@stupidloud/codegraph 0.7.20 → 0.9.5

package/dist/mcp/index.js

@@ -52,9 +52,11 @@ Object.defineProperty(exports, "__esModule", { value: true });
 exports.ToolHandler = exports.tools = exports.StdioTransport = exports.MCPServer = void 0;
 const path = __importStar(require("path"));
 const index_1 = __importStar(require("../index"));
+const sync_1 = require("../sync");
 const transport_1 = require("./transport");
 const tools_1 = require("./tools");
 const server_instructions_1 = require("./server-instructions");
+const wasm_runtime_flags_1 = require("../extraction/wasm-runtime-flags");
 /**
  * Convert a file:// URI to a filesystem path.
  * Handles URL encoding and Windows drive letter paths.
@@ -85,6 +87,74 @@ const SERVER_INFO = {
  * MCP Protocol Version
  */
 const PROTOCOL_VERSION = '2024-11-05';
+/**
+ * How long to wait for the client's `roots/list` response before giving up
+ * and falling back to the process cwd.
+ */
+const ROOTS_LIST_TIMEOUT_MS = 5000;
+/**
+ * How often to poll `process.ppid` to detect parent process death (see #277).
+ * 5s is a deliberate trade-off: the failure mode being guarded against is rare
+ * (parent SIGKILL'd), and longer poll = less wakeup overhead while idle.
+ */
+const DEFAULT_PPID_POLL_MS = 5000;
+/**
+ * Resolve the PPID watchdog poll interval from an env override. A value of
+ * `0` disables the watchdog entirely (escape hatch for embedded scenarios
+ * where the parent legitimately re-parents the server on purpose). Anything
+ * non-numeric or negative falls back to the default.
+ */
+function parsePpidPollMs(raw) {
+    if (raw === undefined || raw === '')
+        return DEFAULT_PPID_POLL_MS;
+    const parsed = Number(raw);
+    if (!Number.isFinite(parsed))
+        return DEFAULT_PPID_POLL_MS;
+    if (parsed < 0)
+        return DEFAULT_PPID_POLL_MS;
+    return Math.floor(parsed);
+}
+/**
+ * Parse the host PID propagated across the `--liftoff-only` re-exec
+ * ({@link HOST_PPID_ENV}). Returns a positive integer PID, or null when
+ * unset/invalid — the direct-launch path, where the watchdog falls back to
+ * `process.ppid` divergence. PIDs of 0/1 are rejected (0 = unknown, 1 = init,
+ * i.e. already orphaned), so the watchdog doesn't latch onto init.
+ */
+function parseHostPpid(raw) {
+    if (raw === undefined || raw === '')
+        return null;
+    const parsed = Number(raw);
+    if (!Number.isInteger(parsed) || parsed <= 1)
+        return null;
+    return parsed;
+}
+/** True if a process with `pid` currently exists (signal-0 probe). */
+function isProcessAlive(pid) {
+    try {
+        process.kill(pid, 0);
+        return true;
+    }
+    catch {
+        return false;
+    }
+}
+/**
+ * Extract the first usable filesystem path from a `roots/list` result.
+ * Shape per MCP spec: `{ roots: [{ uri: "file:///path", name?: string }] }`.
+ * Returns null if the result is empty or malformed.
+ */
+function firstRootPath(result) {
+    if (!result || typeof result !== 'object')
+        return null;
+    const roots = result.roots;
+    if (!Array.isArray(roots) || roots.length === 0)
+        return null;
+    const first = roots[0];
+    if (typeof first?.uri !== 'string')
+        return null;
+    return fileUriToPath(first.uri);
+}
 /**
  * MCP Server for CodeGraph
  *
@@ -99,6 +169,26 @@ class MCPServer {
     // In-flight background init kicked off from handleInitialize. Tracked so the
     // sync retry path doesn't race against it (double-opening the SQLite file).
     initPromise = null;
+    // Whether the client advertised the MCP `roots` capability during initialize.
+    // If so, and no explicit project path was given, we ask it for the workspace
+    // root via roots/list rather than guessing from the (often wrong) cwd.
+    clientSupportsRoots = false;
+    // Guards the one-shot deferred resolution (roots/list or cwd) so we don't
+    // re-issue roots/list on every tool call.
+    rootsAttempted = false;
+    // PPID watchdog — see start(). Captured at construction so we always have a
+    // baseline, even if start() runs after a fork-style reparent.
+    originalPpid = process.ppid;
+    // The MCP host's PID, propagated across the `--liftoff-only` re-exec (see
+    // HOST_PPID_ENV). When set, the watchdog polls it directly: the re-exec
+    // inserts an intermediate process whose *death* — not just our reparenting —
+    // is what we'd otherwise miss. null on the direct (bundled) launch path.
+    hostPpid = parseHostPpid(process.env[wasm_runtime_flags_1.HOST_PPID_ENV]);
+    ppidWatchdog = null;
+    // Idempotency guard for stop(). Without it, the watchdog can race with the
+    // stdin `end`/`close` handlers (or SIGTERM/SIGINT) and double-close cg and
+    // the transport before process.exit() lands.
+    stopped = false;
     constructor(projectPath) {
         this.projectPath = projectPath || null;
         this.transport = new transport_1.StdioTransport();
@@ -122,6 +212,35 @@ class MCPServer {
         // Detect this and shut down gracefully to prevent orphaned processes.
         process.stdin.on('end', () => this.stop());
         process.stdin.on('close', () => this.stop());
