agentdb 3.0.0-alpha.2 → 3.0.0-alpha.20

package/dist/src/controllers/EmbeddingService.js

@@ -4,46 +4,120 @@
  * Handles text-to-vector embedding generation using various models.
  * Supports both local (transformers.js) and remote (OpenAI, etc.) embeddings.
  */
+import { applyRoleTemplate, createEmbeddingSpaceIdentity } from '../embedding/EmbeddingSpaceIdentity.js';
+const symmetricModels = [
+    'Xenova/all-MiniLM-L6-v2',
+    'all-MiniLM-L6-v2',
+    'text-embedding-3-small',
+    'text-embedding-3-large',
+    'text-embedding-ada-002',
+    'mock',
+    'mock-model',
+    'small-model',
+    'large-model',
+    'xl-model'
+];
+const modelRoleRegistry = new Map(symmetricModels.map(model => [model, { kind: 'symmetric' }]));
+function policiesEqual(left, right) {
+    return JSON.stringify(left) === JSON.stringify(right);
+}
+/**
+ * Register an exact model revision's role policy. Family-name inference is
+ * deliberately unsupported because variants can use different instructions.
+ */
+export function registerEmbeddingModelRolePolicy(modelId, policy) {
+    if (!modelId.trim())
+        throw new Error('Embedding modelId cannot be empty');
+    const existing = modelRoleRegistry.get(modelId);
+    if (existing && !policiesEqual(existing, policy)) {
+        throw new Error(`Cannot replace authoritative role policy for registered model ${modelId}`);
+    }
+    modelRoleRegistry.set(modelId, Object.freeze({ ...policy }));
+}
 export class EmbeddingService {
     config;
+    rolePolicy;
+    embeddingSpaceIdentity;
     // eslint-disable-next-line @typescript-eslint/no-explicit-any -- transformers.js pipeline has no exported type
     pipeline;
     cache;
+    inFlightCache;
     constructor(config) {
         this.config = config;
         this.cache = new Map();
+        this.inFlightCache = new Map();
+        const registeredPolicy = modelRoleRegistry.get(config.model);
+        if (registeredPolicy && config.rolePolicy && !policiesEqual(registeredPolicy, config.rolePolicy)) {
+            throw new Error(`Embedding role policy for registered model ${config.model} disagrees with the model registry`);
+        }
+        if (!registeredPolicy && !config.rolePolicy) {
+            throw new Error(`Unregistered embedding model ${config.model} requires an explicit rolePolicy`);
+        }
+        this.rolePolicy = registeredPolicy ?? Object.freeze({ ...config.rolePolicy });
+        if (config.embeddingSpace && !policiesEqual(config.embeddingSpace.rolePolicy, this.rolePolicy)) {
+            throw new Error('Embedding space rolePolicy disagrees with the model capability policy');
+        }
+        this.embeddingSpaceIdentity = createEmbeddingSpaceIdentity(config.embeddingSpace ?? {
+            modelId: config.model,
+            modelArtifactHash: `legacy-unverified:${config.model}`,
+            tokenizerHash: `legacy-unverified:${config.model}`,
+            promptTemplateHash: `legacy-unverified:${JSON.stringify(this.rolePolicy)}`,
+            poolingStrategy: 'mean',
+            truncationLength: 512,
+            outputDimension: config.dimension,
+            outputDtype: 'float32',
+            normalization: 'l2',
+            runtimeRevision: `legacy-unverified:${config.provider}`,
+            distanceMetric: 'cosine',
+            rolePolicy: this.rolePolicy
+        });
     }
     /**
      * Initialize the embedding service
      */
     async initialize() {
         if (this.config.provider === 'transformers') {
+            if (process.env.AGENTDB_DISABLE_TRANSFORMERS === '1') {
+                console.error('Transformers.js disabled by AGENTDB_DISABLE_TRANSFORMERS');
+                this.pipeline = null;
+                return;
+            }
             // Use transformers.js for local embeddings
             try {
-                const transformers = await import('@xenova/transformers');
+                const transformers = await import('@huggingface/transformers');
+                const env = transformers.env;
+                // Try to load model from bundled .rvf or local cache first
+                try {
+                    const { ModelCacheLoader } = await import('../model/ModelCacheLoader.js');
+                    const cached = await ModelCacheLoader.resolve(this.config.model);
+                    if (cached) {
+                        env.localModelPath = cached.localPath;
+                        env.allowRemoteModels = false;
+                        env.cacheDir = cached.localPath;
+                    }
+                }
+                catch {
+                    // ModelCacheLoader not available — fall through to network download
+                }
                 // Set Hugging Face token if available from environment
                 const hfToken = process.env.HUGGINGFACE_API_KEY || process.env.HF_TOKEN;
-                if (hfToken) {
-                    // Set the token for Transformers.js to use
-                    if (transformers.env && typeof transformers.env === 'object') {
-                        transformers.env.HF_TOKEN = hfToken;
-                        console.log('🔑 Using Hugging Face API key from environment');
-                    }
+                if (hfToken && typeof env === 'object') {
+                    env.HF_TOKEN = hfToken;
                 }
                 this.pipeline = await transformers.pipeline('feature-extraction', this.config.model);
-                console.log(`✅ Transformers.js loaded: ${this.config.model}`);
+                console.error(`Transformers.js loaded: ${this.config.model}`);
             }
             catch (error) {
                 const errorMessage = error instanceof Error ? error.message : String(error);
