@wentorai/research-plugins 1.0.0

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  1. package/LICENSE +21 -0
  2. package/README.md +204 -0
  3. package/curated/analysis/README.md +64 -0
  4. package/curated/domains/README.md +104 -0
  5. package/curated/literature/README.md +53 -0
  6. package/curated/research/README.md +62 -0
  7. package/curated/tools/README.md +87 -0
  8. package/curated/writing/README.md +61 -0
  9. package/index.ts +39 -0
  10. package/mcp-configs/academic-db/ChatSpatial.json +17 -0
  11. package/mcp-configs/academic-db/academia-mcp.json +17 -0
  12. package/mcp-configs/academic-db/academic-paper-explorer.json +17 -0
  13. package/mcp-configs/academic-db/academic-search-mcp-server.json +17 -0
  14. package/mcp-configs/academic-db/agentinterviews-mcp.json +17 -0
  15. package/mcp-configs/academic-db/all-in-mcp.json +17 -0
  16. package/mcp-configs/academic-db/apple-health-mcp.json +17 -0
  17. package/mcp-configs/academic-db/arxiv-latex-mcp.json +17 -0
  18. package/mcp-configs/academic-db/arxiv-mcp-server.json +17 -0
  19. package/mcp-configs/academic-db/bgpt-mcp.json +17 -0
  20. package/mcp-configs/academic-db/biomcp.json +17 -0
  21. package/mcp-configs/academic-db/biothings-mcp.json +17 -0
  22. package/mcp-configs/academic-db/catalysishub-mcp-server.json +17 -0
  23. package/mcp-configs/academic-db/clinicaltrialsgov-mcp-server.json +17 -0
  24. package/mcp-configs/academic-db/deep-research-mcp.json +17 -0
  25. package/mcp-configs/academic-db/dicom-mcp.json +17 -0
  26. package/mcp-configs/academic-db/enrichr-mcp-server.json +17 -0
  27. package/mcp-configs/academic-db/fec-mcp-server.json +17 -0
  28. package/mcp-configs/academic-db/fhir-mcp-server-themomentum.json +17 -0
  29. package/mcp-configs/academic-db/fhir-mcp.json +19 -0
  30. package/mcp-configs/academic-db/gget-mcp.json +17 -0
  31. package/mcp-configs/academic-db/google-researcher-mcp.json +17 -0
  32. package/mcp-configs/academic-db/idea-reality-mcp.json +17 -0
  33. package/mcp-configs/academic-db/legiscan-mcp.json +19 -0
  34. package/mcp-configs/academic-db/lex.json +17 -0
  35. package/mcp-configs/ai-platform/Adaptive-Graph-of-Thoughts-MCP-server.json +17 -0
  36. package/mcp-configs/ai-platform/ai-counsel.json +17 -0
  37. package/mcp-configs/ai-platform/atlas-mcp-server.json +17 -0
  38. package/mcp-configs/ai-platform/counsel-mcp.json +17 -0
  39. package/mcp-configs/ai-platform/cross-llm-mcp.json +17 -0
  40. package/mcp-configs/ai-platform/gptr-mcp.json +17 -0
  41. package/mcp-configs/browser/decipher-research-agent.json +17 -0
  42. package/mcp-configs/browser/deep-research.json +17 -0
  43. package/mcp-configs/browser/everything-claude-code.json +17 -0
  44. package/mcp-configs/browser/gpt-researcher.json +17 -0
  45. package/mcp-configs/browser/heurist-agent-framework.json +17 -0
  46. package/mcp-configs/data-platform/4everland-hosting-mcp.json +17 -0
  47. package/mcp-configs/data-platform/context-keeper.json +17 -0
  48. package/mcp-configs/data-platform/context7.json +19 -0
  49. package/mcp-configs/data-platform/contextstream-mcp.json +17 -0
  50. package/mcp-configs/data-platform/email-mcp.json +17 -0
  51. package/mcp-configs/note-knowledge/ApeRAG.json +17 -0
  52. package/mcp-configs/note-knowledge/In-Memoria.json +17 -0
  53. package/mcp-configs/note-knowledge/agent-memory.json +17 -0
  54. package/mcp-configs/note-knowledge/aimemo.json +17 -0
  55. package/mcp-configs/note-knowledge/biel-mcp.json +19 -0
  56. package/mcp-configs/note-knowledge/cognee.json +17 -0
  57. package/mcp-configs/note-knowledge/context-awesome.json +17 -0
  58. package/mcp-configs/note-knowledge/context-mcp.json +17 -0
  59. package/mcp-configs/note-knowledge/conversation-handoff-mcp.json +17 -0
  60. package/mcp-configs/note-knowledge/cortex.json +17 -0
  61. package/mcp-configs/note-knowledge/devrag.json +17 -0
  62. package/mcp-configs/note-knowledge/easy-obsidian-mcp.json +17 -0
  63. package/mcp-configs/note-knowledge/engram.json +17 -0
  64. package/mcp-configs/note-knowledge/gnosis-mcp.json +17 -0
  65. package/mcp-configs/note-knowledge/graphlit-mcp-server.json +19 -0
  66. package/mcp-configs/reference-mgr/arxiv-cli.json +17 -0
  67. package/mcp-configs/reference-mgr/arxiv-search-mcp.json +17 -0
  68. package/mcp-configs/reference-mgr/chiken.json +17 -0
  69. package/mcp-configs/reference-mgr/claude-scholar.json +17 -0
  70. package/mcp-configs/reference-mgr/devonthink-mcp.json +17 -0
  71. package/mcp-configs/registry.json +447 -0
  72. package/openclaw.plugin.json +21 -0
  73. package/package.json +61 -0
  74. package/skills/analysis/dataviz/color-accessibility-guide/SKILL.md +230 -0
  75. package/skills/analysis/dataviz/geospatial-viz-guide/SKILL.md +218 -0
  76. package/skills/analysis/dataviz/interactive-viz-guide/SKILL.md +287 -0
  77. package/skills/analysis/dataviz/network-visualization-guide/SKILL.md +195 -0
  78. package/skills/analysis/dataviz/publication-figures-guide/SKILL.md +238 -0