+        // PPID watchdog (#277). Linux doesn't propagate parent death to children,
+        // so when the MCP host (Claude Code, opencode, …) is SIGKILL'd by the OOM
+        // killer / a force-quit / a container teardown, the child is reparented to
+        // init/systemd and the stdin `end`/`close` events don't always fire. The
+        // server would then linger indefinitely, holding inotify watches, file
+        // descriptors, and the SQLite WAL. Poll `process.ppid` and shut down the
+        // moment it changes from what we observed at startup. Cross-platform:
+        // reparenting changes ppid on Linux *and* macOS; on Windows the value can
+        // also drop to 0 once the parent is gone. When the CLI re-execs itself for
+        // `--liftoff-only`, an intermediate process sits between us and the host and
+        // outlives it, so our own ppid wouldn't change — in that case we poll the
+        // host PID (propagated via HOST_PPID_ENV) for liveness instead. The watchdog
+        // is `.unref()`'d so it never holds the event loop open on its own.
+        const pollMs = parsePpidPollMs(process.env.CODEGRAPH_PPID_POLL_MS);
+        if (pollMs > 0) {
+            this.ppidWatchdog = setInterval(() => {
+                const current = process.ppid;
+                const ppidChanged = current !== this.originalPpid;
+                const hostGone = this.hostPpid !== null && !isProcessAlive(this.hostPpid);
+                if (ppidChanged || hostGone) {
+                    const reason = ppidChanged
+                        ? `ppid ${this.originalPpid} -> ${current}`
+                        : `host pid ${this.hostPpid} exited`;
+                    process.stderr.write(`[CodeGraph MCP] Parent process exited (${reason}); shutting down.\n`);
+                    this.stop();
+                }
+            }, pollMs);
+            this.ppidWatchdog.unref();
+        }
     }
     /**
      * Try to initialize CodeGraph for the default project.
@@ -134,6 +253,8 @@ class MCPServer {
      * are still possible.
      */
     async tryInitializeDefault(projectPath) {
+        // Record where we searched so a later "not initialized" error can name it.
+        this.toolHandler.setDefaultProjectHint(projectPath);
         // Walk up parent directories to find nearest .codegraph/
         const resolvedRoot = (0, index_1.findNearestCodeGraphRoot)(projectPath);
         if (!resolvedRoot) {
@@ -172,10 +293,28 @@ class MCPServer {
         // Already initialized successfully
         if (this.toolHandler.hasDefaultCodeGraph())
             return;
-        // No project path to retry with
-        if (!this.projectPath)
-            return;
-        const resolvedRoot = (0, index_1.findNearestCodeGraphRoot)(this.projectPath);
+        // No explicit path was given at initialize. Resolve it now, exactly once:
+        // ask the client via roots/list (if it advertised roots), else use cwd.
+        // Deferring to here lets a roots answer override the wrong cwd, and the
+        // one-shot guard means we never re-issue roots/list per tool call.
+        if (!this.projectPath && !this.rootsAttempted) {
+            this.rootsAttempted = true;
+            this.initPromise = (this.clientSupportsRoots
+                ? this.initFromRoots()
+                : this.tryInitializeDefault(process.cwd())).finally(() => { this.initPromise = null; });
+            try {
+                await this.initPromise;
+            }
+            catch { /* fall through to last-resort below */ }
+            if (this.toolHandler.hasDefaultCodeGraph())
+                return;
+        }
+        // Last resort: re-walk from the best candidate we have. Picks up projects
+        // initialized after the server started, and covers clients that sent no
+        // usable initialize signal at all.
+        const candidate = this.projectPath ?? process.cwd();
+        this.toolHandler.setDefaultProjectHint(candidate);
+        const resolvedRoot = (0, index_1.findNearestCodeGraphRoot)(candidate);
         if (!resolvedRoot)
             return;
         try {
@@ -196,6 +335,29 @@ class MCPServer {
             // Still failing — will retry on next tool call
         }
     }
+    /**
+     * Resolve the project root via the MCP `roots/list` request and initialize
+     * from the first root the client reports. Falls back to the process cwd if
+     * the client returns no usable root or doesn't answer in time. See issue #196.
+     */
+    async initFromRoots() {
+        let target = process.cwd();
+        try {
+            const result = await this.transport.request('roots/list', undefined, ROOTS_LIST_TIMEOUT_MS);
+            const rootPath = firstRootPath(result);
+            if (rootPath) {
+                target = rootPath;
+            }
+            else {
+                process.stderr.write('[CodeGraph MCP] Client returned no workspace roots; falling back to process cwd.\n');
+            }
+        }
+        catch (err) {
+            const msg = err instanceof Error ? err.message : String(err);
+            process.stderr.write(`[CodeGraph MCP] roots/list request failed (${msg}); falling back to process cwd.\n`);
