@theihtisham/agent-shadow-brain 5.2.0 → 6.0.2

package/dist/brain/embeddings-v2.js

@@ -0,0 +1,344 @@
+// src/brain/embeddings-v2.ts — Indexed ANN vector store on top of Embeddings
+// v6.0.2 — Hive Mind Edition
+//
+// Composes the v1 `Embeddings` class (hashing / Ollama dense vectors) with an
+// in-memory hand-rolled HNSW-like graph index. Avoids the O(n) flat scan of
+// the v1 cache for larger corpora — target <100ms recall over 10k vectors.
+//
+// Why hand-rolled and not hnswlib-node? Zero-dep constraint, must compile
+// clean on Windows without prebuilt natives. A simplified hierarchical small-
+// world graph with greedy descent + a single-layer ef-search is plenty for
+// the corpus sizes a single developer's brain stores (typically <50k items).
+//
+// Persistence: sharded JSON files under ~/.shadow-brain/embeddings/.
+// Each shard caps at ~5MB; new docs roll over to a fresh shard.
+//
+// Auto-pull: if Ollama is reachable but no embedding model is installed,
+// POSTs to /api/pull (stream=true) for `nomic-embed-text` and emits progress
+// events so callers can show a spinner. Falls back to hashing if Ollama is
+// unreachable so this class is always usable offline.
+//
+// Exposed: EmbeddingsV2, getEmbeddingsV2(), resetEmbeddingsV2ForTests().
+//   .addDocument(id, text, metadata?)
+//   .search(query, topK)
+//   .delete(id)
+//   .count()
+//   .stats()
+//   on('pull-progress' | 'pull-complete' | 'pull-error', cb)
+import * as fs from 'fs';
+import * as path from 'path';
+import * as os from 'os';
+import { EventEmitter } from 'events';
+import { getEmbeddings } from './embeddings.js';
+const INDEX_DIR = path.join(os.homedir(), '.shadow-brain', 'embeddings');
+const SHARD_MAX_BYTES = 5 * 1024 * 1024;
+const SHARD_PREFIX = 'index-v2.';
+const DEFAULT_EF_SEARCH = 32;
+const DEFAULT_EF_CONSTRUCT = 16;
+const DEFAULT_M = 8;
+const PULL_MODEL = 'nomic-embed-text';
+export class EmbeddingsV2 extends EventEmitter {
+    constructor(opts) {
+        super();
+        this.docs = new Map();
+        this.entryPoint = null;
+        this.nextShard = 0;
+        this.currentShardBytes = 0;
+        this.initialized = false;
+        this.pullState = 'idle';
+        this.embeddings = opts?.embeddings ?? getEmbeddings();
+        this.M = opts?.M ?? DEFAULT_M;
+        this.efConstruct = opts?.efConstruct ?? DEFAULT_EF_CONSTRUCT;
+        this.efSearch = opts?.efSearch ?? DEFAULT_EF_SEARCH;
+    }
+    async init() {
+        if (this.initialized)
+            return;
+        fs.mkdirSync(INDEX_DIR, { recursive: true });
+        await this.embeddings.init();
+        this.loadShards();
+        this.maybeAutoPull().catch(err => this.emit('pull-error', err));
+        this.initialized = true;
+    }
+    /** Index a document. Replaces any prior doc with the same id. */
+    async addDocument(id, text, metadata) {
+        await this.init();
+        const vector = await this.embeddings.embed(text);
+        if (this.docs.has(id))
+            this.detachNode(id);
+        const doc = {
+            id,
+            text,
+            vector,
+            metadata,
+            neighbors: [],
+            shard: this.pickShardFor(text),
+        };
+        this.docs.set(id, doc);
+        this.linkNode(doc);
+        if (!this.entryPoint)
+            this.entryPoint = id;
+        await this.persistShard(doc.shard);
+    }
+    /** Approximate top-K nearest neighbors by cosine similarity. */
+    async search(query, topK = 10) {
+        await this.init();
+        if (this.docs.size === 0 || !this.entryPoint)
+            return [];
+        const qVec = await this.embeddings.embed(query);
+        const candidates = this.greedySearch(qVec, Math.max(topK, this.efSearch));
+        const hits = [];
+        for (const c of candidates.slice(0, topK)) {
+            const doc = this.docs.get(c.id);
+            if (!doc)
+                continue;
+            hits.push({ id: c.id, score: c.score, text: doc.text, metadata: doc.metadata });
+        }
+        return hits;
+    }
+    /** Remove a document from the index. */
+    async delete(id) {
+        await this.init();
+        const doc = this.docs.get(id);
+        if (!doc)
+            return false;
+        this.detachNode(id);
+        this.docs.delete(id);
+        if (this.entryPoint === id)
+            this.entryPoint = this.docs.keys().next().value ?? null;
+        await this.persistShard(doc.shard);
+        return true;
+    }
+    count() { return this.docs.size; }
+    stats() {