  79. package/skills/analysis/dataviz/python-dataviz-guide/SKILL.md +195 -0
  80. package/skills/analysis/econometrics/causal-inference-guide/SKILL.md +197 -0
  81. package/skills/analysis/econometrics/iv-regression-guide/SKILL.md +198 -0
  82. package/skills/analysis/econometrics/panel-data-guide/SKILL.md +274 -0
  83. package/skills/analysis/econometrics/robustness-checks/SKILL.md +250 -0
  84. package/skills/analysis/econometrics/stata-regression/SKILL.md +117 -0
  85. package/skills/analysis/econometrics/time-series-guide/SKILL.md +235 -0
  86. package/skills/analysis/statistics/bayesian-statistics-guide/SKILL.md +221 -0
  87. package/skills/analysis/statistics/hypothesis-testing-guide/SKILL.md +210 -0
  88. package/skills/analysis/statistics/meta-analysis-guide/SKILL.md +206 -0
  89. package/skills/analysis/statistics/nonparametric-tests-guide/SKILL.md +221 -0
  90. package/skills/analysis/statistics/power-analysis-guide/SKILL.md +240 -0
  91. package/skills/analysis/statistics/sem-guide/SKILL.md +231 -0
  92. package/skills/analysis/statistics/survival-analysis-guide/SKILL.md +195 -0
  93. package/skills/analysis/wrangling/missing-data-handling/SKILL.md +224 -0
  94. package/skills/analysis/wrangling/pandas-data-wrangling/SKILL.md +242 -0
  95. package/skills/analysis/wrangling/questionnaire-design-guide/SKILL.md +234 -0
  96. package/skills/analysis/wrangling/text-mining-guide/SKILL.md +225 -0
  97. package/skills/domains/ai-ml/computer-vision-guide/SKILL.md +213 -0
  98. package/skills/domains/ai-ml/deep-learning-papers-guide/SKILL.md +200 -0
  99. package/skills/domains/ai-ml/llm-evaluation-guide/SKILL.md +194 -0
  100. package/skills/domains/ai-ml/prompt-engineering-research/SKILL.md +233 -0
  101. package/skills/domains/ai-ml/reinforcement-learning-guide/SKILL.md +254 -0
  102. package/skills/domains/ai-ml/transformer-architecture-guide/SKILL.md +233 -0
  103. package/skills/domains/biomedical/clinical-research-guide/SKILL.md +232 -0
  104. package/skills/domains/biomedical/clinicaltrials-api/SKILL.md +177 -0
  105. package/skills/domains/biomedical/epidemiology-guide/SKILL.md +200 -0
  106. package/skills/domains/biomedical/genomics-analysis-guide/SKILL.md +270 -0
  107. package/skills/domains/business/market-analysis-guide/SKILL.md +112 -0
  108. package/skills/domains/business/strategic-management-guide/SKILL.md +154 -0
  109. package/skills/domains/chemistry/computational-chemistry-guide/SKILL.md +266 -0
  110. package/skills/domains/chemistry/retrosynthesis-guide/SKILL.md +215 -0
  111. package/skills/domains/cs/algorithms-complexity-guide/SKILL.md +194 -0
  112. package/skills/domains/cs/dblp-api/SKILL.md +129 -0
  113. package/skills/domains/cs/software-engineering-research/SKILL.md +218 -0
  114. package/skills/domains/ecology/biodiversity-data-guide/SKILL.md +296 -0
  115. package/skills/domains/ecology/conservation-biology-guide/SKILL.md +198 -0
  116. package/skills/domains/ecology/gbif-api/SKILL.md +158 -0
  117. package/skills/domains/ecology/inaturalist-api/SKILL.md +173 -0
  118. package/skills/domains/economics/behavioral-economics-guide/SKILL.md +239 -0
  119. package/skills/domains/economics/development-economics-guide/SKILL.md +181 -0
  120. package/skills/domains/economics/fred-api/SKILL.md +189 -0
  121. package/skills/domains/education/curriculum-design-guide/SKILL.md +144 -0
  122. package/skills/domains/education/learning-science-guide/SKILL.md +150 -0
  123. package/skills/domains/finance/financial-data-analysis/SKILL.md +152 -0
  124. package/skills/domains/finance/quantitative-finance-guide/SKILL.md +151 -0
  125. package/skills/domains/geoscience/climate-science-guide/SKILL.md +158 -0
  126. package/skills/domains/geoscience/gis-remote-sensing-guide/SKILL.md +129 -0
  127. package/skills/domains/humanities/digital-humanities-guide/SKILL.md +181 -0
  128. package/skills/domains/humanities/philosophy-research-guide/SKILL.md +148 -0
  129. package/skills/domains/law/courtlistener-api/SKILL.md +213 -0
  130. package/skills/domains/law/legal-research-guide/SKILL.md +250 -0
  131. package/skills/domains/math/linear-algebra-applications/SKILL.md +227 -0
  132. package/skills/domains/math/numerical-methods-guide/SKILL.md +236 -0
  133. package/skills/domains/math/oeis-api/SKILL.md +158 -0
  134. package/skills/domains/pharma/clinical-pharmacology-guide/SKILL.md +165 -0
  135. package/skills/domains/pharma/drug-development-guide/SKILL.md +177 -0
  136. package/skills/domains/physics/computational-physics-guide/SKILL.md +300 -0
  137. package/skills/domains/physics/nasa-ads-api/SKILL.md +150 -0
  138. package/skills/domains/physics/quantum-computing-guide/SKILL.md +234 -0
  139. package/skills/domains/social-science/social-research-methods/SKILL.md +194 -0
  140. package/skills/domains/social-science/survey-research-guide/SKILL.md +182 -0
  141. package/skills/literature/discovery/citation-alert-guide/SKILL.md +154 -0