-                console.warn(`⚠️  Transformers.js initialization failed: ${errorMessage}`);
+                console.warn(`Transformers.js initialization failed: ${errorMessage}`);
                 console.warn('   Falling back to mock embeddings for testing');
                 console.warn('   This is normal if:');
-                console.warn('     • Running offline/without internet access');
-                console.warn('     • Model not yet downloaded (~90MB on first use)');
-                console.warn('     • Network connectivity issues');
+                console.warn('     - Running offline/without internet access');
+                console.warn('     - Model not yet downloaded (~90MB on first use)');
+                console.warn('     - Network connectivity issues');
                 console.warn('   To use real embeddings:');
-                console.warn('     • Ensure internet connectivity for first-time model download');
-                console.warn('     • Or pre-download: npx agentdb install-embeddings');
+                console.warn('     - Ensure internet connectivity for first-time model download');
+                console.warn('     - Or pre-download: npx agentdb install-embeddings');
                 this.pipeline = null;
             }
         }
@@ -52,33 +126,57 @@ export class EmbeddingService {
      * Generate embedding for text
      */
     async embed(text) {
+        if (this.rolePolicy.kind === 'asymmetric') {
+            throw new Error('embed() is ambiguous for an asymmetric model; use embedQuery() or embedPassage()');
+        }
+        return this.embedFor('passage', text);
+    }
+    /** Embed retrieval query text using the model's exact query template. */
+    async embedQuery(text) {
+        return this.embedFor('query', text);
+    }
+    /** Embed corpus text using the model's exact passage template. */
+    async embedPassage(text) {
+        return this.embedFor('passage', text);
+    }
+    /** Role-authoritative embedding entry point. */
+    async embedFor(role, text) {
+        const processedText = this.rolePolicy.kind === 'asymmetric'
+            ? applyRoleTemplate(role === 'query'
+                ? this.rolePolicy.queryTemplate
+                : this.rolePolicy.passageTemplate, text)
+            : text;
         // Check cache
-        const cacheKey = `${this.config.model}:${text}`;
+        const cacheKey = `${this.embeddingSpaceIdentity.hash}:${role}:${processedText}`;
         if (this.cache.has(cacheKey)) {
             return this.cache.get(cacheKey);
         }
-        let embedding;
-        if (this.config.provider === 'transformers' && this.pipeline) {
-            // Use transformers.js
-            const output = await this.pipeline(text, { pooling: 'mean', normalize: true });
-            embedding = new Float32Array(output.data);
+        const existing = this.inFlightCache.get(cacheKey);
+        if (existing) {
+            return existing;
         }
-        else if (this.config.provider === 'openai' && this.config.apiKey) {
-            // Use OpenAI API
-            embedding = await this.embedOpenAI(text);
-        }
-        else {
-            // Mock embedding for testing
-            embedding = this.mockEmbedding(text);
+        const generation = this.generateEmbedding(processedText).then(embedding => {
+            if (this.inFlightCache.get(cacheKey) === generation) {
+                if (this.cache.size > 10000) {
+                    const keysToDelete = Array.from(this.cache.keys()).slice(0, 5000);
+                    keysToDelete.forEach(k => this.cache.delete(k));
+                }
+                this.cache.set(cacheKey, embedding);
+            }
+            return embedding;
+        });
+        this.inFlightCache.set(cacheKey, generation);
+        try {
+            return await generation;
         }
-        // Cache result
-        if (this.cache.size > 10000) {
-            // Simple LRU: clear half the cache
-            const keysToDelete = Array.from(this.cache.keys()).slice(0, 5000);
-            keysToDelete.forEach(k => this.cache.delete(k));
+        finally {
+            if (this.inFlightCache.get(cacheKey) === generation) {
+                this.inFlightCache.delete(cacheKey);
+            }
         }
-        this.cache.set(cacheKey, embedding);
-        return embedding;
+    }
+    getEmbeddingSpaceIdentity() {
+        return this.embeddingSpaceIdentity;
     }
     /**
      * Batch embed multiple texts
@@ -86,15 +184,32 @@ export class EmbeddingService {
     async embedBatch(texts) {
         return Promise.all(texts.map(text => this.embed(text)));
     }
+    async embedQueryBatch(texts) {
+        return Promise.all(texts.map(text => this.embedQuery(text)));
+    }
+    async embedPassageBatch(texts) {
+        return Promise.all(texts.map(text => this.embedPassage(text)));
+    }
     /**
      * Clear embedding cache
      */
     clearCache() {
         this.cache.clear();
+        this.inFlightCache.clear();
     }
     // ========================================================================
     // Private Methods
     // ========================================================================
+    async generateEmbedding(text) {
+        if (this.config.provider === 'transformers' && this.pipeline) {
+            const output = await this.pipeline(text, { pooling: 'mean', normalize: true });
+            return new Float32Array(output.data);
+        }
+        if (this.config.provider === 'openai' && this.config.apiKey) {
+            return this.embedOpenAI(text);
+        }
+        return this.mockEmbedding(text);
+    }
     async embedOpenAI(text) {
         const response = await fetch('https://api.openai.com/v1/embeddings', {
             method: 'POST',

