@wentorai/research-plugins 1.0.0

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  1. package/LICENSE +21 -0
  2. package/README.md +204 -0
  3. package/curated/analysis/README.md +64 -0
  4. package/curated/domains/README.md +104 -0
  5. package/curated/literature/README.md +53 -0
  6. package/curated/research/README.md +62 -0
  7. package/curated/tools/README.md +87 -0
  8. package/curated/writing/README.md +61 -0
  9. package/index.ts +39 -0
  10. package/mcp-configs/academic-db/ChatSpatial.json +17 -0
  11. package/mcp-configs/academic-db/academia-mcp.json +17 -0
  12. package/mcp-configs/academic-db/academic-paper-explorer.json +17 -0
  13. package/mcp-configs/academic-db/academic-search-mcp-server.json +17 -0
  14. package/mcp-configs/academic-db/agentinterviews-mcp.json +17 -0
  15. package/mcp-configs/academic-db/all-in-mcp.json +17 -0
  16. package/mcp-configs/academic-db/apple-health-mcp.json +17 -0
  17. package/mcp-configs/academic-db/arxiv-latex-mcp.json +17 -0
  18. package/mcp-configs/academic-db/arxiv-mcp-server.json +17 -0
  19. package/mcp-configs/academic-db/bgpt-mcp.json +17 -0
  20. package/mcp-configs/academic-db/biomcp.json +17 -0
  21. package/mcp-configs/academic-db/biothings-mcp.json +17 -0
  22. package/mcp-configs/academic-db/catalysishub-mcp-server.json +17 -0
  23. package/mcp-configs/academic-db/clinicaltrialsgov-mcp-server.json +17 -0
  24. package/mcp-configs/academic-db/deep-research-mcp.json +17 -0
  25. package/mcp-configs/academic-db/dicom-mcp.json +17 -0
  26. package/mcp-configs/academic-db/enrichr-mcp-server.json +17 -0
  27. package/mcp-configs/academic-db/fec-mcp-server.json +17 -0
  28. package/mcp-configs/academic-db/fhir-mcp-server-themomentum.json +17 -0
  29. package/mcp-configs/academic-db/fhir-mcp.json +19 -0
  30. package/mcp-configs/academic-db/gget-mcp.json +17 -0
  31. package/mcp-configs/academic-db/google-researcher-mcp.json +17 -0
  32. package/mcp-configs/academic-db/idea-reality-mcp.json +17 -0
  33. package/mcp-configs/academic-db/legiscan-mcp.json +19 -0
  34. package/mcp-configs/academic-db/lex.json +17 -0
  35. package/mcp-configs/ai-platform/Adaptive-Graph-of-Thoughts-MCP-server.json +17 -0
  36. package/mcp-configs/ai-platform/ai-counsel.json +17 -0
  37. package/mcp-configs/ai-platform/atlas-mcp-server.json +17 -0
  38. package/mcp-configs/ai-platform/counsel-mcp.json +17 -0
  39. package/mcp-configs/ai-platform/cross-llm-mcp.json +17 -0
  40. package/mcp-configs/ai-platform/gptr-mcp.json +17 -0
  41. package/mcp-configs/browser/decipher-research-agent.json +17 -0
  42. package/mcp-configs/browser/deep-research.json +17 -0
  43. package/mcp-configs/browser/everything-claude-code.json +17 -0
  44. package/mcp-configs/browser/gpt-researcher.json +17 -0
  45. package/mcp-configs/browser/heurist-agent-framework.json +17 -0
  46. package/mcp-configs/data-platform/4everland-hosting-mcp.json +17 -0
  47. package/mcp-configs/data-platform/context-keeper.json +17 -0
  48. package/mcp-configs/data-platform/context7.json +19 -0
  49. package/mcp-configs/data-platform/contextstream-mcp.json +17 -0
  50. package/mcp-configs/data-platform/email-mcp.json +17 -0
  51. package/mcp-configs/note-knowledge/ApeRAG.json +17 -0
  52. package/mcp-configs/note-knowledge/In-Memoria.json +17 -0
  53. package/mcp-configs/note-knowledge/agent-memory.json +17 -0
  54. package/mcp-configs/note-knowledge/aimemo.json +17 -0
  55. package/mcp-configs/note-knowledge/biel-mcp.json +19 -0
  56. package/mcp-configs/note-knowledge/cognee.json +17 -0
  57. package/mcp-configs/note-knowledge/context-awesome.json +17 -0
  58. package/mcp-configs/note-knowledge/context-mcp.json +17 -0
  59. package/mcp-configs/note-knowledge/conversation-handoff-mcp.json +17 -0
  60. package/mcp-configs/note-knowledge/cortex.json +17 -0
  61. package/mcp-configs/note-knowledge/devrag.json +17 -0
  62. package/mcp-configs/note-knowledge/easy-obsidian-mcp.json +17 -0
  63. package/mcp-configs/note-knowledge/engram.json +17 -0
  64. package/mcp-configs/note-knowledge/gnosis-mcp.json +17 -0
  65. package/mcp-configs/note-knowledge/graphlit-mcp-server.json +19 -0
  66. package/mcp-configs/reference-mgr/arxiv-cli.json +17 -0
  67. package/mcp-configs/reference-mgr/arxiv-search-mcp.json +17 -0
  68. package/mcp-configs/reference-mgr/chiken.json +17 -0
  69. package/mcp-configs/reference-mgr/claude-scholar.json +17 -0
  70. package/mcp-configs/reference-mgr/devonthink-mcp.json +17 -0
  71. package/mcp-configs/registry.json +447 -0
  72. package/openclaw.plugin.json +21 -0
  73. package/package.json +61 -0
  74. package/skills/analysis/dataviz/color-accessibility-guide/SKILL.md +230 -0
  75. package/skills/analysis/dataviz/geospatial-viz-guide/SKILL.md +218 -0
  76. package/skills/analysis/dataviz/interactive-viz-guide/SKILL.md +287 -0
  77. package/skills/analysis/dataviz/network-visualization-guide/SKILL.md +195 -0
  78. package/skills/analysis/dataviz/publication-figures-guide/SKILL.md +238 -0
  79. package/skills/analysis/dataviz/python-dataviz-guide/SKILL.md +195 -0
  80. package/skills/analysis/econometrics/causal-inference-guide/SKILL.md +197 -0
  81. package/skills/analysis/econometrics/iv-regression-guide/SKILL.md +198 -0
  82. package/skills/analysis/econometrics/panel-data-guide/SKILL.md +274 -0
  83. package/skills/analysis/econometrics/robustness-checks/SKILL.md +250 -0
  84. package/skills/analysis/econometrics/stata-regression/SKILL.md +117 -0
  85. package/skills/analysis/econometrics/time-series-guide/SKILL.md +235 -0
  86. package/skills/analysis/statistics/bayesian-statistics-guide/SKILL.md +221 -0
  87. package/skills/analysis/statistics/hypothesis-testing-guide/SKILL.md +210 -0
  88. package/skills/analysis/statistics/meta-analysis-guide/SKILL.md +206 -0
  89. package/skills/analysis/statistics/nonparametric-tests-guide/SKILL.md +221 -0
  90. package/skills/analysis/statistics/power-analysis-guide/SKILL.md +240 -0
  91. package/skills/analysis/statistics/sem-guide/SKILL.md +231 -0
  92. package/skills/analysis/statistics/survival-analysis-guide/SKILL.md +195 -0
  93. package/skills/analysis/wrangling/missing-data-handling/SKILL.md +224 -0