  142. package/skills/literature/discovery/conference-proceedings-guide/SKILL.md +142 -0
  143. package/skills/literature/discovery/literature-mapping-guide/SKILL.md +175 -0
  144. package/skills/literature/discovery/paper-tracking-guide/SKILL.md +211 -0
  145. package/skills/literature/discovery/rss-paper-feeds/SKILL.md +214 -0
  146. package/skills/literature/discovery/semantic-scholar-recs-guide/SKILL.md +164 -0
  147. package/skills/literature/fulltext/doaj-api/SKILL.md +120 -0
  148. package/skills/literature/fulltext/interlibrary-loan-guide/SKILL.md +163 -0
  149. package/skills/literature/fulltext/open-access-guide/SKILL.md +183 -0
  150. package/skills/literature/fulltext/pmc-oai-api/SKILL.md +184 -0
  151. package/skills/literature/fulltext/preprint-servers-guide/SKILL.md +128 -0
  152. package/skills/literature/fulltext/repository-harvesting-guide/SKILL.md +207 -0
  153. package/skills/literature/fulltext/unpaywall-api/SKILL.md +113 -0
  154. package/skills/literature/metadata/altmetrics-guide/SKILL.md +132 -0
  155. package/skills/literature/metadata/citation-network-guide/SKILL.md +236 -0
  156. package/skills/literature/metadata/crossref-api/SKILL.md +133 -0
  157. package/skills/literature/metadata/datacite-api/SKILL.md +126 -0
  158. package/skills/literature/metadata/doi-resolution-guide/SKILL.md +168 -0
  159. package/skills/literature/metadata/h-index-guide/SKILL.md +183 -0
  160. package/skills/literature/metadata/journal-metrics-guide/SKILL.md +188 -0
  161. package/skills/literature/metadata/opencitations-api/SKILL.md +128 -0
  162. package/skills/literature/metadata/orcid-api/SKILL.md +136 -0
  163. package/skills/literature/metadata/orcid-integration-guide/SKILL.md +178 -0
  164. package/skills/literature/search/arxiv-api/SKILL.md +95 -0
  165. package/skills/literature/search/biorxiv-api/SKILL.md +123 -0
  166. package/skills/literature/search/boolean-search-guide/SKILL.md +199 -0
  167. package/skills/literature/search/citation-chaining-guide/SKILL.md +148 -0
  168. package/skills/literature/search/database-comparison-guide/SKILL.md +100 -0
  169. package/skills/literature/search/europe-pmc-api/SKILL.md +120 -0
  170. package/skills/literature/search/google-scholar-guide/SKILL.md +182 -0
  171. package/skills/literature/search/mesh-terms-guide/SKILL.md +164 -0
  172. package/skills/literature/search/openalex-api/SKILL.md +134 -0
  173. package/skills/literature/search/pubmed-api/SKILL.md +130 -0
  174. package/skills/literature/search/scientify-literature-survey/SKILL.md +203 -0
  175. package/skills/literature/search/semantic-scholar-api/SKILL.md +134 -0
  176. package/skills/literature/search/systematic-search-strategy/SKILL.md +214 -0
  177. package/skills/research/automation/ai-scientist-guide/SKILL.md +228 -0
  178. package/skills/research/automation/data-collection-automation/SKILL.md +248 -0
  179. package/skills/research/automation/research-workflow-automation/SKILL.md +266 -0
  180. package/skills/research/deep-research/meta-synthesis-guide/SKILL.md +174 -0
  181. package/skills/research/deep-research/research-cog/SKILL.md +153 -0
  182. package/skills/research/deep-research/scoping-review-guide/SKILL.md +217 -0
  183. package/skills/research/deep-research/systematic-review-guide/SKILL.md +250 -0
  184. package/skills/research/funding/figshare-api/SKILL.md +163 -0
  185. package/skills/research/funding/grant-writing-guide/SKILL.md +233 -0
  186. package/skills/research/funding/nsf-grant-guide/SKILL.md +206 -0
  187. package/skills/research/funding/open-science-guide/SKILL.md +255 -0
  188. package/skills/research/funding/zenodo-api/SKILL.md +174 -0
  189. package/skills/research/methodology/action-research-guide/SKILL.md +201 -0
  190. package/skills/research/methodology/experimental-design-guide/SKILL.md +236 -0
  191. package/skills/research/methodology/grad-school-guide/SKILL.md +182 -0
  192. package/skills/research/methodology/grounded-theory-guide/SKILL.md +171 -0
  193. package/skills/research/methodology/mixed-methods-guide/SKILL.md +208 -0
  194. package/skills/research/methodology/qualitative-research-guide/SKILL.md +234 -0
  195. package/skills/research/methodology/scientify-idea-generation/SKILL.md +222 -0
  196. package/skills/research/paper-review/paper-reading-assistant/SKILL.md +266 -0
  197. package/skills/research/paper-review/peer-review-guide/SKILL.md +227 -0
  198. package/skills/research/paper-review/rebuttal-writing-guide/SKILL.md +185 -0
  199. package/skills/research/paper-review/scientify-write-review-paper/SKILL.md +209 -0
  200. package/skills/tools/code-exec/jupyter-notebook-guide/SKILL.md +178 -0
  201. package/skills/tools/code-exec/python-reproducibility-guide/SKILL.md +341 -0
  202. package/skills/tools/code-exec/r-reproducibility-guide/SKILL.md +236 -0
  203. package/skills/tools/code-exec/sandbox-execution-guide/SKILL.md +221 -0
