other);\n          used.add(other.id);\n          merged++;\n        }\n      }\n\n      if (cluster.length > 1) {\n        // Merge: keep strongest, combine strength\n        const strongest = cluster.reduce((a, b) => a.strength > b.strength ? a : b);\n        strongest.strength = Math.min(1.0, cluster.reduce((s, m) => s + m.strength, 0));\n        strongest.associations = [...new Set(cluster.flatMap(c => c.associations))];\n\n        for (const c of cluster) {\n          if (c.id !== strongest.id) this.memories.delete(c.id);\n        }\n      }\n\n      clusters.push(cluster);\n    }\n\n    this.lastConsolidation = Date.now();\n    return { merged, forgotten, remaining: this.memories.size };\n  }\n\n  getStats(): { total: number; active: number; avgStrength: number } {\n    const active = [...this.memories.values()].filter(m => m.strength > this.forgettingThreshold);\n    const avgStrength = active.length > 0\n      ? active.reduce((s, m) => s + m.strength, 0) / active.length\n      : 0;\n\n    return {\n      total: this.memories.size,\n      active: active.length,\n      avgStrength\n    };\n  }\n}\n\n/**\n * Embedding State Machine\n * Agent state through geometry: position, velocity, attention\n */\nexport class EmbeddingStateMachine {\n  private embedder = getOptimizedEmbedder();\n  private agents: Map<string, AgentState> = new Map();\n  private stateRegions: Map<string, Float32Array> = new Map();\n\n  constructor(private dimension = 384) {}\n\n  async init() {\n    await this.embedder.init();\n\n    // Initialize default state regions\n    const regions = {\n      exploring: 'exploring options, gathering information, uncertain, searching',\n      executing: 'executing task, confident, taking action, progressing',\n      waiting: 'waiting for input, paused, blocked, need information',\n      error: 'error state, confused, failed, need help, recovery'\n    };\n\n    for (const [name, desc] of Object.entries(regions)) {\n      this.stateRegions.set(name, await this.embedder.embed(desc));\n    }\n  }\n\n  async registerAgent(id: string, initialRole: string): Promise<AgentState> {\n    validateId(id, 'EmbeddingStateMachine.registerAgent');\n    validateTextInput(initialRole, 'EmbeddingStateMachine.registerAgent');\n\n    // Security: Enforce agent limit\n    if (this.agents.size >= MAX_AGENTS && !this.agents.has(id)) {\n      throw new Error(`Agent capacity exceeded (max: ${MAX_AGENTS})`);\n    }\n\n    const position = await this.embedder.embed(initialRole);\n    const state: AgentState = {\n      id,\n      position,\n      velocity: new Float32Array(this.dimension).fill(0),\n      attention: new Float32Array(this.dimension).fill(1),\n      energy: 1.0,\n      lastUpdate: Date.now()\n    };\n\n    this.agents.set(id, state);\n    return state;\n  }\n\n  async updateState(agentId: string, observation: string): Promise<{\n    newState: AgentState;\n    nearestRegion: string;\n    regionProximity: number;\n  }> {\n    validateId(agentId, 'EmbeddingStateMachine.updateState');\n    validateTextInput(observation, 'EmbeddingStateMachine.updateState');\n\n    const agent = this.agents.get(agentId);\n    if (!agent) throw new Error('Agent not found or access denied');\n\n    const obsEmb = await this.embedder.embed(observation);\n\n    // Update velocity and position\n    const learningRate = 0.3;\n    const momentumRate = 0.7;\n\n    for (let i = 0; i < this.dimension; i++) {\n      const gradient = obsEmb[i] - agent.position[i];\n      agent.velocity[i] = momentumRate * agent.velocity[i] + learningRate * gradient;\n      agent.position[i] += agent.velocity[i];\n    }\n\n    // Normalize position\n    const norm = Math.sqrt(agent.position.reduce((s, v) => s + v * v, 0));\n    for (let i = 0; i < this.dimension; i++) {\n      agent.position[i] /= norm;\n    }\n\n    // Update attention based on velocity magnitude\n    const velocityMag = Math.sqrt(agent.velocity.reduce((s, v) => s + v * v, 0));\n    for (let i = 0; i < this.dimension; i++) {\n      agent.attention[i] = 1 + velocityMag * Math.abs(agent.velocity[i]);\n    }\n\n    // Energy decay with movement\n    agent.energy = Math.max(0.1, agent.energy - velocityMag * 0.1);\n    agent.lastUpdate = Date.now();\n\n    // Find nearest state region\n    let nearestRegion = 'unknown';\n    let regionProximity = -1;\n\n    for (const [name, region] of this.stateRegions) {\n      const sim = cosineSimilarity(agent.position, region);\n      if (sim > regionProximity) {\n        regionProximity = sim;\n        nearestRegion = name;\n      }\n    }\n\n    return { newState: agent, nearestRegion, regionProximity };\n  }\n\n  getAgent(id: string): AgentState | undefined {\n    return this.agents.get(id);\n  }\n\n  getAllAgents(): AgentState[] {\n    return [...this.agents.values()];\n  }\n}\n\n/**\n * Swarm Coordinator\n * Multi-agent coordination through shared embedding space\n */\nexport class SwarmCoordinator {\n  private embedder = getOptimizedEmbedder();\n  private stateMachine: EmbeddingStateMachine;\n\n  constructor(dimension = 384) {\n    this.stateMachine = new EmbeddingStateMachine(dimension);\n  }\n\n  async init() {\n    await this.embedder.init();\n    await this.stateMachine.init();\n  }\n\n  async addAgent(id: string, role: string) {\n    validateId(id, 'SwarmCoordinator.addAgent');\n    validateTextInput(role, 'SwarmCoordinator.addAgent');\n\n    return this.stateMachine.registerAgent(id, role);\n  }\n\n  async coordinate(task: string): Promise<Array<{\n    agentId: string;\n    taskAlignment: number;\n    bestCollaborator: string | null;\n    collaborationScore: number;\n  }>> {\n    const taskEmb = await this.embedder.embed(task);\n    const agents = this.stateMachine.getAllAgents();\n    const results: Array<{\n      agentId: string;\n      taskAlignment: number;\n      bestCollaborator: string | null;\n      collaborationScore: number;\n    }> = [];\n\n    for (const agent of agents) {\n      const taskAlignment = cosineSimilarity(agent.position, taskEmb);\n\n      // Find best collaborator\n      let bestCollaborator: string | null = null;\n      let bestScore = -1;\n\n      for (const other of agents) {\n        if (other.id === agent.id) continue;\n\n        const otherAlignment = cosineSimilarity(other.position, taskEmb);\n        const complementarity = 1 - cosineSimilarity(agent.position, other.position);\n        const score = otherAlignment * 0.6 + complementarity * 0.4;\n\n        if (score > bestScore) {\n          bestScore = score;\n          bestCollaborator = other.id;\n        }\n      }\n\n      results.push({\n        agentId: agent.id,\n        taskAlignment,\n        bestCollaborator,\n        collaborationScore: bestScore\n      });\n    }\n\n    return results.sort((a, b) => b.taskAlignment - a.taskAlignment);\n  }\n\n  specialize(): void {\n    const agents = this.stateMachine.getAllAgents();\n    const repulsionStrength = 0.05;\n\n    for (let i = 0; i < agents.length; i++) {\n      for (let j = i + 1; j < agents.length; j++) {\n        const sim = cosineSimilarity(agents[i].position, agents[j].position);\n        if (sim > 0.8) {\n          // Repel similar agents\n          for (let k = 0; k < agents[i].position.length; k++) {\n            const repulsion = repulsionStrength * (agents[j].position[k] - agents[i].position[k]);\n            agents[i].position[k] -= repulsion;\n            agents[j].position[k] += repulsion;\n          }\n        }\n      }\n    }\n\n    // Normalize all\n    for (const agent of agents) {\n      const norm = Math.sqrt(agent.position.reduce((s, v) => s + v * v, 0));\n      for (let k = 0; k < agent.position.length; k++) {\n        agent.position[k] /= norm;\n      }\n    }\n  }\n\n  getStatus(): { agentCount: number; avgEnergy: number; coherence: number } {\n    const agents = this.stateMachine.getAllAgents();\n    if (agents.length === 0) return { agentCount: 0, avgEnergy: 0, coherence: 0 };\n\n    const avgEnergy = agents.reduce((s, a) => s + a.energy, 0) / agents.length;\n\n    // Coherence = average pairwise similarity\n    let coherence = 0;\n    let pairs = 0;\n    for (let i = 0; i < agents.length; i++) {\n      for (let j = i + 1; j < agents.length; j++) {\n        coherence += cosineSimilarity(agents[i].position, agents[j].position);\n        pairs++;\n      }\n    }\n    coherence = pairs > 0 ? coherence / pairs : 1;\n\n    return { agentCount: agents.length, avgEnergy, coherence };\n  }\n}\n\n/**\n * Coherence Monitor\n * Safety and alignment detection\n */\nexport class CoherenceMonitor {\n  private embedder = getOptimizedEmbedder();\n  private baseline: Float32Array[] = [];\n  private centroid: Float32Array | null = null;\n  private avgDistance = 0;\n\n  async init() {\n    await this.embedder.init();\n  }\n\n  async calibrate(goodOutputs: string[]): Promise<{ calibrated: boolean; sampleCount: number }> {\n    // Security: Validate input array\n    if (!Array.isArray(goodOutputs)) {\n      throw new Error('CoherenceMonitor.calibrate: goodOutputs must be an array');\n    }\n    if (goodOutputs.length === 0) {\n      throw new Error('CoherenceMonitor.calibrate: At least one sample is required');\n    }\n    if (goodOutputs.length > MAX_BASELINE_SAMPLES) {\n      throw new Error(`CoherenceMonitor.calibrate: Sample count exceeds maximum of ${MAX_BASELINE_SAMPLES}`);\n    }\n\n    // Validate each sample\n    for (const output of goodOutputs) {\n      validateTextInput(output, 'CoherenceMonitor.calibrate');\n    }\n\n    this.baseline = await this.embedder.embedBatch(goodOutputs);\n    const dim = this.baseline[0].length;\n\n    // Calculate centroid\n    this.centroid = new Float32Array(dim).fill(0);\n    for (const emb of this.baseline) {\n      for (let i = 0; i < dim; i++) {\n        this.centroid[i] += emb[i];\n      }\n    }\n    for (let i = 0; i < dim; i++) {\n      this.centroid[i] /= this.baseline.length;\n    }\n\n    // Average distance from centroid\n    this.avgDistance = this.baseline.reduce((s, b) =>\n      s + euclideanDistance(b, this.centroid!), 0\n    ) / this.baseline.length;\n\n    return { calibrated: true, sampleCount: this.baseline.length };\n  }\n\n  async check(output: string): Promise<CoherenceResult> {\n    validateTextInput(output, 'CoherenceMonitor.check');\n    validateEmbedding(this.centroid, 'CoherenceMonitor.check (call calibrate() first)');\n\n    const outputEmb = await this.embedder.embed(output);\n    const warnings: string[] = [];\n\n    // Anomaly score\n    const distance = euclideanDistance(outputEmb, this.centroid);\n    const anomalyScore = distance / this.avgDistance;\n\n    // Nearest neighbor\n    let maxSim = -1;\n    for (const b of this.baseline) {\n      const sim = cosineSimilarity(outputEmb, b);\n      if (sim > maxSim) maxSim = sim;\n    }\n    const stabilityScore = maxSim;\n\n    // Drift direction\n    const driftDirection = new Float32Array(outputEmb.length);\n    for (let i = 0; i < outputEmb.length; i++) {\n      driftDirection[i] = outputEmb[i] - this.centroid[i];\n    }\n\n    // Warnings\n    if (anomalyScore > 2.0) {\n      warnings.push('CRITICAL: Output significantly outside baseline');\n    } else if (anomalyScore > 1.5) {\n      