@sjcrh/proteinpaint-server 2.16.0 → 2.18.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (22) hide show
  1. package/dataset/clinvar.hg19.js +53 -51
  2. package/dataset/clinvar.hg38.js +60 -58
  3. package/dataset/clinvar.js +49 -55
  4. package/genome/CriGri.js +23 -1853
  5. package/genome/danRer10.js +48 -1108
  6. package/genome/dm3.js +47 -60
  7. package/genome/dm6.js +48 -1916
  8. package/genome/galGal5.js +48 -23522
  9. package/genome/galGal6.js +48 -512
  10. package/genome/hg19.js +210 -304
  11. package/genome/hg38.js +110 -474
  12. package/genome/hg38.test.js +42 -409
  13. package/genome/hgvirus.js +21 -43
  14. package/genome/mm10.js +70 -135
  15. package/genome/mm9.js +82 -118
  16. package/genome/rn6.js +49 -1000
  17. package/package.json +11 -7
  18. package/server.js +1 -1
  19. package/shared/common.js +4 -0
  20. package/src/serverconfig.js +10 -2
  21. package/utils/fastclust.R +16 -6
  22. package/genome/genome.sql +0 -54
package/genome/rn6.js CHANGED
@@ -1,1000 +1,49 @@
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- module.exports = {
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- species: 'rat',
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- genomefile: 'genomes/rn6.gz',
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- genedb: {
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- dbfile: 'anno/genes.rn6.db'
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- },
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- tracks: [
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- {
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- __isgene: true, // only for initialization
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- translatecoding: true, // instructs to translate coding:[]
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- file: 'anno/ncbiRefSeq.rn6.gz',
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- type: 'bedj',
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- name: 'RefGene',
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- stackheight: 16,
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- stackspace: 1,
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- vpad: 4,
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- color: '#1D591D'
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- },
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- {
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- type: 'bedj',
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- name: 'RepeatMasker',
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- stackheight: 14,
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- file: 'anno/rmsk.rn6.gz',
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- onerow: true,
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- categories: {
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- SINE: { color: '#ED8C8E', label: 'SINE' },
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- LINE: { color: '#EDCB8C', label: 'LINE' },
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- LTR: { color: '#E38CED', label: 'LTR' },
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- DNA: { color: '#8C8EED', label: 'DNA transposon' },
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- simple: { color: '#8EB88C', label: 'Simple repeats' },
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- low_complexity: { color: '#ACEBA9', label: 'Low complexity' },
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- satellite: { color: '#B59A84', label: 'Satellite' },
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- RNA: { color: '#9DE0E0', label: 'RNA repeat' },
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- other: { color: '#9BADC2', label: 'Other' },
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- unknown: { color: '#858585', label: 'Unknown' }
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- }
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- }
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- ],
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- defaultcoord: {
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- chr: 'chr6',
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- start: 77607000,
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- stop: 77625000,
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- gene: 'Pax9'
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- },
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-
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- majorchr: `chr1 282763074
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- chr2 266435125
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- chr4 184226339
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- chr3 177699992
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- chr5 173707219
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- chrX 159970021
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- chr6 147991367
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- chr7 145729302
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- chr8 133307652
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- chr9 122095297
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- chr14 115493446
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- chr13 114033958
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- chr10 112626471
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- chr15 111246239
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- chr17 90843779
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- chr16 90668790
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- chr11 90463843
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- chr18 88201929
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- chr19 62275575
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- chr20 56205956
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- chr12 52716770
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- chrY 3310458`,
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- minorchr: `
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- chrY_KL568162v1_random 10937627
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- chrY_KL568139v1_random 9752924
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- chrY_KL568161v1_random 7627431
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- chrY_KL568148v1_random 6483517
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- chrY_KL568157v1_random 5447879
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- chrY_KL568160v1_random 4317250
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- chrY_KL568151v1_random 3931032
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- chrY_KL568149v1_random 3292674
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- chrY_KL568141v1_random 2733323
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- chrY_KL568156v1_random 2193381
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- chrY_KL568159v1_random 1977169
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- chrY_KL568155v1_random 1365599
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- chrY_KL568140v1_random 1351663
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- chrY_KL568158v1_random 1284477