  94. package/skills/analysis/wrangling/pandas-data-wrangling/SKILL.md +242 -0
  95. package/skills/analysis/wrangling/questionnaire-design-guide/SKILL.md +234 -0
  96. package/skills/analysis/wrangling/text-mining-guide/SKILL.md +225 -0
  97. package/skills/domains/ai-ml/computer-vision-guide/SKILL.md +213 -0
  98. package/skills/domains/ai-ml/deep-learning-papers-guide/SKILL.md +200 -0
  99. package/skills/domains/ai-ml/llm-evaluation-guide/SKILL.md +194 -0
  100. package/skills/domains/ai-ml/prompt-engineering-research/SKILL.md +233 -0
  101. package/skills/domains/ai-ml/reinforcement-learning-guide/SKILL.md +254 -0
  102. package/skills/domains/ai-ml/transformer-architecture-guide/SKILL.md +233 -0
  103. package/skills/domains/biomedical/clinical-research-guide/SKILL.md +232 -0
  104. package/skills/domains/biomedical/clinicaltrials-api/SKILL.md +177 -0
  105. package/skills/domains/biomedical/epidemiology-guide/SKILL.md +200 -0
  106. package/skills/domains/biomedical/genomics-analysis-guide/SKILL.md +270 -0
  107. package/skills/domains/business/market-analysis-guide/SKILL.md +112 -0
  108. package/skills/domains/business/strategic-management-guide/SKILL.md +154 -0
  109. package/skills/domains/chemistry/computational-chemistry-guide/SKILL.md +266 -0
  110. package/skills/domains/chemistry/retrosynthesis-guide/SKILL.md +215 -0
  111. package/skills/domains/cs/algorithms-complexity-guide/SKILL.md +194 -0
  112. package/skills/domains/cs/dblp-api/SKILL.md +129 -0
  113. package/skills/domains/cs/software-engineering-research/SKILL.md +218 -0
  114. package/skills/domains/ecology/biodiversity-data-guide/SKILL.md +296 -0
  115. package/skills/domains/ecology/conservation-biology-guide/SKILL.md +198 -0
  116. package/skills/domains/ecology/gbif-api/SKILL.md +158 -0
  117. package/skills/domains/ecology/inaturalist-api/SKILL.md +173 -0
  118. package/skills/domains/economics/behavioral-economics-guide/SKILL.md +239 -0
  119. package/skills/domains/economics/development-economics-guide/SKILL.md +181 -0
  120. package/skills/domains/economics/fred-api/SKILL.md +189 -0
  121. package/skills/domains/education/curriculum-design-guide/SKILL.md +144 -0
  122. package/skills/domains/education/learning-science-guide/SKILL.md +150 -0
  123. package/skills/domains/finance/financial-data-analysis/SKILL.md +152 -0
  124. package/skills/domains/finance/quantitative-finance-guide/SKILL.md +151 -0
  125. package/skills/domains/geoscience/climate-science-guide/SKILL.md +158 -0
  126. package/skills/domains/geoscience/gis-remote-sensing-guide/SKILL.md +129 -0
  127. package/skills/domains/humanities/digital-humanities-guide/SKILL.md +181 -0
  128. package/skills/domains/humanities/philosophy-research-guide/SKILL.md +148 -0
  129. package/skills/domains/law/courtlistener-api/SKILL.md +213 -0
  130. package/skills/domains/law/legal-research-guide/SKILL.md +250 -0
  131. package/skills/domains/math/linear-algebra-applications/SKILL.md +227 -0
  132. package/skills/domains/math/numerical-methods-guide/SKILL.md +236 -0
  133. package/skills/domains/math/oeis-api/SKILL.md +158 -0
  134. package/skills/domains/pharma/clinical-pharmacology-guide/SKILL.md +165 -0
  135. package/skills/domains/pharma/drug-development-guide/SKILL.md +177 -0
  136. package/skills/domains/physics/computational-physics-guide/SKILL.md +300 -0
  137. package/skills/domains/physics/nasa-ads-api/SKILL.md +150 -0
  138. package/skills/domains/physics/quantum-computing-guide/SKILL.md +234 -0
  139. package/skills/domains/social-science/social-research-methods/SKILL.md +194 -0
  140. package/skills/domains/social-science/survey-research-guide/SKILL.md +182 -0
  141. package/skills/literature/discovery/citation-alert-guide/SKILL.md +154 -0
  142. package/skills/literature/discovery/conference-proceedings-guide/SKILL.md +142 -0
  143. package/skills/literature/discovery/literature-mapping-guide/SKILL.md +175 -0
  144. package/skills/literature/discovery/paper-tracking-guide/SKILL.md +211 -0
  145. package/skills/literature/discovery/rss-paper-feeds/SKILL.md +214 -0
  146. package/skills/literature/discovery/semantic-scholar-recs-guide/SKILL.md +164 -0
  147. package/skills/literature/fulltext/doaj-api/SKILL.md +120 -0
  148. package/skills/literature/fulltext/interlibrary-loan-guide/SKILL.md +163 -0
  149. package/skills/literature/fulltext/open-access-guide/SKILL.md +183 -0
  150. package/skills/literature/fulltext/pmc-oai-api/SKILL.md +184 -0
  151. package/skills/literature/fulltext/preprint-servers-guide/SKILL.md +128 -0
  152. package/skills/literature/fulltext/repository-harvesting-guide/SKILL.md +207 -0
  153. package/skills/literature/fulltext/unpaywall-api/SKILL.md +113 -0
  154. package/skills/literature/metadata/altmetrics-guide/SKILL.md +132 -0
  155. package/skills/literature/metadata/citation-network-guide/SKILL.md +236 -0
  156. package/skills/literature/metadata/crossref-api/SKILL.md +133 -0
  157. package/skills/literature/metadata/datacite-api/SKILL.md +126 -0
  158. package/skills/literature/metadata/doi-resolution-guide/SKILL.md +168 -0
  159. package/skills/literature/metadata/h-index-guide/SKILL.md +183 -0
  160. package/skills/literature/metadata/journal-metrics-guide/SKILL.md +188 -0
  161. package/skills/literature/metadata/opencitations-api/SKILL.md +128 -0
  162. package/skills/literature/metadata/orcid-api/SKILL.md +136 -0
  163. package/skills/literature/metadata/orcid-integration-guide/SKILL.md +178 -0
  164. package/skills/literature/search/arxiv-api/SKILL.md +95 -0
  165. package/skills/literature/search/biorxiv-api/SKILL.md +123 -0
  166. package/skills/literature/search/boolean-search-guide/SKILL.md +199 -0
  167. package/skills/literature/search/citation-chaining-guide/SKILL.md +148 -0
  168. package/skills/literature/search/database-comparison-guide/SKILL.md +100 -0
  169. package/skills/literature/search/europe-pmc-api/SKILL.md +120 -0
  170. package/skills/literature/search/google-scholar-guide/SKILL.md +182 -0
  171. package/skills/literature/search/mesh-terms-guide/SKILL.md +164 -0
  172. package/skills/literature/search/openalex-api/SKILL.md +134 -0
  173. package/skills/literature/search/pubmed-api/SKILL.md +130 -0