  204. package/skills/tools/diagram/mermaid-diagram-guide/SKILL.md +269 -0
  205. package/skills/tools/diagram/plantuml-guide/SKILL.md +397 -0
  206. package/skills/tools/diagram/scientific-illustration-guide/SKILL.md +225 -0
  207. package/skills/tools/document/anystyle-api/SKILL.md +199 -0
  208. package/skills/tools/document/grobid-pdf-parsing/SKILL.md +294 -0
  209. package/skills/tools/document/markdown-academic-guide/SKILL.md +217 -0
  210. package/skills/tools/document/pdf-extraction-guide/SKILL.md +321 -0
  211. package/skills/tools/knowledge-graph/knowledge-graph-construction/SKILL.md +306 -0
  212. package/skills/tools/knowledge-graph/ontology-design-guide/SKILL.md +214 -0
  213. package/skills/tools/knowledge-graph/rag-methodology-guide/SKILL.md +325 -0
  214. package/skills/tools/ocr-translate/formula-recognition-guide/SKILL.md +367 -0
  215. package/skills/tools/ocr-translate/handwriting-recognition-guide/SKILL.md +211 -0
  216. package/skills/tools/ocr-translate/latex-ocr-guide/SKILL.md +204 -0
  217. package/skills/tools/ocr-translate/multilingual-research-guide/SKILL.md +234 -0
  218. package/skills/tools/scraping/academic-web-scraping/SKILL.md +326 -0
  219. package/skills/tools/scraping/api-data-collection-guide/SKILL.md +301 -0
  220. package/skills/tools/scraping/web-scraping-ethics-guide/SKILL.md +250 -0
  221. package/skills/writing/citation/bibtex-management-guide/SKILL.md +246 -0
  222. package/skills/writing/citation/citation-style-guide/SKILL.md +248 -0
  223. package/skills/writing/citation/reference-manager-comparison/SKILL.md +208 -0
  224. package/skills/writing/citation/zotero-api/SKILL.md +188 -0
  225. package/skills/writing/composition/abstract-writing-guide/SKILL.md +188 -0
  226. package/skills/writing/composition/discussion-writing-guide/SKILL.md +194 -0
  227. package/skills/writing/composition/introduction-writing-guide/SKILL.md +194 -0
  228. package/skills/writing/composition/literature-review-writing/SKILL.md +196 -0
  229. package/skills/writing/composition/methods-section-guide/SKILL.md +185 -0
  230. package/skills/writing/composition/response-to-reviewers/SKILL.md +215 -0
  231. package/skills/writing/composition/scientific-writing-guide/SKILL.md +152 -0
  232. package/skills/writing/latex/bibliography-management-guide/SKILL.md +206 -0
  233. package/skills/writing/latex/latex-drawing-guide/SKILL.md +234 -0
  234. package/skills/writing/latex/latex-ecosystem-guide/SKILL.md +240 -0
  235. package/skills/writing/latex/math-typesetting-guide/SKILL.md +231 -0
  236. package/skills/writing/latex/overleaf-collaboration-guide/SKILL.md +211 -0
  237. package/skills/writing/latex/tikz-diagrams-guide/SKILL.md +211 -0
  238. package/skills/writing/polish/academic-translation-guide/SKILL.md +175 -0
  239. package/skills/writing/polish/academic-writing-refiner/SKILL.md +143 -0
  240. package/skills/writing/polish/ai-writing-humanizer/SKILL.md +178 -0
  241. package/skills/writing/polish/grammar-checker-guide/SKILL.md +184 -0
  242. package/skills/writing/polish/plagiarism-detection-guide/SKILL.md +167 -0
  243. package/skills/writing/templates/beamer-presentation-guide/SKILL.md +263 -0
  244. package/skills/writing/templates/conference-paper-template/SKILL.md +219 -0
  245. package/skills/writing/templates/thesis-template-guide/SKILL.md +200 -0
  246. package/skills/writing/templates/thesis-writing-guide/SKILL.md +220 -0
  247. package/src/tools/arxiv.ts +131 -0
  248. package/src/tools/crossref.ts +112 -0
  249. package/src/tools/openalex.ts +174 -0
  250. package/src/tools/pubmed.ts +166 -0
  251. package/src/tools/semantic-scholar.ts +108 -0
  252. package/src/tools/unpaywall.ts +58 -0
@@ -0,0 +1,447 @@
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+ {
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+ "version": "1.0.0",
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+ "generated": "2026-03-09T15:25:29.810Z",
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+ "categories": [
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+ "reference-mgr",
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+ "note-knowledge",
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+ "communication",
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+ "email",
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+ "cloud-docs",
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+ "ai-platform",
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+ "data-platform",
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+ "dev-platform",
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+ "repository",
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+ "academic-db",
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+ "browser",
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+ "database"
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+ ],
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+ "configs": [
