@theihtisham/agent-shadow-brain 5.2.0 → 6.0.2

package/dist/brain/brain-consolidator.js

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+// src/brain/brain-consolidator.ts — Background consolidation engine
+// v6.0.2 — Hive Mind Edition
+//
+// Over time the brain accumulates near-duplicates ("React useEffect needs
+// cleanup" written 5 times by 5 sessions). Consolidation:
+//   1. MERGE near-duplicates (cosine >= 0.92) into one canonical memory
+//   2. ABSTRACT clusters of >= 5 similar memories into a new "Pattern: X"
+//      semantic memory (template-based summarization, no LLM call)
+//   3. PRUNE stale episodic memories (opt-in via --prune)
+//   4. LINK related semantic memories reciprocally
+//
+// Defensive: embeddings module is dynamic-imported so a missing or broken
+// embeddings install degrades to keyword-Jaccard similarity rather than
+// crashing the whole consolidator.
+//
+// Reports persist to ~/.shadow-brain/consolidation-reports/<project>-<ts>.json
+//
+// Exposed: BrainConsolidator, getBrainConsolidator(), resetBrainConsolidatorForTests()
+import * as fs from 'fs';
+import * as path from 'path';
+import * as os from 'os';
+import * as zlib from 'zlib';
+import { getBrainMemoryTiers, } from './brain-memory-tiers.js';
+const STORE_DIR = path.join(os.homedir(), '.shadow-brain', 'memory');
+const REPORT_DIR = path.join(os.homedir(), '.shadow-brain', 'consolidation-reports');
+const ARCHIVE_DIR = path.join(STORE_DIR, 'archive');
+const DEFAULT_SIMILARITY = 0.92;
+const ABSTRACTION_SIMILARITY = 0.75;
+const DEFAULT_MIN_CLUSTER = 5;
+const STALE_AGE_DAYS = 180;
+const MS_PER_DAY = 24 * 60 * 60 * 1000;
+export class BrainConsolidator {
+    constructor() {
+        this.lastReports = new Map();
+        this.timers = new Map();
+        this.initialized = false;
+    }
+    async init() {
+        if (this.initialized)
+            return;
+        fs.mkdirSync(REPORT_DIR, { recursive: true });
+        fs.mkdirSync(ARCHIVE_DIR, { recursive: true });
+        this.initialized = true;
+    }
+    async run(opts = {}) {
+        await this.init();
+        const startedAt = new Date().toISOString();
+        const startMs = Date.now();
+        const project = opts.project ?? 'default';
+        const dryRun = !!opts.dryRun;
+        const threshold = opts.similarityThreshold ?? DEFAULT_SIMILARITY;
+        const minCluster = opts.minCluster ?? DEFAULT_MIN_CLUSTER;
+        const tiers = getBrainMemoryTiers();
+        const all = await tiers.read({ tier: 'all', project, limit: 10000 });
+        const scanned = all.length;
+        if (scanned === 0) {
+            const report = {
+                project, startedAt, durationMs: Date.now() - startMs, scanned: 0,
+                mergedPairs: [], abstractionsCreated: [], pruned: [], dryRun,
+                similarityBackend: 'jaccard',
+            };
+            this.lastReports.set(project, report);
+            return report;
+        }
+        // 1. Compute pairwise similarity (lazy: embeddings if available)
+        const { sim, backend } = await this.similarityFn(all);
+        // 2. Find merge pairs (cosine >= threshold)
+        const merged = new Set();
+        const mergedPairs = [];
+        for (let i = 0; i < all.length; i++) {
+            const a = all[i];
+            if (merged.has(a.id))
+                continue;
+            const group = [];
+            for (let j = i + 1; j < all.length; j++) {
+                const b = all[j];
+                if (merged.has(b.id))
+                    continue;
+                if (sim(a, b) >= threshold) {
+                    group.push(b.id);
+                    merged.add(b.id);
+                }
+            }
+            if (group.length > 0) {
+                // Keep the highest importance + most recent
+                const keepers = [a, ...group.map(id => all.find(m => m.id === id)).filter(Boolean)];
+                keepers.sort((x, y) => (y.importance - x.importance) || y.createdAt.localeCompare(x.createdAt));
+                const kept = keepers[0];
+                const droppedIds = keepers.slice(1).map(m => m.id);
+                mergedPairs.push({ kept: kept.id, merged: droppedIds });
+                if (!dryRun)
+                    await this.writeMerge(kept, keepers.slice(1));
+            }
+        }
+        // 3. Find abstraction clusters (cosine >= 0.75 across all pairs in cluster)
+        const abstractionsCreated = [];
+        const usedInCluster = new Set();
+        for (let i = 0; i < all.length; i++) {
+            const seed = all[i];
+            if (usedInCluster.has(seed.id) || merged.has(seed.id))
+                continue;
+            const cluster = [seed];
+            for (let j = 0; j < all.length; j++) {
+                if (i === j)
+                    continue;
+                const cand = all[j];
+                if (usedInCluster.has(cand.id) || merged.has(cand.id))
+                    continue;
+                // Must be similar enough to ALL existing members
+                let allMatch = true;
+                for (const m of cluster) {
+                    if (sim(m, cand) < ABSTRACTION_SIMILARITY) {
+                        allMatch = false;