  174. package/skills/literature/search/scientify-literature-survey/SKILL.md +203 -0
  175. package/skills/literature/search/semantic-scholar-api/SKILL.md +134 -0
  176. package/skills/literature/search/systematic-search-strategy/SKILL.md +214 -0
  177. package/skills/research/automation/ai-scientist-guide/SKILL.md +228 -0
  178. package/skills/research/automation/data-collection-automation/SKILL.md +248 -0
  179. package/skills/research/automation/research-workflow-automation/SKILL.md +266 -0
  180. package/skills/research/deep-research/meta-synthesis-guide/SKILL.md +174 -0
  181. package/skills/research/deep-research/research-cog/SKILL.md +153 -0
  182. package/skills/research/deep-research/scoping-review-guide/SKILL.md +217 -0
  183. package/skills/research/deep-research/systematic-review-guide/SKILL.md +250 -0
  184. package/skills/research/funding/figshare-api/SKILL.md +163 -0
  185. package/skills/research/funding/grant-writing-guide/SKILL.md +233 -0
  186. package/skills/research/funding/nsf-grant-guide/SKILL.md +206 -0
  187. package/skills/research/funding/open-science-guide/SKILL.md +255 -0
  188. package/skills/research/funding/zenodo-api/SKILL.md +174 -0
  189. package/skills/research/methodology/action-research-guide/SKILL.md +201 -0
  190. package/skills/research/methodology/experimental-design-guide/SKILL.md +236 -0
  191. package/skills/research/methodology/grad-school-guide/SKILL.md +182 -0
  192. package/skills/research/methodology/grounded-theory-guide/SKILL.md +171 -0
  193. package/skills/research/methodology/mixed-methods-guide/SKILL.md +208 -0
  194. package/skills/research/methodology/qualitative-research-guide/SKILL.md +234 -0
  195. package/skills/research/methodology/scientify-idea-generation/SKILL.md +222 -0
  196. package/skills/research/paper-review/paper-reading-assistant/SKILL.md +266 -0
  197. package/skills/research/paper-review/peer-review-guide/SKILL.md +227 -0
  198. package/skills/research/paper-review/rebuttal-writing-guide/SKILL.md +185 -0
  199. package/skills/research/paper-review/scientify-write-review-paper/SKILL.md +209 -0
  200. package/skills/tools/code-exec/jupyter-notebook-guide/SKILL.md +178 -0
  201. package/skills/tools/code-exec/python-reproducibility-guide/SKILL.md +341 -0
  202. package/skills/tools/code-exec/r-reproducibility-guide/SKILL.md +236 -0
  203. package/skills/tools/code-exec/sandbox-execution-guide/SKILL.md +221 -0
  204. package/skills/tools/diagram/mermaid-diagram-guide/SKILL.md +269 -0
  205. package/skills/tools/diagram/plantuml-guide/SKILL.md +397 -0
  206. package/skills/tools/diagram/scientific-illustration-guide/SKILL.md +225 -0
  207. package/skills/tools/document/anystyle-api/SKILL.md +199 -0
  208. package/skills/tools/document/grobid-pdf-parsing/SKILL.md +294 -0
  209. package/skills/tools/document/markdown-academic-guide/SKILL.md +217 -0
  210. package/skills/tools/document/pdf-extraction-guide/SKILL.md +321 -0
  211. package/skills/tools/knowledge-graph/knowledge-graph-construction/SKILL.md +306 -0
  212. package/skills/tools/knowledge-graph/ontology-design-guide/SKILL.md +214 -0
  213. package/skills/tools/knowledge-graph/rag-methodology-guide/SKILL.md +325 -0
  214. package/skills/tools/ocr-translate/formula-recognition-guide/SKILL.md +367 -0
  215. package/skills/tools/ocr-translate/handwriting-recognition-guide/SKILL.md +211 -0
  216. package/skills/tools/ocr-translate/latex-ocr-guide/SKILL.md +204 -0
  217. package/skills/tools/ocr-translate/multilingual-research-guide/SKILL.md +234 -0
  218. package/skills/tools/scraping/academic-web-scraping/SKILL.md +326 -0
  219. package/skills/tools/scraping/api-data-collection-guide/SKILL.md +301 -0
  220. package/skills/tools/scraping/web-scraping-ethics-guide/SKILL.md +250 -0
  221. package/skills/writing/citation/bibtex-management-guide/SKILL.md +246 -0
  222. package/skills/writing/citation/citation-style-guide/SKILL.md +248 -0
  223. package/skills/writing/citation/reference-manager-comparison/SKILL.md +208 -0
  224. package/skills/writing/citation/zotero-api/SKILL.md +188 -0
  225. package/skills/writing/composition/abstract-writing-guide/SKILL.md +188 -0
  226. package/skills/writing/composition/discussion-writing-guide/SKILL.md +194 -0
  227. package/skills/writing/composition/introduction-writing-guide/SKILL.md +194 -0
  228. package/skills/writing/composition/literature-review-writing/SKILL.md +196 -0
  229. package/skills/writing/composition/methods-section-guide/SKILL.md +185 -0
  230. package/skills/writing/composition/response-to-reviewers/SKILL.md +215 -0
  231. package/skills/writing/composition/scientific-writing-guide/SKILL.md +152 -0
  232. package/skills/writing/latex/bibliography-management-guide/SKILL.md +206 -0
  233. package/skills/writing/latex/latex-drawing-guide/SKILL.md +234 -0
  234. package/skills/writing/latex/latex-ecosystem-guide/SKILL.md +240 -0
  235. package/skills/writing/latex/math-typesetting-guide/SKILL.md +231 -0
  236. package/skills/writing/latex/overleaf-collaboration-guide/SKILL.md +211 -0
  237. package/skills/writing/latex/tikz-diagrams-guide/SKILL.md +211 -0
  238. package/skills/writing/polish/academic-translation-guide/SKILL.md +175 -0
  239. package/skills/writing/polish/academic-writing-refiner/SKILL.md +143 -0
  240. package/skills/writing/polish/ai-writing-humanizer/SKILL.md +178 -0
  241. package/skills/writing/polish/grammar-checker-guide/SKILL.md +184 -0
  242. package/skills/writing/polish/plagiarism-detection-guide/SKILL.md +167 -0
  243. package/skills/writing/templates/beamer-presentation-guide/SKILL.md +263 -0
  244. package/skills/writing/templates/conference-paper-template/SKILL.md +219 -0
  245. package/skills/writing/templates/thesis-template-guide/SKILL.md +200 -0
  246. package/skills/writing/templates/thesis-writing-guide/SKILL.md +220 -0
  247. package/src/tools/arxiv.ts +131 -0
  248. package/src/tools/crossref.ts +112 -0
  249. package/src/tools/openalex.ts +174 -0
  250. package/src/tools/pubmed.ts +166 -0
  251. package/src/tools/semantic-scholar.ts +108 -0
  252. package/src/tools/unpaywall.ts +58 -0
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+ ---
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+ name: beamer-presentation-guide
