@wentorai/research-plugins 1.3.2 → 1.4.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (229) hide show
  1. package/README.md +32 -56
  2. package/curated/analysis/README.md +1 -13
  3. package/curated/domains/README.md +1 -5
  4. package/curated/literature/README.md +1 -10
  5. package/curated/research/README.md +1 -18
  6. package/curated/tools/README.md +1 -12
  7. package/curated/writing/README.md +1 -5
  8. package/index.ts +88 -5
  9. package/openclaw.plugin.json +3 -12
  10. package/package.json +3 -5
  11. package/skills/analysis/statistics/SKILL.md +1 -1
  12. package/skills/analysis/statistics/meta-analysis-guide/SKILL.md +1 -1
  13. package/skills/domains/ai-ml/SKILL.md +3 -2
  14. package/skills/domains/ai-ml/generative-ai-guide/SKILL.md +1 -0
  15. package/skills/domains/ai-ml/huggingface-api/SKILL.md +251 -0
  16. package/skills/domains/biomedical/SKILL.md +9 -2
  17. package/skills/domains/biomedical/alphafold-api/SKILL.md +227 -0
  18. package/skills/domains/biomedical/biothings-api/SKILL.md +296 -0
  19. package/skills/domains/biomedical/clinicaltrials-api-v2/SKILL.md +216 -0
  20. package/skills/domains/biomedical/enrichr-api/SKILL.md +264 -0
  21. package/skills/domains/biomedical/ensembl-rest-api/SKILL.md +204 -0
  22. package/skills/domains/biomedical/medical-data-api/SKILL.md +197 -0
  23. package/skills/domains/biomedical/pdb-structure-api/SKILL.md +219 -0
  24. package/skills/domains/business/SKILL.md +2 -3
  25. package/skills/domains/chemistry/SKILL.md +3 -2
  26. package/skills/domains/chemistry/catalysis-hub-api/SKILL.md +171 -0
  27. package/skills/domains/education/SKILL.md +2 -3
  28. package/skills/domains/law/SKILL.md +3 -2
  29. package/skills/domains/law/uk-legislation-api/SKILL.md +179 -0
  30. package/skills/literature/fulltext/SKILL.md +3 -2
  31. package/skills/literature/fulltext/arxiv-latex-source/SKILL.md +195 -0
  32. package/skills/literature/search/SKILL.md +2 -3
  33. package/skills/research/automation/SKILL.md +2 -3
  34. package/skills/research/automation/datagen-research-guide/SKILL.md +1 -0
  35. package/skills/research/automation/mle-agent-guide/SKILL.md +1 -0
  36. package/skills/research/automation/paper-to-agent-guide/SKILL.md +1 -0
  37. package/skills/research/deep-research/auto-deep-research-guide/SKILL.md +1 -0
  38. package/skills/research/methodology/SKILL.md +1 -1
  39. package/skills/research/methodology/claude-scientific-guide/SKILL.md +1 -0
  40. package/skills/research/methodology/qualitative-research-guide/SKILL.md +1 -1
  41. package/skills/research/paper-review/SKILL.md +1 -1
  42. package/skills/research/paper-review/peer-review-guide/SKILL.md +1 -1
  43. package/skills/tools/knowledge-graph/SKILL.md +2 -3
  44. package/skills/tools/ocr-translate/zotero-pdf2zh-guide/SKILL.md +1 -0
  45. package/skills/writing/citation/obsidian-citation-guide/SKILL.md +1 -0
  46. package/skills/writing/citation/obsidian-zotero-guide/SKILL.md +1 -0
  47. package/skills/writing/citation/papersgpt-zotero-guide/SKILL.md +1 -0
  48. package/skills/writing/citation/zotero-mdnotes-guide/SKILL.md +1 -0
  49. package/skills/writing/citation/zotero-reference-guide/SKILL.md +1 -0
  50. package/skills/writing/composition/scientific-writing-resources/SKILL.md +1 -0
  51. package/skills/writing/latex/latex-drawing-collection/SKILL.md +1 -0
  52. package/skills/writing/latex/latex-templates-collection/SKILL.md +1 -0
  53. package/skills/writing/templates/novathesis-guide/SKILL.md +1 -0
  54. package/src/tools/arxiv.ts +78 -30
  55. package/src/tools/biorxiv.ts +142 -0
  56. package/src/tools/crossref.ts +60 -22
  57. package/src/tools/datacite.ts +188 -0
  58. package/src/tools/dblp.ts +125 -0
  59. package/src/tools/doaj.ts +82 -0
  60. package/src/tools/europe-pmc.ts +159 -0
  61. package/src/tools/hal.ts +118 -0
  62. package/src/tools/inspire-hep.ts +165 -0
  63. package/src/tools/openaire.ts +158 -0
  64. package/src/tools/openalex.ts +20 -15
  65. package/src/tools/opencitations.ts +103 -0
  66. package/src/tools/orcid.ts +136 -0
  67. package/src/tools/osf-preprints.ts +104 -0
  68. package/src/tools/pubmed.ts +19 -13
  69. package/src/tools/ror.ts +118 -0
  70. package/src/tools/unpaywall.ts +12 -6
  71. package/src/tools/util.ts +141 -0
  72. package/src/tools/zenodo.ts +154 -0
  73. package/mcp-configs/academic-db/ChatSpatial.json +0 -17
  74. package/mcp-configs/academic-db/academia-mcp.json +0 -17
  75. package/mcp-configs/academic-db/academic-paper-explorer.json +0 -17
  76. package/mcp-configs/academic-db/academic-search-mcp-server.json +0 -17
  77. package/mcp-configs/academic-db/agentinterviews-mcp.json +0 -17
  78. package/mcp-configs/academic-db/all-in-mcp.json +0 -17
  79. package/mcp-configs/academic-db/alphafold-mcp.json +0 -20