warnings.push('WARNING: Output drifting from baseline');\n    }\n\n    if (stabilityScore < 0.5) {\n      warnings.push('WARNING: Low similarity to all baseline examples');\n    }\n\n    return {\n      isCoherent: anomalyScore < 1.5 && stabilityScore > 0.5,\n      anomalyScore,\n      stabilityScore,\n      driftDirection,\n      warnings\n    };\n  }\n}\n\n/**\n * Neural Substrate\n * Unified nervous system combining all components\n */\nexport class NeuralSubstrate {\n  public drift: SemanticDriftDetector;\n  public memory: MemoryPhysics;\n  public states: EmbeddingStateMachine;\n  public swarm: SwarmCoordinator;\n  public coherence: CoherenceMonitor;\n\n  private startTime = Date.now();\n\n  constructor(config: {\n    dimension?: number;\n    driftThreshold?: number;\n    decayRate?: number;\n  } = {}) {\n    const { dimension = 384, driftThreshold = 0.15, decayRate = 0.01 } = config;\n\n    this.drift = new SemanticDriftDetector(driftThreshold);\n    this.memory = new MemoryPhysics(decayRate);\n    this.states = new EmbeddingStateMachine(dimension);\n    this.swarm = new SwarmCoordinator(dimension);\n    this.coherence = new CoherenceMonitor();\n  }\n\n  async init() {\n    await Promise.all([\n      this.drift.init(),\n      this.memory.init(),\n      this.states.init(),\n      this.swarm.init(),\n      this.coherence.init()\n    ]);\n  }\n\n  async process(input: string, context?: {\n    agentId?: string;\n    memoryId?: string;\n    checkCoherence?: boolean;\n  }): Promise<{\n    drift: DriftResult;\n    state?: { nearestRegion: string; regionProximity: number };\n    coherence?: CoherenceResult;\n    stored?: boolean;\n  }> {\n    const result: any = {};\n\n    // Always check drift\n    result.drift = await this.drift.detect(input);\n\n    // Update agent state if specified\n    if (context?.agentId) {\n      const { nearestRegion, regionProximity } = await this.states.updateState(\n        context.agentId,\n        input\n      );\n      result.state = { nearestRegion, regionProximity };\n    }\n\n    // Store in memory if specified\n    if (context?.memoryId) {\n      const { stored } = await this.memory.store(context.memoryId, input);\n      result.stored = stored;\n    }\n\n    // Check coherence if requested\n    if (context?.checkCoherence) {\n      result.coherence = await this.coherence.check(input);\n    }\n\n    return result;\n  }\n\n  consolidate(): { memory: ReturnType<MemoryPhysics['consolidate']> } {\n    return { memory: this.memory.consolidate() };\n  }\n\n  health(): SubstrateHealth {\n    const memStats = this.memory.getStats();\n    const driftStats = this.drift.getStats();\n    const swarmStatus = this.swarm.getStatus();\n\n    return {\n      memoryCount: memStats.total,\n      activeAgents: swarmStatus.agentCount,\n      avgDrift: driftStats.avgDrift,\n      avgCoherence: swarmStatus.coherence,\n      lastConsolidation: 0, // Would need to track this\n      uptime: Date.now() - this.startTime\n    };\n  }\n}\n\n// Export singleton factory\nlet substrate: NeuralSubstrate | null = null;\n\nexport async function getNeuralSubstrate(config?: {\n  dimension?: number;\n  driftThreshold?: number;\n  decayRate?: number;\n}): Promise<NeuralSubstrate> {\n  if (!substrate) {\n    substrate = new NeuralSubstrate(config);\n    await substrate.init();\n  }\n  return substrate;\n}\n"]}

package/dist/embeddings/optimized-embedder.d.ts

@@ -0,0 +1,103 @@
+/**
+ * Optimized Embedder for Agentic-Flow
+ *
+ * Uses ruvector's AdaptiveEmbedder optimizations:
+ * - Float32Array with flattened matrices
+ * - 256-entry LRU cache with FNV-1a hash
+ * - SIMD-friendly loop unrolling (4x)
+ * - Pre-allocated buffers (no GC pressure)
+ *
+ * Downloads ONNX models at init for offline use.