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+ description: "Guide to creating academic presentations with LaTeX Beamer"
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+ metadata:
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+ openclaw:
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+ emoji: "slides"
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+ category: "writing"
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+ subcategory: "templates"
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+ keywords: ["Beamer presentation", "LaTeX slides", "conference paper template"]
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+ source: "wentor-research-plugins"
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+ ---
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+
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+ # Beamer Presentation Guide
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+
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+ Create professional academic presentations using LaTeX Beamer with themes, animations, and best practices for conference talks and research seminars.
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+
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+ ## Basic Beamer Document
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+
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+ ```latex
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+ \documentclass[aspectratio=169]{beamer} % 16:9 aspect ratio
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+ % Other options: aspectratio=43 (4:3, default), aspectratio=1610
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+
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+ \usetheme{Madrid} % Visual theme
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+ \usecolortheme{default} % Color scheme
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+ \usefonttheme{professionalfonts}
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+
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+ \usepackage{amsmath,amssymb}
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+ \usepackage{graphicx}
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+ \usepackage{booktabs} % Better tables
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+ \usepackage{hyperref}
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+
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+ \title[Short Title]{Full Title of Your Presentation}
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+ \subtitle{Conference Name 2025}
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+ \author[A. Smith]{Alice Smith\inst{1} \and Bob Jones\inst{2}}
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+ \institute[MIT, Stanford]{
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+ \inst{1}MIT \and \inst{2}Stanford University
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+ }
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+ \date{March 15, 2025}
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+
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+ \begin{document}
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+
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+ \begin{frame}
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+ \titlepage
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+ \end{frame}
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+
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+ \begin{frame}{Outline}
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+ \tableofcontents
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+ \end{frame}
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+
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+ \section{Introduction}
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+ \begin{frame}{Motivation}
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+ \begin{itemize}
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+ \item Research question and why it matters
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+ \item Key challenge in the field
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+ \item Our contribution in one sentence
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+ \end{itemize}
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+ \end{frame}
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+
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+ \end{document}
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+ ```
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+
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+ ## Popular Beamer Themes
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+
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+ | Theme | Style | Best For |
65
+ |-------|-------|----------|
66
+ | `Madrid` | Professional, structured headers | Conference talks |
67
+ | `Metropolis` (mtheme) | Modern, minimal, flat design | CS/tech conferences |
68
+ | `CambridgeUS` | Traditional academic | University seminars |
69
+ | `Singapore` | Clean navigation sidebar | Long presentations |
70
+ | `Bergen` | Compact, information-dense | Technical deep dives |
71
+ | `default` | Plain, no decoration | Maximum content area |
72
+
73
+ ### Installing Metropolis (Recommended)
74
+
75
+ ```latex
76
+ % Metropolis is a modern, clean theme widely used in CS/ML talks
77
+ \documentclass[aspectratio=169]{beamer}
78
+ \usetheme{metropolis}
79
+
80
+ % Customize colors
81
+ \definecolor{customPrimary}{RGB}{0, 83, 159} % University blue
82
+ \setbeamercolor{frametitle}{bg=customPrimary}
83
+ \setbeamercolor{progress bar}{fg=customPrimary}
84
+
85
+ % Optional: use Fira Sans font (matches Metropolis design)
86
+ % \usepackage[sfdefault]{FiraSans}
87
+ ```
88
+
89
+ ## Slide Types and Templates
90
+
91
+ ### Title + Content Slide
92
+
93
+ ```latex
94
+ \begin{frame}{Main Result}
95
+ \begin{theorem}[Our Main Theorem]
96
+ For any $\epsilon > 0$, Algorithm~\ref{alg:ours} achieves an
97
+ approximation ratio of $(1 - \epsilon)$ in time $O(n \log n / \epsilon)$.
