@stupidloud/codegraph 0.7.20 → 0.9.5

package/dist/sync/watcher.js

@@ -47,6 +47,7 @@ const fs = __importStar(require("fs"));
 const extraction_1 = require("../extraction");
 const errors_1 = require("../errors");
 const utils_1 = require("../utils");
+const watch_policy_1 = require("./watch-policy");
 /**
  * FileWatcher monitors a project directory for changes and triggers
  * debounced sync operations via a provided callback.
@@ -54,7 +55,7 @@ const utils_1 = require("../utils");
  * Design goals:
  * - Minimal resource usage (native OS file events, no polling)
  * - Debounced to avoid thrashing on rapid saves
- * - Filters against CodeGraph include/exclude patterns
+ * - Filters to supported source files by extension
  * - Ignores .codegraph/ directory changes
  */
 class FileWatcher {
@@ -64,14 +65,12 @@ class FileWatcher {
     syncing = false;
     stopped = false;
     projectRoot;
-    config;
     debounceMs;
     syncFn;
     onSyncComplete;
     onSyncError;
-    constructor(projectRoot, config, syncFn, options = {}) {
+    constructor(projectRoot, syncFn, options = {}) {
         this.projectRoot = projectRoot;
-        this.config = config;
         this.syncFn = syncFn;
         this.debounceMs = options.debounceMs ?? 2000;
         this.onSyncComplete = options.onSyncComplete;
@@ -85,6 +84,15 @@ class FileWatcher {
         if (this.watcher)
             return true; // Already watching
         this.stopped = false;
+        // Some environments make recursive fs.watch unusable — most notably WSL2
+        // /mnt/ drives, where setup blocks long enough to break MCP startup
+        // handshakes (issue #199). Skip watching there; callers fall back to
+        // manual `codegraph sync` or the git sync hooks.
+        const disabledReason = (0, watch_policy_1.watchDisabledReason)(this.projectRoot);
+        if (disabledReason) {
+            (0, errors_1.logDebug)('File watcher disabled', { reason: disabledReason, projectRoot: this.projectRoot });
+            return false;
+        }
         try {
             this.watcher = fs.watch(this.projectRoot, { recursive: true }, (_eventType, filename) => {
                 if (!filename || this.stopped)
@@ -97,8 +105,8 @@ class FileWatcher {
                     normalized.startsWith('.codegraph\\')) {
                     return;
                 }
-                // Filter against include/exclude patterns
-                if (!(0, extraction_1.shouldIncludeFile)(normalized, this.config)) {
+                // Only sync changes to files we can actually parse.
+                if (!(0, extraction_1.isSourceFile)(normalized)) {
                     return;
                 }
                 (0, errors_1.logDebug)('File change detected', { file: normalized });