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package/dist/src/controllers/EnhancedEmbeddingService.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"EnhancedEmbeddingService.d.ts","sourceRoot":"","sources":["../../../src/controllers/EnhancedEmbeddingService.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAEH,OAAO,EAAE,gBAAgB,EAAE,eAAe,EAAE,MAAM,uBAAuB,CAAC;AAK1E,MAAM,WAAW,uBAAwB,SAAQ,eAAe;IAC9D,UAAU,CAAC,EAAE,OAAO,CAAC;IACrB,qBAAqB,CAAC,EAAE,OAAO,CAAC;IAChC,SAAS,CAAC,EAAE,MAAM,CAAC;CACpB;AAED,qBAAa,wBAAyB,SAAQ,gBAAgB;IAC5D,OAAO,CAAC,UAAU,CAAiC;IACnD,OAAO,CAAC,cAAc,CAA0B;gBAEpC,MAAM,EAAE,uBAAuB;IAc3C;;OAEG;IACH,OAAO,CAAC,cAAc;IAYtB;;OAEG;IACG,UAAU,CAAC,KAAK,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC,YAAY,EAAE,CAAC;IAsB1D;;OAEG;IACG,UAAU,CAAC,KAAK,EAAE,MAAM,EAAE,KAAK,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,CAAC;IAc/D;;OAEG;IACG,eAAe,CACnB,KAAK,EAAE,MAAM,EACb,MAAM,EAAE,MAAM,EAAE,EAChB,CAAC,GAAE,MAAU,GACZ,OAAO,CAAC,KAAK,CAAC;QAAE,IAAI,EAAE,MAAM,CAAC;QAAC,UAAU,EAAE,MAAM,CAAC;QAAC,KAAK,EAAE,MAAM,CAAA;KAAE,CAAC,CAAC;IA0BtE;;OAEG;IACH,QAAQ,IAAI;QACV,SAAS,EAAE,MAAM,CAAC;QAClB,WAAW,EAAE,OAAO,CAAC;QACrB,WAAW,EAAE,OAAO,CAAC;KACtB;IAWD;;OAEG;IACH,OAAO,CAAC,gBAAgB;CAGzB"}
+{"version":3,"file":"EnhancedEmbeddingService.d.ts","sourceRoot":"","sources":["../../../src/controllers/EnhancedEmbeddingService.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAEH,OAAO,EAAE,gBAAgB,EAAE,eAAe,EAAE,MAAM,uBAAuB,CAAC;AAG1E,MAAM,WAAW,uBAAwB,SAAQ,eAAe;IAC9D,UAAU,CAAC,EAAE,OAAO,CAAC;IACrB,qBAAqB,CAAC,EAAE,OAAO,CAAC;IAChC,SAAS,CAAC,EAAE,MAAM,CAAC;CACpB;AAED,qBAAa,wBAAyB,SAAQ,gBAAgB;IAC5D,OAAO,CAAC,UAAU,CAAiC;IACnD,OAAO,CAAC,cAAc,CAA0B;gBAEpC,MAAM,EAAE,uBAAuB;IAc3C;;OAEG;IACH,OAAO,CAAC,cAAc;IAYtB;;OAEG;IACG,UAAU,CAAC,KAAK,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC,YAAY,EAAE,CAAC;IAsB1D;;OAEG;IACG,UAAU,CAAC,KAAK,EAAE,MAAM,EAAE,KAAK,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,CAAC;IAc/D;;OAEG;IACG,eAAe,CACnB,KAAK,EAAE,MAAM,EACb,MAAM,EAAE,MAAM,EAAE,EAChB,CAAC,GAAE,MAAU,GACZ,OAAO,CAAC,KAAK,CAAC;QAAE,IAAI,EAAE,MAAM,CAAC;QAAC,UAAU,EAAE,MAAM,CAAC;QAAC,KAAK,EAAE,MAAM,CAAA;KAAE,CAAC,CAAC;IA0BtE;;OAEG;IACH,QAAQ,IAAI;QACV,SAAS,EAAE,MAAM,CAAC;QAClB,WAAW,EAAE,OAAO,CAAC;QACrB,WAAW,EAAE,OAAO,CAAC;KACtB;IAUD;;OAEG;IACH,OAAO,CAAC,gBAAgB;CAczB"}