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- chrY_KL568152v1_random 1069101
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- chrY_KL568164v1_random 1009277
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- chrY_KL568150v1_random 866433
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- chrY_KL568163v1_random 753291
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- chrUn_KL568473v1 555557
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- chrY_KL568147v1_random 464092
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- chrUn_KL568409v1 409149
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- chrY_KL568165v1_random 398163
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- chrY_KL568143v1_random 343819
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- chrUn_KL568374v1 333641
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- chrY_KL568142v1_random 332284
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- chrUn_KL568418v1 276968
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- chrUn_KL568451v1 259454
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- chrUn_KL568353v1 246307
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- chrY_KL568153v1_random 239643
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- chr4_KL567939v1_random 227955
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- chrY_KL568154v1_random 215559
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- chrY_KL568144v1_random 209128
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- chrUn_KL568410v1 197620
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- chrY_KL568166v1_random 188438
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- chrY_KL568145v1_random 180016
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- chrUn_KL568458v1 179901
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- chrUn_KL568432v1 170578
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- chrUn_KL568465v1 161686
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- chrUn_AABR07024382v1 161493
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- chrUn_AABR07024188v1 156216
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- chrUn_KL568405v1 151075
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- chrUn_KL568487v1 150036
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- chrUn_KL568449v1 148379
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- chr5_KL567959v1_random 147722
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- chrUn_KL568438v1 140435
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- chrUn_AABR07024291v1 140190
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- chrUn_KL568414v1 134730
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- chrUn_AABR07024047v1 128550
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- chrUn_KL568318v1 125475
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- chrUn_KL568447v1 122693
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- chrUn_KL568446v1 122070
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- chrY_KL568146v1_random 122062
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- chrUn_KL568319v1 119946
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- chrUn_KL568468v1 117679
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- chrUn_KL568413v1 115560
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- chrUn_KL568354v1 113311
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- chrUn_KL568362v1 110326
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- chrUn_KL568415v1 110043
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- chrUn_KL568421v1 106580
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- chr9_KL568003v1_random 104398
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- chrUn_KL568434v1 100599
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- chr3_KL567919v1_random 100126
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- chrUn_AABR07024421v1 97361
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- chrUn_KL568482v1 97190
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- chrUn_KL568460v1 96610
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- chrUn_AABR07024203v1 96120
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- chr8_KL568001v1_random 95634
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- chrUn_KL568315v1 91871
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- chrUn_KL568336v1 91174
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- chrUn_KL568366v1 89457
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- chrUn_KL568334v1 86017
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- chrUn_KL568379v1 85300
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- chrUn_KL568346v1 83525
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- chrUn_AABR07024124v1 82313
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- chrUn_KL568419v1 82153
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- chrUn_KL568450v1 81653
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- chrUn_KL568328v1 79909
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- chrUn_KL568477v1 79564
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- chrUn_KL568470v1 78834
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- chrUn_KL568360v1 78647
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- chrUn_KL568377v1 78358
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- chrUn_KL568463v1 78222
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- chr4_KL567940v1_random 77814
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- chr15_KL568067v1_random 76800
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- chrUn_KL568454v1 75706
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- chrUn_KL568397v1 75068
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- chrX_KL568125v1_random 72847
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- chrUn_KL568388v1 70933
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- chrUn_KL568337v1 70310
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- chrUn_KL568412v1 69990
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- chrX_KL568126v1_random 69551
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- chr7_KL567994v1_random 69252
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- chrUn_KL568398v1 68568
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- chrUn_AABR07024145v1 68209
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- chrUn_AABR07024104v1 66549
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- chr4_KL567946v1_random 66194
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- chrUn_KL568324v1 66040
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- chrUn_KL568464v1 65989
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- chrUn_AABR07024039v1 65089
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- chrUn_KL568381v1 64584
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- chrUn_KL568440v1 62701
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- chrUn_AABR07024031v1 62230
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- chrUn_KL568417v1 62095
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- chr2_KL567908v1_random 61811
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- chrUn_KL568443v1 61029
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- chr13_KL568051v1_random 60838