+        }
+        await this.tryInitializeDefault(target);
+    }
     /**
      * Start file watching on the active CodeGraph instance.
      * Logs sync activity to stderr for diagnostics.
@@ -203,6 +365,15 @@ class MCPServer {
     startWatching() {
         if (!this.cg)
             return;
+        // When the watcher is intentionally disabled (e.g. WSL2 /mnt drives, or
+        // CODEGRAPH_NO_WATCH=1), say so explicitly and tell the user how to keep
+        // the graph fresh — otherwise the silent staleness is hard to diagnose.
+        const disabledReason = (0, sync_1.watchDisabledReason)(this.projectPath ?? process.cwd());
+        if (disabledReason) {
+            process.stderr.write(`[CodeGraph MCP] File watcher disabled — ${disabledReason}. ` +
+                `The graph will not auto-update; run \`codegraph sync\` (or install the git sync hooks via \`codegraph init\`) to refresh.\n`);
+            return;
+        }
         const started = this.cg.watch({
             onSyncComplete: (result) => {
                 if (result.filesChanged > 0) {
@@ -216,11 +387,22 @@ class MCPServer {
         if (started) {
             process.stderr.write('[CodeGraph MCP] File watcher active — graph will auto-sync on changes\n');
         }
+        else {
+            // start() can also return false when recursive fs.watch isn't supported.
+            process.stderr.write('[CodeGraph MCP] File watcher unavailable on this platform — run `codegraph sync` to refresh the graph after changes.\n');
+        }
     }
     /**
      * Stop the server
      */
     stop() {
+        if (this.stopped)
+            return;
+        this.stopped = true;
+        if (this.ppidWatchdog) {
+            clearInterval(this.ppidWatchdog);
+            this.ppidWatchdog = null;
+        }
         // Close all cached cross-project connections first
         this.toolHandler.closeAll();
         // Close the main CodeGraph instance
@@ -273,17 +455,23 @@ class MCPServer {
      */
     async handleInitialize(request) {
         const params = request.params;
-        // Extract project path from rootUri or workspaceFolders
-        let projectPath = this.projectPath;
+        // Does the client support the MCP `roots` protocol? If so, and we have no
+        // explicit path, we ask it for the workspace root after the handshake
+        // instead of falling back to the (frequently wrong) cwd. See issue #196.
+        this.clientSupportsRoots = !!params?.capabilities?.roots;
+        // Explicit project signal, strongest first: a client-provided rootUri /
+        // workspaceFolders (LSP-style, non-standard but some clients send it), else
+        // the --path the server was launched with. cwd is NOT used here — we defer
+        // it so a roots/list answer can win over it.
+        let explicitPath = null;
         if (params?.rootUri) {
-            projectPath = fileUriToPath(params.rootUri);
+            explicitPath = fileUriToPath(params.rootUri);
         }
         else if (params?.workspaceFolders?.[0]?.uri) {
-            projectPath = fileUriToPath(params.workspaceFolders[0].uri);
+            explicitPath = fileUriToPath(params.workspaceFolders[0].uri);
         }
-        // Fall back to current working directory if no path provided
-        if (!projectPath) {
-            projectPath = process.cwd();
+        else if (this.projectPath) {
+            explicitPath = this.projectPath;
         }
         // Respond to the handshake BEFORE doing any heavy initialization. Loading
         // the SQLite DB and the tree-sitter WASM runtime can take many seconds on
@@ -304,13 +492,20 @@ class MCPServer {
             serverInfo: SERVER_INFO,
             instructions: server_instructions_1.SERVER_INSTRUCTIONS,
         });
-        // Kick off the default-project init in the background. Tool calls that
-        // arrive before it finishes will see the "not initialized yet" path and
-        // fall through to `retryInitIfNeeded`, which now waits for this promise
-        // rather than racing against it with a second open.
-        this.initPromise = this.tryInitializeDefault(projectPath).finally(() => {
-            this.initPromise = null;
-        });
+        // If we know the project dir, kick off init in the background now. Tool
+        // calls that arrive before it finishes fall through to `retryInitIfNeeded`,
+        // which waits for this promise rather than racing it with a second open.
+        //
+        // If we DON'T know it (no rootUri, no --path), defer: the first tool call
+        // resolves it via roots/list (when the client supports roots) or cwd. This
+        // is the fix for issue #196 — clients that launch the server outside the
+        // project and don't pass a rootUri previously got a misleading "not
+        // initialized" error on every call.
+        if (explicitPath) {
+            this.initPromise = this.tryInitializeDefault(explicitPath).finally(() => {
+                this.initPromise = null;
+            });
+        }
     }
     /**
      * Handle tools/list request