  80. package/mcp-configs/academic-db/apple-health-mcp.json +0 -17
  81. package/mcp-configs/academic-db/arxiv-latex-mcp.json +0 -17
  82. package/mcp-configs/academic-db/arxiv-mcp-server.json +0 -17
  83. package/mcp-configs/academic-db/bgpt-mcp.json +0 -17
  84. package/mcp-configs/academic-db/biomcp.json +0 -17
  85. package/mcp-configs/academic-db/biothings-mcp.json +0 -17
  86. package/mcp-configs/academic-db/brightspace-mcp.json +0 -21
  87. package/mcp-configs/academic-db/catalysishub-mcp-server.json +0 -17
  88. package/mcp-configs/academic-db/climatiq-mcp.json +0 -20
  89. package/mcp-configs/academic-db/clinicaltrialsgov-mcp-server.json +0 -17
  90. package/mcp-configs/academic-db/deep-research-mcp.json +0 -17
  91. package/mcp-configs/academic-db/dicom-mcp.json +0 -17
  92. package/mcp-configs/academic-db/enrichr-mcp-server.json +0 -17
  93. package/mcp-configs/academic-db/fec-mcp-server.json +0 -17
  94. package/mcp-configs/academic-db/fhir-mcp-server-themomentum.json +0 -17
  95. package/mcp-configs/academic-db/fhir-mcp.json +0 -19
  96. package/mcp-configs/academic-db/gget-mcp.json +0 -17
  97. package/mcp-configs/academic-db/gibs-mcp.json +0 -20
  98. package/mcp-configs/academic-db/gis-mcp-server.json +0 -22
  99. package/mcp-configs/academic-db/google-earth-engine-mcp.json +0 -21
  100. package/mcp-configs/academic-db/google-researcher-mcp.json +0 -17
  101. package/mcp-configs/academic-db/idea-reality-mcp.json +0 -17
  102. package/mcp-configs/academic-db/legiscan-mcp.json +0 -19
  103. package/mcp-configs/academic-db/lex.json +0 -17
  104. package/mcp-configs/academic-db/m4-clinical-mcp.json +0 -21
  105. package/mcp-configs/academic-db/medical-mcp.json +0 -21
  106. package/mcp-configs/academic-db/nexonco-mcp.json +0 -20
  107. package/mcp-configs/academic-db/omop-mcp.json +0 -20
  108. package/mcp-configs/academic-db/onekgpd-mcp.json +0 -20
  109. package/mcp-configs/academic-db/openedu-mcp.json +0 -20
  110. package/mcp-configs/academic-db/opengenes-mcp.json +0 -20
  111. package/mcp-configs/academic-db/openstax-mcp.json +0 -21
  112. package/mcp-configs/academic-db/openstreetmap-mcp.json +0 -21
  113. package/mcp-configs/academic-db/opentargets-mcp.json +0 -21
  114. package/mcp-configs/academic-db/pdb-mcp.json +0 -21
  115. package/mcp-configs/academic-db/smithsonian-mcp.json +0 -20
  116. package/mcp-configs/ai-platform/Adaptive-Graph-of-Thoughts-MCP-server.json +0 -17
  117. package/mcp-configs/ai-platform/ai-counsel.json +0 -17
  118. package/mcp-configs/ai-platform/atlas-mcp-server.json +0 -17
  119. package/mcp-configs/ai-platform/counsel-mcp.json +0 -17
  120. package/mcp-configs/ai-platform/cross-llm-mcp.json +0 -17
  121. package/mcp-configs/ai-platform/gptr-mcp.json +0 -17
  122. package/mcp-configs/ai-platform/magi-researchers.json +0 -21
  123. package/mcp-configs/ai-platform/mcp-academic-researcher.json +0 -22
  124. package/mcp-configs/ai-platform/open-paper-machine.json +0 -21
  125. package/mcp-configs/ai-platform/paper-intelligence.json +0 -21
  126. package/mcp-configs/ai-platform/paper-reader.json +0 -21
  127. package/mcp-configs/ai-platform/paperdebugger.json +0 -21
  128. package/mcp-configs/browser/decipher-research-agent.json +0 -17
  129. package/mcp-configs/browser/deep-research.json +0 -17
  130. package/mcp-configs/browser/everything-claude-code.json +0 -17
  131. package/mcp-configs/browser/exa-mcp.json +0 -20
  132. package/mcp-configs/browser/gpt-researcher.json +0 -17
  133. package/mcp-configs/browser/heurist-agent-framework.json +0 -17
  134. package/mcp-configs/browser/mcp-searxng.json +0 -21
  135. package/mcp-configs/browser/mcp-webresearch.json +0 -20
  136. package/mcp-configs/cloud-docs/confluence-mcp.json +0 -37
  137. package/mcp-configs/cloud-docs/google-drive-mcp.json +0 -35
  138. package/mcp-configs/cloud-docs/notion-mcp.json +0 -29
  139. package/mcp-configs/communication/discord-mcp.json +0 -29
  140. package/mcp-configs/communication/discourse-mcp.json +0 -21
  141. package/mcp-configs/communication/slack-mcp.json +0 -29
  142. package/mcp-configs/communication/telegram-mcp.json +0 -28
  143. package/mcp-configs/data-platform/4everland-hosting-mcp.json +0 -17
  144. package/mcp-configs/data-platform/automl-stat-mcp.json +0 -21
  145. package/mcp-configs/data-platform/context-keeper.json +0 -17
  146. package/mcp-configs/data-platform/context7.json +0 -19
  147. package/mcp-configs/data-platform/contextstream-mcp.json +0 -17
  148. package/mcp-configs/data-platform/email-mcp.json +0 -17
  149. package/mcp-configs/data-platform/jefferson-stats-mcp.json +0 -22
  150. package/mcp-configs/data-platform/mcp-excel-server.json +0 -21
  151. package/mcp-configs/data-platform/mcp-stata.json +0 -21