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+ {
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+ "id": "academia-mcp",
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+ "name": "Academia MCP",
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+ "description": "Tools for automatic scientific research",
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+ "category": "academic-db",
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+ "path": "mcp-configs/academic-db/academia-mcp.json"
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+ },
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+ {
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+ "id": "academic-paper-explorer",
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+ "name": "Academic Paper Explorer",
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+ "description": "Academic paper discovery via arXiv and Semantic Scholar",
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+ "category": "academic-db",
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+ "path": "mcp-configs/academic-db/academic-paper-explorer.json"
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+ },
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+ {
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+ "id": "academic-search-mcp-server",
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+ "name": "Academic Paper Search",
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+ "description": "Academic Paper Search MCP for Semantic Scholar and Crossref APIs",
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+ "category": "academic-db",
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+ "path": "mcp-configs/academic-db/academic-search-mcp-server.json"
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+ },
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+ {
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+ "id": "agentinterviews-mcp",
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+ "name": "Agent Interviews",
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+ "description": "AI-powered qualitative research interviews at scale",
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+ "category": "academic-db",
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+ "path": "mcp-configs/academic-db/agentinterviews-mcp.json"
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+ },
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+ {
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+ "id": "all-in-mcp",
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+ "name": "All-in MCP",
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+ "description": "Academic paper search and PDF processing",
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+ "category": "academic-db",
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+ "path": "mcp-configs/academic-db/all-in-mcp.json"
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+ },
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+ {
55
+ "id": "apple-health-mcp",
56
+ "name": "Apple Health Data",
57
+ "description": "Access exported Apple Health data with analytics",
58
+ "category": "academic-db",
59
+ "path": "mcp-configs/academic-db/apple-health-mcp.json"
60
+ },
61
+ {
62
+ "id": "arxiv-latex-mcp",
63
+ "name": "arXiv LaTeX Source",
64
+ "description": "Access arXiv papers via LaTeX source for better math handling",
65
+ "category": "academic-db",
66
+ "path": "mcp-configs/academic-db/arxiv-latex-mcp.json"
67
+ },
68
+ {
69
+ "id": "arxiv-mcp-server",
70
+ "name": "arXiv Search",
71
+ "description": "Search ArXiv research papers",
72
+ "category": "academic-db",
73
+ "path": "mcp-configs/academic-db/arxiv-mcp-server.json"
74
+ },
75
+ {
76
+ "id": "bgpt-mcp",
77
+ "name": "BGPT Paper Search",
78
+ "description": "Search paper data from any AI tool",
79
+ "category": "academic-db",
80
+ "path": "mcp-configs/academic-db/bgpt-mcp.json"
81
+ },
82
+ {
83
+ "id": "biomcp",
84
+ "name": "BioMCP",
85
+ "description": "Biomedical research MCP for PubMed, ClinicalTrials, and MyVariant",
86
+ "category": "academic-db",
87
+ "path": "mcp-configs/academic-db/biomcp.json"
88
+ },
89
+ {
90
+ "id": "biothings-mcp",
91
+ "name": "BioThings API",
92
+ "description": "BioThings API for genes, variants, drugs, and taxonomy",
93
+ "category": "academic-db",
94
+ "path": "mcp-configs/academic-db/biothings-mcp.json"
95
+ },
96
+ {
97
+ "id": "catalysishub-mcp-server",
98
+ "name": "Catalysis Hub",
99
+ "description": "Search Catalysis Hub database for computational catalysis",
100
+ "category": "academic-db",
101
+ "path": "mcp-configs/academic-db/catalysishub-mcp-server.json"
102
+ },
103
+ {
104
+ "id": "ChatSpatial",
105
+ "name": "ChatSpatial",
106
+ "description": "Spatial transcriptomics analysis via natural language",
107
+ "category": "academic-db",
108
+ "path": "mcp-configs/academic-db/ChatSpatial.json"
109
+ },
110