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- chr19_KL568101v1_random 59862
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- chr3_KL567926v1_random 59501
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- chrUn_KL568423v1 57880
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- chr18_KL568097v1_random 57850
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- chr2_KL567914v1_random 57161
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- chrUn_KL568453v1 56678
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- chr4_KL567947v1_random 56466
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- chrUn_KL568395v1 56177
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- chrUn_KL568445v1 55656
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- chrUn_KL568430v1 55205
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- chrUn_KL568325v1 54929
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- chrUn_AABR07024102v1 54789
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- chr4_KL567941v1_random 54041
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- chr2_KL567907v1_random 53909
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- chr1_KL567891v1_random 53404
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- chr19_KL568102v1_random 53245
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- chrUn_AABR07024120v1 52816
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- chrUn_KL568424v1 52566
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- chrUn_KL568355v1 51892
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- chrUn_KL568433v1 51123
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- chr16_KL568080v1_random 49795
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- chrX_KL568114v1_random 49370
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- chrUn_KL568282v1 48841
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- chr9_KL568005v1_random 48638
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- chr11_KL568019v1_random 48508
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- chrX_KL568137v1_random 47458
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- chrUn_KL568462v1 47307
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- chrUn_KL568344v1 47276
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- chr2_KL567901v1_random 46970
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- chrUn_KL568467v1 46639
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- chrUn_KL568408v1 46319
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- chrUn_KL568342v1 46249
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- chr16_KL568079v1_random 45872
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- chrUn_KL568370v1 45784
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- chr18_KL568096v1_random 45622
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- chrUn_KL568472v1 45419
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- chrUn_KL568431v1 45117
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- chr20_KL568108v1_random 44883
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- chrUn_KL568350v1 44681
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- chrUn_KL568466v1 44605
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- chrUn_AABR07024398v1 44505
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- chrUn_AABR07024066v1 44061
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- chrUn_KL568461v1 43373
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- chrX_KL568118v1_random 42845
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- chrUn_KL568357v1 42088
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- chrUn_AABR07024106v1 41833
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- chrUn_KL568480v1 41802
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- chrX_KL568136v1_random 41179
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- chr13_KL568045v1_random 40838
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- chr5_KL567951v1_random 40651
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- chrX_KL568116v1_random 40570
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- chrUn_KL568364v1 40094
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- chr7_KL567984v1_random 39602
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- chr15_KL568064v1_random 39113
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- chrUn_KL568292v1 38332
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- chrUn_KL568479v1 38297
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- chr7_KL567981v1_random 38234
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- chrUn_KL568361v1 38115
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- chrUn_KL568471v1 37571
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- chrUn_KL568510v1 37283
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- chr8_KL567997v1_random 36789
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- chrUn_KL568402v1 36615
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- chrUn_KL568452v1 36554
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- chr7_KL567988v1_random 36409
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- chrUn_KL568483v1 36071
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- chrUn_KL568345v1 35857
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- chrUn_AABR07024042v1 35846
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- chrUn_KL568442v1 35498
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- chr14_KL568057v1_random 35355
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- chr11_KL568029v1_random 35203
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- chrUn_KL568257v1 35119
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- chrUn_KL568348v1 34944
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- chrUn_KL568187v1 34792
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- chr2_KL567898v1_random 34630
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- chr2_KL567913v1_random 34458
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- chrUn_KL568185v1 34391
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- chr1_KL567892v1_random 34086
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- chr5_KL567954v1_random 33929
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- chr14_KL568053v1_random 33884
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- chrUn_KL568191v1 33866
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- chrUn_KL568322v1 33480
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- chrUn_KL568314v1 33342
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- chr16_KL568076v1_random 33299
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- chr3_KL567917v1_random 33261
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- chr17_KL568092v1_random 33190
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- chr2_KL567902v1_random 33155
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- chrUn_KL568420v1 33038
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- chr2_KL567903v1_random 32912
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- chrX_KL568122v1_random 32860
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- chr5_KL567957v1_random 32762
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- chrUn_AABR07024192v1 32611