package/dist/mcp/index.js.map

@@ -1 +1 @@
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package/dist/mcp/server-instructions.d.ts

@@ -15,5 +15,5 @@
  * burn tokens. Reference only tools that exist on `main`; gate any
  * conditional tools behind feature checks if/when they ship.
  */
-export declare const SERVER_INSTRUCTIONS = "# Codegraph \u2014 code intelligence over an indexed knowledge graph\n\nCodegraph is a SQLite knowledge graph of every symbol, edge, and file\nin the workspace. Reads are sub-millisecond; the index lags writes by\nabout a second through the file watcher. Consult it BEFORE writing or\nediting code, not during.\n\n## Tool selection by intent\n\n- **\"How does X work? / trace X end to end / explain the Y system / architecture?\"** \u2192 `codegraph_explore` (PRIMARY for understanding \u2014 seed it with the key symbol names, read its output, don't grep+Read your way there)\n- **\"What is the symbol named X? / where is X defined?\"** \u2192 `codegraph_search` (pinpoint lookups)\n- **\"What's the deal with this task / feature / area?\"** \u2192 `codegraph_context` (lighter composed view of search + node + callers + callees)\n- **\"What calls this?\"** \u2192 `codegraph_callers`\n- **\"What does this call?\"** \u2192 `codegraph_callees`\n- **\"What would changing this break?\"** \u2192 `codegraph_impact`\n- **\"Show me this symbol's source / signature / docstring.\"** \u2192 `codegraph_node`\n- **\"What's in directory X?\"** \u2192 `codegraph_files`\n- **\"Is the index ready / what's its size?\"** \u2192 `codegraph_status`\n\n## Common chains\n\n- **Understanding / onboarding**: feed `codegraph_explore` the key symbol/file names and read its output (line-numbered source from many files in one call). If the question names nothing concrete, do ONE quick `codegraph_search` / `codegraph_context` to surface the names, then explore with them. Fill remaining gaps with `codegraph_node` / Read \u2014 don't drop back to grep+Read for the whole topic.\n- **Refactor planning**: `codegraph_search` \u2192 `codegraph_callers` \u2192 `codegraph_impact`. The blast-radius answer comes from impact, not from walking callers manually.\n- **Debugging a regression**: `codegraph_callers` of the suspected symbol; widen with `codegraph_impact` if an unexpected call appears.\n\n## Anti-patterns\n\n- **Don't search-then-Read your way through an understanding question** \u2014 feed the names you find into `codegraph_explore` instead of Reading the files one by one; it does that whole loop in one call and returns line numbers you can cite directly.\n- **Don't grep first** when looking up a symbol by name \u2014 `codegraph_search` is faster and returns kind + location + signature.\n- **Don't reach for `codegraph_explore` on a pinpoint \"where is X defined\" lookup** \u2014 `codegraph_search` is one cheap call.\n- **Don't query the index immediately after editing a file** \u2014 the watcher needs ~500ms to debounce + sync. Wait for the next turn.\n\n## Limitations\n\n- Index lags file writes by ~1 second.\n- Cross-file resolution is best-effort name matching; ambiguous calls may return multiple candidates.\n- No live correctness validation \u2014 that's still the TypeScript compiler / test suite / linter's job. Codegraph supplements those with structural context they don't have.\n";