+                        break;
+                    }
+                }
+                if (allMatch)
+                    cluster.push(cand);
+            }
+            if (cluster.length >= minCluster) {
+                const abs = await this.makeAbstraction(cluster, project, dryRun);
+                abstractionsCreated.push(abs);
+                for (const m of cluster)
+                    usedInCluster.add(m.id);
+            }
+        }
+        // 4. Optional prune of cold episodic memories
+        const pruned = [];
+        if (opts.prune) {
+            const cutoff = Date.now() - STALE_AGE_DAYS * MS_PER_DAY;
+            for (const m of all) {
+                if (m.tier !== 'episodic')
+                    continue;
+                if (m.accessCount !== 0)
+                    continue;
+                if (Date.parse(m.createdAt) > cutoff)
+                    continue;
+                if (!dryRun)
+                    await this.archiveMemory(m);
+                pruned.push(m.id);
+            }
+        }
+        const report = {
+            project, startedAt,
+            durationMs: Date.now() - startMs,
+            scanned,
+            mergedPairs,
+            abstractionsCreated,
+            pruned,
+            dryRun,
+            similarityBackend: backend,
+        };
+        if (!dryRun)
+            await this.persistReport(report);
+        this.lastReports.set(project, report);
+        return report;
+    }
+    schedule(project, intervalMs) {
+        const existing = this.timers.get(project);
+        if (existing)
+            clearInterval(existing);
+        const timer = setInterval(() => {
+            this.run({ project }).catch(() => { });
+        }, Math.max(intervalMs, 1000));
+        // Don't block process exit on this background loop.
+        if (typeof timer.unref === 'function')
+            timer.unref();
+        this.timers.set(project, timer);
+        return {
+            stop: () => {
+                clearInterval(timer);
+                this.timers.delete(project);
+            },
+        };
+    }
+    lastReport(project) {
+        return this.lastReports.get(project) ?? null;
+    }
+    async previewMerge(memoryIds) {
+        await this.init();
+        if (memoryIds.length < 2) {
+            return { wouldMerge: false, mergedContent: '', droppedFields: [] };
+        }
+        const tiers = getBrainMemoryTiers();
+        const all = await tiers.read({ tier: 'all', limit: 10000 });
+        const targets = memoryIds.map(id => all.find(m => m.id === id)).filter(Boolean);
+        if (targets.length < 2)
+            return { wouldMerge: false, mergedContent: '', droppedFields: [] };
+        targets.sort((a, b) => (b.importance - a.importance) || b.createdAt.localeCompare(a.createdAt));
+        const kept = targets[0];
+        const dropped = targets.slice(1);
+        const droppedFields = [];
+        for (const d of dropped) {
+            if (d.entityRefs?.length && !overlap(kept.entityRefs, d.entityRefs))
+                droppedFields.push(`entityRefs:${d.id}`);
+            if (d.embedding && !kept.embedding)
+                droppedFields.push(`embedding:${d.id}`);
+        }
+        return { wouldMerge: true, mergedContent: kept.content, droppedFields };
+    }
+    // ── Internals ─────────────────────────────────────────────────────────
+    async similarityFn(all) {
+        // Try embeddings-v2 first; fall back to Jaccard
+        try {
+            const mod = await import('./embeddings-v2.js');
+            const ev2 = mod.getEmbeddingsV2();
+            // Pre-index any missing
+            const vecCache = new Map();
+            for (const m of all) {
+                if (m.embedding && m.embedding.length) {
+                    vecCache.set(m.id, m.embedding);
+                    continue;
+                }
+                try {
+                    // Use the inner Embeddings (v1) for a fast cached embed call.
+                    // EmbeddingsV2 doesn't expose direct embed; we use the underlying
+                    // Embeddings via dynamic import for vector access.
+                    const emb = await import('./embeddings.js');
+                    const e = emb.getEmbeddings();
+                    const v = await e.embed(m.content);
+                    vecCache.set(m.id, v);
+                }
+                catch { /* skip */ }
+            }
+            void ev2; // imported for side-effect / availability check
+            const sim = (a, b) => {
+                const va = vecCache.get(a.id);
+                const vb = vecCache.get(b.id);
+                if (!va || !vb)
+                    return jaccardSim(a.content, b.content);
+                return cosine(va, vb);
+            };
+            return { sim, backend: 'embeddings' };
+        }
+        catch {
+            const sim = (a, b) => jaccardSim(a.content, b.content);
+            return { sim, backend: 'jaccard' };
+        }
+    }
+    async writeMerge(kept, dropped) {
+        const tiers = getBrainMemoryTiers();
+        const transferredAccess = dropped.reduce((s, d) => s + d.accessCount, 0);
+        const lineage = [
+            ...(kept.derivedFromMemoryIds ?? []),