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- chrUn_KL568436v1 32325
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- chr2_KL567906v1_random 31912
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- chrX_KL568134v1_random 31813
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- chrUn_AABR07024041v1 31641
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- chrUn_KL568193v1 31523
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- chr1_AABR07046231v1_random 31509
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- chrUn_KL568439v1 31478
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- chr14_KL568054v1_random 31451
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- chrUn_KL568387v1 31396
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- chr17_KL568085v1_random 31300
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- chr1_KL567893v1_random 30950
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- chrUn_KL568457v1 30706
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- chrUn_KL568330v1 30684
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- chrUn_KL568481v1 30624
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- chrUn_KL568399v1 30444
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- chr1_KL567894v1_random 30438
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- chrUn_KL568196v1 29796
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- chrX_KL568130v1_random 29690
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- chrUn_KL568475v1 29518
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- chr9_KL568006v1_random 29490
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- chr10_KL568018v1_random 29483
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- chrX_KL568133v1_random 29461
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- chr20_KL568109v1_random 29266
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- chrUn_KL568307v1 29238
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- chrUn_KL568400v1 29228
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- chr1_KL567882v1_random 28706
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- chrUn_KL568406v1 28554
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- chr10_KL568010v1_random 28524
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- chr1_KL567881v1_random 28452
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- chr15_KL568068v1_random 28441
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- chr11_KL568024v1_random 28231
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- chr4_KL567937v1_random 28091
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- chr14_KL568059v1_random 27955
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- chr15_KL568072v1_random 27900
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- chrUn_KL568485v1 27645
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- chr4_KL567933v1_random 27386
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- chr5_KL567958v1_random 27327
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- chr10_KL568009v1_random 27282
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- chrUn_KL568228v1 26706
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- chr1_KL567895v1_random 26645
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- chrUn_KL568321v1 26605
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- chr7_KL567975v1_random 26321
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- chr7_KL567993v1_random 26319
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- chr6_KL567965v1_random 26164
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- chrUn_AABR07024263v1 26083
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- chr10_KL568016v1_random 26063
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- chrUn_KL568391v1 25619
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- chrUn_KL568295v1 25592
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- chr6_KL567972v1_random 25590
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- chr3_KL567924v1_random 25463
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- chr4_KL567944v1_random 25173
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- chr7_KL567986v1_random 25064
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- chrUn_KL568427v1 24952
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- chrUn_KL568507v1 24931
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- chrUn_KL568356v1 24824
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- chr19_KL568100v1_random 24817
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- chr7_KL567976v1_random 24724
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- chrUn_KL568404v1 24694
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- chrUn_KL568511v1 24582
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- chrUn_AABR07024032v1 24546
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- chr11_KL568021v1_random 24537
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- chr1_KL567889v1_random 24468
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- chr11_KL568020v1_random 24193
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- chr10_KL568011v1_random 24114
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- chrUn_KL568343v1 23983
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- chrUn_KL568389v1 23929
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- chr13_KL568046v1_random 23864
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- chr17_KL568088v1_random 23848
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- chrUn_KL568512v1 23752
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- chrUn_KL568490v1 23674
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- chrUn_KL568488v1 23475
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- chr2_KL567911v1_random 23371
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- chr14_KL568052v1_random 23128
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- chr8_KL568002v1_random 23102
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- chr13_KL568041v1_random 22880
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- chrUn_KL568248v1 22287
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- chrUn_KL568349v1 21578
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- chrUn_AABR07024044v1 21485
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- chr4_KL567938v1_random 21336
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- chrUn_KL568411v1 21210
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- chr13_KL568044v1_random 21067
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- chrUn_KL568474v1 20991
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- chrUn_KL568312v1 20693
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- chr4_KL567943v1_random 20550
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- chrUn_KL568270v1 19998
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- chr2_KL567915v1_random 19935
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- chr1_KL567884v1_random 19577
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- chr11_KL568025v1_random 19565
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- chr9_KL568007v1_random 19393
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- chr13_KL568049v1_random 19070