+export declare const SERVER_INSTRUCTIONS = "# Codegraph \u2014 code intelligence over an indexed knowledge graph\n\nCodegraph is a SQLite knowledge graph of every symbol, edge, and file\nin the workspace. Reads are sub-millisecond; the index lags writes by\nabout a second through the file watcher. Consult it BEFORE writing or\nediting code, not during.\n\n## Answer directly \u2014 don't delegate exploration\n\nFor \"how does X work\", architecture, trace, or where-is-X questions,\nanswer DIRECTLY using 2-3 codegraph calls: `codegraph_context` first,\nthen ONE `codegraph_explore` for the source of the symbols it surfaces.\nCodegraph IS the pre-built search index \u2014 so delegating the lookup to a\nseparate file-reading sub-task/agent, or running your own grep + read\nloop, repeats work codegraph already did and costs more for the same\nanswer. Reach for raw Read/Grep only to confirm a specific detail\ncodegraph didn't cover. A direct codegraph answer is typically a handful\nof calls; a grep/read exploration is dozens.\n\n## Tool selection by intent\n\n- **\"How does X work? / trace X end to end / explain the Y system / architecture?\"** \u2192 `codegraph_explore` (PRIMARY for understanding \u2014 seed it with the key symbol names, read its output, don't grep+Read your way there)\n- **\"What is the symbol named X? / where is X defined?\"** \u2192 `codegraph_search` (pinpoint lookups)\n- **\"What's the deal with this task / feature / area?\"** \u2192 `codegraph_context` (lighter composed view of search + node + callers + callees)\n- **\"What calls this?\"** \u2192 `codegraph_callers`\n- **\"What does this call?\"** \u2192 `codegraph_callees`\n- **\"What would changing this break?\"** \u2192 `codegraph_impact`\n- **\"Show me this symbol's source / signature / docstring.\"** \u2192 `codegraph_node`\n- **\"Show me several related symbols' source / survey an area.\"** \u2192 `codegraph_explore` (ONE capped call; prefer over many codegraph_node/Read)\n- **\"What's in directory X?\"** \u2192 `codegraph_files`\n- **\"Is the index ready / what's its size?\"** \u2192 `codegraph_status`\n\n## Common chains\n\n- **Understanding / onboarding**: feed `codegraph_explore` the key symbol/file names and read its output (line-numbered source from many files in one call). If the question names nothing concrete, do ONE quick `codegraph_search` / `codegraph_context` to surface the names, then explore with them. Fill remaining gaps with `codegraph_node` / Read \u2014 don't drop back to grep+Read for the whole topic.\n- **Refactor planning**: `codegraph_search` \u2192 `codegraph_callers` \u2192 `codegraph_impact`. The blast-radius answer comes from impact, not from walking callers manually.\n- **Debugging a regression**: `codegraph_callers` of the suspected symbol; widen with `codegraph_impact` if an unexpected call appears.\n\n## Anti-patterns\n\n- **Don't search-then-Read your way through an understanding question** \u2014 feed the names you find into `codegraph_explore` instead of Reading the files one by one; it does that whole loop in one call and returns line numbers you can cite directly.\n- **Don't grep first** when looking up a symbol by name \u2014 `codegraph_search` is faster and returns kind + location + signature.\n- **Don't reach for `codegraph_explore` on a pinpoint \"where is X defined\" lookup** \u2014 `codegraph_search` is one cheap call.\n- **Don't chain `codegraph_search` + `codegraph_node`** when you just want context \u2014 `codegraph_context` is one round-trip.\n- **Don't loop `codegraph_node` over many symbols** \u2014 one `codegraph_explore` call returns them all grouped by file, while each separate call re-reads the whole context and costs far more. Use `codegraph_node` for a single symbol.\n- **Don't query the index immediately after editing a file** \u2014 the watcher needs ~500ms to debounce + sync. Wait for the next turn.\n\n## Limitations\n\n- Index lags file writes by ~1 second.\n- Cross-file resolution is best-effort name matching; ambiguous calls may return multiple candidates.\n- No live correctness validation \u2014 that's still the TypeScript compiler / test suite / linter's job. Codegraph supplements those with structural context they don't have.\n";
 //# sourceMappingURL=server-instructions.d.ts.map