+ {
111
+ "id": "clinicaltrialsgov-mcp-server",
112
+ "name": "ClinicalTrials.gov",
113
+ "description": "ClinicalTrials.gov v2 API search and analysis",
114
+ "category": "academic-db",
115
+ "path": "mcp-configs/academic-db/clinicaltrialsgov-mcp-server.json"
116
+ },
117
+ {
118
+ "id": "deep-research-mcp",
119
+ "name": "Deep Research",
120
+ "description": "Deep research via OpenAI or open models",
121
+ "category": "academic-db",
122
+ "path": "mcp-configs/academic-db/deep-research-mcp.json"
123
+ },
124
+ {
125
+ "id": "dicom-mcp",
126
+ "name": "DICOM Medical Imaging",
127
+ "description": "DICOM integration for medical imaging",
128
+ "category": "academic-db",
129
+ "path": "mcp-configs/academic-db/dicom-mcp.json"
130
+ },
131
+ {
132
+ "id": "enrichr-mcp-server",
133
+ "name": "Enrichr Gene Set Analysis",
134
+ "description": "Gene set enrichment analysis using Enrichr API",
135
+ "category": "academic-db",
136
+ "path": "mcp-configs/academic-db/enrichr-mcp-server.json"
137
+ },
138
+ {
139
+ "id": "fec-mcp-server",
140
+ "name": "FEC Campaign Finance",
141
+ "description": "Query FEC campaign finance data",
142
+ "category": "academic-db",
143
+ "path": "mcp-configs/academic-db/fec-mcp-server.json"
144
+ },
145
+ {
146
+ "id": "fhir-mcp",
147
+ "name": "FHIR Healthcare API",
148
+ "description": "FHIR API for healthcare data interoperability",
149
+ "category": "academic-db",
150
+ "path": "mcp-configs/academic-db/fhir-mcp.json"
151
+ },
152
+ {
153
+ "id": "fhir-mcp-server-themomentum",
154
+ "name": "FHIR Patient History",
155
+ "description": "FHIR server for patient history queries",
156
+ "category": "academic-db",
157
+ "path": "mcp-configs/academic-db/fhir-mcp-server-themomentum.json"
158
+ },
159
+ {
160
+ "id": "gget-mcp",
161
+ "name": "gget Bioinformatics",
162
+ "description": "Bioinformatics toolkit for genomics queries",
163
+ "category": "academic-db",
164
+ "path": "mcp-configs/academic-db/gget-mcp.json"
165
+ },
166
+ {
167
+ "id": "google-researcher-mcp",
168
+ "name": "Google Researcher",
169
+ "description": "Comprehensive research tools for web, academic, patents",
170
+ "category": "academic-db",
171
+ "path": "mcp-configs/academic-db/google-researcher-mcp.json"
172
+ },
173
+ {
174
+ "id": "idea-reality-mcp",
175
+ "name": "Idea Reality Check",
176
+ "description": "Pre-build reality check detecting existing competition",
177
+ "category": "academic-db",
178
+ "path": "mcp-configs/academic-db/idea-reality-mcp.json"
179
+ },
180
+ {
181
+ "id": "legiscan-mcp",
182
+ "name": "LegiScan",
183
+ "description": "Access legislative data from 50 US states",
184
+ "category": "academic-db",
185
+ "path": "mcp-configs/academic-db/legiscan-mcp.json"
186
+ },
187
+ {
188
+ "id": "lex",
189
+ "name": "Lex UK Legal API",
190
+ "description": "UK legal API for AI agents and researchers",
191
+ "category": "academic-db",
192
+ "path": "mcp-configs/academic-db/lex.json"
193
+ },
194
+ {
195
+ "id": "Adaptive-Graph-of-Thoughts-MCP-server",
196
+ "name": "Adaptive Graph of Thoughts MCP Server",
197
+ "description": "LLM reasoning framework for scientific research using adaptive graph-of-thoughts",
198
+ "category": "ai-platform",
199
+ "path": "mcp-configs/ai-platform/Adaptive-Graph-of-Thoughts-MCP-server.json"
200
+ },
201
+ {
202
+ "id": "ai-counsel",
203
+ "name": "AI Counsel",
204
+ "description": "Multi-round debate between AI models for reaching consensus on complex questions",
205
+ "category": "ai-platform",
206
+ "path": "mcp-configs/ai-platform/ai-counsel.json"
207
+ },
208
+ {
209
+ "id": "atlas-mcp-server",
210
+ "name": "Atlas MCP Server",
211
+ "description": "Neo4j-powered task management with deep research capabilities for complex projects",
212
+ "category": "ai-platform",
213
+ "path": "mcp-configs/ai-platform/atlas-mcp-server.json"
214
+ },
215
+ {
216
+ "id": "counsel-mcp",
217
+ "name": "Counsel MCP",
218
+ "description": "Strategic reasoning and multi-perspective analysis for complex decision-making",
219
+ "category": "ai-platform",
220
+ "path": "mcp-configs/ai-platform/counsel-mcp.json"
221
+ },
222
+ {
223
+ "id": "cross-llm-mcp",
224
+ "name": "Cross-LLM MCP",
225
+ "description": "Cross-LLM communication and memory sharing between different AI model instances",
226
+ "category": "ai-platform",
227
+ "path": "mcp-configs/ai-platform/cross-llm-mcp.json"
228
+ },
229
+ {
230
+ "id": "gptr-mcp",
231
+ "name": "GPTR MCP",
232
+ "description": "Deep research via GPT Researcher MCP protocol for automated report generation",
233
+ "category": "ai-platform",
234
+ "path": "mcp-configs/ai-platform/gptr-mcp.json"
235
+ },
236
+ {
237
+ "id": "decipher-research-agent",
238
+ "name": "Decipher Research Agent",
239
+ "description": "Turn topics and links into AI research notebooks with structured summaries",
240
+ "category": "browser",
241
+ "path": "mcp-configs/browser/decipher-research-agent.json"
242
+ },
243
+ {
244