package/dist/src/controllers/EnhancedEmbeddingService.js

@@ -6,7 +6,6 @@
  */
 import { EmbeddingService } from './EmbeddingService.js';
 import { WASMVectorSearch } from './WASMVectorSearch.js';
-import { cosineSimilarity } from '../utils/similarity.js';
 export class EnhancedEmbeddingService extends EmbeddingService {
     wasmSearch = null;
     enhancedConfig;
@@ -58,8 +57,8 @@ export class EnhancedEmbeddingService extends EmbeddingService {
      */
     async similarity(textA, textB) {
         const [embeddingA, embeddingB] = await Promise.all([
-            this.embed(textA),
-            this.embed(textB),
+            this.embedPassage(textA),
+            this.embedPassage(textB),
         ]);
         if (this.wasmSearch) {
             return this.wasmSearch.cosineSimilarity(embeddingA, embeddingB);
@@ -71,8 +70,8 @@ export class EnhancedEmbeddingService extends EmbeddingService {
      * Find most similar texts from a corpus
      */
     async findMostSimilar(query, corpus, k = 5) {
-        const queryEmbedding = await this.embed(query);
-        const corpusEmbeddings = await this.embedBatch(corpus);
+        const queryEmbedding = await this.embedQuery(query);
+        const corpusEmbeddings = await this.embedPassageBatch(corpus);
         let similarities;
         if (this.wasmSearch) {
             similarities = this.wasmSearch.batchSimilarity(queryEmbedding, corpusEmbeddings);
@@ -96,7 +95,6 @@ export class EnhancedEmbeddingService extends EmbeddingService {
     getStats() {
         const wasmStats = this.wasmSearch?.getStats();
         return {
-            // eslint-disable-next-line @typescript-eslint/no-explicit-any -- accessing parent's private cache property
             cacheSize: this.cache.size,
             wasmEnabled: wasmStats?.wasmAvailable ?? false,
             simdEnabled: wasmStats?.simdAvailable ?? false,
@@ -106,7 +104,16 @@ export class EnhancedEmbeddingService extends EmbeddingService {
      * Cosine similarity fallback
      */
     cosineSimilarity(a, b) {
-        return cosineSimilarity(a, b);
+        let dotProduct = 0;
+        let normA = 0;
+        let normB = 0;
+        for (let i = 0; i < a.length; i++) {
+            dotProduct += a[i] * b[i];
+            normA += a[i] * a[i];
+            normB += b[i] * b[i];
+        }
+        const denom = Math.sqrt(normA) * Math.sqrt(normB);
+        return denom === 0 ? 0 : dotProduct / denom;
     }
 }
 //# sourceMappingURL=EnhancedEmbeddingService.js.map