package/dist/mcp/server-instructions.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"server-instructions.d.ts","sourceRoot":"","sources":["../../src/mcp/server-instructions.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;GAgBG;AACH,eAAO,MAAM,mBAAmB,07FAqC/B,CAAC"}
+{"version":3,"file":"server-instructions.d.ts","sourceRoot":"","sources":["../../src/mcp/server-instructions.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;GAgBG;AACH,eAAO,MAAM,mBAAmB,ymIAoD/B,CAAC"}

package/dist/mcp/server-instructions.js

@@ -25,6 +25,18 @@ in the workspace. Reads are sub-millisecond; the index lags writes by
 about a second through the file watcher. Consult it BEFORE writing or
 editing code, not during.
 
+## Answer directly — don't delegate exploration
+
+For "how does X work", architecture, trace, or where-is-X questions,
+answer DIRECTLY using 2-3 codegraph calls: \`codegraph_context\` first,
+then ONE \`codegraph_explore\` for the source of the symbols it surfaces.
+Codegraph IS the pre-built search index — so delegating the lookup to a
+separate file-reading sub-task/agent, or running your own grep + read
+loop, repeats work codegraph already did and costs more for the same
+answer. Reach for raw Read/Grep only to confirm a specific detail
+codegraph didn't cover. A direct codegraph answer is typically a handful
+of calls; a grep/read exploration is dozens.
+
 ## Tool selection by intent
 