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- chr3_KL567916v1_random 18861
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- chr8_KL567995v1_random 18840
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- chrUn_KL568219v1 18520
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- chrUn_AABR07024122v1 18491
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- chr12_KL568036v1_random 18420
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- chr3_KL567920v1_random 17963
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- chr8_KL567999v1_random 17960
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- chrX_KL568111v1_random 17895
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- chr5_KL567953v1_random 17865
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- chr12_KL568039v1_random 17744
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- chrUn_KL568212v1 17641
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- chr13_KL568048v1_random 17062
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- chr10_KL568017v1_random 16434
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- chr15_KL568066v1_random 16414
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- chr14_KL568058v1_random 16413
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- chrM 16313
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- chrUn_KL568316v1 16204
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- chrUn_AABR07024262v1 15893
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- chr17_KL568084v1_random 15805
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- chr11_KL568026v1_random 15784
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- chrUn_KL568380v1 15687
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- chr15_KL568063v1_random 15622
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- chr10_KL568015v1_random 15525
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- chrUn_KL568428v1 15511
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- chr16_KL568075v1_random 15415
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- chrUn_KL568198v1 15369
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- chr3_KL567921v1_random 15352
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- chrUn_KL568251v1 15341
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- chrUn_KL568441v1 15269
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- chr6_KL567973v1_random 15169
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- chrUn_KL568215v1 15161
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- chr7_KL567982v1_random 15070
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- chr4_KL567935v1_random 14953
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- chr6_KL567971v1_random 14904
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- chrX_KL568121v1_random 14896
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- chr12_KL568033v1_random 14885
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- chr6_KL567968v1_random 14678
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- chrUn_KL568476v1 14444
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- chr4_KL567936v1_random 14424
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- chr7_KL567987v1_random 14346
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- chrUn_KL568218v1 14221
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- chrUn_KL568323v1 14207
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- chr7_KL567980v1_random 14205
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- chr2_KL567900v1_random 14052
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- chrUn_KL568390v1 14001
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- chrUn_KL568340v1 13915
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- chrX_KL568132v1_random 13907
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- chrUn_KL568498v1 13834
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- chrUn_KL568224v1 13776
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- chrUn_AABR07024394v1 13714
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- chrX_KL568117v1_random 13665
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- chrUn_KL568331v1 13633
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- chrX_KL568131v1_random 13600
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- chrUn_KL568437v1 13579
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- chr3_KL567927v1_random 13550
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- chrUn_KL568517v1 13491
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- chr7_KL567983v1_random 13399
452
- chrUn_KL568499v1 13135
453
- chr15_KL568070v1_random 13105
454
- chr15_KL568073v1_random 13013
455
- chrUn_KL568199v1 12984
456
- chrUn_KL568384v1 12708
457
- chrUn_KL568456v1 12647
458
- chrUn_KL568170v1 12470
459
- chr18_KL568099v1_random 12402
460
- chr5_KL567952v1_random 12293
461
- chrUn_AABR07024119v1 12249
462
- chrUn_KL568285v1 12244
463
- chrUn_KL568174v1 12149
464
- chrUn_KL568396v1 12101
465
- chrUn_KL568373v1 12016
466
- chr18_KL568093v1_random 12008
467
- chrUn_KL568455v1 11965
468
- chrUn_KL568484v1 11932
469
- chrUn_KL568190v1 11903
470
- chrUn_KL568514v1 11876
471
- chrUn_KL568448v1 11863
472
- chr2_KL567904v1_random 11839
473
- chrUn_KL568425v1 11782
474
- chr11_KL568030v1_random 11773
475
- chrUn_KL568495v1 11737
476
- chr5_KL567963v1_random 11717
477
- chrUn_KL568505v1 11671
478
- chrUn_KL568283v1 11645
479
- chr12_KL568040v1_random 11557
480
- chr2_KL567909v1_random 11554
481
- chr7_KL567977v1_random 11537
482
- chrUn_KL568326v1 11525
483
- chr6_KL567966v1_random 11408
484
- chrUn_AABR07024264v1 11303
485
- chr8_KL567998v1_random 11262
486
- chrUn_KL568167v1 11182
487
- chrUn_KL568225v1 11178
488
- chr2_KL567899v1_random 11090
489
- chrUn_KL568173v1 11069
490
- chrUn_KL568341v1 11068
491
- chr15_KL568074v1_random 11065
492
- chrUn_AABR07024040v1 11025
493
- chr12_KL568032v1_random 10672
494
- chrUn_AABR07024150v1 10542
495
- chr5_KL567961v1_random 10282
496
- chrUn_KL568304v1 10256
497
- chrUn_KL568300v1 10110
498
- chrUn_KL568335v1 10099
499
- chr3_KL567923v1_random 9678
500
- chrX_KL568127v1_random 9581
501
- chrUn_KL568358v1 9478
502
- chrX_KL568112v1_random 9469
503
- chrUn_KL568266v1 9310
504
- chr17_KL568091v1_random 9189
505
- chr16_KL568077v1_random 9129
506
- chr2_KL567912v1_random 8936
507
- chrUn_AABR07024205v1 8757
508
- chr2_KL567896v1_random 8590
509
- chr10_KL568014v1_random 8466
510
- chr11_KL568028v1_random 8337
511
- chr3_KL567932v1_random 8306
512
- chr20_KL568110v1_random 8294
513
- chr11_KL568031v1_random 8183
514
- chr4_KL567942v1_random 8128
515
- chrUn_KL568179v1 8008
516
- chrUn_KL568383v1 7756
517
- chrUn_KL568332v1 7699
518
- chr18_KL568095v1_random 7639
519
- chr17_KL568086v1_random 7522
520
- chr11_KL568022v1_random 7520
521
- chrUn_KL568288v1 7455
522
- chrUn_KL568180v1 7344
523
- chrUn_KL568367v1 7294
524
- chrUn_KL568223v1 7105
525
- chr12_KL568035v1_random 7095
526
- chrUn_KL568235v1 7064
527
- chrUn_KL568202v1 7012
528
- chr14_KL568055v1_random 6984
529
- chrUn_KL568382v1 6932
530
- chrUn_AABR07024321v1 6849
531
- chr12_KL568037v1_random 6770
532
- chr1_KL567885v1_random 6757
533
- chr4_KL567934v1_random 6638
534
- chr1_AABR07046230v1_random 6554
535
- chr5_KL567950v1_random 6510
536
