@wentorai/research-plugins 1.3.2 → 1.4.0

package/mcp-configs/academic-db/biomcp.json

@@ -1,17 +0,0 @@
-{
-  "id": "biomcp",
-  "name": "BioMCP",
-  "description": "Biomedical research MCP for PubMed, ClinicalTrials, and MyVariant",
-  "category": "academic-db",
-  "install": {
-    "runtime": "python",
-    "package": "biomcp",
-    "command": "pip install biomcp"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": ["search_pubmed", "search_clinical_trials", "search_variants"],
-  "verified": false,
-  "source": "https://github.com/genomoncology/biomcp"
-}

package/mcp-configs/academic-db/biothings-mcp.json

@@ -1,17 +0,0 @@
-{
-  "id": "biothings-mcp",
-  "name": "BioThings API",
-  "description": "BioThings API for genes, variants, drugs, and taxonomy",
-  "category": "academic-db",
-  "install": {
-    "runtime": "python",
-    "package": "biothings-mcp",
-    "command": "pip install biothings-mcp"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": ["gene_query", "variant_query", "drug_query"],
-  "verified": false,
-  "source": "https://github.com/longevity-genie/biothings-mcp"
-}

package/mcp-configs/academic-db/brightspace-mcp.json

@@ -1,21 +0,0 @@
-{
-  "id": "brightspace-mcp",
-  "name": "Brightspace LMS MCP",
-  "description": "D2L Brightspace LMS: grades, assignments, announcements",
-  "category": "academic-db",
-  "install": {
-    "runtime": "node",
-    "package": "brightspace-mcp-server",
-    "command": "npm install -g brightspace-mcp-server"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "get_grades",
-    "get_assignments",
-    "get_announcements"
-  ],
-  "verified": false,
-  "source": "https://github.com/jjohare/brightspace-mcp-server"
-}

package/mcp-configs/academic-db/catalysishub-mcp-server.json

@@ -1,17 +0,0 @@
-{
-  "id": "catalysishub-mcp-server",
-  "name": "Catalysis Hub",
-  "description": "Search Catalysis Hub database for computational catalysis",
-  "category": "academic-db",
-  "install": {
-    "runtime": "python",
-    "package": "catalysishub-mcp-server",
-    "command": "pip install catalysishub-mcp-server"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": ["search_reactions", "get_surface_data"],
-  "verified": false,
-  "source": "https://github.com/QuentinCody/catalysishub-mcp-server"
-}

package/mcp-configs/academic-db/climatiq-mcp.json

@@ -1,20 +0,0 @@
-{
-  "id": "climatiq-mcp",
-  "name": "Climatiq Carbon MCP",
-  "description": "Carbon emissions calculations via Climatiq API",
-  "category": "academic-db",
-  "install": {
-    "runtime": "node",
-    "package": "climatiq-mcp-server",
-    "command": "npm install -g climatiq-mcp-server"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "estimate",
-    "get_factors"
-  ],
-  "verified": false,
-  "source": "https://github.com/Climatiq/climatiq-mcp-server"
-}

package/mcp-configs/academic-db/clinicaltrialsgov-mcp-server.json

@@ -1,17 +0,0 @@
-{
-  "id": "clinicaltrialsgov-mcp-server",
-  "name": "ClinicalTrials.gov",
-  "description": "ClinicalTrials.gov v2 API search and analysis",
-  "category": "academic-db",
-  "install": {
-    "runtime": "node",
-    "package": "clinicaltrialsgov-mcp-server",
-    "command": "npm install -g clinicaltrialsgov-mcp-server"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": ["search_studies", "get_study", "analyze_trends", "compare_studies", "find_eligible_studies"],
-  "verified": false,
-  "source": "https://github.com/cyanheads/clinicaltrialsgov-mcp-server"
-}

package/mcp-configs/academic-db/deep-research-mcp.json

@@ -1,17 +0,0 @@
-{
-  "id": "deep-research-mcp",
-  "name": "Deep Research",
-  "description": "Deep research via OpenAI or open models",
-  "category": "academic-db",
-  "install": {
-    "runtime": "python",
-    "package": "deep-research-mcp",
-    "command": "pip install deep-research-mcp"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": ["conduct_research", "analyze_sources", "generate_report"],
-  "verified": false,
-  "source": "https://github.com/pminervini/deep-research-mcp"
-}

package/mcp-configs/academic-db/dicom-mcp.json

@@ -1,17 +0,0 @@
-{
-  "id": "dicom-mcp",
-  "name": "DICOM Medical Imaging",
-  "description": "DICOM integration for medical imaging",
-  "category": "academic-db",
-  "install": {
-    "runtime": "python",
-    "package": "dicom-mcp",
-    "command": "pip install dicom-mcp"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": ["query_studies", "get_images", "move_images"],
-  "verified": false,
-  "source": "https://github.com/ChristianHinge/dicom-mcp"
-}