package/dist/src/controllers/EnhancedEmbeddingService.js.map

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package/dist/src/controllers/ExplainableRecall.d.ts

@@ -17,7 +17,7 @@
  * - Feature flag: ENABLE_GRAPH_ROPE (default: false)
  * - 100% backward compatible with fallback to standard retrieval
  */
-import type { IDatabaseConnection } from '../types/database.types.js';
+type Database = any;
 import { type GraphRoPEConfig } from '../services/AttentionService.js';
 import { EmbeddingService } from './EmbeddingService.js';
 /**
@@ -45,7 +45,7 @@ export interface RecallCertificate {
     policyVersion?: string;
     accessLevel: 'public' | 'internal' | 'confidential' | 'restricted';
     latencyMs?: number;
-    metadata?: Record<string, unknown>;
+    metadata?: Record<string, any>;
 }
 export interface MerkleProof {
     hash: string;
@@ -66,7 +66,7 @@ export interface ProvenanceSource {
     parentHash?: string;
     derivedFrom?: string[];
     creator?: string;
-    metadata?: Record<string, unknown>;
+    metadata?: Record<string, any>;
 }
 export declare class ExplainableRecall {
     private db;
@@ -79,7 +79,7 @@ export declare class ExplainableRecall {
      * v1 mode: new ExplainableRecall(db)
      * v2 mode: new ExplainableRecall(db, embedder, config)
      */
-    constructor(db: IDatabaseConnection, embedder?: EmbeddingService, config?: ExplainableRecallConfig);
+    constructor(db: Database, embedder?: EmbeddingService, config?: ExplainableRecallConfig);
     /**
      * Create a recall certificate for a retrieval operation
      *
@@ -189,4 +189,5 @@ export declare class ExplainableRecall {
      */
     private determineReason;
 }
+export {};
 //# sourceMappingURL=ExplainableRecall.d.ts.map

package/dist/src/controllers/ExplainableRecall.d.ts.map

@@ -1 +1 @@
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package/dist/src/controllers/ExplainableRecall.js