- chrUn_KL568493v1 6345
537
- chrUn_KL568306v1 6288
538
- chrUn_KL568208v1 6280
539
- chr5_KL567964v1_random 6173
540
- chrUn_KL568310v1 6164
541
- chrUn_KL568197v1 6090
542
- chrUn_KL568226v1 6062
543
- chr5_KL567962v1_random 6046
544
- chr10_KL568013v1_random 5986
545
- chrUn_KL568393v1 5972
546
- chrUn_KL568263v1 5941
547
- chrUn_KL568313v1 5919
548
- chr15_KL568071v1_random 5890
549
- chr1_KL567888v1_random 5884
550
- chr15_KL568062v1_random 5881
551
- chrUn_KL568293v1 5847
552
- chrUn_KL568195v1 5841
553
- chrUn_KL568274v1 5820
554
- chrUn_AABR07024292v1 5784
555
- chrUn_KL568246v1 5769
556
- chrUn_KL568177v1 5691
557
- chrUn_KL568516v1 5687
558
- chrX_KL568128v1_random 5682
559
- chr1_KL567887v1_random 5668
560
- chrUn_KL568234v1 5584
561
- chr20_KL568106v1_random 5546
562
- chr3_KL567922v1_random 5545
563
- chrUn_KL568201v1 5537
564
- chrUn_KL568297v1 5492
565
- chrUn_KL568254v1 5473
566
- chrUn_KL568268v1 5463
567
- chr3_KL567930v1_random 5384
568
- chrUn_KL568271v1 5328
569
- chrUn_KL568286v1 5311
570
- chrUn_KL568518v1 5301
571
- chrUn_KL568290v1 5288
572
- chr3_KL567918v1_random 5278
573
- chrUn_KL568281v1 5240
574
- chrUn_KL568333v1 5195
575
- chrUn_KL568469v1 5093
576
- chrUn_KL568289v1 5072
577
- chrUn_KL568200v1 5023
578
- chrUn_AABR07024101v1 4996
579
- chrUn_KL568497v1 4939
580
- chrUn_KL568513v1 4908
581
- chrUn_KL568299v1 4870
582
- chrUn_KL568256v1 4854
583
- chr18_KL568098v1_random 4827
584
- chr13_KL568043v1_random 4810
585
- chr7_KL567985v1_random 4799
586
- chrUn_KL568280v1 4786
587
- chr14_KL568061v1_random 4767
588
- chr5_KL567949v1_random 4694
589
- chrUn_KL568242v1 4688
590
- chr17_KL568090v1_random 4623
591
- chrUn_AABR07024046v1 4613
592
- chr12_AABR07051059v1_random 4594
593
- chr20_KL568107v1_random 4592
594
- chrUn_AABR07023990v1 4561
595
- chr20_KL568103v1_random 4554
596
- chrUn_AABR07024118v1 4550
597
- chr2_KL567897v1_random 4528
598
- chr5_KL567960v1_random 4527
599
- chrUn_KL568363v1 4501
600
- chr1_KL567879v1_random 4483
601
- chrUn_AABR07024105v1 4462
602
- chr3_KL567928v1_random 4407
603
- chrUn_AABR07024115v1 4365
604
- chrUn_KL568259v1 4341
605
- chr6_KL567969v1_random 4340
606
- chrUn_AABR07024067v1 4328
607
- chrUn_AABR07024222v1 4316
608
- chrX_KL568120v1_random 4293
609
- chrX_KL568138v1_random 4289
610
- chrUn_KL568372v1 4252
611
- chr2_AABR07045975v1_random 4223
612
- chr13_KL568047v1_random 4212
613
- chr9_AABR07051155v1_random 4212
614
- chrX_KL568123v1_random 4208
615
- chrUn_KL568237v1 4201
616
- chrUn_KL568260v1 4168
617
- chrUn_KL568186v1 4076
618
- chr1_AABR07046142v1_random 4043
619
- chrUn_AABR07024123v1 3961
620
- chr7_KL567978v1_random 3931
621
- chrUn_KL568273v1 3880
622
- chr13_AABR07050784v1_random 3876
623
- chrUn_KL568347v1 3871
624
- chrUn_AABR07024193v1 3838
625
- chr9_KL568004v1_random 3829
626
- chrUn_KL568365v1 3788
627
- chrUn_KL568267v1 3782
628
- chrUn_AABR07024228v1 3757
629
- chrUn_AABR07024187v1 3745
630
- chrUn_AABR07024267v1 3745
631
- chrUn_AABR07022707v1 3741
632
- chrUn_KL568247v1 3663
633
- chrUn_KL568496v1 3657
634
- chrUn_KL568339v1 3656
635
- chrUn_KL568327v1 3635
636
- chrUn_KL568392v1 3563
637
- chr1_KL567883v1_random 3546
638
- chrUn_AABR07022511v1 3545
639
- chrUn_KL568287v1 3520
640
- chr8_KL568000v1_random 3475
641
- chr16_AABR07050986v1_random 3473
642
- chrUn_KL568444v1 3439
643
- chrX_KL568124v1_random 3436
644
- chrUn_KL568309v1 3422
645
- chr2_KL567905v1_random 3364
646
- chr14_KL568060v1_random 3352
647
- chr18_KL568094v1_random 3318
648
- chrUn_AABR07024159v1 3318
649
- chr17_AABR07050910v1_random 3308
650
- chrUn_KL568459v1 3288
651
- chrUn_KL568214v1 3273
652
- chr1_AABR07046212v1_random 3264
653
- chr1_AABR07046159v1_random 3224
654
- chrUn_KL568192v1 3219
655
- chr12_KL568034v1_random 3214
656
- chrUn_KL568233v1 3210
657
- chr5_KL567948v1_random 3195
658
- chrUn_KL568311v1 3190
659
- chrUn_KL568183v1 3177
660
- chrUn_KL568401v1 3168
661
- chrUn_KL568213v1 3120
662
- chr15_KL568069v1_random 3057
663
- chrUn_KL568416v1 3052
664
- chrX_AABR07045689v1_random 3045
665
- chrUn_AABR07024290v1 3036
666
- chr12_AABR07051090v1_random 3027
667
- chrUn_KL568368v1 3026
668
- chr1_AABR07046158v1_random 3018
669
- chrUn_KL568220v1 3003
670
- chr1_AABR07046187v1_random 2999
671
- chrUn_KL568207v1 2985
672
- chr1_AABR07046222v1_random 2978
673
- chr16_KL568082v1_random 2971
674
- chr5_KL567955v1_random 2942
675
- chr20_AABR07055056v1_random 2941
676
- chr14_KL568056v1_random 2940
677
- chrUn_KL568291v1 2924
678
- chr17_KL568083v1_random 2923
679
- chr3_KL567929v1_random 2912
680
- chr13_KL568050v1_random 2905
681
- chrUn_AABR07024390v1 2896
682
- chr8_KL567996v1_random 2893
683
- chrUn_AABR07022630v1 2877
684
- chrUn_KL568205v1 2858
685
- chrUn_AABR07022737v1 2840
686
- chr5_AABR07046433v1_random 2834
687
- chrUn_KL568426v1 2831
688
- chr3_AABR07046319v1_random 2826
689
- chrUn_KL568503v1 2826
690
- chrUn_KL568227v1 2774
691
- chrUn_KL568305v1 2760
692
- chrUn_KL568301v1 2759
693
- chrUn_KL568509v1 2750
694
- chrUn_KL568320v1 2745
695
- chr11_KL568027v1_random 2724
696
- chrX_AABR07045776v1_random 2721
697
- chr10_KL568008v1_random 2704
698
- chrUn_KL568172v1 2699
699
- chrUn_KL568294v1 2680
700
- chrX_AABR07045688v1_random 2649
701
- chr20_KL568105v1_random 2619
702
- chrUn_KL568232v1 2600
703
- chr17_AABR07050911v1_random 2566
704
- chrUn_KL568194v1 2533
705
- chrUn_AABR07024397v1 2454
706
- chrUn_KL568378v1 2442
707
- chrUn_AABR07024165v1 2419
708
- chrUn_KL568258v1 2384
709
- chrX_AABR07045766v1_random 2378
710
- chr3_AABR07046296v1_random 2362
711
- chrUn_KL568491v1 2344
712
- chr18_AABR07051126v1_random 2299
713
- chrUn_KL568352v1 2296
714
- chrUn_KL568188v1 2287
715
- chr16_AABR07050959v1_random 2278
716
- chrUn_KL568515v1 2232
717
- chrUn_AABR07022923v1 2226
718
- chrUn_AABR07024399v1 2218
719
- chrUn_AABR07023068v1 2217
720
- chr7_KL567992v1_random 2204
721
- chrUn_KL568252v1 2198
722
- chr7_KL567990v1_random 2196
723
- chr8_AABR07050727v1_random 2164
724
- chrUn_AABR07023168v1 2153
725
- chrUn_KL568171v1 2141
726
- chrUn_KL568231v1 2132
727
- chrUn_KL568178v1 2131
728
- chrUn_KL568435v1 2121
729
- chr1_KL567890v1_random 2119
730
- chrUn_KL568221v1 2110
731
- chrUn_KL568407v1 2094
732
- chr15_KL568065v1_random 2068
733
- chrUn_AABR07022620v1 2057
734
- chrUn_KL568217v1 2047
735
- chrUn_AABR07024045v1 2041
736
- chrUn_KL568262v1 2018
737
- chrUn_KL568168v1 2015
738
- chr16_AABR07050989v1_random 2001
739
- chrUn_KL568244v1 1998
740
- chrUn_KL568241v1 1994
741
- chrUn_AABR07022654v1 1981
742
- chr10_AABR07050887v1_random 1962
743
- chrUn_KL568371v1 1945
744
- chrUn_KL568182v1 1923
745
- chrUn_KL568502v1 1892
746
- chrUn_KL568175v1 1861
747
- chrUn_AABR07022594v1 1852
748
- chrUn_AABR07023325v1 1839
749
- chrUn_AABR07024229v1 1833
750
- chr3_AABR07046267v1_random 1821
751
- chrUn_KL568253v1 1810
752
- chr3_KL567925v1_random 1808
753
- chrUn_KL568500v1 1783
754
- chrUn_KL568240v1 1765
755
- chrUn_KL568184v1 1761
756
- chrUn_KL568278v1 1760
757
- chrUn_KL568308v1 1740
758
- chrUn_KL568243v1 1724
759
- chrUn_KL568210v1 1709
760
- chrUn_KL568222v1 1709
761
- chrUn_KL568276v1 1684
762
- chrUn_KL568429v1 1681
763
- chrUn_KL568239v1 1652
764
- chrUn_KL568385v1 1647
765
- chrX_KL568115v1_random 1634
766
- chrUn_AABR07024323v1 1633
767
- chrUn_KL568209v1 1619
768
- chr7_KL567989v1_random 1608
769
- chr11_KL568023v1_random 1603
770
- chrUn_AABR07024195v1 1593
771