package/dist/sync/watcher.js.map

@@ -1 +1 @@
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+{"version":3,"file":"watcher.js","sourceRoot":"","sources":["../../src/sync/watcher.ts"],"names":[],"mappings":";AAAA;;;;;;;;GAQG;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAEH,uCAAyB;AACzB,8CAA6C;AAC7C,sCAA8C;AAC9C,oCAAyC;AACzC,iDAAqD;AAwBrD;;;;;;;;;GASG;AACH,MAAa,WAAW;IACd,OAAO,GAAwB,IAAI,CAAC;IACpC,aAAa,GAAyC,IAAI,CAAC;IAC3D,UAAU,GAAG,KAAK,CAAC;IACnB,OAAO,GAAG,KAAK,CAAC;IAChB,OAAO,GAAG,KAAK,CAAC;IAEP,WAAW,CAAS;IACpB,UAAU,CAAS;IACnB,MAAM,CAA8D;IACpE,cAAc,CAAkC;IAChD,WAAW,CAA+B;IAE3D,YACE,WAAmB,EACnB,MAAmE,EACnE,UAAwB,EAAE;QAE1B,IAAI,CAAC,WAAW,GAAG,WAAW,CAAC;QAC/B,IAAI,CAAC,MAAM,GAAG,MAAM,CAAC;QACrB,IAAI,CAAC,UAAU,GAAG,OAAO,CAAC,UAAU,IAAI,IAAI,CAAC;QAC7C,IAAI,CAAC,cAAc,GAAG,OAAO,CAAC,cAAc,CAAC;QAC7C,IAAI,CAAC,WAAW,GAAG,OAAO,CAAC,WAAW,CAAC;IACzC,CAAC;IAED;;;OAGG;IACH,KAAK;QACH,IAAI,IAAI,CAAC,OAAO;YAAE,OAAO,IAAI,CAAC,CAAC,mBAAmB;QAClD,IAAI,CAAC,OAAO,GAAG,KAAK,CAAC;QAErB,yEAAyE;QACzE,oEAAoE;QACpE,qEAAqE;QACrE,iDAAiD;QACjD,MAAM,cAAc,GAAG,IAAA,kCAAmB,EAAC,IAAI,CAAC,WAAW,CAAC,CAAC;QAC7D,IAAI,cAAc,EAAE,CAAC;YACnB,IAAA,iBAAQ,EAAC,uBAAuB,EAAE,EAAE,MAAM,EAAE,cAAc,EAAE,WAAW,EAAE,IAAI,CAAC,WAAW,EAAE,CAAC,CAAC;YAC7F,OAAO,KAAK,CAAC;QACf,CAAC;QAED,IAAI,CAAC;YACH,IAAI,CAAC,OAAO,GAAG,EAAE,CAAC,KAAK,CACrB,IAAI,CAAC,WAAW,EAChB,EAAE,SAAS,EAAE,IAAI,EAAE,EACnB,CAAC,UAAU,EAAE,QAAQ,EAAE,EAAE;gBACvB,IAAI,CAAC,QAAQ,IAAI,IAAI,CAAC,OAAO;oBAAE,OAAO;gBAEtC,4BAA4B;gBAC5B,MAAM,UAAU,GAAG,IAAA,qBAAa,EAAC,QAAQ,CAAC,CAAC;gBAE3C,2DAA2D;gBAC3D,IACE,UAAU,KAAK,YAAY;oBAC3B,UAAU,CAAC,UAAU,CAAC,aAAa,CAAC;oBACpC,UAAU,CAAC,UAAU,CAAC,cAAc,CAAC,EACrC,CAAC;oBACD,OAAO;gBACT,CAAC;gBAED,oDAAoD;gBACpD,IAAI,CAAC,IAAA,yBAAY,EAAC,UAAU,CAAC,EAAE,CAAC;oBAC9B,OAAO;gBACT,CAAC;gBAED,IAAA,iBAAQ,EAAC,sBAAsB,EAAE,EAAE,IAAI,EAAE,UAAU,EAAE,CAAC,CAAC;gBACvD,IAAI,CAAC,UAAU,GAAG,IAAI,CAAC;gBACvB,IAAI,CAAC,YAAY,EAAE,CAAC;YACtB,CAAC,CACF,CAAC;YAEF,mCAAmC;YACnC,IAAI,CAAC,OAAO,CAAC,EAAE,CAAC,OAAO,EAAE,CAAC,GAAG,EAAE,EAAE;gBAC/B,IAAA,gBAAO,EAAC,oBAAoB,EAAE,EAAE,KAAK,EAAE,MAAM,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC;gBACtD,wDAAwD;YAC1D,CAAC,CAAC,CAAC;YAEH,IAAA,iBAAQ,EAAC,sBAAsB,EAAE,EAAE,WAAW,EAAE,IAAI,CAAC,WAAW,EAAE,UAAU,EAAE,IAAI,CAAC,UAAU,EAAE,CAAC,CAAC;YACjG,OAAO,IAAI,CAAC;QACd,CAAC;QAAC,OAAO,GAAG,EAAE,CAAC;YACb,wDAAwD;YACxD,IAAA,gBAAO,EAAC,kFAAkF,EAAE,EAAE,KAAK,EAAE,MAAM,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC;YACpH,OAAO,KAAK,CAAC;QACf,CAAC;IACH,CAAC;IAED;;OAEG;IACH,IAAI;QACF,IAAI,CAAC,OAAO,GAAG,IAAI,CAAC;QAEpB,IAAI,IAAI,CAAC,aAAa,EAAE,CAAC;YACvB,YAAY,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC;YACjC,IAAI,CAAC,aAAa,GAAG,IAAI,CAAC;QAC5B,CAAC;QAED,IAAI,IAAI,CAAC,OAAO,EAAE,CAAC;YACjB,IAAI,CAAC,OAAO,CAAC,KAAK,EAAE,CAAC;YACrB,IAAI,CAAC,OAAO,GAAG,IAAI,CAAC;QACtB,CAAC;QAED,IAAI,CAAC,UAAU,GAAG,KAAK,CAAC;QACxB,IAAA,iBAAQ,EAAC,sBAAsB,CAAC,CAAC;IACnC,CAAC;IAED;;OAEG;IACH,QAAQ;QACN,OAAO,IAAI,CAAC,OAAO,KAAK,IAAI,IAAI,CAAC,IAAI,CAAC,OAAO,CAAC;IAChD,CAAC;IAED;;OAEG;IACK,YAAY;QAClB,IAAI,IAAI,CAAC,aAAa,EAAE,CAAC;YACvB,YAAY,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC;QACnC,CAAC;QACD,IAAI,CAAC,aAAa,GAAG,UAAU,CAAC,GAAG,EAAE;YACnC,IAAI,CAAC,aAAa,GAAG,IAAI,CAAC;YAC1B,IAAI,CAAC,KAAK,EAAE,CAAC;QACf,CAAC,EAAE,IAAI,CAAC,UAAU,CAAC,CAAC;IACtB,CAAC;IAED;;OAEG;IACK,KAAK,CAAC,KAAK;QACjB,0DAA0D;QAC1D,IAAI,IAAI,CAAC,OAAO,IAAI,IAAI,CAAC,OAAO;YAAE,OAAO;QAEzC,IAAI,CAAC,UAAU,GAAG,KAAK,CAAC;QACxB,IAAI,CAAC,OAAO,GAAG,IAAI,CAAC;QAEpB,IAAI,CAAC;YACH,MAAM,MAAM,GAAG,MAAM,IAAI,CAAC,MAAM,EAAE,CAAC;YACnC,IAAI,CAAC,cAAc,EAAE,CAAC,MAAM,CAAC,CAAC;QAChC,CAAC;QAAC,OAAO,GAAG,EAAE,CAAC;YACb,MAAM,KAAK,GAAG,GAAG,YAAY,KAAK,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,KAAK,CAAC,MAAM,CAAC,GAAG,CAAC,CAAC,CAAC;YAClE,IAAA,gBAAO,EAAC,mBAAmB,EAAE,EAAE,KAAK,EAAE,KAAK,CAAC,OAAO,EAAE,CAAC,CAAC;YACvD,IAAI,CAAC,WAAW,EAAE,CAAC,KAAK,CAAC,CAAC;QAC5B,CAAC;gBAAS,CAAC;YACT,IAAI,CAAC,OAAO,GAAG,KAAK,CAAC;YAErB,uDAAuD;YACvD,IAAI,IAAI,CAAC,UAAU,IAAI,CAAC,IAAI,CAAC,OAAO,EAAE,CAAC;gBACrC,IAAI,CAAC,YAAY,EAAE,CAAC;YACtB,CAAC;QACH,CAAC;IACH,CAAC;CACF;AA1JD,kCA0JC"}