  152. package/mcp-configs/data-platform/mcpstack-jupyter.json +0 -21
  153. package/mcp-configs/data-platform/ml-mcp.json +0 -21
  154. package/mcp-configs/data-platform/nasdaq-data-link-mcp.json +0 -20
  155. package/mcp-configs/data-platform/numpy-mcp.json +0 -21
  156. package/mcp-configs/database/neo4j-mcp.json +0 -37
  157. package/mcp-configs/database/postgres-mcp.json +0 -28
  158. package/mcp-configs/database/sqlite-mcp.json +0 -29
  159. package/mcp-configs/dev-platform/geogebra-mcp.json +0 -21
  160. package/mcp-configs/dev-platform/github-mcp.json +0 -31
  161. package/mcp-configs/dev-platform/gitlab-mcp.json +0 -34
  162. package/mcp-configs/dev-platform/latex-mcp-server.json +0 -21
  163. package/mcp-configs/dev-platform/manim-mcp.json +0 -20
  164. package/mcp-configs/dev-platform/mcp-echarts.json +0 -20
  165. package/mcp-configs/dev-platform/panel-viz-mcp.json +0 -20
  166. package/mcp-configs/dev-platform/paperbanana.json +0 -20
  167. package/mcp-configs/dev-platform/texflow-mcp.json +0 -20
  168. package/mcp-configs/dev-platform/texmcp.json +0 -20
  169. package/mcp-configs/dev-platform/typst-mcp.json +0 -21
  170. package/mcp-configs/dev-platform/vizro-mcp.json +0 -20
  171. package/mcp-configs/email/email-mcp.json +0 -40
  172. package/mcp-configs/email/gmail-mcp.json +0 -37
  173. package/mcp-configs/note-knowledge/ApeRAG.json +0 -17
  174. package/mcp-configs/note-knowledge/In-Memoria.json +0 -17
  175. package/mcp-configs/note-knowledge/agent-memory.json +0 -17
  176. package/mcp-configs/note-knowledge/aimemo.json +0 -17
  177. package/mcp-configs/note-knowledge/biel-mcp.json +0 -19
  178. package/mcp-configs/note-knowledge/cognee.json +0 -17
  179. package/mcp-configs/note-knowledge/context-awesome.json +0 -17
  180. package/mcp-configs/note-knowledge/context-mcp.json +0 -17
  181. package/mcp-configs/note-knowledge/conversation-handoff-mcp.json +0 -17
  182. package/mcp-configs/note-knowledge/cortex.json +0 -17
  183. package/mcp-configs/note-knowledge/devrag.json +0 -17
  184. package/mcp-configs/note-knowledge/easy-obsidian-mcp.json +0 -17
  185. package/mcp-configs/note-knowledge/engram.json +0 -17
  186. package/mcp-configs/note-knowledge/gnosis-mcp.json +0 -17
  187. package/mcp-configs/note-knowledge/graphlit-mcp-server.json +0 -19
  188. package/mcp-configs/note-knowledge/local-faiss-mcp.json +0 -21
  189. package/mcp-configs/note-knowledge/mcp-memory-service.json +0 -21
  190. package/mcp-configs/note-knowledge/mcp-obsidian.json +0 -23
  191. package/mcp-configs/note-knowledge/mcp-ragdocs.json +0 -20
  192. package/mcp-configs/note-knowledge/mcp-summarizer.json +0 -21
  193. package/mcp-configs/note-knowledge/mediawiki-mcp.json +0 -21
  194. package/mcp-configs/note-knowledge/openzim-mcp.json +0 -20
  195. package/mcp-configs/note-knowledge/zettelkasten-mcp.json +0 -21
  196. package/mcp-configs/reference-mgr/academic-paper-mcp-http.json +0 -20
  197. package/mcp-configs/reference-mgr/academix.json +0 -20
  198. package/mcp-configs/reference-mgr/arxiv-cli.json +0 -17
  199. package/mcp-configs/reference-mgr/arxiv-research-mcp.json +0 -21
  200. package/mcp-configs/reference-mgr/arxiv-search-mcp.json +0 -17
  201. package/mcp-configs/reference-mgr/chiken.json +0 -17
  202. package/mcp-configs/reference-mgr/claude-scholar.json +0 -17
  203. package/mcp-configs/reference-mgr/devonthink-mcp.json +0 -17
  204. package/mcp-configs/reference-mgr/google-scholar-abstract-mcp.json +0 -19
  205. package/mcp-configs/reference-mgr/google-scholar-mcp.json +0 -20
  206. package/mcp-configs/reference-mgr/mcp-paperswithcode.json +0 -21
  207. package/mcp-configs/reference-mgr/mcp-scholarly.json +0 -20
  208. package/mcp-configs/reference-mgr/mcp-simple-arxiv.json +0 -20
  209. package/mcp-configs/reference-mgr/mcp-simple-pubmed.json +0 -20
  210. package/mcp-configs/reference-mgr/mcp-zotero.json +0 -21
  211. package/mcp-configs/reference-mgr/mendeley-mcp.json +0 -20
  212. package/mcp-configs/reference-mgr/ncbi-mcp-server.json +0 -22
  213. package/mcp-configs/reference-mgr/onecite.json +0 -21
  214. package/mcp-configs/reference-mgr/paper-search-mcp.json +0 -21
  215. package/mcp-configs/reference-mgr/pubmed-search-mcp.json +0 -21
  216. package/mcp-configs/reference-mgr/scholar-mcp.json +0 -21
  217. package/mcp-configs/reference-mgr/scholar-multi-mcp.json +0 -21
  218. package/mcp-configs/reference-mgr/seerai.json +0 -21
  219. package/mcp-configs/reference-mgr/semantic-scholar-fastmcp.json +0 -21
  220. package/mcp-configs/reference-mgr/sourcelibrary.json +0 -20
  221. package/mcp-configs/registry.json +0 -476
  222. package/mcp-configs/repository/dataverse-mcp.json +0 -33
  223. package/mcp-configs/repository/huggingface-mcp.json +0 -29
  224. package/skills/domains/business/xpert-bi-guide/SKILL.md +0 -84