+ "id": "deep-research",
245
+ "name": "Deep Research",
246
+ "description": "AI research assistant using Gemini and Google ADK for planning and compiling research",
247
+ "category": "browser",
248
+ "path": "mcp-configs/browser/deep-research.json"
249
+ },
250
+ {
251
+ "id": "everything-claude-code",
252
+ "name": "Everything Claude Code",
253
+ "description": "Skills, memory, and research-first development workflows for Claude Code enhancement",
254
+ "category": "browser",
255
+ "path": "mcp-configs/browser/everything-claude-code.json"
256
+ },
257
+ {
258
+ "id": "gpt-researcher",
259
+ "name": "GPT Researcher",
260
+ "description": "Autonomous agent for deep research on any topic with comprehensive report generation",
261
+ "category": "browser",
262
+ "path": "mcp-configs/browser/gpt-researcher.json"
263
+ },
264
+ {
265
+ "id": "heurist-agent-framework",
266
+ "name": "Heurist Agent Framework",
267
+ "description": "Multi-interface AI agent with reasoning and research capabilities across platforms",
268
+ "category": "browser",
269
+ "path": "mcp-configs/browser/heurist-agent-framework.json"
270
+ },
271
+ {
272
+ "id": "4everland-hosting-mcp",
273
+ "name": "4EVERLAND Hosting MCP",
274
+ "description": "Deploy AI-generated code to decentralized storage networks for permanent hosting",
275
+ "category": "data-platform",
276
+ "path": "mcp-configs/data-platform/4everland-hosting-mcp.json"
277
+ },
278
+ {
279
+ "id": "context-keeper",
280
+ "name": "Context Keeper",
281
+ "description": "Wide-recall RAG with vector, timeline, and knowledge graph retrieval strategies",
282
+ "category": "data-platform",
283
+ "path": "mcp-configs/data-platform/context-keeper.json"
284
+ },
285
+ {
286
+ "id": "context7",
287
+ "name": "Context7",
288
+ "description": "Context management for AI agents with cloud sync powered by Upstash",
289
+ "category": "data-platform",
290
+ "path": "mcp-configs/data-platform/context7.json"
291
+ },
292
+ {
293
+ "id": "contextstream-mcp",
294
+ "name": "ContextStream MCP",
295
+ "description": "Universal persistent memory with semantic code search and change tracking",
296
+ "category": "data-platform",
297
+ "path": "mcp-configs/data-platform/contextstream-mcp.json"
298
+ },
299
+ {
300
+ "id": "email-mcp",
301
+ "name": "Email MCP",
302
+ "description": "Unified email across Gmail, Outlook, iCloud, and IMAP for search, send, and organize",
303
+ "category": "data-platform",
304
+ "path": "mcp-configs/data-platform/email-mcp.json"
305
+ },
306
+ {
307
+ "id": "agent-memory",
308
+ "name": "Agent Memory",
309
+ "description": "Three-layer memory system with semantic search and knowledge graph for AI agents",
310
+ "category": "note-knowledge",
311
+ "path": "mcp-configs/note-knowledge/agent-memory.json"
312
+ },
313
+ {
314
+ "id": "aimemo",
315
+ "name": "AIMemo",
316
+ "description": "Zero-dependency MCP memory server, single binary, 100% local storage and recall",
317
+ "category": "note-knowledge",
318
+ "path": "mcp-configs/note-knowledge/aimemo.json"
319
+ },
320
+ {
321
+ "id": "ApeRAG",
322
+ "name": "ApeRAG",
323
+ "description": "Production-ready RAG platform with Graph RAG and vector search for knowledge retrieval",
324
+ "category": "note-knowledge",
325
+ "path": "mcp-configs/note-knowledge/ApeRAG.json"
326
+ },
327
+ {
328
+ "id": "biel-mcp",
329
+ "name": "Biel MCP",
330
+ "description": "Connect IDE to product documentation via Biel.ai RAG for instant knowledge retrieval",
331
+ "category": "note-knowledge",
332
+ "path": "mcp-configs/note-knowledge/biel-mcp.json"
333
+ },
334
+ {
335
+ "id": "cognee",
336
+ "name": "Cognee",
337
+ "description": "Memory manager using graph and vector stores with 30+ data sources for persistent agent knowledge",
338
+ "category": "note-knowledge",
339
+ "path": "mcp-configs/note-knowledge/cognee.json"
340
+ },
341
+ {
342
+ "id": "context-awesome",
343
+ "name": "Context Awesome",
344
+ "description": "Query 8500+ curated awesome lists with 1M+ items for discovering tools and resources",
345
+ "category": "note-knowledge",
346
+ "path": "mcp-configs/note-knowledge/context-awesome.json"
347
+ },
348
+ {
349
+ "id": "context-mcp",
350
+ "name": "Context MCP",
351
+ "description": "Self-hosted MCP server for semantic search over documentation collections",
352
+ "category": "note-knowledge",
353
+ "path": "mcp-configs/note-knowledge/context-mcp.json"
354
+ },
355
+ {
356
+ "id": "conversation-handoff-mcp",
357
+ "name": "Conversation Handoff MCP",
358
+ "description": "Hand off conversation context between Claude Desktop projects seamlessly",
359
+ "category": "note-knowledge",
360
+ "path": "mcp-configs/note-knowledge/conversation-handoff-mcp.json"
361
+ },
362
+ {
363
+ "id": "cortex",
364
+ "name": "Cortex",
365
+ "description": "Local-first knowledge graph for developers with query, find, and watch capabilities",
366
+ "category": "note-knowledge",
367
+ "path": "mcp-configs/note-knowledge/cortex.json"