package/dist/types.d.ts

@@ -20,7 +20,7 @@ export type EdgeKind = 'contains' | 'calls' | 'imports' | 'exports' | 'extends'
  * Supported programming languages. See NODE_KINDS for why this is a
  * runtime-iterable const array.
  */
-export declare const LANGUAGES: readonly ["typescript", "javascript", "tsx", "jsx", "python", "go", "rust", "java", "c", "cpp", "csharp", "php", "ruby", "swift", "kotlin", "dart", "svelte", "vue", "liquid", "pascal", "scala", "unknown"];
+export declare const LANGUAGES: readonly ["typescript", "javascript", "tsx", "jsx", "python", "go", "rust", "java", "c", "cpp", "csharp", "php", "ruby", "swift", "kotlin", "dart", "svelte", "vue", "liquid", "pascal", "scala", "lua", "luau", "yaml", "twig", "unknown"];
 export type Language = (typeof LANGUAGES)[number];
 /**
  * A node in the knowledge graph representing a code symbol

package/dist/types.d.ts.map

@@ -1 +1 @@
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package/dist/types.js

@@ -66,6 +66,10 @@ exports.LANGUAGES = [
     'liquid',
     'pascal',
     'scala',
+    'lua',
+    'luau',
+    'yaml',
+    'twig',
     'unknown',
 ];
 /**
@@ -124,6 +128,13 @@ exports.DEFAULT_CONFIG = {
         // Scala
         '**/*.scala',
         '**/*.sc',
+        // Lua / Luau
+        '**/*.lua',
+        '**/*.luau',
+        // Drupal config/templates
+        '**/*.yml',
+        '**/*.yaml',
+        '**/*.twig',
     ],
     exclude: [
         // Version control