+        const neighborSum = Array.from(this.docs.values()).reduce((s, d) => s + d.neighbors.length, 0);
+        const shards = new Set(Array.from(this.docs.values()).map(d => d.shard)).size;
+        return {
+            count: this.docs.size,
+            shards,
+            avgNeighbors: this.docs.size ? +(neighborSum / this.docs.size).toFixed(2) : 0,
+            ollamaModel: this.embeddings.ollamaModel ?? null,
+            ollamaPullState: this.pullState,
+            approxBytes: this.approxBytes(),
+        };
+    }
+    async flush() {
+        const dirtyShards = new Set(Array.from(this.docs.values()).map(d => d.shard));
+        for (const s of dirtyShards)
+            await this.persistShard(s);
+    }
+    // -- Index core ----------------------------------------------------------
+    linkNode(doc) {
+        if (!this.entryPoint || this.docs.size === 1)
+            return;
+        const candidates = this.greedySearch(doc.vector, this.efConstruct);
+        const selected = candidates.slice(0, this.M);
+        doc.neighbors = selected.map(c => c.id);
+        for (const c of selected) {
+            const peer = this.docs.get(c.id);
+            if (!peer)
+                continue;
+            if (!peer.neighbors.includes(doc.id)) {
+                peer.neighbors.push(doc.id);
+                // Cap peer fan-out so the graph stays small-world. Keep the M nearest.
+                if (peer.neighbors.length > this.M * 2) {
+                    const scored = peer.neighbors
+                        .map(nid => ({ id: nid, score: this.dotById(peer.vector, nid) }))
+                        .sort((a, b) => b.score - a.score)
+                        .slice(0, this.M * 2);
+                    peer.neighbors = scored.map(s => s.id);
+                }
+            }
+        }
+    }
+    detachNode(id) {
+        const doc = this.docs.get(id);
+        if (!doc)
+            return;
+        for (const peerId of doc.neighbors) {
+            const peer = this.docs.get(peerId);
+            if (!peer)
+                continue;
+            peer.neighbors = peer.neighbors.filter(n => n !== id);
+        }
+    }
+    greedySearch(query, ef) {
+        const visited = new Set();
+        const start = this.entryPoint;
+        const startDoc = this.docs.get(start);
+        if (!startDoc)
+            return [];
+        const frontier = [
+            { id: start, score: dot(query, startDoc.vector) },
+        ];
+        const best = [...frontier];
+        visited.add(start);
+        while (frontier.length) {
+            frontier.sort((a, b) => b.score - a.score);
+            const current = frontier.shift();
+            // Stop if our worst kept best is still better than this candidate.
+            if (best.length >= ef && current.score < best[best.length - 1].score)
+                break;
+            const doc = this.docs.get(current.id);
+            if (!doc)
+                continue;
+            for (const nid of doc.neighbors) {
+                if (visited.has(nid))
+                    continue;
+                visited.add(nid);
+                const peer = this.docs.get(nid);
+                if (!peer)
+                    continue;
+                const s = dot(query, peer.vector);
+                frontier.push({ id: nid, score: s });
+                best.push({ id: nid, score: s });
+                best.sort((a, b) => b.score - a.score);
+                if (best.length > ef)
+                    best.pop();
+            }
+        }
+        return best;
+    }
+    dotById(query, id) {
+        const doc = this.docs.get(id);
+        return doc ? dot(query, doc.vector) : -Infinity;
+    }
+    // -- Persistence ---------------------------------------------------------
+    loadShards() {
+        const files = fs.existsSync(INDEX_DIR)
+            ? fs.readdirSync(INDEX_DIR).filter(f => f.startsWith(SHARD_PREFIX) && f.endsWith('.json'))
+            : [];
+        for (const file of files) {
+            try {
+                const raw = fs.readFileSync(path.join(INDEX_DIR, file), 'utf-8');
+                const payload = JSON.parse(raw);
+                for (const d of payload.docs ?? []) {
+                    this.docs.set(d.id, { ...d, shard: payload.shard });
+                }
+                this.nextShard = Math.max(this.nextShard, payload.shard + 1);
+            }
+            catch { /* skip corrupt shard */ }
+        }
+        this.entryPoint = this.docs.keys().next().value ?? null;
+        this.currentShardBytes = this.shardBytes(Math.max(0, this.nextShard - 1));