98
+ \end{theorem}
99
+
100
+ \vspace{0.5em}
101
+ Key implications:
102
+ \begin{enumerate}
103
+ \item First polynomial-time approximation scheme for this problem
104
+ \item Improves over Smith et al. (2023) by a factor of $O(\log n)$
105
+ \item Extends to weighted variants
106
+ \end{enumerate}
107
+ \end{frame}
108
+ ```
109
+
110
+ ### Two-Column Slide
111
+
112
+ ```latex
113
+ \begin{frame}{Method Overview}
114
+ \begin{columns}[T]
115
+ \begin{column}{0.48\textwidth}
116
+ \textbf{Architecture}
117
+ \begin{itemize}
118
+ \item Encoder: 6-layer Transformer
119
+ \item Decoder: 6-layer Transformer
120
+ \item Hidden dim: 512
121
+ \item Attention heads: 8
122
+ \end{itemize}
123
+ \end{column}
124
+ \begin{column}{0.48\textwidth}
125
+ \textbf{Training}
126
+ \begin{itemize}
127
+ \item Optimizer: AdamW
128
+ \item Learning rate: $3 \times 10^{-4}$
129
+ \item Batch size: 256
130
+ \item Epochs: 100
131
+ \end{itemize}
132
+ \end{column}
133
+ \end{columns}
134
+ \end{frame}
135
+ ```
136
+
137
+ ### Figure Slide
138
+
139
+ ```latex
140
+ \begin{frame}{Experimental Results}
141
+ \begin{figure}
142
+ \centering
143
+ \includegraphics[width=0.85\textwidth]{figures/results-comparison.pdf}
144
+ \caption{Our method (blue) outperforms baselines across all benchmarks.}
145
+ \end{figure}
146
+ \end{frame>
147
+ ```
148
+
149
+ ### Table Slide
150
+
151
+ ```latex
152
+ \begin{frame}{Comparison with State of the Art}
153
+ \centering
154
+ \small
155
+ \begin{tabular}{lcccc}
156
+ \toprule
157
+ Method & Accuracy & F1 & Params & Speed \\
158
+ \midrule
159
+ Baseline A & 85.2 & 83.1 & 110M & 1.0x \\
160
+ Baseline B & 87.5 & 85.8 & 340M & 0.3x \\
161
+ \textbf{Ours} & \textbf{89.1} & \textbf{87.4} & 125M & 0.9x \\
162
+ \bottomrule
163
+ \end{tabular}
164
+ \end{frame}
165
+ ```
166
+
167
+ ## Animations and Overlays
168
+
169
+ ### Progressive Reveal
170
+
171
+ ```latex
172
+ \begin{frame}{Key Contributions}
173
+ \begin{itemize}
174
+ \item<1-> First contribution: novel problem formulation
175
+ \item<2-> Second contribution: efficient algorithm
176
+ \item<3-> Third contribution: theoretical guarantees
177
+ \item<4-> Fourth contribution: extensive experiments
178
+ \end{itemize}
179
+
180
+ \only<4>{
181
+ \vspace{1em}
182
+ \alert{All code and data are publicly available.}
183
+ }
184
+ \end{frame}
185
+ ```
186
+
187
+ ### Highlighting
188
+
189
+ ```latex
190
+ \begin{frame}{Pipeline}
191
+ Step 1: Data collection
192
+ \begin{itemize}
193
+ \item \alert<2>{Crawl 10M web pages}
194
+ \item \alert<3>{Filter and deduplicate}
195
+ \item \alert<4>{Annotate with human labels}
196
+ \end{itemize}
197
+
198
+ \uncover<5->{
199
+ \begin{block}{Result}
200
+ Final dataset: 2.3M high-quality labeled examples.