package/dist/types.js.map

@@ -1 +1 @@
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+{"version":3,"file":"types.js","sourceRoot":"","sources":["../src/types.ts"],"names":[],"mappings":";AAAA;;;;GAIG;;;AAEH,gFAAgF;AAChF,cAAc;AACd,gFAAgF;AAEhF;;;;;;GAMG;AACU,QAAA,UAAU,GAAG;IACxB,MAAM;IACN,QAAQ;IACR,OAAO;IACP,QAAQ;IACR,WAAW;IACX,OAAO;IACP,UAAU;IACV,UAAU;IACV,QAAQ;IACR,UAAU;IACV,OAAO;IACP,UAAU;IACV,UAAU;IACV,MAAM;IACN,aAAa;IACb,YAAY;IACZ,WAAW;IACX,WAAW;IACX,QAAQ;IACR,QAAQ;IACR,OAAO;IACP,WAAW;CACH,CAAC;AAqBX;;;GAGG;AACU,QAAA,SAAS,GAAG;IACvB,YAAY;IACZ,YAAY;IACZ,KAAK;IACL,KAAK;IACL,QAAQ;IACR,IAAI;IACJ,MAAM;IACN,MAAM;IACN,GAAG;IACH,KAAK;IACL,QAAQ;IACR,KAAK;IACL,MAAM;IACN,OAAO;IACP,QAAQ;IACR,MAAM;IACN,QAAQ;IACR,KAAK;IACL,QAAQ;IACR,QAAQ;IACR,OAAO;IACP,KAAK;IACL,MAAM;IACN,MAAM;IACN,MAAM;IACN,SAAS;CACD,CAAC;AA4aX;;GAEG;AACU,QAAA,cAAc,GAAoB;IAC7C,OAAO,EAAE,CAAC;IACV,OAAO,EAAE,GAAG;IACZ,OAAO,EAAE;QACP,wBAAwB;QACxB,SAAS;QACT,UAAU;QACV,SAAS;QACT,UAAU;QACV,SAAS;QACT,SAAS;QACT,KAAK;QACL,SAAS;QACT,OAAO;QACP,SAAS;QACT,OAAO;QACP,WAAW;QACX,QAAQ;QACR,QAAQ;QACR,QAAQ;QACR,UAAU;QACV,UAAU;QACV,SAAS;QACT,UAAU;QACV,KAAK;QACL,SAAS;QACT,MAAM;QACN,UAAU;QACV,OAAO;QACP,SAAS;QACT,QAAQ;QACR,YAAY;QACZ,SAAS;QACT,SAAS;QACT,UAAU;QACV,OAAO;QACP,WAAW;QACX,SAAS;QACT,aAAa;QACb,MAAM;QACN,UAAU;QACV,0BAA0B;QAC1B,aAAa;QACb,kBAAkB;QAClB,UAAU;QACV,UAAU;QACV,UAAU;QACV,UAAU;QACV,UAAU;QACV,UAAU;QACV,QAAQ;QACR,YAAY;QACZ,SAAS;QACT,aAAa;QACb,UAAU;QACV,WAAW;QACX,0BAA0B;QAC1B,UAAU;QACV,WAAW;QACX,WAAW;KACZ;IACD,OAAO,EAAE;QACP,kBAAkB;QAClB,YAAY;QAEZ,eAAe;QACf,oBAAoB;QACpB,cAAc;QACd,YAAY;QAEZ,wBAAwB;QACxB,YAAY;QACZ,aAAa;QACb,WAAW;QACX,WAAW;QACX,WAAW;QACX,cAAc;QAEd,wBAAwB;QACxB,aAAa;QACb,gBAAgB;QAChB,aAAa;QACb,aAAa;QACb,mBAAmB;QACnB,eAAe;QACf,cAAc;QACd,cAAc;QACd,qBAAqB;QACrB,aAAa;QACb,cAAc;QACd,mBAAmB;QACnB,eAAe;QACf,gBAAgB;QAChB,WAAW;QACX,mBAAmB;QACnB,mBAAmB;QACnB,wBAAwB;QAExB,sBAAsB;QACtB,aAAa;QACb,iBAAiB;QACjB,gBAAgB;QAChB,iBAAiB;QACjB,qBAAqB;QACrB,uBAAuB;QAEvB,SAAS;QACT,mBAAmB;QACnB,aAAa;QACb,YAAY;QACZ,qBAAqB;QACrB,qBAAqB;QACrB,qBAAqB;QACrB,mBAAmB;QACnB,mBAAmB;QACnB,YAAY;QACZ,YAAY;QACZ,kBAAkB;QAClB,aAAa;QAEb,KAAK;QACL,kBAAkB;QAElB,OAAO;QACP,oBAAoB;QACpB,sBAAsB;QAEtB,qBAAqB;QACrB,eAAe;QACf,WAAW;QACX,yBAAyB;QACzB,eAAe;QAEf,eAAe;QACf,kBAAkB;QAElB,UAAU;QACV,WAAW;QACX,cAAc;QACd,iBAAiB;QACjB,eAAe;QAEf,QAAQ;QACR,qBAAqB;QACrB,kBAAkB;QAClB,eAAe;QACf,uBAAuB;QACvB,cAAc;QACd,aAAa;QACb,eAAe;QACf,WAAW;QACX,YAAY,EAAG,8DAA8D;QAE7E,WAAW;QACX,eAAe;QACf,aAAa;QACb,WAAW;QAEX,kBAAkB;QAClB,mBAAmB;QACnB,cAAc;QACd,gBAAgB;QAChB,kBAAkB;QAClB,sBAAsB;QACtB,sBAAsB;QAEtB,gBAAgB;QAChB,iBAAiB;QACjB,kBAAkB;QAClB,UAAU;QAEV,MAAM;QACN,iBAAiB;QACjB,yBAAyB;QACzB,uBAAuB;QAEvB,OAAO;QACP,eAAe;QACf,iBAAiB;QACjB,qBAAqB;QACrB,oBAAoB;QACpB,eAAe;QAEf,mBAAmB;QACnB,gBAAgB;QAChB,eAAe;QACf,mBAAmB;QACnB,oBAAoB;QACpB,iBAAiB;QAEjB,aAAa;QACb,aAAa;QAEb,gBAAgB;QAChB,YAAY;QACZ,WAAW;QACX,YAAY;QAEZ,6BAA6B;QAC7B,cAAc;QACd,mBAAmB;QACnB,YAAY;KACb;IACD,SAAS,EAAE,EAAE;IACb,UAAU,EAAE,EAAE;IACd,WAAW,EAAE,IAAI,GAAG,IAAI,EAAE,MAAM;IAChC,iBAAiB,EAAE,IAAI;IACvB,cAAc,EAAE,IAAI;IACpB,cAAc,EAAE;QACd,OAAO,EAAE,KAAK;QACd,QAAQ,EAAE,QAAQ;QAClB,KAAK,EAAE,oBAAoB;QAC3B,SAAS,EAAE,EAAE;KACd;CACF,CAAC"}

package/dist/utils.js

@@ -88,7 +88,7 @@ const path = __importStar(require("path"));
 const SENSITIVE_PATHS = new Set([
     '/', '/etc', '/usr', '/bin', '/sbin', '/var', '/tmp', '/dev', '/proc', '/sys',
     '/root', '/boot', '/lib', '/lib64', '/opt',
-    'C:\\', 'C:\\Windows', 'C:\\Windows\\System32',
+    'c:\\', 'c:\\windows', 'c:\\windows\\system32',
 ]);
 /**
  * Validate that a resolved file path stays within the project root.