package/mcp-configs/academic-db/enrichr-mcp-server.json

@@ -1,17 +0,0 @@
-{
-  "id": "enrichr-mcp-server",
-  "name": "Enrichr Gene Set Analysis",
-  "description": "Gene set enrichment analysis using Enrichr API",
-  "category": "academic-db",
-  "install": {
-    "runtime": "node",
-    "package": "enrichr-mcp-server",
-    "command": "npm install -g enrichr-mcp-server"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": ["enrichr_analysis", "go_bp_enrichment"],
-  "verified": false,
-  "source": "https://github.com/tianqitang1/enrichr-mcp-server"
-}

package/mcp-configs/academic-db/fec-mcp-server.json

@@ -1,17 +0,0 @@
-{
-  "id": "fec-mcp-server",
-  "name": "FEC Campaign Finance",
-  "description": "Query FEC campaign finance data",
-  "category": "academic-db",
-  "install": {
-    "runtime": "node",
-    "package": "fec-mcp-server",
-    "command": "npm install -g fec-mcp-server"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": ["search_candidates", "track_donations"],
-  "verified": false,
-  "source": "https://github.com/sh-patterson/fec-mcp-server"
-}

package/mcp-configs/academic-db/fhir-mcp-server-themomentum.json

@@ -1,17 +0,0 @@
-{
-  "id": "fhir-mcp-server-themomentum",
-  "name": "FHIR Patient History",
-  "description": "FHIR server for patient history queries",
-  "category": "academic-db",
-  "install": {
-    "runtime": "python",
-    "package": "fhir-mcp-server",
-    "command": "pip install fhir-mcp-server"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": ["query_patient", "search_resources", "get_history"],
-  "verified": false,
-  "source": "https://github.com/the-momentum/fhir-mcp-server"
-}

package/mcp-configs/academic-db/fhir-mcp.json

@@ -1,19 +0,0 @@
-{
-  "id": "fhir-mcp",
-  "name": "FHIR Healthcare API",
-  "description": "FHIR API for healthcare data interoperability",
-  "category": "academic-db",
-  "install": {
-    "runtime": "python",
-    "package": "fhir-mcp-server",
-    "command": "pip install fhir-mcp-server"
-  },
-  "config": {
-    "env": {
-      "FHIR_SERVER_URL": ""
-    }
-  },
-  "tools": ["search_patients", "get_patient_history", "create_observation"],
-  "verified": false,
-  "source": "https://github.com/wso2/fhir-mcp-server"
-}

package/mcp-configs/academic-db/gget-mcp.json

@@ -1,17 +0,0 @@
-{
-  "id": "gget-mcp",
-  "name": "gget Bioinformatics",
-  "description": "Bioinformatics toolkit for genomics queries",
-  "category": "academic-db",
-  "install": {
-    "runtime": "python",
-    "package": "gget-mcp",
-    "command": "pip install gget-mcp"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": ["gget_search", "gget_info", "gget_seq", "gget_blast"],
-  "verified": false,
-  "source": "https://github.com/longevity-genie/gget-mcp"
-}

package/mcp-configs/academic-db/gibs-mcp.json

@@ -1,20 +0,0 @@
-{
-  "id": "gibs-mcp",
-  "name": "GIBS Regulatory MCP",
-  "description": "Regulatory compliance search (AI Act, GDPR, DORA) with citations",
-  "category": "academic-db",
-  "install": {
-    "runtime": "node",
-    "package": "gibs-mcp",
-    "command": "npm install -g gibs-mcp"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "search_regulation",
-    "get_article"
-  ],
-  "verified": false,
-  "source": "https://github.com/jjohare/gibs-mcp"
-}

package/mcp-configs/academic-db/gis-mcp-server.json

@@ -1,22 +0,0 @@
-{
-  "id": "gis-mcp-server",
-  "name": "GIS MCP Server",
-  "description": "Geocoding, routing, elevation, spatial analysis, Shapefile/GeoJSON",
-  "category": "academic-db",
-  "install": {
-    "runtime": "python",
-    "package": "gis-mcp-server",
-    "command": "pip install gis-mcp-server"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "geocode",
-    "route",
-    "elevation",
-    "spatial_analysis"
-  ],
-  "verified": false,
-  "source": "https://github.com/jjohare/gis-mcp-server"
-}

package/mcp-configs/academic-db/google-earth-engine-mcp.json

@@ -1,21 +0,0 @@
-{
-  "id": "google-earth-engine-mcp",
-  "name": "Google Earth Engine MCP",
-  "description": "Query Google Earth Engine with natural language",
-  "category": "academic-db",
-  "install": {
-    "runtime": "python",
-    "package": "google-earth-engine-mcp",
-    "command": "pip install google-earth-engine-mcp"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "query",
-    "get_dataset",
-    "analyze"
-  ],
-  "verified": false,
-  "source": "https://github.com/jjohare/google-earth-engine-mcp"
-}