  225. package/skills/domains/education/edumcp-guide/SKILL.md +0 -74
  226. package/skills/literature/search/paper-search-mcp-guide/SKILL.md +0 -107
  227. package/skills/research/automation/mcp-server-guide/SKILL.md +0 -211
  228. package/skills/tools/knowledge-graph/paperpile-notion-guide/SKILL.md +0 -84
  229. package/src/tools/semantic-scholar.ts +0 -66
@@ -1,37 +0,0 @@
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- {
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- "id": "gmail-mcp",
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- "name": "Gmail MCP",
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- "description": "Gmail email integration — search, read, send, and manage emails through Gmail for academic correspondence and collaboration.",
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- "category": "email",
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- "install": {
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- "runtime": "node",
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- "package": "@anthropic/mcp-server-gmail",
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- "command": "npm install @anthropic/mcp-server-gmail"
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- },
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- "config": {
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- "env": {
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- "GOOGLE_CLIENT_ID": {
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- "description": "Google OAuth 2.0 client ID",
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- "required": true
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- },
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- "GOOGLE_CLIENT_SECRET": {
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- "description": "Google OAuth 2.0 client secret",
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- "required": true
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- },
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- "GOOGLE_REFRESH_TOKEN": {
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- "description": "Google OAuth 2.0 refresh token with Gmail scope",
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- "required": true
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- }
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- }
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- },
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- "tools": [
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- "search_emails",
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- "read_email",
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- "send_email",
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- "reply_to_email",
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- "list_labels",
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- "list_threads"
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- ],
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- "verified": false,
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- "source": "https://github.com/anthropics/mcp-server-gmail"
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- }
@@ -1,17 +0,0 @@
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- {
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- "id": "ApeRAG",
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- "name": "ApeRAG",
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- "description": "Production-ready RAG platform with Graph RAG and vector search for knowledge retrieval",
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- "category": "note-knowledge",
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- "install": {
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- "runtime": "python",
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- "package": "ApeRAG",
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- "command": "pip install aperag"
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- },
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- "config": {
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- "env": {}
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- },
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- "tools": ["ingest", "query", "search"],
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- "verified": false,
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- "source": "https://github.com/apecloud/ApeRAG"
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- }
@@ -1,17 +0,0 @@
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- {
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- "id": "In-Memoria",