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@stupidloud/codegraph",
-  "version": "0.7.20",
+  "version": "0.9.5",
   "description": "Supercharge Claude Code with semantic code intelligence. 94% fewer tool calls • 77% faster exploration • 100% local.",
   "main": "dist/index.js",
   "types": "dist/index.d.ts",
@@ -39,8 +39,8 @@
     "fast-string-width": "^3.0.2",
     "fast-wrap-ansi": "^0.2.0",
     "gpt-tokenizer": "^3.4.0",
+    "ignore": "^7.0.5",
     "jsonc-parser": "^3.3.1",
-    "node-sqlite3-wasm": "^0.8.30",
     "picomatch": "^4.0.3",
     "sisteransi": "^1.0.5",
     "tree-sitter-wasms": "^0.1.11",
@@ -54,10 +54,10 @@
     "vitest": "^2.1.9"
   },
   "optionalDependencies": {
-    "better-sqlite3": "^11.10.0",
+    "better-sqlite3": "^12.4.1",
     "sqlite-vss": "^0.1.2"
   },
   "engines": {
-    "node": ">=18.0.0 <25.0.0"
+    "node": ">=20.0.0 <25.0.0"
   }
 }

package/scripts/add-lang/bench.sh

@@ -0,0 +1,60 @@
+#!/usr/bin/env bash
+# Add-lang benchmark for ONE repo:
+#   clone -> wipe+index (with the codegraph on PATH) -> verify extraction ->
+#   with/without retrieval A/B (reuses scripts/agent-eval/run-all.sh).
+#
+# Assumes the codegraph dev build is already built + linked on PATH — the skill
+# runs `npm run build && ./scripts/local-install.sh` ONCE before looping repos.
+# The A/B is skipped if extraction fails its critical checks (don't burn $ on a
+# broken extractor); set FORCE_AB=1 to run it anyway.
+#
+# Usage: bench.sh <lang> <repo-name> <repo-url> "<question>" [headless|tmux|all]
+# Env:   CORPUS   corpus dir (default /tmp/codegraph-corpus, shared with agent-eval)
+set -uo pipefail
+
+LANG_TOKEN="${1:?usage: bench.sh <lang> <repo-name> <repo-url> \"<question>\" [mode]}"
+NAME="${2:?repo-name required}"
+URL="${3:?repo-url required}"
+Q="${4:?question required}"
+MODE="${5:-headless}"
+
+HARNESS="$(cd "$(dirname "$0")" && pwd)"
+AGENT_EVAL="$(cd "$HARNESS/../agent-eval" && pwd)"
+CORPUS="${CORPUS:-/tmp/codegraph-corpus}"
+REPO="$CORPUS/$NAME"
+
+command -v codegraph >/dev/null || { echo "no codegraph on PATH (build + ./scripts/local-install.sh first)"; exit 1; }
+
+echo "==================== add-lang bench: $NAME ($LANG_TOKEN) ===================="
+echo "codegraph: $(command -v codegraph) -> $(codegraph --version 2>/dev/null || echo '?')"
+
+# 1. Ensure the repo (shallow clone, reuse if present).
+mkdir -p "$CORPUS"
+if [ -d "$REPO/.git" ]; then
+  echo "→ reusing checkout: $REPO"
+else
+  echo "→ cloning $URL"
+  git clone --depth 1 "$URL" "$REPO" || { echo "git clone failed"; exit 1; }
+fi
+
+# 2. Wipe + index with the binary under test.
+echo "→ wiping .codegraph and indexing"
+rm -rf "$REPO/.codegraph"
+( cd "$REPO" && codegraph init -i ) || { echo "indexing failed"; exit 1; }
+
+# 3. Verify extraction (cheap guard before the paid A/B).
+echo "→ verifying extraction"
+node "$HARNESS/verify-extraction.mjs" "$REPO" "$LANG_TOKEN"
+VERIFY=$?
+
+# 4. Retrieval A/B (skipped if extraction is broken, unless FORCE_AB=1).
+if [ "$VERIFY" -ne 0 ] && [ "${FORCE_AB:-0}" != "1" ]; then
+  echo "→ SKIPPING A/B — extraction failed critical checks (set FORCE_AB=1 to override)"
+else
+  echo "→ retrieval A/B (mode=$MODE)"
+  bash "$AGENT_EVAL/run-all.sh" "$REPO" "$Q" "$MODE"
+fi
+
+echo "==================== bench complete: $NAME (verify exit=$VERIFY) ===================="
+# Exit reflects extraction: 0 = pass/warn, 1 = critical fail, 2 = couldn't read status.
+exit "$VERIFY"