- chrUn_KL568489v1 1590
772
- chrUn_KL568302v1 1571
773
- chrUn_KL568264v1 1570
774
- chrUn_AABR07024204v1 1554
775
- chrUn_AABR07024427v1 1529
776
- chrUn_KL568261v1 1528
777
- chrUn_KL568255v1 1519
778
- chrUn_KL568284v1 1512
779
- chrUn_KL568236v1 1497
780
- chrUn_KL568203v1 1485
781
- chrUn_AABR07024428v1 1455
782
- chrUn_KL568211v1 1424
783
- chrUn_KL568375v1 1421
784
- chrUn_KL568229v1 1413
785
- chrUn_KL568216v1 1404
786
- chrUn_KL568501v1 1397
787
- chr7_AABR07046137v1_random 1393
788
- chrUn_KL568189v1 1389
789
- chrUn_KL568277v1 1370
790
- chr20_AABR07055065v1_random 1347
791
- chrUn_KL568230v1 1324
792
- chrUn_KL568338v1 1318
793
- chrUn_KL568369v1 1310
794
- chrUn_AABR07023968v1 1301
795
- chrUn_KL568504v1 1296
796
- chrUn_AABR07024265v1 1285
797
- chrUn_KL568386v1 1285
798
- chr11_AABR07050825v1_random 1274
799
- chrUn_KL568250v1 1250
800
- chrUn_AABR07024293v1 1238
801
- chrUn_AABR07024332v1 1222
802
- chrUn_KL568249v1 1218
803
- chr5_AABR07046507v1_random 1207
804
- chr11_AABR07050815v1_random 1204
805
- chrUn_KL568298v1 1200
806
- chr18_AABR07051099v1_random 1185
807
- chrUn_KL568506v1 1171
808
- chrUn_KL568494v1 1167
809
- chrUn_KL568508v1 1166
810
- chr3_AABR07046249v1_random 1163
811
- chrUn_KL568269v1 1156
812
- chrUn_AABR07022926v1 1138
813
- chrUn_KL568181v1 1130
814
- chrUn_KL568265v1 1130
815
- chrUn_KL568296v1 1127
816
- chr6_AABR07055042v1_random 1118
817
- chrUn_AABR07024331v1 1116
818
- chr15_AABR07046563v1_random 1113
819
- chrUn_AABR07022299v1 1106
820
- chrUn_AABR07023052v1 1106
821
- chrUn_KL568422v1 1106
822
- chrUn_AABR07024178v1 1101
823
- chrUn_KL568238v1 1101
824
- chrUn_AABR07022871v1 1098
825
- chrUn_AABR07024196v1 1098
826
- chrUn_AABR07022830v1 1094
827
- chrUn_AABR07024374v1 1080
828
- chr7_KL567991v1_random 1075
829
- chrUn_KL568275v1 1066
830
- chrUn_AABR07024221v1 1065
831
- chrUn_AABR07022573v1 1063
832
- chrUn_KL568279v1 1061
833
- chr3_AABR07046243v1_random 1049
834
- chrUn_AABR07024269v1 1048
835
- chr1_AABR07046211v1_random 1042
836
- chr1_AABR07046150v1_random 1041
837
- chrUn_KL568204v1 1028
838
- chrUn_AABR07022857v1 996
839
- chrUn_AABR07024322v1 992
840
- chrUn_AABR07024080v1 991
841
- chrUn_AABR07024160v1 980
842
- chr2_AABR07046014v1_random 955
843
- chrUn_AABR07022517v1 942
844
- chrUn_AABR07024182v1 920
845
- chr11_AABR07050811v1_random 917
846
- chrUn_AABR07024125v1 904
847
- chrUn_AABR07024138v1 897
848
- chr1_AABR07046186v1_random 881
849
- chrUn_AABR07022258v1 875
850
- chrUn_AABR07022378v1 849
851
- chrUn_AABR07024114v1 836
852
- chrUn_AABR07024103v1 832
853
- chrUn_AABR07024007v1 828
854
- chr17_AABR07050916v1_random 825
855
- chrUn_AABR07024395v1 821
856
- chrUn_AABR07022405v1 816
857
- chrUn_AABR07022334v1 815
858
- chrUn_AABR07022616v1 815
859
- chrUn_AABR07023031v1 813
860
- chrUn_AABR07022626v1 804
861
- chrUn_AABR07022627v1 795
862
- chrUn_KL568206v1 795
863
- chrUn_AABR07022608v1 790
864
- chrUn_AABR07023445v1 789
865
- chrUn_AABR07022973v1 786
866
- chrUn_AABR07022342v1 785
867
- chrUn_AABR07023067v1 774
868
- chrUn_AABR07022531v1 766
869
- chrX_AABR07045742v1_random 766
870
- chrUn_AABR07022905v1 763
871
- chr8_AABR07050689v1_random 760
872
- chrUn_AABR07022404v1 754
873
- chrUn_AABR07024223v1 754
874
- chrUn_AABR07023024v1 748
875
- chrUn_AABR07022350v1 745
876
- chrUn_AABR07024383v1 744
877
- chr17_AABR07050912v1_random 743
878
- chrUn_AABR07022934v1 743
879
- chr16_AABR07050985v1_random 742
880
- chrUn_AABR07022759v1 741
881
- chrUn_AABR07022729v1 740
882
- chrUn_AABR07024396v1 736
883
- chrUn_AABR07022336v1 723
884
- chrUn_AABR07022359v1 723
885
- chrUn_AABR07024371v1 721
886
- chrUn_AABR07022264v1 714
887
- chrUn_AABR07022304v1 714
888
- chrX_AABR07045681v1_random 712
889
- chrUn_AABR07024319v1 708
890
- chrUn_AABR07022672v1 706
891
- chrUn_AABR07022279v1 704
892
- chrX_AABR07045743v1_random 702
893
- chrUn_AABR07022284v1 700
894
- chrUn_AABR07024227v1 693
895
- chrUn_AABR07024289v1 692
896
- chrUn_AABR07022416v1 691
897
- chrUn_AABR07022676v1 690
898
- chrUn_AABR07022287v1 683
899
- chr4_AABR07046405v1_random 682
900
- chrUn_AABR07022684v1 681
901
- chrUn_AABR07024294v1 678
902
- chrUn_AABR07022265v1 675
903
- chrUn_AABR07024393v1 673
904
- chrUn_AABR07022907v1 670
905
- chrUn_AABR07024092v1 669
906
- chr5_KL567956v1_random 667
907
- chrUn_AABR07022259v1 667
908
- chrUn_AABR07024349v1 666
909
- chrUn_AABR07024005v1 665
910
- chrUn_AABR07024043v1 665
911
- chrUn_AABR07022828v1 664
912
- chrUn_AABR07022519v1 663
913
- chrUn_AABR07022619v1 663
914
- chr1_AABR07046182v1_random 659
915
- chrUn_AABR07024189v1 659
916
- chrUn_AABR07022760v1 658
917
- chrUn_AABR07024006v1 657
918
- chrUn_AABR07023321v1 656
919
- chrX_KL568119v1_random 655
920
- chrUn_AABR07022335v1 654
921
- chrUn_AABR07022266v1 650
922
- chrUn_AABR07022921v1 649
923
- chrUn_AABR07023534v1 647
924
- chrUn_AABR07022881v1 642
925
- chrUn_AABR07022993v1 642
926
- chrUn_AABR07022367v1 641
927
- chrUn_AABR07024433v1 637
928
- chrUn_AABR07024351v1 628
929
- chrUn_AABR07022263v1 626
930
- chrUn_AABR07022990v1 622
931
- chr3_AABR07046248v1_random 619
932
- chrUn_AABR07022827v1 619
933
- chrUn_AABR07022884v1 614
934
- chrUn_AABR07022629v1 613
935
- chrUn_AABR07024320v1 613
936
- chrUn_AABR07022559v1 609
937
- chrUn_AABR07022239v1 607
938
- chrUn_AABR07022428v1 605
939
- chrUn_AABR07024177v1 602
940
- chrUn_AABR07024266v1 594
941
- chrUn_AABR07023560v1 592
942
- chr10_AABR07050894v1_random 590
943
- chrUn_AABR07022726v1 588
944
- chrUn_AABR07022738v1 588
945
- chr8_AABR07050661v1_random 586
946
- chrUn_AABR07024121v1 586
947
- chrUn_AABR07022300v1 584
948
- chr12_AABR07051089v1_random 580
949
- chrUn_AABR07024432v1 579
950
- chrUn_AABR07022880v1 577
951
- chrUn_AABR07022957v1 575
952
- chr18_AABR07051098v1_random 572
953
- chr7_KL567979v1_random 569
954
- chrUn_AABR07024304v1 568
955
- chr3_AABR07046283v1_random 567
956
- chrUn_AABR07022922v1 567
957
- chrUn_AABR07022337v1 564
958
- chrUn_AABR07022671v1 563
959
- chrUn_AABR07022257v1 562
960
- chrUn_AABR07022783v1 560
961
- chrUn_AABR07022425v1 559
962
- chrUn_AABR07024194v1 559
963
- chrUn_AABR07022273v1 556
964
- chrUn_AABR07022504v1 555
965
- chrUn_AABR07022368v1 552
966
- chrUn_AABR07024226v1 550
967
- chrUn_AABR07022829v1 549
968
- chr10_AABR07050850v1_random 548
969
- chrUn_AABR07022621v1 547
970
- chrUn_AABR07022628v1 535
971
- chrUn_AABR07022431v1 534
972
- chr7_AABR07046034v1_random 530
973
- chrUn_AABR07022478v1 530
974
- chrUn_AABR07022753v1 529
975
- chrUn_AABR07023014v1 529
976
- chrUn_AABR07022994v1 526
977
- chr7_AABR07046019v1_random 523
978
- chrUn_AABR07022645v1 523
979
- chrUn_AABR07022288v1 522
980
- chrUn_AABR07022802v1 521
981
- chr9_AABR07051154v1_random 520
982
- chrUn_AABR07023967v1 516
983
- chr2_AABR07045875v1_random 515
984
- chrUn_AABR07022920v1 515
985
- chrUn_AABR07023949v1 515
986
- chrUn_AABR07024100v1 507
987
- chrUn_AABR07022479v1 503
988
- chrUn_AABR07022532v1 503
989
- chrUn_AABR07023324v1 503
990
- chrUn_AABR07022793v1 493
991
- chrUn_AABR07022301v1 482
992
- chrUn_AABR07022906v1 453
993
- chrUn_AABR07022514v1 450
994
- chrUn_AABR07022298v1 428
995
- chrUn_AABR07022333v1 391
996
- chrUn_AABR07022456v1 351
997
- chrUn_AABR07022885v1 265
998
- chrUn_AABR07022944v1 238
999
- chrUn_AABR07024268v1 230`
1000
- }
1
+ "use strict";
2
+ Object.defineProperty(exports, "__esModule", { value: true });
3
+ exports.default = {
4
+ species: 'rat',