@@ -173,9 +173,9 @@ export class ExplainableRecall {
                 sourceType: source.source_type,
                 sourceId: source.source_id,
                 contentHash: source.content_hash,
-                parentHash: source.parent_hash ?? undefined,
+                parentHash: source.parent_hash,
                 derivedFrom: source.derived_from ? JSON.parse(source.derived_from) : undefined,
-                creator: source.creator ?? undefined,
+                creator: source.creator,
                 metadata: source.metadata ? JSON.parse(source.metadata) : undefined
             });
             currentHash = source.parent_hash;
@@ -203,8 +203,8 @@ export class ExplainableRecall {
             merkleRoot: certRow.merkle_root,
             sourceHashes: JSON.parse(certRow.source_hashes),
             proofChain: JSON.parse(certRow.proof_chain),
-            policyProof: certRow.policy_proof ?? undefined,
-            policyVersion: certRow.policy_version ?? undefined,
+            policyProof: certRow.policy_proof,
+            policyVersion: certRow.policy_version,
             accessLevel: certRow.access_level,
             latencyMs: certRow.latency_ms
         };
@@ -223,7 +223,7 @@ export class ExplainableRecall {
             label: `Certificate: ${certificate.queryText.substring(0, 30)}...`
         });
         // Add source nodes and edges
-        for (const lineage of sources.values()) {
+        for (const [hash, lineage] of sources.entries()) {
             for (let i = 0; i < lineage.length; i++) {
                 const source = lineage[i];
                 const nodeId = `${source.sourceType}-${source.sourceId}`;
@@ -280,8 +280,8 @@ export class ExplainableRecall {
             merkleRoot: certRow.merkle_root,
             sourceHashes: JSON.parse(certRow.source_hashes),
             proofChain: JSON.parse(certRow.proof_chain),
-            policyProof: certRow.policy_proof ?? undefined,
-            policyVersion: certRow.policy_version ?? undefined,
+            policyProof: certRow.policy_proof,
+            policyVersion: certRow.policy_version,
             accessLevel: certRow.access_level,
             latencyMs: certRow.latency_ms
         };
@@ -389,13 +389,9 @@ export class ExplainableRecall {
         return contentHash;
     }
     // Prepare statement ONCE outside loop (better-sqlite3 best practice)
-    // eslint-disable-next-line @typescript-eslint/no-explicit-any -- cached prepared statement from better-sqlite3
     _episodeStmt;
-    // eslint-disable-next-line @typescript-eslint/no-explicit-any -- cached prepared statement from better-sqlite3
     _skillStmt;
-    // eslint-disable-next-line @typescript-eslint/no-explicit-any -- cached prepared statement from better-sqlite3
     _noteStmt;
-    // eslint-disable-next-line @typescript-eslint/no-explicit-any -- cached prepared statement from better-sqlite3
     _factStmt;
     /**
      * Get content hash for a memory
@@ -403,38 +399,34 @@ export class ExplainableRecall {
     getContentHash(sourceType, sourceId) {
         let content = '';
         switch (sourceType) {
-            case 'episode': {
+            case 'episode':
                 if (!this._episodeStmt) {
                     this._episodeStmt = this.db.prepare('SELECT task, output FROM episodes WHERE id = ?');
                 }
                 const episode = this._episodeStmt.get(sourceId);
                 content = episode ? `${episode.task}:${episode.output}` : '';
                 break;
-            }
-            case 'skill': {
+            case 'skill':
                 if (!this._skillStmt) {
                     this._skillStmt = this.db.prepare('SELECT name, code FROM skills WHERE id = ?');
                 }
                 const skill = this._skillStmt.get(sourceId);
                 content = skill ? `${skill.name}:${skill.code}` : '';
                 break;
-            }
-            case 'note': {
+            case 'note':
                 if (!this._noteStmt) {
                     this._noteStmt = this.db.prepare('SELECT text FROM notes WHERE id = ?');
                 }
                 const note = this._noteStmt.get(sourceId);
                 content = note ? note.text : '';
                 break;
-            }
-            case 'fact': {
+            case 'fact':
                 if (!this._factStmt) {
                     this._factStmt = this.db.prepare('SELECT subject, predicate, object FROM facts WHERE id = ?');
                 }
                 const fact = this._factStmt.get(sourceId);
                 content = fact ? `${fact.subject}:${fact.predicate}:${fact.object}` : '';
                 break;
-            }
         }
         return crypto.createHash('sha256').update(content).digest('hex');
     }
@@ -513,7 +505,7 @@ export class ExplainableRecall {
     /**
      * Determine reason for inclusion
      */
-    determineReason(chunk, _requirements) {
+    determineReason(chunk, requirements) {
         if (chunk.relevance > 0.9)
             return 'semantic_match';
         if (chunk.relevance > 0.7)

package/dist/src/controllers/ExplainableRecall.js.map

@@ -1 +1 @@
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