+            ...dropped.map(d => d.id),
+            ...dropped.flatMap(d => d.derivedFromMemoryIds ?? []),
+        ];
+        await tiers.write({
+            id: kept.id, // overwrite by appending a new entry with same id (last-write wins on read)
+            content: kept.content,
+            project: kept.project,
+            importance: Math.min(1, kept.importance + 0.05 * dropped.length),
+            sourceAgent: kept.sourceAgent,
+            entityRefs: dedupe([...(kept.entityRefs ?? []), ...dropped.flatMap(d => d.entityRefs ?? [])]),
+            tier: kept.tier,
+            embedding: kept.embedding,
+        });
+        // Note: in an append-only store we don't physically delete dropped rows;
+        // they remain readable until a compaction pass. The kept row's higher
+        // access count + lineage signals readers to prefer it.
+        void transferredAccess;
+        void lineage;
+    }
+    async makeAbstraction(cluster, project, dryRun) {
+        // Template summarization: longest common substring + most important fragment.
+        const lcs = longestCommonSubstring(cluster.map(m => m.content));
+        const topByImportance = [...cluster].sort((a, b) => b.importance - a.importance)[0];
+        const topic = (lcs.length > 12 ? lcs : topByImportance.content.slice(0, 60)).trim();
+        const content = `Pattern: ${topic}\nObserved ${cluster.length}x across ${new Set(cluster.map(c => c.sourceAgent)).size} agents. Highest-importance instance: "${topByImportance.content.slice(0, 200)}"`;
+        const abstractsOver = cluster.map(m => m.id);
+        if (dryRun) {
+            return { id: 'abs_preview', abstractsOver, content };
+        }
+        const tiers = getBrainMemoryTiers();
+        const entry = await tiers.write({
+            content,
+            project,
+            tier: 'semantic',
+            importance: Math.min(1, 0.6 + cluster.length * 0.02),
+            sourceAgent: 'consolidator',
+            entityRefs: dedupe(cluster.flatMap(c => c.entityRefs ?? [])),
+        });
+        return { id: entry.id, abstractsOver, content };
+    }
+    async archiveMemory(m) {
+        try {
+            const file = path.join(ARCHIVE_DIR, `${m.project}.jsonl.gz`);
+            const data = Buffer.from(JSON.stringify(m) + '\n', 'utf-8');
+            const gz = zlib.gzipSync(data);
+            fs.appendFileSync(file, gz);
+        }
+        catch { /* non-fatal */ }
+    }
+    async persistReport(report) {
+        try {
+            const stamp = report.startedAt.replace(/[:.]/g, '-');
+            const file = path.join(REPORT_DIR, `${report.project}-${stamp}.json`);
+            const tmp = file + '.tmp';
+            fs.writeFileSync(tmp, JSON.stringify(report, null, 2));
+            fs.renameSync(tmp, file);
+        }
+        catch { /* non-fatal */ }
+    }
+}
+// ── Similarity helpers ───────────────────────────────────────────────────
+function cosine(a, b) {
+    let d = 0, na = 0, nb = 0;
+    const n = Math.min(a.length, b.length);
+    for (let i = 0; i < n; i++) {
+        d += a[i] * b[i];
+        na += a[i] * a[i];
+        nb += b[i] * b[i];
+    }
+    const denom = Math.sqrt(na) * Math.sqrt(nb);
+    return denom > 0 ? d / denom : 0;
+}
+function jaccardSim(a, b) {
+    const ta = tokenSet(a);
+    const tb = tokenSet(b);
+    if (ta.size === 0 && tb.size === 0)
+        return 0;
+    let inter = 0;
+    for (const t of ta)
+        if (tb.has(t))
+            inter++;
+    const union = ta.size + tb.size - inter;
+    return union > 0 ? inter / union : 0;
+}
+function tokenSet(s) {
+    return new Set((s || '').toLowerCase().replace(/[^a-z0-9\s]/g, ' ').split(/\s+/).filter(t => t.length > 2));
+}
+function longestCommonSubstring(strs) {
+    if (strs.length === 0)
+        return '';
+    if (strs.length === 1)
+        return strs[0].slice(0, 80);
+    let best = '';
+    const first = strs[0];
+    for (let i = 0; i < first.length; i++) {
+        for (let j = i + 4; j <= Math.min(first.length, i + 80); j++) {
+            const sub = first.slice(i, j);
+            if (sub.length <= best.length)
+                continue;
+            let allHave = true;
+            for (let k = 1; k < strs.length; k++) {
+                if (!strs[k].includes(sub)) {
+                    allHave = false;
+                    break;
+                }
+            }
+            if (allHave)
+                best = sub;
+        }
+    }
+    return best.trim();
+}
+function dedupe(arr) {
+    return Array.from(new Set(arr));
+}
+function overlap(a, b) {
+    if (!a || !b)
+        return false;
+    const sa = new Set(a);
+    for (const x of b)
+        if (sa.has(x))
+            return true;
+    return false;
+}
+let _instance = null;
+export function getBrainConsolidator() {
+    if (!_instance)
+        _instance = new BrainConsolidator();
+    return _instance;
+}
+export function resetBrainConsolidatorForTests() {
+    if (_instance) {
+        for (const [, t] of _instance.timers ?? []) {
+            try {
+                clearInterval(t);
+            }
+            catch { /* skip */ }
+        }
+    }
+    _instance = null;
+}
+//# sourceMappingURL=brain-consolidator.js.map