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- "name": "In Memoria",
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- "description": "Persistent intelligence with cumulative memory and pattern recognition for AI agents",
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- "category": "note-knowledge",
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- "install": {
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- "runtime": "node",
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- "package": "in-memoria",
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- "command": "npx in-memoria"
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- },
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- "config": {
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- "env": {}
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- },
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- "tools": ["learn", "recall", "pattern"],
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- "verified": false,
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- "source": "https://github.com/pi22by7/In-Memoria"
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- }
@@ -1,17 +0,0 @@
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- {
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- "id": "agent-memory",
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- "name": "Agent Memory",
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- "description": "Three-layer memory system with semantic search and knowledge graph for AI agents",
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- "category": "note-knowledge",
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- "install": {
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- "runtime": "python",
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- "package": "agent-memory",
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- "command": "pip install agent-memory"
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- },
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- "config": {
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- "env": {}
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- },
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- "tools": ["save_memory", "recall", "search_graph"],
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- "verified": false,
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- "source": "https://github.com/g1itchbot8888-del/agent-memory"
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- }
@@ -1,17 +0,0 @@
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- {
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- "id": "aimemo",
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- "name": "AIMemo",
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- "description": "Zero-dependency MCP memory server, single binary, 100% local storage and recall",
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- "category": "note-knowledge",
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- "install": {
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- "runtime": "node",
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- "package": "github:MyAgentHubs/aimemo",
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- "command": "cargo install aimemo"
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- },
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- "config": {
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- "env": {}
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- },
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- "tools": ["remember", "recall", "store"],
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- "verified": false,
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- "source": "https://github.com/MyAgentHubs/aimemo"
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- }
@@ -1,19 +0,0 @@
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- {
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- "id": "biel-mcp",
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- "name": "Biel MCP",
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- "description": "Connect IDE to product documentation via Biel.ai RAG for instant knowledge retrieval",
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- "category": "note-knowledge",
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- "install": {
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- "runtime": "python",
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- "package": "biel-mcp",
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- "command": "pip install biel-mcp"
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- },