368
+ },
369
+ {
370
+ "id": "devrag",
371
+ "name": "DevRAG",
372
+ "description": "Lightweight local RAG for semantic search over markdown files and documentation",
373
+ "category": "note-knowledge",
374
+ "path": "mcp-configs/note-knowledge/devrag.json"
375
+ },
376
+ {
377
+ "id": "easy-obsidian-mcp",
378
+ "name": "Easy Obsidian MCP",
379
+ "description": "Interact with Obsidian vaults through MCP for reading, writing, and searching notes",
380
+ "category": "note-knowledge",
381
+ "path": "mcp-configs/note-knowledge/easy-obsidian-mcp.json"
382
+ },
383
+ {
384
+ "id": "engram",
385
+ "name": "Engram",
386
+ "description": "Intelligence layer for AI agents with explicit and implicit memory consolidation",
387
+ "category": "note-knowledge",
388
+ "path": "mcp-configs/note-knowledge/engram.json"
389
+ },
390
+ {
391
+ "id": "gnosis-mcp",
392
+ "name": "Gnosis MCP",
393
+ "description": "Zero-config MCP server for searchable documentation with automatic indexing",
394
+ "category": "note-knowledge",
395
+ "path": "mcp-configs/note-knowledge/gnosis-mcp.json"
396
+ },
397
+ {
398
+ "id": "graphlit-mcp-server",
399
+ "name": "Graphlit MCP Server",
400
+ "description": "Ingest from Slack, Discord, Drive, and GitHub into a RAG-ready knowledge base",
401
+ "category": "note-knowledge",
402
+ "path": "mcp-configs/note-knowledge/graphlit-mcp-server.json"
403
+ },
404
+ {
405
+ "id": "In-Memoria",
406
+ "name": "In Memoria",
407
+ "description": "Persistent intelligence with cumulative memory and pattern recognition for AI agents",
408
+ "category": "note-knowledge",
409
+ "path": "mcp-configs/note-knowledge/In-Memoria.json"
410
+ },
411
+ {
412
+ "id": "arxiv-cli",
413
+ "name": "arXiv CLI",
414
+ "description": "AI-ready search and fetch tool for arXiv papers",
415
+ "category": "reference-mgr",
416
+ "path": "mcp-configs/reference-mgr/arxiv-cli.json"
417
+ },
418
+ {
419
+ "id": "arxiv-search-mcp",
420
+ "name": "arXiv Search MCP",
421
+ "description": "Search and fetch papers from arXiv.org",
422
+ "category": "reference-mgr",
423
+ "path": "mcp-configs/reference-mgr/arxiv-search-mcp.json"
424
+ },
425
+ {
426
+ "id": "chiken",
427
+ "name": "Chiken",
428
+ "description": "Zotero, RAG, MCP, and deep research",
429
+ "category": "reference-mgr",
430
+ "path": "mcp-configs/reference-mgr/chiken.json"
431
+ },
432
+ {
433
+ "id": "claude-scholar",
434
+ "name": "Claude Scholar",
435
+ "description": "Academic research config with Zotero MCP integration",
436
+ "category": "reference-mgr",
437
+ "path": "mcp-configs/reference-mgr/claude-scholar.json"
438
+ },
439
+ {
440
+ "id": "devonthink-mcp",
441
+ "name": "DEVONthink MCP",
442
+ "description": "DEVONthink with bibliography metadata and AI classification",
443
+ "category": "reference-mgr",
444
+ "path": "mcp-configs/reference-mgr/devonthink-mcp.json"
445
+ }
446
+ ]
447
+ }
@@ -0,0 +1,21 @@
1
+ {
2
+ "id": "research-plugins",
3
+ "version": "1.0.0",
4
+ "name": "Research Plugins",
5
+ "description": "173 academic research skills, 13 agent tools & 61 MCP configs for Research-Claw",
6
+ "skills": ["./skills"],
7
+ "configSchema": {
8
+ "type": "object",
9
+ "additionalProperties": false,
10
+ "properties": {
11
+ "semanticScholarApiKey": { "type": "string" }
12
+ }
13
+ },
14
+ "uiHints": {
15
+ "semanticScholarApiKey": {
16
+ "label": "Semantic Scholar API Key (optional)",
17
+ "help": "Get free key from semanticscholar.org for higher rate limits.",
18
+ "sensitive": true
19
+ }
20
+ }
21
+ }
package/package.json ADDED
@@ -0,0 +1,61 @@
1
+ {
2
+ "name": "@wentorai/research-plugins",
3
+ "version": "1.0.0",
4
+ "type": "module",
5
+ "description": "173 academic research skills, MCP configs, and agent tools for Research-Claw and AI agents",
6
+ "keywords": [
7
+ "agent-skills",
8
+ "claude",
9
+ "cursor",
10
+ "windsurf",
11
+ "opencode",
12
+ "academic",
13
+ "research",
14
+ "scientific-writing",
15
+ "literature-review",
16
+ "research-claw",
17
+ "wentor",
18
+ "ai4s",
19
+ "openclaw"
20
+ ],
21
+ "files": [
22
+ "skills/",
23
+ "mcp-configs/",
24
+ "curated/",
25
+ "src/",
26
+ "index.ts",
27
+ "openclaw.plugin.json",
28
+ "README.md",
29
+ "LICENSE"
30
+ ],
31
+ "scripts": {
32
+ "validate": "node --experimental-strip-types scripts/validate.ts",
33
+ "catalog": "node --experimental-strip-types scripts/catalog.ts",
34
+ "sync-registry": "node --experimental-strip-types scripts/sync-registry.ts"
35
+ },
36
+ "engines": {
37
+ "node": ">=22.6.0"
38
+ },
39
+ "openclaw": {
40
+ "extensions": [
41
+ "./index.ts"
42
+ ]
43
+ },
44
+ "dependencies": {
45
+ "@sinclair/typebox": "0.34.48"
46
+ },
47
+ "peerDependencies": {
48
+ "openclaw": "*"
49
+ },
50
+ "peerDependenciesMeta": {
51
+ "openclaw": {
52
+ "optional": true
53
+ }
54
+ },
55
+ "license": "MIT",
56
+ "homepage": "https://wentor.ai",
57
+ "repository": {
58
+ "type": "git",
59
+ "url": "https://github.com/wentorai/research-plugins"
60
+ }
61
+ }