+    }
+    pickShardFor(text) {
+        const approx = text.length * 4 + 256; // text bytes + vector + neighbors overhead
+        if (this.currentShardBytes + approx > SHARD_MAX_BYTES) {
+            this.nextShard = Math.max(this.nextShard, this.shardCount());
+            this.currentShardBytes = 0;
+            return this.nextShard++;
+        }
+        this.currentShardBytes += approx;
+        return Math.max(0, this.nextShard - 1);
+    }
+    shardCount() {
+        return new Set(Array.from(this.docs.values()).map(d => d.shard)).size;
+    }
+    async persistShard(shard) {
+        try {
+            const docs = Array.from(this.docs.values()).filter(d => d.shard === shard);
+            const payload = {
+                schemaVersion: 1,
+                shard,
+                docs: docs.map(({ shard: _s, ...rest }) => rest),
+            };
+            const file = path.join(INDEX_DIR, `${SHARD_PREFIX}${shard}.json`);
+            const tmp = file + '.tmp';
+            fs.writeFileSync(tmp, JSON.stringify(payload));
+            fs.renameSync(tmp, file);
+        }
+        catch { /* non-fatal */ }
+    }
+    shardBytes(shard) {
+        try {
+            const file = path.join(INDEX_DIR, `${SHARD_PREFIX}${shard}.json`);
+            return fs.existsSync(file) ? fs.statSync(file).size : 0;
+        }
+        catch {
+            return 0;
+        }
+    }
+    approxBytes() {
+        let total = 0;
+        if (!fs.existsSync(INDEX_DIR))
+            return 0;
+        for (const f of fs.readdirSync(INDEX_DIR)) {
+            if (!f.startsWith(SHARD_PREFIX))
+                continue;
+            try {
+                total += fs.statSync(path.join(INDEX_DIR, f)).size;
+            }
+            catch { /* skip */ }
+        }
+        return total;
+    }
+    // -- Ollama auto-pull ----------------------------------------------------
+    async maybeAutoPull() {
+        const emb = this.embeddings;
+        if (emb.ollamaModel)
+            return; // already have a model
+        const baseUrl = emb.ollamaBaseUrl ?? 'http://127.0.0.1:11434';
+        try {
+            const probe = await fetch(baseUrl + '/api/tags', { signal: AbortSignal.timeout(2000) });
+            if (!probe.ok)
+                return; // no Ollama, stay on hashing fallback
+        }
+        catch {
+            return;
+        }
+        this.pullState = 'pulling';
+        this.emit('pull-progress', { model: PULL_MODEL, status: 'starting', percent: 0 });
+        try {
+            const res = await fetch(baseUrl + '/api/pull', {
+                method: 'POST',
+                headers: { 'Content-Type': 'application/json' },
+                body: JSON.stringify({ name: PULL_MODEL, stream: true }),
+            });
+            if (!res.ok || !res.body)
+                throw new Error(`pull failed: ${res.status}`);
+            const reader = res.body.getReader();
+            const decoder = new TextDecoder();
+            let buf = '';
+            while (true) {
+                const { value, done } = await reader.read();
+                if (done)
+                    break;
+                buf += decoder.decode(value, { stream: true });
+                const lines = buf.split('\n');
+                buf = lines.pop() ?? '';
+                for (const line of lines) {
+                    if (!line.trim())
+                        continue;
+                    try {
+                        const obj = JSON.parse(line);
+                        const percent = obj.total && obj.completed ? +(obj.completed / obj.total * 100).toFixed(1) : 0;
+                        this.emit('pull-progress', { model: PULL_MODEL, status: obj.status ?? 'pulling', percent });
+                    }
+                    catch { /* skip non-JSON line */ }
+                }
+            }
+            this.pullState = 'complete';
+            this.emit('pull-complete', { model: PULL_MODEL });
+        }
+        catch (err) {
+            this.pullState = 'failed';
+            this.emit('pull-error', err);
+        }
+    }
+}
+function dot(a, b) {
+    let d = 0;
+    const n = Math.min(a.length, b.length);
+    for (let i = 0; i < n; i++)
+        d += a[i] * b[i];
+    return d;
+}
+let _instance = null;
+export function getEmbeddingsV2() {
+    if (!_instance)
+        _instance = new EmbeddingsV2();
+    return _instance;
+}
+export function resetEmbeddingsV2ForTests() { _instance = null; }
+//# sourceMappingURL=embeddings-v2.js.map

