@vitessce/vit-s 2.0.2 → 2.0.3

package/dist/plugins.test.fixtures.js

@@ -1,76 +0,0 @@
-export const convenienceFileDefsCollapsed = {
-    version: '1.0.15',
-    name: 'My config name',
-    description: 'My config description',
-    initStrategy: 'auto',
-    datasets: [
-        {
-            files: [
-                {
-                    fileType: 'anndata.convenience.zarr',
-                    url: 'http://localhost:8000/my_anndata.zarr',
-                    options: {
-                        cells: {
-                            xy: 'obsm/centroids',
-                        },
-                        cellSets: [
-                            {
-                                groupName: 'Leiden',
-                                setName: 'obs/leiden',
-                            },
-                        ],
-                    },
-                },
-            ],
-            name: 'A',
-            uid: 'A',
-        },
-    ],
-    layout: [],
-};
-export function pluginExpandAnnDataConvenience(fileDef) {
-    return [
-        {
-            fileType: 'anndata-cells.zarr',
-            url: fileDef.url,
-            options: fileDef.options.cells,
-        },
-        {
-            fileType: 'anndata-cell-sets.zarr',
-            url: fileDef.url,
-            options: fileDef.options.cellSets,
-        },
-    ];
-}
-export const convenienceFileDefsExpanded = {
-    version: '1.0.15',
-    name: 'My config name',
-    description: 'My config description',
-    initStrategy: 'auto',
-    datasets: [
-        {
-            files: [
-                {
-                    fileType: 'anndata-cells.zarr',
-                    url: 'http://localhost:8000/my_anndata.zarr',
-                    options: {
-                        xy: 'obsm/centroids',
-                    },
-                },
-                {
-                    fileType: 'anndata-cell-sets.zarr',
-                    url: 'http://localhost:8000/my_anndata.zarr',
-                    options: [
-                        {
-                            groupName: 'Leiden',
-                            setName: 'obs/leiden',
-                        },
-                    ],
-                },
-            ],
-            name: 'A',
-            uid: 'A',
-        },
-    ],
-    layout: [],
-};

package/dist/plugins.test.js

@@ -1,30 +0,0 @@
-/* eslint-disable camelcase */
-import { registerPluginFileType, registerPluginJointFileType, getFileTypeDataTypeMapping, getJointFileTypes, } from './plugins';
-import { convenienceFileDefsCollapsed, convenienceFileDefsExpanded, pluginExpandAnnDataConvenience, } from './plugins.test.fixtures';
-import { initialize, } from './view-config-utils';
-describe('src/app/plugins.js', () => {
-    describe('getFileTypeDataTypeMapping', () => {
-        it('returns the correct data type for built-in file types', () => {
-            const dataType = getFileTypeDataTypeMapping()['image.raster.json'];
-            expect(dataType).toEqual('image');
-        });
-        it('returns the correct data type for plugin file types', () => {
-            registerPluginFileType('plugin-cells.json', 'cells', null, null);
-            const dataType = getFileTypeDataTypeMapping()['plugin-cells.json'];
-            expect(dataType).toEqual('cells');
-        });
-    });
-    describe('convenience file types', () => {
-        it('registers plugin convenience file types', () => {
-            registerPluginJointFileType('anndata.convenience.zarr', pluginExpandAnnDataConvenience);
-            const expansionFuncs = getJointFileTypes();
-            expect(Object.keys(expansionFuncs).includes('anndata.convenience.zarr')).toBeTruthy();
-            expect(typeof expansionFuncs['anndata.convenience.zarr']).toEqual('function');
-        });
-        it('uses plugin convenience file types in view config initialization', () => {
-            registerPluginJointFileType('anndata.convenience.zarr', pluginExpandAnnDataConvenience);
-            expect(initialize(convenienceFileDefsCollapsed).datasets)
-                .toEqual(convenienceFileDefsExpanded.datasets);
-        });
-    });
-});

package/dist/schemas/config-0.1.0.schema.json

@@ -1,84 +0,0 @@
-{
-    "$schema": "http://json-schema.org/draft-07/schema#",
-    "$id": "https://github.com/vitessce/vitessce/#dataset",
-    "title": "Vitessce data set",
-    "type": "object",
-    "definitions": {
-        "components": {
-            "type": "array",
-            "items": {
-                "type": "object",
-                "additionalProperties": false,
-                "required": ["component", "x", "y"],
-                "properties": {
-                    "component": { "type": "string" },
-                    "props": { "type": "object" },
-                    "x": { "type": "integer" },
-                    "y": { "type": "integer" },
-                    "w": { "type": "integer" },
-                    "h": { "type": "integer" }
-                }
-            }
-        },
-        "requestInit": {
-            "type": "object",
-            "additionalProperties": false,
-            "required": [],
-            "properties": {
-                "method": {
-                    "type": "string"
-                },
-                "headers": {
-                    "type": "object"
-                },
-                "body": {
-                    "type": "string"
-                },
-                "mode": {
-                    "type": "string"
-                },
-                "credentials": {
-                    "type": "string"
-                },
-                "cache": {
-                    "type": "string"
-                },
-                "redirect": {
-                    "type": "string"
-                },
-                "referrer": {
-                    "type": "string"
-                },
-                "integrity": {
-                    "type": "string"
-                }
-            }
-        }
-    },
-    "additionalProperties": false,
-    "required": ["version", "name", "layers"],
-    "properties": {
-        "name": { "type": "string" },
-        "public": { "type": "boolean" },
-        "description": { "type": "string" },
-        "layers": {
-            "type": "array",
-            "items": {
-                "type": "object",
-                "additionalProperties": false,
-                "required": ["name", "type", "fileType", "url"],
-                "properties": {
-                    "name": { "type": "string" },
-                    "type": { "type": "string" },
-                    "fileType": { "type": "string" },
-                    "url": { "type": "string" },
-                    "requestInit": { "$ref": "#/definitions/requestInit" }
-                }
-            }
-        },
-        "staticLayout": { "$ref": "#/definitions/components" },
-        "version": {
-            "type": "string", "enum": ["0.1.0"]
-        }
-    }
-}