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- "config": {
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- "env": {
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- "BIEL_API_KEY": ""
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- }
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- },
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- "tools": ["query_docs", "search_knowledge"],
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- "verified": false,
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- "source": "https://github.com/TechDocsStudio/biel-mcp"
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- }
@@ -1,17 +0,0 @@
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- {
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- "id": "cognee",
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- "name": "Cognee",
4
- "description": "Memory manager using graph and vector stores with 30+ data sources for persistent agent knowledge",
5
- "category": "note-knowledge",
6
- "install": {
7
- "runtime": "python",
8
- "package": "cognee",
9
- "command": "pip install cognee"
10
- },
11
- "config": {
12
- "env": {}
13
- },
14
- "tools": ["ingest", "search", "get_graph"],
15
- "verified": false,
16
- "source": "https://github.com/topoteretes/cognee"
17
- }
@@ -1,17 +0,0 @@
1
- {
2
- "id": "context-awesome",
3
- "name": "Context Awesome",
4
- "description": "Query 8500+ curated awesome lists with 1M+ items for discovering tools and resources",
5
- "category": "note-knowledge",
6
- "install": {
7
- "runtime": "node",
8
- "package": "context-awesome",
9
- "command": "npx context-awesome"
10
- },
11
- "config": {
12
- "env": {}
13
- },
14
- "tools": ["find_awesome_section", "get_awesome_items"],
15
- "verified": false,
16
- "source": "https://github.com/bh-rat/context-awesome"
17
- }
@@ -1,17 +0,0 @@
1
- {
2
- "id": "context-mcp",
3
- "name": "Context MCP",
4
- "description": "Self-hosted MCP server for semantic search over documentation collections",
5
- "category": "note-knowledge",
6
- "install": {
7
- "runtime": "node",
8
- "package": "context-mcp",
9
- "command": "npx context-mcp"
10
- },
11
- "config": {
12
- "env": {}
13
- },
14
- "tools": ["index", "search", "retrieve"],
15
- "verified": false,
16
- "source": "https://github.com/dodopayments/context-mcp"
17
- }
@@ -1,17 +0,0 @@
1
- {
2
- "id": "conversation-handoff-mcp",
3
- "name": "Conversation Handoff MCP",
4
- "description": "Hand off conversation context between Claude Desktop projects seamlessly",
5
- "category": "note-knowledge",
6
- "install": {
7
- "runtime": "node",
8
- "package": "conversation-handoff-mcp",
9
- "command": "npx conversation-handoff-mcp"
10
- },
11
- "config": {
12
- "env": {}
13
- },
14
- "tools": ["handoff", "receive", "clear"],
15
- "verified": false,
16
- "source": "https://github.com/trust-delta/conversation-handoff-mcp"
17
- }
@@ -1,17 +0,0 @@
1
- {
2
- "id": "cortex",
3
- "name": "Cortex",
4
- "description": "Local-first knowledge graph for developers with query, find, and watch capabilities",
5
- "category": "note-knowledge",
6
- "install": {
7
- "runtime": "node",
8
- "package": "cortex",
9
- "command": "npx cortex"
10
- },
11
- "config": {
12
- "env": {}
13
- },
14
- "tools": ["query", "find", "watch"],
15
- "verified": false,
16
- "source": "https://github.com/gzoonet/cortex"
17
- }
@@ -1,17 +0,0 @@
1
- {
2
- "id": "devrag",
3
- "name": "DevRAG",
4
- "description": "Lightweight local RAG for semantic search over markdown files and documentation",
5
- "category": "note-knowledge",
6
- "install": {
7
- "runtime": "node",
8
- "package": "github:tomohiro-owada/devrag",
9
- "command": "go install github.com/tomohiro-owada/devrag@latest"
10
- },
11
- "config": {
12
- "env": {}
13
- },
14
- "tools": ["index", "search"],
15
- "verified": false,
16
- "source": "https://github.com/tomohiro-owada/devrag"
17
- }
@@ -1,17 +0,0 @@
1
- {
2
- "id": "easy-obsidian-mcp",
3
- "name": "Easy Obsidian MCP",
4
- "description": "Interact with Obsidian vaults through MCP for reading, writing, and searching notes",
5
- "category": "note-knowledge",
6
- "install": {
7
- "runtime": "python",
8
- "package": "easy-obsidian-mcp",
9
- "command": "pip install easy-obsidian-mcp"
10
- },
11
- "config": {
12
- "env": {}
13
- },
14
- "tools": ["search", "read", "write", "append"],
15
- "verified": false,
16
- "source": "https://github.com/louis030195/easy-obsidian-mcp"
17
- }
@@ -1,17 +0,0 @@
1
- {
2
- "id": "engram",
3
- "name": "Engram",
4
- "description": "Intelligence layer for AI agents with explicit and implicit memory consolidation",
5
- "category": "note-knowledge",
6
- "install": {
7
- "runtime": "node",
8
- "package": "engram",
9
- "command": "npx engram"
10
- },