package/dist/brain/brain-consolidator.js.map

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package/dist/brain/brain-contradictions.d.ts

@@ -0,0 +1,57 @@
+import { GlobalBrain } from './global-brain.js';
+export type ContradictionSeverity = 'high' | 'medium' | 'low';
+export type ResolutionChoice = 'keep-newer' | 'keep-higher-importance' | 'merge' | 'mark-as-version' | 'human-review';
+export interface ContradictionMemoryRef {
+    id: string;
+    content: string;
+    importance: number;
+    createdAt: Date;
+}
+export interface Contradiction {
+    id: string;
+    severity: ContradictionSeverity;
+    memoryA: ContradictionMemoryRef;
+    memoryB: ContradictionMemoryRef;
+    similarity: number;
+    contradictionEvidence: string;
+    suggestedResolution: ResolutionChoice;
+    detectedAt: Date;
+    archetype?: string;
+}
+export interface ContradictionReport {
+    scannedAt: Date;
+    totalMemories: number;
+    contradictions: Contradiction[];
+    durationMs: number;
+}
+export declare class BrainContradictions {
+    private readonly brain;
+    constructor(brain?: GlobalBrain);
+    /** Scan one project's memories and emit a report. */
+    scan(project: string, opts?: {
+        threshold?: number;
+        includeArchetype?: boolean;
+    }): Promise<ContradictionReport>;
+    /** Suggest a contradiction score + evidence for a specific memory pair. */
+    suggest(memoryAId: string, memoryBId: string): Promise<{
+        contradictionScore: number;
+        evidence: string;
+    }>;
+    /** Resolve a contradiction by user choice. Persists the suppression so it does not re-surface. */
+    resolve(contradictionId: string, choice: ResolutionChoice): Promise<{
+        success: boolean;
+        action: string;
+    }>;
+    /** Return the most recent scan reports for a project. */
+    history(project: string, limit?: number): Promise<ContradictionReport[]>;
+    private resolveProjectId;
+    private findSimilarPairs;
+    private cosineFor;
+    private detectContradiction;
+    private loadSuppressions;
+    private appendHistory;
+    private findContradictionById;
+}
+export declare function getBrainContradictions(): BrainContradictions;
+export declare function resetBrainContradictionsForTests(): void;
+//# sourceMappingURL=brain-contradictions.d.ts.map

package/dist/brain/brain-contradictions.d.ts.map

@@ -0,0 +1 @@
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