201
+ \end{block}
202
+ }
203
+ \end{frame}
204
+ ```
205
+
206
+ ## Code Listings in Beamer
207
+
208
+ ```latex
209
+ \usepackage{listings}
210
+ \lstset{
211
+ basicstyle=\ttfamily\scriptsize,
212
+ keywordstyle=\color{blue}\bfseries,
213
+ commentstyle=\color{gray},
214
+ stringstyle=\color{red},
215
+ breaklines=true,
216
+ frame=single,
217
+ backgroundcolor=\color{gray!10}
218
+ }
219
+
220
+ \begin{frame}[fragile]{Implementation} % [fragile] required for listings
221
+ \begin{lstlisting}[language=Python]
222
+ import torch
223
+ import torch.nn as nn
224
+
225
+ class TransformerBlock(nn.Module):
226
+ def __init__(self, d_model, n_heads):
227
+ super().__init__()
228
+ self.attn = nn.MultiheadAttention(d_model, n_heads)
229
+ self.norm = nn.LayerNorm(d_model)
230
+
231
+ def forward(self, x):
232
+ return self.norm(x + self.attn(x, x, x)[0])
233
+ \end{lstlisting}
234
+ \end{frame}
235
+ ```
236
+
237
+ ## Presentation Tips for Academic Talks
238
+
239
+ ### Content Planning
240
+
241
+ | Talk Length | Slides | Content |
242
+ |------------|--------|---------|
243
+ | 5 min (lightning) | 5-7 | Problem, method, key result |
244
+ | 15 min (conference) | 12-18 | + motivation, related work brief, 2-3 results |
245
+ | 30 min (seminar) | 20-30 | + background, methods detail, analysis |
246
+ | 60 min (colloquium) | 35-50 | + extensive background, all results, future work |
247
+
248
+ ### Design Principles
249
+
250
+ - **One idea per slide**: If you need to explain two things, use two slides
251
+ - **Minimize text**: Use bullet points (max 5-6 per slide), not paragraphs
252
+ - **Large fonts**: Body text at least 20pt; never below 16pt
253
+ - **High-contrast figures**: Ensure readability on projectors (avoid light colors on white)
254
+ - **Consistent style**: Same fonts, colors, and layout throughout
255
+ - **Backup slides**: Put extra details, proofs, and additional results after `\appendix` for Q&A
256
+
257
+ ```latex
258
+ % Backup slides (not counted in slide numbers)
259
+ \appendix
260
+ \begin{frame}{Proof of Theorem 1}
261
+ ...
262
+ \end{frame}
263
+ ```
@@ -0,0 +1,219 @@
1
+ ---
2
+ name: conference-paper-template
3
+ description: "Templates and formatting guides for major academic conference submissions"
4
+ metadata:
5
+ openclaw:
6
+ emoji: "page_facing_up"
7
+ category: "writing"
8
+ subcategory: "templates"
9
+ keywords: ["conference paper template", "proceedings format", "camera-ready", "journal formatting requirements", "LaTeX template"]
10
+ source: "wentor"
11
+ ---
12
+
13
+ # Conference Paper Template
14
+
15
+ A skill providing templates, formatting guidelines, and submission checklists for major academic conferences. Covers LaTeX and Word template setup, common formatting requirements, and camera-ready preparation.
16
+
17
+ ## Common Conference Formats
18
+
19
+ ### Format Specifications by Venue
20
+
21
+ | Conference/Style | Page Limit | Columns | Font | Margins | Template |
22
+ |-----------------|-----------|---------|------|---------|----------|
23
+ | ACL/EMNLP (ARR) | 8 + refs | 2 | Times 11pt | 1in all | acl.sty |
24
+ | NeurIPS | 8 + refs | 2 | Times 10pt | 1in top/bottom, 0.75in sides | neurips.sty |
25
+ | ICML | 8 + refs | 2 | Times 10pt | 1in all | icml.sty |
26
+ | AAAI | 7 + 1 refs | 2 | Times 10pt | 0.75in all | aaai.sty |
27
+ | IEEE (CVPR, etc.) | 8 | 2 | Times 10pt | 1in top, 0.75in sides | IEEEtran.cls |
28
+ | ACM (SIGCHI, etc.) | varies | 1 or 2 | Linux Libertine | varies | acmart.cls |
29
+ | Springer LNCS | 12-16 | 1 | Computer Modern 10pt | varies | llncs.cls |
30
+
31
+ ### LaTeX Template: General Conference Paper
32
+
33
+ ```latex
34
+ \documentclass[11pt,a4paper]{article}
35
+ \usepackage[utf8]{inputenc}
36
+ \usepackage[T1]{fontenc}
37
+ \usepackage{times}
38
+ \usepackage{amsmath,amssymb}
39
+ \usepackage{graphicx}
40
+ \usepackage{booktabs}
41
+ \usepackage{hyperref}
42
+ \usepackage{natbib}
43
+ \usepackage[margin=1in]{geometry}
44
+
45
+ % Conference-specific: anonymization for review
46
+ \usepackage{xspace}
47
+ \newcommand{\etal}{\textit{et al.}\xspace}
48
+
49
+ \title{Your Paper Title: Subtitle with Key Contribution}
50
+
51
+ % For review submission (anonymous)
52
+ \author{Anonymous Authors}
53
+ % For camera-ready (de-anonymized)
54
+ % \author{First Author\textsuperscript{1} \and
55
+ % Second Author\textsuperscript{2} \\
56
+ % \textsuperscript{1}University A, \textsuperscript{2}University B \\
57
+ % \texttt{\{first,second\}@email.edu}}
58
+
59
+ \begin{document}
60
+ \maketitle
61
+
62
+ \begin{abstract}
63
+ Your abstract here (typically 150-250 words).
64
+ State the problem, approach, key results, and significance.
65
+ \end{abstract}
66
+
67
+ \section{Introduction}
68
+ % Paragraph 1: Problem and motivation
69
+ % Paragraph 2: Limitations of existing approaches
70
+ % Paragraph 3: Your approach and contributions
71
+ % Paragraph 4: Paper organization (optional)
72
+
73
+ \section{Related Work}
74
+ % Organized by theme, not chronologically
75
+
76
+ \section{Method}
77
+ % Detailed enough to reproduce
78
+
79
+ \section{Experiments}
80
+ \subsection{Experimental Setup}
81
+ \subsection{Results}
82
+ \subsection{Analysis}
83
+
84
+ \section{Conclusion}
85
+
86
+ \bibliography{references}
87
+ \bibliographystyle{plainnat}
88
+
89
+ \end{document}
90
+ ```
91
+
92
+ ## Camera-Ready Preparation
93
+
94
+ ### Pre-Submission Checklist
95
+
96
+ ```python
97
+ def camera_ready_checklist(paper_info: dict) -> list[dict]:
98
+ """
99
+ Generate a camera-ready preparation checklist.
100
+
101
+ Args:
102
+ paper_info: Dict with 'venue', 'page_limit', 'has_appendix', etc.