11
- "config": {
12
- "env": {}
13
- },
14
- "tools": ["remember", "recall", "consolidate", "get_insights"],
15
- "verified": false,
16
- "source": "https://github.com/tstockham96/engram"
17
- }
@@ -1,17 +0,0 @@
1
- {
2
- "id": "gnosis-mcp",
3
- "name": "Gnosis MCP",
4
- "description": "Zero-config MCP server for searchable documentation with automatic indexing",
5
- "category": "note-knowledge",
6
- "install": {
7
- "runtime": "python",
8
- "package": "gnosis-mcp",
9
- "command": "pip install gnosis-mcp"
10
- },
11
- "config": {
12
- "env": {}
13
- },
14
- "tools": ["load", "search", "query"],
15
- "verified": false,
16
- "source": "https://github.com/nicholasglazer/gnosis-mcp"
17
- }
@@ -1,19 +0,0 @@
1
- {
2
- "id": "graphlit-mcp-server",
3
- "name": "Graphlit MCP Server",
4
- "description": "Ingest from Slack, Discord, Drive, and GitHub into a RAG-ready knowledge base",
5
- "category": "note-knowledge",
6
- "install": {
7
- "runtime": "node",
8
- "package": "graphlit-mcp-server",
9
- "command": "npx graphlit-mcp-server"
10
- },
11
- "config": {
12
- "env": {
13
- "GRAPHLIT_API_KEY": ""
14
- }
15
- },
16
- "tools": ["ingest", "retrieve", "query", "search"],
17
- "verified": false,
18
- "source": "https://github.com/graphlit/graphlit-mcp-server"
19
- }
@@ -1,21 +0,0 @@
1
- {
2
- "id": "local-faiss-mcp",
3
- "name": "Local FAISS MCP",
4
- "description": "Local FAISS vector database for RAG with document ingestion",
5
- "category": "note-knowledge",
6
- "install": {
7
- "runtime": "python",
8
- "package": "local-faiss-mcp",
9
- "command": "pip install local-faiss-mcp"
10
- },
11
- "config": {
12
- "env": {}
13
- },
14
- "tools": [
15
- "ingest",
16
- "search",
17
- "delete"
18
- ],
19
- "verified": false,
20
- "source": "https://github.com/jjohare/local_faiss_mcp"
21
- }
@@ -1,21 +0,0 @@
1
- {
2
- "id": "mcp-memory-service",
3
- "name": "Memory Service MCP",
4
- "description": "Universal memory with semantic search and autonomous consolidation",
5
- "category": "note-knowledge",
6
- "install": {
7
- "runtime": "node",
8
- "package": "mcp-memory-service",
9
- "command": "npm install -g mcp-memory-service"
10
- },
11
- "config": {
12
- "env": {}
13
- },
14
- "tools": [
15
- "store",
16
- "search",
17
- "consolidate"
18
- ],
19
- "verified": false,
20
- "source": "https://github.com/doobidoo/mcp-memory-service"
21
- }
@@ -1,23 +0,0 @@
1
- {
2
- "id": "mcp-obsidian",
3
- "name": "Obsidian Vault MCP",
4
- "description": "Read and search Markdown notes in Obsidian vaults",
5
- "category": "note-knowledge",
6
- "install": {
7
- "runtime": "node",
8
- "package": "mcp-obsidian",
9
- "command": "npm install -g mcp-obsidian"
10
- },
11
- "config": {
12
- "env": {
13
- "VAULT_PATH": "~/ObsidianVault"
14
- }
15
- },
16
- "tools": [
17
- "search",
18
- "read_note",
19
- "list_notes"
20
- ],
21
- "verified": false,
22
- "source": "https://github.com/calclavia/mcp-obsidian"
23
- }
@@ -1,20 +0,0 @@
1
- {
2
- "id": "mcp-ragdocs",
3
- "name": "RAG Docs MCP",
4
- "description": "Documentation retrieval through vector search",
5
- "category": "note-knowledge",
6
- "install": {
7
- "runtime": "node",
8
- "package": "mcp-ragdocs",
9
- "command": "npm install -g mcp-ragdocs"
10
- },
11
- "config": {
12
- "env": {}
13
- },
14
- "tools": [
15
- "ingest",
16
- "search"
17
- ],
18
- "verified": false,
19
- "source": "https://github.com/hannesrudolph/mcp-ragdocs"
20
- }
@@ -1,21 +0,0 @@
1
- {
2
- "id": "mcp-summarizer",
3
- "name": "Summarizer MCP",
4
- "description": "AI summarization for text, web, PDF, EPUB content",
5
- "category": "note-knowledge",
6
- "install": {
7
- "runtime": "node",
8
- "package": "mcp-summarizer",
9
- "command": "npm install -g mcp-summarizer"
10
- },
11
- "config": {
12
- "env": {}
13
- },
14
- "tools": [
15
- "summarize_text",
16
- "summarize_url",
17
- "summarize_pdf"
18
- ],
19
- "verified": false,
20
- "source": "https://github.com/jjohare/mcp-summarizer"
21
- }
@@ -1,21 +0,0 @@
1
- {
2
- "id": "mediawiki-mcp",
3
- "name": "MediaWiki MCP",
4
- "description": "Connect to any MediaWiki wiki including Wikipedia",
5
- "category": "note-knowledge",
6
- "install": {
7
- "runtime": "node",
8
- "package": "mediawiki-mcp-server",
9
- "command": "npm install -g mediawiki-mcp-server"
10
- },
11
- "config": {
12
- "env": {}
13
- },
14
- "tools": [
15
- "search",
16
- "get_page",
17
- "get_categories"
18
- ],
19
- "verified": false,
20
- "source": "https://github.com/jjohare/mediawiki-mcp-server"
21
- }
@@ -1,20 +0,0 @@
1
- {
2
- "id": "openzim-mcp",
3
- "name": "OpenZIM Offline Knowledge MCP",
4
- "description": "ZIM format knowledge bases offline (Wikipedia, educational)",
5
- "category": "note-knowledge",
6
- "install": {
7
- "runtime": "python",
8
- "package": "openzim-mcp",
9