package/scripts/add-lang/check-grammar.mjs

@@ -0,0 +1,75 @@
+#!/usr/bin/env node
+// Verify a tree-sitter grammar wasm is HEALTHY under the project's web-tree-sitter
+// runtime BEFORE writing an extractor. Prints the ABI version and parses a valid
+// sample many times in a multi-grammar context, to catch heap-corruption bugs
+// that silently drop nodes on every parse after the first.
+//
+// Why this exists: the tree-sitter-wasms Lua grammar is ABI 13 and corrupts the
+// shared WASM heap under web-tree-sitter 0.25 — Lua extraction degraded on every
+// file after the first (nested calls/imports vanished). The fix was to vendor the
+// upstream ABI-15 wasm. Run this on any new grammar first; if it FAILs, vendor a
+// newer build instead of using the tree-sitter-wasms one.
+//
+// Usage: node scripts/add-lang/check-grammar.mjs <lang|wasm-path> <valid-sample> [iterations]
+// Exit: 0 healthy, 1 corruption / parse errors, 2 could not run.
+// NOTE: the sample must be SYNTACTICALLY VALID — a broken sample fails for the
+//       wrong reason.
+
+import { readFileSync, existsSync } from 'node:fs';
+import { createRequire } from 'node:module';
+import { Parser, Language } from 'web-tree-sitter';
+
+const require = createRequire(import.meta.url);
+const fail = (code, msg) => { console.error(`[check-grammar] ${msg}`); process.exit(code); };
+
+const [token, sample, iterArg] = process.argv.slice(2);
+if (!token || !sample) fail(2, 'usage: check-grammar.mjs <lang|wasm-path> <valid-sample> [iterations]');
+if (!existsSync(sample)) fail(2, `sample not found: ${sample}`);
+const iters = iterArg ? parseInt(iterArg, 10) : 20;
+
+const SPECIAL = { csharp: 'c_sharp', 'c#': 'c_sharp' };
+function resolveWasm(t) {
+  if (t.endsWith('.wasm')) return existsSync(t) ? t : fail(2, `wasm not found: ${t}`);
+  const base = SPECIAL[t.toLowerCase()] ?? t.toLowerCase();
+  try { return require.resolve(`tree-sitter-wasms/out/tree-sitter-${base}.wasm`); } catch { /* try vendored */ }
+  const vendored = `src/extraction/wasm/tree-sitter-${base}.wasm`;
+  if (existsSync(vendored)) return vendored;
+  return fail(2, `no grammar for "${t}" — not in tree-sitter-wasms and not vendored`);
+}
+
+const wasmPath = resolveWasm(token);
+const source = readFileSync(sample, 'utf8');
+
+try { await Parser.init(); }
+catch { await Parser.init({ locateFile: () => require.resolve('web-tree-sitter/tree-sitter.wasm') }); }
+
+// Load a second, known-good grammar — the corruption surfaces under the
+// multi-grammar runtime that real indexing uses, not a single grammar in isolation.
+try { await Language.load(require.resolve('tree-sitter-wasms/out/tree-sitter-python.wasm')); } catch { /* ok */ }
+
+let language;
+try { language = await Language.load(wasmPath); }
+catch (e) { fail(2, `failed to load ${wasmPath}: ${e.message}`); }
+
+const parser = new Parser();
+parser.setLanguage(language);
+
+let ok = 0, err = 0;
+for (let i = 0; i < iters; i++) {
+  const tree = parser.parse(source);
+  if (tree.rootNode.hasError) err++; else ok++;
+}
+
+console.log(`grammar: ${wasmPath.split('/').pop()}`);
+console.log(`  ABI version: ${language.abiVersion}`);
+console.log(`  parses: ${ok} clean / ${err} with errors (of ${iters})`);
+if (err > 0) {
+  console.log(
+    `RESULT: FAIL — ${err}/${iters} parses produced ERROR trees on a valid sample. ` +
+    `This grammar corrupts under web-tree-sitter; vendor a newer (ABI 14/15) wasm ` +
+    `(see SKILL.md "Find a grammar"). Confirm your sample is syntactically valid first.`
+  );
+  process.exit(1);
+}
+console.log('RESULT: PASS — grammar parses cleanly and reuses safely.');
+process.exit(0);