103
+ """
104
+ checks = [
105
+ {
106
+ 'item': 'De-anonymization',
107
+ 'description': 'Author names, affiliations, and acknowledgments restored',
108
+ 'critical': True
109
+ },
110
+ {
111
+ 'item': 'Page limit compliance',
112
+ 'description': f"Paper is within {paper_info.get('page_limit', 8)} page limit",
113
+ 'critical': True
114
+ },
115
+ {
116
+ 'item': 'Copyright/license form',
117
+ 'description': 'Signed and uploaded to submission system',
118
+ 'critical': True
119
+ },
120
+ {
121
+ 'item': 'Figures at 300 DPI',
122
+ 'description': 'All figures are high resolution (300 DPI minimum for print)',
123
+ 'critical': True
124
+ },
125
+ {
126
+ 'item': 'Fonts embedded',
127
+ 'description': 'All fonts embedded in PDF (check with pdffonts)',
128
+ 'critical': True
129
+ },
130
+ {
131
+ 'item': 'References complete',
132
+ 'description': 'All references have venue, year, pages; no "to appear" remaining',
133
+ 'critical': True
134
+ },
135
+ {
136
+ 'item': 'Hyperlinks work',
137
+ 'description': 'All URLs and DOIs are valid and clickable',
138
+ 'critical': False
139
+ },
140
+ {
141
+ 'item': 'Supplementary materials',
142
+ 'description': 'Code, data, appendices uploaded separately if required',
143
+ 'critical': False
144
+ },
145
+ {
146
+ 'item': 'Metadata in PDF',
147
+ 'description': 'PDF title and author metadata set correctly',
148
+ 'critical': False
149
+ }
150
+ ]
151
+
152
+ return checks
153
+ ```
154
+
155
+ ### Fixing Common Formatting Issues
156
+
157
+ ```bash
158
+ # Check for font embedding issues
159
+ pdffonts paper.pdf
160
+
161
+ # Embed all fonts (if any are not embedded)
162
+ gs -dNOPAUSE -dBATCH -sDEVICE=pdfwrite \
163
+ -dPDFSETTINGS=/prepress \
164
+ -dEmbedAllFonts=true \
165
+ -dSubsetFonts=true \
166
+ -sOutputFile=paper_embedded.pdf \
167
+ paper.pdf
168
+
169
+ # Check page count
170
+ pdfinfo paper.pdf | grep Pages
171
+
172
+ # Verify PDF/A compliance (some venues require it)
173
+ verapdf paper.pdf
174
+ ```
175
+
176
+ ## Table and Figure Formatting
177
+
178
+ ### Publication-Quality Tables
179
+
180
+ ```latex
181
+ % Use booktabs for professional tables (never use vertical lines)
182
+ \begin{table}[t]
183
+ \centering
184
+ \caption{Comparison of methods on benchmark datasets.
185
+ Best results in \textbf{bold}, second best \underline{underlined}.}
186
+ \label{tab:results}
187
+ \begin{tabular}{lcccc}
188
+ \toprule
189
+ Method & Dataset A & Dataset B & Dataset C & Avg. \\
190
+ \midrule
191
+ Baseline & 78.2 & 72.1 & 81.3 & 77.2 \\
192
+ Previous SOTA & 82.4 & 76.8 & 84.1 & 81.1 \\
193
+ Ours (w/o X) & \underline{84.1} & \underline{78.2} & \underline{85.7} & \underline{82.7} \\
194
+ Ours (full) & \textbf{86.3} & \textbf{80.1} & \textbf{87.2} & \textbf{84.5} \\
195
+ \bottomrule
196
+ \end{tabular}
197
+ \end{table}
198
+ ```
199
+
200
+ ### Figure Placement
201
+
202
+ ```latex
203
+ % Figures should appear at top of page or on their own page
204
+ \begin{figure}[t]
205
+ \centering
206
+ \includegraphics[width=\columnwidth]{figures/architecture.pdf}
207
+ \caption{Overview of the proposed architecture. The encoder processes
208
+ input sequences while the decoder generates structured output.}
209
+ \label{fig:architecture}
210
+ \end{figure}
211
+ ```
212
+
213
+ ## Submission Tips
214
+
215
+ - Start formatting early -- do not leave it for the night before the deadline
216
+ - Use `latexdiff` to generate a diff PDF showing changes from previous versions
217
+ - For Word submissions, use the official template's styles (not manual formatting)
218
+ - Always check the supplementary material policy: some venues allow unlimited appendix pages, others count toward the page limit
219
+ - Keep a backup of the exact submitted version with a timestamp for your records
@@ -0,0 +1,200 @@
1
+ ---
2
+ name: thesis-template-guide
3
+ description: "Set up LaTeX templates for PhD and Master's thesis documents"
4
+ metadata:
5
+ openclaw:
6
+ emoji: "mortar_board"
7
+ category: "writing"
8
+ subcategory: "templates"
9
+ keywords: ["thesis template", "dissertation", "LaTeX thesis", "PhD writing", "graduate thesis", "document class"]
10
+ source: "wentor-research-plugins"
11
+ ---
12
+
13
+ # Thesis Template Guide
14
+
15
+ A skill for setting up and customizing LaTeX templates for PhD and Master's theses. Covers document class selection, front matter configuration, chapter organization, and strategies for managing a large multi-file LaTeX project over months or years of writing.