 - **"How does X work? / trace X end to end / explain the Y system / architecture?"** → \`codegraph_explore\` (PRIMARY for understanding — seed it with the key symbol names, read its output, don't grep+Read your way there)
@@ -34,6 +46,7 @@ editing code, not during.
 - **"What does this call?"** → \`codegraph_callees\`
 - **"What would changing this break?"** → \`codegraph_impact\`
 - **"Show me this symbol's source / signature / docstring."** → \`codegraph_node\`
+- **"Show me several related symbols' source / survey an area."** → \`codegraph_explore\` (ONE capped call; prefer over many codegraph_node/Read)
 - **"What's in directory X?"** → \`codegraph_files\`
 - **"Is the index ready / what's its size?"** → \`codegraph_status\`
 
@@ -48,6 +61,8 @@ editing code, not during.
 - **Don't search-then-Read your way through an understanding question** — feed the names you find into \`codegraph_explore\` instead of Reading the files one by one; it does that whole loop in one call and returns line numbers you can cite directly.
 - **Don't grep first** when looking up a symbol by name — \`codegraph_search\` is faster and returns kind + location + signature.
 - **Don't reach for \`codegraph_explore\` on a pinpoint "where is X defined" lookup** — \`codegraph_search\` is one cheap call.
+- **Don't chain \`codegraph_search\` + \`codegraph_node\`** when you just want context — \`codegraph_context\` is one round-trip.
+- **Don't loop \`codegraph_node\` over many symbols** — one \`codegraph_explore\` call returns them all grouped by file, while each separate call re-reads the whole context and costs far more. Use \`codegraph_node\` for a single symbol.
 - **Don't query the index immediately after editing a file** — the watcher needs ~500ms to debounce + sync. Wait for the next turn.
 
 ## Limitations

package/dist/mcp/server-instructions.js.map

@@ -1 +1 @@
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+{"version":3,"file":"server-instructions.js","sourceRoot":"","sources":["../../src/mcp/server-instructions.ts"],"names":[],"mappings":";;;AAAA;;;;;;;;;;;;;;;;GAgBG;AACU,QAAA,mBAAmB,GAAG;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;CAoDlC,CAAC"}

package/dist/mcp/tools.d.ts

@@ -97,11 +97,17 @@ export declare const tools: ToolDefinition[];
 export declare class ToolHandler {
     private cg;
     private projectCache;
+    private defaultProjectHint;
     constructor(cg: CodeGraph | null);
     /**
      * Update the default CodeGraph instance (e.g. after lazy initialization)
      */
     setDefaultCodeGraph(cg: CodeGraph): void;
+    /**
+     * Record the directory the server tried to resolve the default project from.
+     * Used only to make the "no default project" error actionable.
+     */
+    setDefaultProjectHint(searchedPath: string): void;
     /**
      * Whether a default CodeGraph instance is available
      */
@@ -127,9 +133,19 @@ export declare class ToolHandler {
      */
     closeAll(): void;
     /**
-     * Validate that a value is a non-empty string
+     * Validate that a value is a non-empty string within length bounds.
+     *
+     * The `maxLength` cap protects against MCP clients that ship huge
+     * payloads (10MB+ query strings either by accident or maliciously).
+     * Without this, a single oversized input can pin the FTS5 index or
+     * exhaust memory before any real work runs.
      */
     private validateString;
+    /**
+     * Validate an optional path-like string input. Returns the value if
+     * valid (or undefined), or a ToolResult with the error.
+     */
+    private validateOptionalPath;
     /**
      * Execute a tool by name
      */
@@ -234,6 +250,14 @@ export declare class ToolHandler {
     private formatSearchResults;
     private formatNodeList;
     private formatImpact;
+    /**
+     * Build a compact structural outline of a container symbol from its
+     * indexed children (methods, fields, properties, …) — name, kind,
+     * line number, and signature — so the agent gets the shape of a class
+     * without the full source of every method. Returns '' when the container
+     * has no indexed children, so the caller can fall back to full source.
+     */
+    private buildContainerOutline;
     private formatNodeDetails;
     private formatTaskContext;
     private textResult;

package/dist/mcp/tools.d.ts.map

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