+ */
+export interface EmbedderConfig {
+    modelId: string;
+    dimension: number;
+    cacheSize: number;
+    modelDir: string;
+    autoDownload: boolean;
+}
+export declare const DEFAULT_CONFIG: EmbedderConfig;
+/**
+ * Optimized cosine similarity with 8x loop unrolling and separate accumulators
+ * ~3-4x faster than naive implementation due to instruction-level parallelism
+ */
+export declare function cosineSimilarity(a: Float32Array, b: Float32Array): number;
+/**
+ * Optimized euclidean distance with loop unrolling
+ */
+export declare function euclideanDistance(a: Float32Array, b: Float32Array): number;
+/**
+ * Normalize vector in-place (optimized)
+ */
+export declare function normalizeVector(v: Float32Array): Float32Array;
+export interface DownloadProgress {
+    modelId: string;
+    bytesDownloaded: number;
+    totalBytes: number;
+    percent: number;
+}
+export declare function downloadModel(modelId: string, targetDir: string, onProgress?: (progress: DownloadProgress) => void): Promise<string>;
+export declare function listAvailableModels(): Array<{
+    id: string;
+    dimension: number;
+    size: string;
+    quantized: boolean;
+    downloaded: boolean;
+}>;
+export declare class OptimizedEmbedder {
+    private config;
+    private cache;
+    private onnxSession;
+    private tokenizer;
+    private initialized;
+    private initPromise;
+    private outputBuffer;
+    private static readonly MAX_TOKENS;
+    private inputIdsBuffer;
+    private attentionMaskBuffer;
+    private tokenTypeIdsBuffer;
+    constructor(config?: Partial<EmbedderConfig>);
+    /**
+     * Initialize the embedder (download model if needed)
+     */
+    init(): Promise<void>;
+    private _init;
+    /**
+     * Embed a single text (with caching)
+     */
+    embed(text: string): Promise<Float32Array>;
+    private embedWithOnnx;
+    private simpleTokenize;
+    private embedWithTransformers;
+    /**
+     * Embed multiple texts in batch with parallel processing
+     * 3-4x faster than sequential processing for large batches
+     */
+    embedBatch(texts: string[], concurrency?: number): Promise<Float32Array[]>;
+    /**
+     * Find similar texts using optimized cosine similarity
+     */
+    findSimilar(query: string, candidates: string[], topK?: number): Promise<Array<{
+        text: string;
+        score: number;
+        index: number;
+    }>>;
+    /**
+     * Get cache statistics
+     */
+    getCacheStats(): {
+        size: number;
+        maxSize: number;
+    };
+    /**
+     * Clear the embedding cache
+     */
+    clearCache(): void;
+    /**
+     * Check if initialized
+     */
+    isInitialized(): boolean;
+}
+export declare function getOptimizedEmbedder(config?: Partial<EmbedderConfig>): OptimizedEmbedder;
+export declare function initEmbeddings(modelId?: string): Promise<void>;
+//# sourceMappingURL=optimized-embedder.d.ts.map

package/dist/embeddings/optimized-embedder.d.ts.map

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