- "command": "pip install openzim-mcp"
10
- },
11
- "config": {
12
- "env": {}
13
- },
14
- "tools": [
15
- "search",
16
- "get_article"
17
- ],
18
- "verified": false,
19
- "source": "https://github.com/jjohare/openzim-mcp"
20
- }
@@ -1,21 +0,0 @@
1
- {
2
- "id": "zettelkasten-mcp",
3
- "name": "Zettelkasten MCP",
4
- "description": "Zettelkasten knowledge management methodology via MCP",
5
- "category": "note-knowledge",
6
- "install": {
7
- "runtime": "node",
8
- "package": "zettelkasten-mcp",
9
- "command": "npm install -g zettelkasten-mcp"
10
- },
11
- "config": {
12
- "env": {}
13
- },
14
- "tools": [
15
- "create_note",
16
- "link_notes",
17
- "search"
18
- ],
19
- "verified": false,
20
- "source": "https://github.com/jjohare/zettelkasten-mcp"
21
- }
@@ -1,20 +0,0 @@
1
- {
2
- "id": "academic-paper-mcp-http",
3
- "name": "Academic Paper MCP (HTTP)",
4
- "description": "HTTP/SSE academic literature search aggregating multiple sources",
5
- "category": "reference-mgr",
6
- "install": {
7
- "runtime": "python",
8
- "package": "academic-paper-mcp-http",
9
- "command": "pip install academic-paper-mcp-http"
10
- },
11
- "config": {
12
- "env": {}
13
- },
14
- "tools": [
15
- "search",
16
- "get_paper"
17
- ],
18
- "verified": false,
19
- "source": "https://github.com/lsgrep/academic-paper-mcp-http"
20
- }
@@ -1,20 +0,0 @@
1
- {
2
- "id": "academix",
3
- "name": "Academix MCP",
4
- "description": "Paper search and citation analysis via OpenAlex, DBLP, Semantic Scholar",
5
- "category": "reference-mgr",
6
- "install": {
7
- "runtime": "node",
8
- "package": "academix",
9
- "command": "npm install -g academix"
10
- },
11
- "config": {
12
- "env": {}
13
- },
14
- "tools": [
15
- "search",
16
- "analyze_citations"
17
- ],
18
- "verified": false,
19
- "source": "https://github.com/janduplessis883/Academix"
20
- }
@@ -1,17 +0,0 @@
1
- {
2
- "id": "arxiv-cli",
3
- "name": "arXiv CLI",
4
- "description": "AI-ready search and fetch tool for arXiv papers",
5
- "category": "reference-mgr",
6
- "install": {
7
- "runtime": "rust",
8
- "package": "arxiv-cli",
9
- "command": "cargo install arxiv-cli"
10
- },
11
- "config": {
12
- "env": {}
13
- },
14
- "tools": ["search", "fetch"],
15
- "verified": false,
16
- "source": "https://github.com/sonesuke/arxiv-cli"
17
- }
@@ -1,21 +0,0 @@
1
- {
2
- "id": "arxiv-research-mcp",
3
- "name": "arXiv Research MCP",
4
- "description": "AI-powered arXiv search with ranking, full-text, and caching",
5
- "category": "reference-mgr",
6
- "install": {
7
- "runtime": "python",
8
- "package": "arxiv-research-mcp",
9
- "command": "pip install arxiv-research-mcp"
10
- },
11
- "config": {
12
- "env": {}
13
- },
14
- "tools": [
15
- "search",
16
- "rank",
17
- "get_fulltext"
18
- ],
19
- "verified": false,
20
- "source": "https://github.com/lusob/arxiv-research-mcp"
21
- }
@@ -1,17 +0,0 @@
1
- {
2
- "id": "arxiv-search-mcp",
3
- "name": "arXiv Search MCP",
4
- "description": "Search and fetch papers from arXiv.org",
5
- "category": "reference-mgr",
6
- "install": {
7
- "runtime": "node",
8
- "package": "arxiv-search-mcp",
9
- "command": "npm install -g arxiv-search-mcp"
10
- },
11
- "config": {
12
- "env": {}
13
- },
14
- "tools": ["search", "fetch"],
15
- "verified": false,
16
- "source": "https://github.com/danimal141/arxiv-search-mcp"
17
- }
@@ -1,17 +0,0 @@
1
- {
2
- "id": "chiken",
3
- "name": "Chiken",
4
- "description": "Zotero, RAG, MCP, and deep research",
5
- "category": "reference-mgr",
6
- "install": {
7
- "runtime": "python",
8
- "package": "chiken",
9
- "command": "pip install chiken"
10
- },
11
- "config": {
12
- "env": {}
13
- },
14
- "tools": ["search", "annotate"],
15
- "verified": false,
16
- "source": "https://github.com/yuanjua/chiken"
17
- }
@@ -1,17 +0,0 @@
1
- {
2
- "id": "claude-scholar",
3
- "name": "Claude Scholar",
4
- "description": "Academic research config with Zotero MCP integration",
5
- "category": "reference-mgr",
6
- "install": {
7
- "runtime": "python",
8
- "package": "claude-scholar",
9
- "command": "pip install claude-scholar"
10
- },
11
- "config": {
12
- "env": {}
13
- },
14
- "tools": ["search_library", "get_citation"],
15
- "verified": false,
16
- "source": "https://github.com/Galaxy-Dawn/claude-scholar"
17
- }
@@ -1,17 +0,0 @@
1
- {
2
- "id": "devonthink-mcp",
3
- "name": "DEVONthink MCP",
4
- "description": "DEVONthink with bibliography metadata and AI classification",
5
- "category": "reference-mgr",
6
- "install": {
7
- "runtime": "node",
8
- "package": "devonthink-mcp",
9
- "command": "npm install -g devonthink-mcp"
10
- },
11
- "config": {
12
- "env": {}
13
- },
14
- "tools": ["is_running", "create_record", "search", "get_bib_metadata", "classify"],
15
- "verified": false,
16
- "source": "https://github.com/TomBener/devonthink-mcp"
17
- }