package/mcp-configs/academic-db/google-researcher-mcp.json

@@ -1,17 +0,0 @@
-{
-  "id": "google-researcher-mcp",
-  "name": "Google Researcher",
-  "description": "Comprehensive research tools for web, academic, patents",
-  "category": "academic-db",
-  "install": {
-    "runtime": "python",
-    "package": "google-researcher-mcp",
-    "command": "pip install google-researcher-mcp"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": ["search_web", "search_papers", "search_patents"],
-  "verified": false,
-  "source": "https://github.com/zoharbabin/google-researcher-mcp"
-}

package/mcp-configs/academic-db/idea-reality-mcp.json

@@ -1,17 +0,0 @@
-{
-  "id": "idea-reality-mcp",
-  "name": "Idea Reality Check",
-  "description": "Pre-build reality check detecting existing competition",
-  "category": "academic-db",
-  "install": {
-    "runtime": "python",
-    "package": "idea-reality-mcp",
-    "command": "pip install idea-reality-mcp"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": ["scan_github", "check_npm", "get_reality_score"],
-  "verified": false,
-  "source": "https://github.com/mnemox-ai/idea-reality-mcp"
-}

package/mcp-configs/academic-db/legiscan-mcp.json

@@ -1,19 +0,0 @@
-{
-  "id": "legiscan-mcp",
-  "name": "LegiScan",
-  "description": "Access legislative data from 50 US states",
-  "category": "academic-db",
-  "install": {
-    "runtime": "node",
-    "package": "legiscan-mcp",
-    "command": "npm install -g legiscan-mcp"
-  },
-  "config": {
-    "env": {
-      "LEGISCAN_API_KEY": ""
-    }
-  },
-  "tools": ["search_bills", "get_text", "track_votes"],
-  "verified": false,
-  "source": "https://github.com/sh-patterson/legiscan-mcp"
-}

package/mcp-configs/academic-db/lex.json

@@ -1,17 +0,0 @@
-{
-  "id": "lex",
-  "name": "Lex UK Legal API",
-  "description": "UK legal API for AI agents and researchers",
-  "category": "academic-db",
-  "install": {
-    "runtime": "python",
-    "package": "lex",
-    "command": "pip install lex"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": ["search_legislation"],
-  "verified": false,
-  "source": "https://github.com/i-dot-ai/lex"
-}

package/mcp-configs/academic-db/m4-clinical-mcp.json

@@ -1,21 +0,0 @@
-{
-  "id": "m4-clinical-mcp",
-  "name": "M4 Clinical Database MCP",
-  "description": "MIMIC-IV and eICU clinical database with domain knowledge",
-  "category": "academic-db",
-  "install": {
-    "runtime": "python",
-    "package": "m4",
-    "command": "pip install m4"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "query",
-    "get_patient",
-    "analyze"
-  ],
-  "verified": false,
-  "source": "https://github.com/derrickmo/m4"
-}

package/mcp-configs/academic-db/medical-mcp.json

@@ -1,21 +0,0 @@
-{
-  "id": "medical-mcp",
-  "name": "Medical MCP",
-  "description": "Medical information from FDA, WHO, PubMed drug databases",
-  "category": "academic-db",
-  "install": {
-    "runtime": "node",
-    "package": "medical-mcp",
-    "command": "npm install -g medical-mcp"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "search_drugs",
-    "get_interactions",
-    "search_conditions"
-  ],
-  "verified": false,
-  "source": "https://github.com/Cicatriiz/medical-mcp"
-}

package/mcp-configs/academic-db/nexonco-mcp.json

@@ -1,20 +0,0 @@
-{
-  "id": "nexonco-mcp",
-  "name": "NexOnco MCP",
-  "description": "Clinical evidence data for precision medicine and oncology",
-  "category": "academic-db",
-  "install": {
-    "runtime": "python",
-    "package": "nexonco-mcp",
-    "command": "pip install nexonco-mcp"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "search_evidence",
-    "get_treatment"
-  ],
-  "verified": false,
-  "source": "https://github.com/nicosantos-mcp/nexonco-mcp"
-}

package/mcp-configs/academic-db/omop-mcp.json

@@ -1,20 +0,0 @@
-{
-  "id": "omop-mcp",
-  "name": "OMOP Concept MCP",
-  "description": "Map clinical terminology to OMOP concepts for healthcare data",
-  "category": "academic-db",
-  "install": {
-    "runtime": "python",
-    "package": "omop-mcp",
-    "command": "pip install omop-mcp"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "search_concepts",
-    "map_terms"
-  ],
-  "verified": false,
-  "source": "https://github.com/nicosantos-mcp/omop_mcp"
-}