package/scripts/add-lang/dump-ast.mjs

@@ -0,0 +1,103 @@
+#!/usr/bin/env node
+// Dump the tree-sitter AST for a sample file so you can write a LanguageExtractor
+// mapping. Loads a grammar .wasm directly via web-tree-sitter (the same runtime
+// codegraph uses) — you do NOT need to register the language first.
+//
+// Usage:
+//   node scripts/add-lang/dump-ast.mjs <lang|wasm-path> <sample-file> [--depth=N] [--full]
+// Examples:
+//   node scripts/add-lang/dump-ast.mjs lua sample.lua
+//   node scripts/add-lang/dump-ast.mjs src/extraction/wasm/tree-sitter-zig.wasm a.zig --depth=4
+//
+// Output: an indented AST (named nodes, with field names) followed by a
+// node-type FREQUENCY table. The frequency table is the payoff — it tells you
+// which node types to map to functionTypes / classTypes / importTypes / etc.
+
+import { readFileSync, existsSync } from 'node:fs';
+import { createRequire } from 'node:module';
+import { Parser, Language } from 'web-tree-sitter';
+
+const require = createRequire(import.meta.url);
+const fail = (msg) => { console.error(`[dump-ast] ${msg}`); process.exit(1); };
+
+const argv = process.argv.slice(2);
+const positional = argv.filter((a) => !a.startsWith('--'));
+const [langOrWasm, sampleFile] = positional;
+const depthFlag = argv.find((a) => a.startsWith('--depth='));
+const showAll = argv.includes('--full'); // also print anonymous (token) nodes
+const maxDepth = depthFlag ? parseInt(depthFlag.split('=')[1], 10) : (showAll ? Infinity : 8);
+
+if (!langOrWasm || !sampleFile) {
+  fail('usage: dump-ast.mjs <lang|wasm-path> <sample-file> [--depth=N] [--full]');
+}
+if (!existsSync(sampleFile)) fail(`sample file not found: ${sampleFile}`);
+
+// Language tokens whose tree-sitter-wasms filename differs from the token.
+const WASM_SPECIAL = { csharp: 'c_sharp', 'c#': 'c_sharp' };
+
+function resolveWasm(token) {
+  if (token.endsWith('.wasm')) {
+    if (!existsSync(token)) fail(`wasm not found: ${token}`);
+    return token;
+  }
+  const base = WASM_SPECIAL[token.toLowerCase()] ?? token.toLowerCase();
+  try {
+    return require.resolve(`tree-sitter-wasms/out/tree-sitter-${base}.wasm`);
+  } catch {
+    /* not in tree-sitter-wasms — try a vendored copy */
+  }
+  const vendored = `src/extraction/wasm/tree-sitter-${base}.wasm`;
+  if (existsSync(vendored)) return vendored;
+  fail(
+    `no grammar for "${token}" — not in tree-sitter-wasms and not vendored at ` +
+      `${vendored}. Pass an explicit .wasm path, or vendor one (see SKILL.md "Find a grammar").`
+  );
+}
+
+const wasmPath = resolveWasm(langOrWasm);
+const source = readFileSync(sampleFile, 'utf8');
+
+try {
+  await Parser.init();
+} catch {
+  await Parser.init({ locateFile: () => require.resolve('web-tree-sitter/tree-sitter.wasm') });
+}
+
+let language;
+try {
+  language = await Language.load(wasmPath);
+} catch (e) {
+  fail(`failed to load grammar ${wasmPath}: ${e.message}`);
+}
+
+const parser = new Parser();
+parser.setLanguage(language);
+const tree = parser.parse(source);
+
+const freq = new Map();
+const snippet = (node) => {
+  const t = node.text.replace(/\s+/g, ' ').trim();
+  return t.length > 48 ? `${t.slice(0, 48)}…` : t;
+};
+
+function walk(node, depth, fieldName) {
+  if (node.isNamed) freq.set(node.type, (freq.get(node.type) || 0) + 1);
+  if ((node.isNamed || showAll) && depth <= maxDepth) {
+    const field = fieldName ? `${fieldName}: ` : '';
+    const leaf = node.childCount === 0 ? `  "${snippet(node)}"` : '';
+    console.log(`${'  '.repeat(depth)}${field}${node.type}  @${node.startPosition.row + 1}:${node.startPosition.column}${leaf}`);
+  }
+  for (let i = 0; i < node.childCount; i++) {
+    const child = node.child(i);
+    if (child) walk(child, depth + 1, node.fieldNameForChild(i));
+  }
+}
+
+console.log(`\n# AST for ${sampleFile}  (grammar: ${wasmPath.split('/').pop()})\n`);
+walk(tree.rootNode, 0, null);
+
+console.log('\n# Node-type frequency (named nodes) — map the relevant ones in your extractor:\n');
+[...freq.entries()]
+  .sort((a, b) => b[1] - a[1])
+  .forEach(([type, n]) => console.log(`  ${String(n).padStart(5)}  ${type}`));
+console.log();

package/scripts/add-lang/verify-extraction.mjs

@@ -0,0 +1,70 @@
+#!/usr/bin/env node
+// Sanity-check that codegraph extracted REAL symbols (not just file/import nodes)
+// from a repo for a given language. Exits non-zero on a critical failure so it
+// can drive a write-extractor -> build -> re-check loop.
+//
+// Usage: node scripts/add-lang/verify-extraction.mjs <repo-path> <lang>
+// Reads `codegraph status <repo> --json` using whatever codegraph is on PATH,
+// so it reflects the binary that built the index.
+//
+// Exit codes: 0 = pass or soft-warn, 1 = critical fail, 2 = could not run.
+
+import { execFileSync } from 'node:child_process';
+
+const [repo, lang] = process.argv.slice(2);
+if (!repo || !lang) {
+  console.error('usage: verify-extraction.mjs <repo-path> <lang>');
+  process.exit(2);
+}
+
+let status;
+try {
+  const out = execFileSync('codegraph', ['status', repo, '--json'], { encoding: 'utf8' });
+  status = JSON.parse(out);
+} catch (e) {
+  console.error(`[verify] could not read codegraph status for ${repo}: ${e.message}`);
+  process.exit(2);
+}
+
+// Kinds that prove the extractor mapped AST node types (everything except
+// 'file' and 'import', which codegraph creates structurally for any language).
+const SYMBOL_KINDS = new Set([
+  'module', 'class', 'struct', 'interface', 'trait', 'protocol', 'function',
+  'method', 'property', 'field', 'variable', 'constant', 'enum', 'enum_member',
+  'type_alias', 'namespace', 'route', 'component',
+]);
+
+const byKind = status.nodesByKind || {};
+const langs = status.languages || [];
+const files = status.fileCount || 0;
+const edges = status.edgeCount || 0;
+const symbolKinds = Object.keys(byKind).filter((k) => SYMBOL_KINDS.has(k));
+const symbolCount = symbolKinds.reduce((s, k) => s + byKind[k], 0);
+
+const checks = [];
+const add = (severity, ok, label, detail) => checks.push({ severity, ok, label, detail });
+
+add('critical', status.initialized === true, 'index initialized', `initialized=${status.initialized}`);
+add('critical', langs.includes(lang), `language "${lang}" detected`, `languages=[${langs.join(', ')}]`);
+add('critical', symbolCount > 0, 'structural symbols extracted', `${symbolCount} symbols (${symbolKinds.join(', ') || 'NONE — only file/import nodes!'})`);
+add('soft', symbolCount >= files, 'symbol density >= 1/file', `${symbolCount} symbols across ${files} files`);
+add('soft', edges > files, 'edges resolved', `${edges} edges across ${files} files`);
+
+console.log(`\n# Extraction check — ${repo}  (lang=${lang}, backend=${status.backend})`);
+console.log(`  files=${files} nodes=${status.nodeCount} edges=${edges}`);
+console.log(`  nodesByKind: ${JSON.stringify(byKind)}\n`);
+for (const c of checks) console.log(`  ${c.ok ? '✓' : '✗'} ${c.label} — ${c.detail}`);
+
+const critical = checks.filter((c) => !c.ok && c.severity === 'critical');
+const soft = checks.filter((c) => !c.ok && c.severity === 'soft');
+console.log();
+if (critical.length) {
+  console.log(`RESULT: FAIL (${critical.length} critical) — extractor or grammar wiring is broken. Re-run dump-ast.mjs and fix the node-type mappings.`);
+  process.exit(1);
+}
+if (soft.length) {
+  console.log(`RESULT: WARN (${soft.length} soft) — extraction works but looks thin; inspect the counts above.`);
+  process.exit(0);
+}
+console.log('RESULT: PASS — extraction looks healthy.');
+process.exit(0);