package/dist/brain/embeddings-v2.js.map

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package/dist/brain/embeddings.d.ts

@@ -0,0 +1,27 @@
+export declare class Embeddings {
+    private cache;
+    private ollamaModel;
+    private ollamaBaseUrl;
+    private initialized;
+    init(): Promise<void>;
+    /** Embed a string — returns a unit-norm vector. Uses cache when available. */
+    embed(text: string): Promise<number[]>;
+    /** Cosine similarity between two same-length vectors (L2-normalized assumed). */
+    static cosine(a: number[], b: number[]): number;
+    /** Rank candidates by cosine similarity to the query embedding. */
+    semanticSearch(query: string, candidates: Array<{
+        id: string;
+        text: string;
+    }>, topK?: number): Promise<Array<{
+        id: string;
+        score: number;
+    }>>;
+    flush(): Promise<void>;
+    private embedOllama;
+    /** Zero-dep local embedding: char tri-grams → hashed bag → dim 128 → TF weighting → L2 normalize. */
+    private embedLocal;
+    private persist;
+}
+export declare function getEmbeddings(): Embeddings;
+export declare function resetEmbeddingsForTests(): void;
+//# sourceMappingURL=embeddings.d.ts.map

package/dist/brain/embeddings.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"embeddings.d.ts","sourceRoot":"","sources":["../../src/brain/embeddings.ts"],"names":[],"mappings":"AAqBA,qBAAa,UAAU;IACrB,OAAO,CAAC,KAAK,CAAoC;IACjD,OAAO,CAAC,WAAW,CAAuB;IAC1C,OAAO,CAAC,aAAa,CAAoC;IACzD,OAAO,CAAC,WAAW,CAAS;IAEtB,IAAI,IAAI,OAAO,CAAC,IAAI,CAAC;IAgC3B,8EAA8E;IACxE,KAAK,CAAC,IAAI,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,EAAE,CAAC;IAe5C,iFAAiF;IACjF,MAAM,CAAC,MAAM,CAAC,CAAC,EAAE,MAAM,EAAE,EAAE,CAAC,EAAE,MAAM,EAAE,GAAG,MAAM;IAO/C,mEAAmE;IAC7D,cAAc,CAAC,KAAK,EAAE,MAAM,EAAE,UAAU,EAAE,KAAK,CAAC;QAAE,EAAE,EAAE,MAAM,CAAC;QAAC,IAAI,EAAE,MAAM,CAAA;KAAE,CAAC,EAAE,IAAI,SAAK,GAAG,OAAO,CAAC,KAAK,CAAC;QAAE,EAAE,EAAE,MAAM,CAAC;QAAC,KAAK,EAAE,MAAM,CAAA;KAAE,CAAC,CAAC;IAYxI,KAAK,IAAI,OAAO,CAAC,IAAI,CAAC;YAId,WAAW;IAezB,qGAAqG;IACrG,OAAO,CAAC,UAAU;YAqBJ,OAAO;CAYtB;AAeD,wBAAgB,aAAa,IAAI,UAAU,CAG1C;AACD,wBAAgB,uBAAuB,IAAI,IAAI,CAAsB"}