package/mcp-configs/academic-db/onekgpd-mcp.json

@@ -1,20 +0,0 @@
-{
-  "id": "onekgpd-mcp",
-  "name": "1000 Genomes MCP",
-  "description": "Real-time access to 1000 Genomes Project dataset",
-  "category": "academic-db",
-  "install": {
-    "runtime": "python",
-    "package": "onekgpd-mcp",
-    "command": "pip install onekgpd-mcp"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "search_variants",
-    "get_population"
-  ],
-  "verified": false,
-  "source": "https://github.com/nicosantos-mcp/onekgpd-mcp"
-}

package/mcp-configs/academic-db/openedu-mcp.json

@@ -1,20 +0,0 @@
-{
-  "id": "openedu-mcp",
-  "name": "OpenEdu MCP",
-  "description": "Educational resources from OpenLibrary, Wikipedia, arXiv",
-  "category": "academic-db",
-  "install": {
-    "runtime": "python",
-    "package": "openedu-mcp",
-    "command": "pip install openedu-mcp"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "search",
-    "get_resource"
-  ],
-  "verified": false,
-  "source": "https://github.com/jjohare/openedu-mcp"
-}

package/mcp-configs/academic-db/opengenes-mcp.json

@@ -1,20 +0,0 @@
-{
-  "id": "opengenes-mcp",
-  "name": "OpenGenes MCP",
-  "description": "Aging and longevity research gene database",
-  "category": "academic-db",
-  "install": {
-    "runtime": "python",
-    "package": "opengenes-mcp",
-    "command": "pip install opengenes-mcp"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "search_genes",
-    "get_gene_info"
-  ],
-  "verified": false,
-  "source": "https://github.com/nicosantos-mcp/opengenes-mcp"
-}

package/mcp-configs/academic-db/openstax-mcp.json

@@ -1,21 +0,0 @@
-{
-  "id": "openstax-mcp",
-  "name": "OpenStax Textbooks MCP",
-  "description": "OpenStax textbooks with semantic search and practice problems",
-  "category": "academic-db",
-  "install": {
-    "runtime": "python",
-    "package": "openstax-mcp-server",
-    "command": "pip install openstax-mcp-server"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "search",
-    "get_chapter",
-    "generate_problems"
-  ],
-  "verified": false,
-  "source": "https://github.com/jjohare/openstax-mcp-server"
-}

package/mcp-configs/academic-db/openstreetmap-mcp.json

@@ -1,21 +0,0 @@
-{
-  "id": "openstreetmap-mcp",
-  "name": "OpenStreetMap MCP",
-  "description": "OpenStreetMap location services and geospatial data",
-  "category": "academic-db",
-  "install": {
-    "runtime": "node",
-    "package": "open-streetmap-mcp",
-    "command": "npm install -g open-streetmap-mcp"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "search",
-    "geocode",
-    "get_map"
-  ],
-  "verified": false,
-  "source": "https://github.com/jjohare/open-streetmap-mcp"
-}

package/mcp-configs/academic-db/opentargets-mcp.json

@@ -1,21 +0,0 @@
-{
-  "id": "opentargets-mcp",
-  "name": "Open Targets MCP",
-  "description": "Open Targets Platform GraphQL for drug target discovery",
-  "category": "academic-db",
-  "install": {
-    "runtime": "python",
-    "package": "opentargets-mcp",
-    "command": "pip install opentargets-mcp"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "search_targets",
-    "get_associations",
-    "get_drugs"
-  ],
-  "verified": false,
-  "source": "https://github.com/nicosantos-mcp/opentargets-mcp"
-}

package/mcp-configs/academic-db/pdb-mcp.json

@@ -1,21 +0,0 @@
-{
-  "id": "pdb-mcp",
-  "name": "Protein Data Bank MCP",
-  "description": "PDB worldwide 3D protein structure repository",
-  "category": "academic-db",
-  "install": {
-    "runtime": "node",
-    "package": "pdb-mcp-server",
-    "command": "npm install -g pdb-mcp-server"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "search",
-    "get_structure",
-    "get_sequence"
-  ],
-  "verified": false,
-  "source": "https://github.com/ac3xx/PDB-MCP-Server"
-}

package/mcp-configs/academic-db/smithsonian-mcp.json

@@ -1,20 +0,0 @@
-{
-  "id": "smithsonian-mcp",
-  "name": "Smithsonian Open Access MCP",
-  "description": "Smithsonian Institution Open Access museum collections",
-  "category": "academic-db",
-  "install": {
-    "runtime": "node",
-    "package": "smithsonian-mcp",
-    "command": "npm install -g smithsonian-mcp"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "search",
-    "get_item"
-  ],
-  "verified": false,
-  "source": "https://github.com/jjohare/smithsonian-mcp"
-}