package/scripts/agent-eval/audit.sh

@@ -0,0 +1,68 @@
+#!/usr/bin/env bash
+# One-shot CodeGraph quality audit:
+#   set version -> ensure corpus repo -> wipe+reindex with that version ->
+#   run with/without A/B -> restore the local dev link.
+#
+# Usage: audit.sh <version> <repo-name> <repo-url> "<question>" [headless|all]
+#   <version>    "local" (build + npm link this repo) | "latest" | a version (e.g. 0.7.10)
+#   <repo-name>  dir name under the corpus dir
+#   <repo-url>   git URL (cloned --depth 1 when the repo dir is missing)
+#   [mode]       headless (default) | all (also the interactive tmux arms)
+# Env: CORPUS  corpus dir (default: /tmp/codegraph-corpus)
+set -uo pipefail
+
+VERSION="${1:?usage: audit.sh <version> <repo-name> <repo-url> \"<question>\" [mode]}"
+NAME="${2:?repo-name required}"
+URL="${3:?repo-url required}"
+Q="${4:?question required}"
+MODE="${5:-headless}"
+
+HARNESS="$(cd "$(dirname "$0")" && pwd)"
+REPO_ROOT="$(cd "$HARNESS/../.." && pwd)"     # codegraph repo root
+CORPUS="${CORPUS:-/tmp/codegraph-corpus}"
+REPO="$CORPUS/$NAME"
+PKG="@colbymchenry/codegraph"
+
+echo "==================== CodeGraph audit ===================="
+echo "version=$VERSION  repo=$NAME  mode=$MODE  corpus=$CORPUS"
+echo
+
+# 1. Set the codegraph version under test (mutates the global install).
+if [ "$VERSION" = local ]; then
+  echo "→ [1/4] building + linking local dev build (local-install.sh)"
+  ( cd "$REPO_ROOT" && ./scripts/local-install.sh ) || { echo "local-install.sh failed"; exit 1; }
+else
+  echo "→ [1/4] installing $PKG@$VERSION globally"
+  npm install -g "$PKG@$VERSION" || { echo "npm install -g $PKG@$VERSION failed"; exit 1; }
+fi
+ACTUAL="$(codegraph --version 2>/dev/null || echo '?')"
+echo "  codegraph on PATH: $(command -v codegraph) -> $ACTUAL"
+
+# 2. Ensure the corpus repo exists (clone shallow if missing, reuse if present).
+mkdir -p "$CORPUS"
+if [ -d "$REPO/.git" ]; then
+  echo "→ [2/4] reusing existing checkout: $REPO"
+else
+  echo "→ [2/4] cloning $URL"
+  git clone --depth 1 "$URL" "$REPO" || { echo "git clone failed"; exit 1; }
+fi
+
+# 3. Wipe + re-index with THIS version (the index must be built by the same
+#    binary that serves it — different versions extract differently).
+echo "→ [3/4] wiping .codegraph and re-indexing with $ACTUAL"
+rm -rf "$REPO/.codegraph"
+( cd "$REPO" && codegraph init -i ) || { echo "indexing failed"; exit 1; }
+
+# 4. Run the with/without A/B.
+echo "→ [4/4] running A/B harness (mode=$MODE)"
+bash "$HARNESS/run-all.sh" "$REPO" "$Q" "$MODE"
+
+# Restore the dev link (the normal working state in this repo).
+echo
+echo "→ restoring local dev link (local-install.sh)"
+if ( cd "$REPO_ROOT" && ./scripts/local-install.sh >/dev/null 2>&1 ); then
+  echo "  global codegraph restored to dev build"
+else
+  echo "  WARN: restore failed — run ./scripts/local-install.sh manually"
+fi
+echo "==================== audit complete ===================="

package/scripts/agent-eval/itrun.sh

@@ -24,7 +24,7 @@ tmux kill-session -t "$SESSION" 2>/dev/null
 
 # Wide pane so the TUI doesn't hard-wrap tool lines.
 tmux new-session -d -s "$SESSION" -x 230 -y 60
-tmux send-keys -t "$SESSION" "cd $REPO && claude --dangerously-skip-permissions" Enter
+tmux send-keys -t "$SESSION" "cd $REPO && claude --dangerously-skip-permissions ${CLAUDE_EXTRA_ARGS:-}" Enter
 
 # Wait for the ❯ prompt (claude drew its UI), up to 60s. NOTE: ❯ appears on the
 # welcome screen seconds before the input actually accepts keystrokes, so this is