package/dist/brain/embeddings.js

@@ -0,0 +1,175 @@
+// src/brain/embeddings.ts — Lightweight embeddings + semantic search
+// v6.0.0 — Hive Mind Edition
+//
+// Uses a local hashing-based embedding (tfidf + char n-grams) for zero-dep
+// semantic recall. If Ollama is available with an embedding model
+// (nomic-embed-text, mxbai-embed-large, all-minilm), upgrades to real
+// dense embeddings automatically.
+//
+// Exposed: embed(text), cosineSim(a,b), semanticSearch(query, candidates)
+import * as fs from 'fs';
+import * as path from 'path';
+import * as os from 'os';
+import { getModelRegistry } from './model-registry.js';
+const CACHE_DIR = path.join(os.homedir(), '.shadow-brain', 'embeddings');
+const CACHE_PATH = path.join(CACHE_DIR, 'vectors.json');
+const EMB_DIM = 128;
+export class Embeddings {
+    constructor() {
+        this.cache = new Map();
+        this.ollamaModel = null;
+        this.ollamaBaseUrl = 'http://127.0.0.1:11434';
+        this.initialized = false;
+    }
+    async init() {
+        if (this.initialized)
+            return;
+        fs.mkdirSync(CACHE_DIR, { recursive: true });
+        if (fs.existsSync(CACHE_PATH)) {
+            try {
+                const parsed = JSON.parse(fs.readFileSync(CACHE_PATH, 'utf-8'));
+                for (const [k, v] of Object.entries(parsed.vectors ?? {}))
+                    this.cache.set(k, v);
+            }
+            catch { /* skip */ }
+        }
+        // Probe for Ollama embedding model
+        try {
+            const reg = getModelRegistry();
+            await reg.init();
+            const ollama = reg.getProvider('ollama');
+            if (ollama?.enabled) {
+                this.ollamaBaseUrl = ollama.baseUrl;
+                const res = await fetch(this.ollamaBaseUrl + '/api/tags', { signal: AbortSignal.timeout(2000) });
+                if (res.ok) {
+                    const json = await res.json();
+                    const preferred = ['nomic-embed-text', 'mxbai-embed-large', 'all-minilm'];
+                    for (const pref of preferred) {
+                        const match = json.models?.find(m => m.name.startsWith(pref));
+                        if (match) {
+                            this.ollamaModel = match.name;
+                            break;
+                        }
+                    }
+                }
+            }
+        }
+        catch { /* no ollama */ }
+        this.initialized = true;
+    }
+    /** Embed a string — returns a unit-norm vector. Uses cache when available. */
+    async embed(text) {
+        await this.init();
+        const trimmed = (text || '').slice(0, 8000);
+        const cached = this.cache.get(trimmed);
+        if (cached)
+            return cached;
+        let vec = null;
+        if (this.ollamaModel)
+            vec = await this.embedOllama(trimmed).catch(() => null);
+        if (!vec)
+            vec = this.embedLocal(trimmed);
+        this.cache.set(trimmed, vec);
+        if (this.cache.size % 25 === 0)
+            this.persist().catch(() => { });
+        return vec;
+    }
+    /** Cosine similarity between two same-length vectors (L2-normalized assumed). */
+    static cosine(a, b) {
+        let dot = 0;
+        const n = Math.min(a.length, b.length);
+        for (let i = 0; i < n; i++)
+            dot += a[i] * b[i];
+        return dot;
+    }
+    /** Rank candidates by cosine similarity to the query embedding. */
+    async semanticSearch(query, candidates, topK = 20) {
+        await this.init();
+        const q = await this.embed(query);
+        const scored = [];
+        for (const c of candidates) {
+            const v = await this.embed(c.text);
+            scored.push({ id: c.id, score: Embeddings.cosine(q, v) });
+        }
+        scored.sort((a, b) => b.score - a.score);
+        return scored.slice(0, topK);
+    }
+    async flush() { await this.persist(); }
+    // ── Internals ─────────────────────────────────────────────────────────