16
+
17
+ ## Document Class Selection
18
+
19
+ ### Common Thesis Classes
20
+
21
+ | Class | Description | Use Case |
22
+ |-------|------------|---------|
23
+ | `book` | Standard LaTeX class with chapters | Most flexible, requires manual formatting |
24
+ | `memoir` | Extended book class with many built-in features | Excellent default for custom templates |
25
+ | `report` | Simpler than book, supports chapters | Quick setup for shorter theses |
26
+ | University-specific | Custom class provided by your institution | Required by many universities |
27
+
28
+ ### Basic Thesis Structure
29
+
30
+ ```latex
31
+ \documentclass[12pt, a4paper, twoside, openright]{book}
32
+ \usepackage[utf8]{inputenc}
33
+ \usepackage[T1]{fontenc}
34
+ \usepackage[english]{babel}
35
+ \usepackage{geometry}
36
+ \geometry{margin=2.5cm, bindingoffset=1cm}
37
+
38
+ % Essential packages
39
+ \usepackage{graphicx}
40
+ \usepackage{amsmath, amssymb}
41
+ \usepackage{hyperref}
42
+ \usepackage[backend=biber, style=authoryear]{biblatex}
43
+ \addbibresource{references.bib}
44
+
45
+ \begin{document}
46
+
47
+ \frontmatter
48
+ \include{chapters/titlepage}
49
+ \include{chapters/abstract}
50
+ \include{chapters/acknowledgements}
51
+ \tableofcontents
52
+ \listoffigures
53
+ \listoftables
54
+
55
+ \mainmatter
56
+ \include{chapters/introduction}
57
+ \include{chapters/literature_review}
58
+ \include{chapters/methodology}
59
+ \include{chapters/results}
60
+ \include{chapters/discussion}
61
+ \include{chapters/conclusion}
62
+
63
+ \appendix
64
+ \include{chapters/appendix_a}
65
+
66
+ \backmatter
67
+ \printbibliography[heading=bibintoc]
68
+
69
+ \end{document}
70
+ ```
71
+
72
+ ## Project File Organization
73
+
74
+ ### Recommended Directory Structure
75
+
76
+ ```
77
+ thesis/
78
+ main.tex -- Master document (compile this)
79
+ references.bib -- Bibliography database
80
+ preamble.tex -- All package imports and settings
81
+ chapters/
82
+ titlepage.tex
83
+ abstract.tex
84
+ acknowledgements.tex
85
+ introduction.tex
86
+ literature_review.tex
87
+ methodology.tex
88
+ results.tex
89
+ discussion.tex
90
+ conclusion.tex
91
+ appendix_a.tex
92
+ figures/
93
+ ch1/ -- Figures organized by chapter
94
+ ch2/
95
+ ch3/
96
+ tables/
97
+ styles/
98
+ university.sty -- University-specific formatting
99
+ ```
100
+
101
+ ### Using a Preamble File
102
+
103
+ ```latex
104
+ % preamble.tex -- imported with \input{preamble} in main.tex
105
+ \usepackage{setspace}
106
+ \doublespacing % Most universities require double-spacing
107
+
108
+ \usepackage{fancyhdr}
109
+ \pagestyle{fancy}
110
+ \fancyhead[LE,RO]{\thepage}
111
+ \fancyhead[RE]{\leftmark}
112
+ \fancyhead[LO]{\rightmark}
113
+ \fancyfoot{}
114
+
115
+ \usepackage[font=small, labelfont=bf]{caption}
116
+ \usepackage{booktabs} % Professional tables
117
+ \usepackage{microtype} % Better typography
118
+
119
+ % Custom commands
120
+ \newcommand{\TODO}[1]{\textcolor{red}{\textbf{TODO: #1}}}
121
+ \newcommand{\ie}{i.e.,\xspace}
122
+ \newcommand{\eg}{e.g.,\xspace}
123
+ ```
124
+
125
+ ## Managing a Long Document
126
+
127
+ ### Compilation Strategies
128
+
129
+ ```python
130
+ def thesis_compilation_tips() -> dict:
131
+ """
132
+ Tips for efficiently compiling a multi-chapter thesis.
133
+ """
134
+ return {
135
+ "selective_compilation": {
136
+ "method": "\\includeonly{chapters/results}",
137
+ "benefit": "Compile only the chapter you are working on",
138
+ "note": "Page numbers and references stay correct"
139
+ },
140
+ "draft_mode": {
141
+ "method": "\\documentclass[draft]{book}",
142
+ "benefit": "Skips images, shows overfull boxes",
143
+ "note": "Much faster compilation during writing"
144
+ },
145
+ "latexmk": {
146
+ "command": "latexmk -pdf -pvc main.tex",
147
+ "benefit": "Auto-recompile on file save",
148
+ "note": "-pvc flag opens viewer with live updates"
149
+ },
150
+ "subfile_package": {
151
+ "method": "\\usepackage{subfiles}",
152
+ "benefit": "Each chapter compiles as standalone document",
153
+ "note": "Useful for co-authoring individual chapters"
154
+ }
155
+ }
156
+ ```
157
+
158
+ ### Version Control Best Practices
159
+
160
+ ```
161
+ 1. Use Git for your thesis from day one
162
+ 2. Commit after each writing session with descriptive messages
163
+ 3. Add to .gitignore:
164
+ *.aux *.bbl *.bcf *.blg *.fdb_latexmk *.fls
165
+ *.log *.out *.synctex.gz *.toc *.lof *.lot *.run.xml
166
+ 4. Keep generated PDFs out of version control (regenerate from source)
167
+ 5. Use branches for major revisions or advisor feedback rounds
168
+ 6. Tag milestones: v1-first-draft, v2-committee-review, v3-final
169
+ ```
170
+
171
+ ## Front Matter Essentials
172
+
173
+ ### Title Page Template
174
+
175
+ ```latex
176
+ % chapters/titlepage.tex
177
+ \begin{titlepage}
178
+ \centering
179
+ \vspace*{2cm}
180
+ {\LARGE\bfseries Your Thesis Title: A Study of Something Important\par}
181
+ \vspace{1.5cm}
182
+ {\Large Your Full Name\par}
183
+ \vspace{1cm}
184
+ {\large A thesis submitted in partial fulfillment of the requirements
185
+ for the degree of\par}
186
+ \vspace{0.5cm}
187
+ {\large\bfseries Doctor of Philosophy\par}
188
+ \vspace{0.5cm}
189
+ {\large Department of Your Department\par}
190
+ {\large Your University\par}
191
+ \vspace{1cm}
192
+ {\large Month Year\par}
193
+ \vfill
194
+ {\large Advisor: Prof.\ Advisor Name\par}
195
+ \end{titlepage}
196
+ ```
197
+
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+ ## Common Formatting Requirements
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+ Most universities specify margins, font size, spacing, page numbering (roman for front matter, arabic for body), and binding offset. Always obtain your institution's official formatting guidelines before starting. Many universities provide their own LaTeX class file or Word template -- use it as the base and customize minimally to avoid format rejection at submission time.