+    async embedOllama(text) {
+        try {
+            const res = await fetch(this.ollamaBaseUrl + '/api/embeddings', {
+                method: 'POST', headers: { 'Content-Type': 'application/json' },
+                body: JSON.stringify({ model: this.ollamaModel, prompt: text }),
+                signal: AbortSignal.timeout(30000),
+            });
+            if (!res.ok)
+                return null;
+            const json = await res.json();
+            if (!json.embedding || !json.embedding.length)
+                return null;
+            // L2 normalize
+            return normalize(json.embedding);
+        }
+        catch {
+            return null;
+        }
+    }
+    /** Zero-dep local embedding: char tri-grams → hashed bag → dim 128 → TF weighting → L2 normalize. */
+    embedLocal(text) {
+        const vec = new Array(EMB_DIM).fill(0);
+        const norm = text.toLowerCase().replace(/[^a-z0-9\s]/g, ' ');
+        // word unigrams
+        const tokens = norm.split(/\s+/).filter(t => t.length > 1);
+        const stopwords = new Set(['the', 'a', 'an', 'and', 'or', 'of', 'to', 'for', 'in', 'on', 'is', 'it', 'this', 'that', 'as', 'by', 'be', 'do']);
+        for (const t of tokens) {
+            if (stopwords.has(t))
+                continue;
+            const h = hash32(t) % EMB_DIM;
+            vec[h] += 1 + Math.log(t.length);
+        }
+        // char tri-grams for fuzzy matching
+        for (let i = 0; i <= norm.length - 3; i++) {
+            const tri = norm.slice(i, i + 3);
+            if (!/\S/.test(tri))
+                continue;
+            const h = (hash32(tri) * 17) % EMB_DIM;
+            vec[h] += 0.3;
+        }
+        return normalize(vec);
+    }
+    async persist() {
+        try {
+            const shape = {
+                schemaVersion: 1,
+                vectors: Object.fromEntries(this.cache.entries()),
+                lastProvider: this.ollamaModel ? 'ollama' : 'local',
+            };
+            const tmp = CACHE_PATH + '.tmp';
+            fs.writeFileSync(tmp, JSON.stringify(shape));
+            fs.renameSync(tmp, CACHE_PATH);
+        }
+        catch { /* non-fatal */ }
+    }
+}
+function hash32(s) {
+    let h = 2166136261;
+    for (let i = 0; i < s.length; i++)
+        h = Math.imul(h ^ s.charCodeAt(i), 16777619);
+    return h >>> 0;
+}
+function normalize(v) {
+    let n = 0;
+    for (const x of v)
+        n += x * x;
+    n = Math.sqrt(n) || 1;
+    return v.map(x => x / n);
+}
+let _instance = null;
+export function getEmbeddings() {
+    if (!_instance)
+        _instance = new Embeddings();
+    return _instance;
+}
+export function resetEmbeddingsForTests() { _instance = null; }
+//# sourceMappingURL=embeddings.js.map

package/dist/brain/embeddings.js.map

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package/dist/brain/forgetting-curve.d.ts

@@ -0,0 +1,21 @@
+import { ConsolidationReport, ForgettingState, MemoryTier } from '../types.js';
+export declare class ForgettingCurve {
+    private states;
+    private reports;
+    private cycleCount;
+    private initialized;
+    init(): Promise<void>;
+    track(memoryId: string, initialStrength?: number, consolidatedTier?: MemoryTier): Promise<ForgettingState>;
+    reinforce(memoryId: string, strengthBoost?: number): Promise<ForgettingState | null>;
+    /** Run a consolidation sleep cycle. Returns a report of changes. */
+    runConsolidation(): Promise<ConsolidationReport>;
+    getState(memoryId: string): ForgettingState | null;
+    listStates(limit?: number): ForgettingState[];
+    listReports(limit?: number): ConsolidationReport[];
+    private tierForStrength;
+    private tierRank;
+    private persist;
+}
+export declare function getForgettingCurve(): ForgettingCurve;
+export declare function resetForgettingCurveForTests(): void;
+//# sourceMappingURL=forgetting-curve.d.ts.map

package/dist/brain/forgetting-curve.d.ts.map

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