5
+ genomefile: 'genomes/rn6.gz',
6
+ genedb: {
7
+ dbfile: 'anno/genes.rn6.db'
8
+ },
9
+ tracks: [
10
+ {
11
+ __isgene: true,
12
+ translatecoding: true,
13
+ file: 'anno/ncbiRefSeq.rn6.gz',
14
+ type: 'bedj',
15
+ name: 'RefGene',
16
+ stackheight: 16,
17
+ stackspace: 1,
18
+ vpad: 4,
19
+ color: '#1D591D'
20
+ },
21
+ {
22
+ type: 'bedj',
23
+ name: 'RepeatMasker',
24
+ stackheight: 14,
25
+ file: 'anno/rmsk.rn6.gz',
26
+ onerow: true,
27
+ categories: {
28
+ SINE: { color: '#ED8C8E', label: 'SINE' },
29
+ LINE: { color: '#EDCB8C', label: 'LINE' },
30
+ LTR: { color: '#E38CED', label: 'LTR' },
31
+ DNA: { color: '#8C8EED', label: 'DNA transposon' },
32
+ simple: { color: '#8EB88C', label: 'Simple repeats' },
33
+ low_complexity: { color: '#ACEBA9', label: 'Low complexity' },
34
+ satellite: { color: '#B59A84', label: 'Satellite' },
35
+ RNA: { color: '#9DE0E0', label: 'RNA repeat' },
36
+ other: { color: '#9BADC2', label: 'Other' },
37
+ unknown: { color: '#858585', label: 'Unknown' }
38
+ }
39
+ }
40
+ ],
41
+ defaultcoord: {
42
+ chr: 'chr6',
43
+ start: 77607000,
44
+ stop: 77625000,
45
+ gene: 'Pax9'
46
+ },
47
+ majorchr: "chr1\t282763074\nchr2\t266435125\nchr4\t184226339" /* pragma: allowlist secret */ + "\nchr3\t177699992\nchr5\t173707219\nchrX\t159970021\nchr6\t147991367\nchr7\t145729302\nchr8\t133307652\nchr9\t122095297\nchr14\t115493446\nchr13\t114033958\nchr10\t112626471\nchr15\t111246239\nchr17\t90843779\nchr16\t90668790\nchr11\t90463843\nchr18\t88201929\nchr19\t62275575\nchr20\t56205956\nchr12\t52716770\nchrY\t3310458",
48
+ minorchr: "\nchrY_KL568162v1_random\t10937627\nchrY_KL568139v1_random\t9752924\nchrY_KL568161v1_random\t7627431\nchrY_KL568148v1_random\t6483517\nchrY_KL568157v1_random\t5447879\nchrY_KL568160v1_random\t4317250\nchrY_KL568151v1_random\t3931032\nchrY_KL568149v1_random\t3292674\nchrY_KL568141v1_random\t2733323\nchrY_KL568156v1_random\t2193381\nchrY_KL568159v1_random\t1977169\nchrY_KL568155v1_random\t1365599\nchrY_KL568140v1_random\t1351663\nchrY_KL568158v1_random\t1284477\nchrY_KL568152v1_random\t1069101\nchrY_KL568164v1_random\t1009277\nchrY_KL568150v1_random\t866433\nchrY_KL568163v1_random\t753291\nchrUn_KL568473v1\t555557\nchrY_KL568147v1_random\t464092\nchrUn_KL568409v1\t409149\nchrY_KL568165v1_random\t398163\nchrY_KL568143v1_random\t343819\nchrUn_KL568374v1\t333641\nchrY_KL568142v1_random\t332284\nchrUn_KL568418v1\t276968\nchrUn_KL568451v1\t259454\nchrUn_KL568353v1\t246307\nchrY_KL568153v1_random\t239643\nchr4_KL567939v1_random\t227955\nchrY_KL568154v1_random\t215559\nchrY_KL568144v1_random\t209128\nchrUn_KL568410v1\t197620\nchrY_KL568166v1_random\t188438\nchrY_KL568145v1_random\t180016\nchrUn_KL568458v1\t179901\nchrUn_KL568432v1\t170578\nchrUn_KL568465v1\t161686\nchrUn_AABR07024382v1\t161493\nchrUn_AABR07024188v1\t156216\nchrUn_KL568405v1\t151075\nchrUn_KL568487v1\t150036\nchrUn_KL568449v1\t148379\nchr5_KL567959v1_random\t147722\nchrUn_KL568438v1\t140435\nchrUn_AABR07024291v1\t140190\nchrUn_KL568414v1\t134730\nchrUn_AABR07024047v1\t128550\nchrUn_KL568318v1\t125475\nchrUn_KL568447v1\t122693\nchrUn_KL568446v1\t122070\nchrY_KL568146v1_random\t122062\nchrUn_KL568319v1\t119946\nchrUn_KL568468v1\t117679\nchrUn_KL568413v1\t115560\nchrUn_KL568354v1\t113311\nchrUn_KL568362v1\t110326\nchrUn_KL568415v1\t110043\nchrUn_KL568421v1\t106580\nchr9_KL568003v1_random\t104398\nchrUn_KL568434v1\t100599\nchr3_KL567919v1_random\t100126\nchrUn_AABR07024421v1\t97361\nchrUn_KL568482v1\t97190\nchrUn_KL568460v1\t96610\nchrUn_AABR07024203v1\t96120\nchr8_KL568001v1_random\t95634\nchrUn_KL568315v1\t91871\nchrUn_KL568336v1\t91174\nchrUn_KL568366v1\t89457\nchrUn_KL568334v1\t86017\nchrUn_KL568379v1\t85300\nchrUn_KL568346v1\t83525\nchrUn_AABR07024124v1\t82313\nchrUn_KL568419v1\t82153\nchrUn_KL568450v1\t81653\nchrUn_KL568328v1\t79909\nchrUn_KL568477v1\t79564\nchrUn_KL568470v1\t78834\nchrUn_KL568360v1\t78647\nchrUn_KL568377v1\t78358\nchrUn_KL568463v1\t78222\nchr4_KL567940v1_random\t77814\nchr15_KL568067v1_random\t76800\nchrUn_KL568454v1\t75706\nchrUn_KL568397v1\t75068\nchrX_KL568125v1_random\t72847\nchrUn_KL568388v1\t70933\nchrUn_KL568337v1\t70310\nchrUn_KL568412v1\t69990\nchrX_KL568126v1_random\t69551\nchr7_KL567994v1_random\t69252\nchrUn_KL568398v1\t68568\nchrUn_AABR07024145v1\t68209\nchrUn_AABR07024104v1\t66549\nchr4_KL567946v1_random\t66194\nchrUn_KL568324v1\t66040\nchrUn_KL568464v1\t65989\nchrUn_AABR07024039v1\t65089\nchrUn_KL568381v1\t64584\nchrUn_KL568440v1\t62701\nchrUn_AABR07024031v1\t62230\nchrUn_KL568417v1\t62095\nchr2_KL567908v1_random\t61811\nchrUn_KL568443v1\t61029\nchr13_KL568051v1_random\t60838\nchr19_KL568101v1_random\t59862\nchr3_KL567926v1_random\t59501\nchrUn_KL568423v1\t57880\nchr18_KL568097v1_random\t57850\nchr2_KL567914v1_random\t57161\nchrUn_KL568453v1\t56678\nchr4_KL567947v1_random\t56466\nchrUn_KL568395v1\t56177\nchrUn_KL568445v1\t55656\nchrUn_KL568430v1\t55205\nchrUn_KL568325v1\t54929\nchrUn_AABR07024102v1\t54789\nchr4_KL567941v1_random\t54041\nchr2_KL567907v1_random\t53909\nchr1_KL567891v1_random\t53404\nchr19_KL568102v1_random\t53245\nchrUn_AABR07024120v1\t52816\nchrUn_KL568424v1\t52566\nchrUn_KL568355v1\t51892\nchrUn_KL568433v1\t51123\nchr16_KL568080v1_random\t49795\nchrX_KL568114v1_random\t49370\nchrUn_KL568282v1\t48841\nchr9_KL568005v1_random\t48638\nchr11_KL568019v1_random\t48508\nchrX_KL568137v1_random\t47458\nchrUn_KL568462v1\t47307\nchrUn_KL568344v1\t47276\nchr2_KL567901v1_random\t46970\nchrUn_KL568467v1\t46639\nchrUn_KL568408v1\t46319\nchrUn_KL568342v1\t46249\nchr16_KL568079v1_random\t45872\nchrUn_KL568370v1\t45784\nchr18_KL568096v1_random\t45622\nchrUn_KL568472v1\t45419\nchrUn_KL568431v1\t45117\nchr20_KL568108v1_random\t44883\nchrUn_KL568350v1\t44681\nchrUn_KL568466v1\t44605\nchrUn_AABR07024398v1\t44505\nchrUn_AABR07024066v1\t44061\nchrUn_KL568461v1\t43373\nchrX_KL568118v1_random\t42845\nchrUn_KL568357v1\t42088\nchrUn_AABR07024106v1\t41833\nchrUn_KL568480v1\t41802\nchrX_KL568136v1_random\t41179\nchr13_KL568045v1_random\t40838\nchr5_KL567951v1_random\t40651\nchrX_KL568116v1_random\t40570\nchrUn_KL568364v1\t40094\nchr7_KL567984v1_random\t39602\nchr15_KL568064v1_random\t39113\nchrUn_KL568292v1\t38332\nchrUn_KL568479v1\t38297\nchr7_KL567981v1_random\t38234\nchrUn_KL568361v1\t38115\nchrUn_KL568471v1\t37571\nchrUn_KL568510v1\t37283\nchr8_KL567997v1_random\t36789\nchrUn_KL568402v1\t36615\nchrUn_KL568452v1\t36554\nchr7_KL567988v1_random\t36409\nchrUn_KL568483v1\t36071\nchrUn_KL568345v1\t35857\nchrUn_AABR07024042v1\t35846\nchrUn_KL568442v1\t35498\nchr14_KL568057v1_random\t35355\nchr11_KL568029v1_random\t35203\nchrUn_KL56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85\nchrUn_AABR07024428v1\t1455\nchrUn_KL568211v1\t1424\nchrUn_KL568375v1\t1421\nchrUn_KL568229v1\t1413\nchrUn_KL568216v1\t1404\nchrUn_KL568501v1\t1397\nchr7_AABR07046137v1_random\t1393\nchrUn_KL568189v1\t1389\nchrUn_KL568277v1\t1370\nchr20_AABR07055065v1_random\t1347\nchrUn_KL568230v1\t1324\nchrUn_KL568338v1\t1318\nchrUn_KL568369v1\t1310\nchrUn_AABR07023968v1\t1301\nchrUn_KL568504v1\t1296\nchrUn_AABR07024265v1\t1285\nchrUn_KL568386v1\t1285\nchr11_AABR07050825v1_random\t1274\nchrUn_KL568250v1\t1250\nchrUn_AABR07024293v1\t1238\nchrUn_AABR07024332v1\t1222\nchrUn_KL568249v1\t1218\nchr5_AABR07046507v1_random\t1207\nchr11_AABR07050815v1_random\t1204\nchrUn_KL568298v1\t1200\nchr18_AABR07051099v1_random\t1185\nchrUn_KL568506v1\t1171\nchrUn_KL568494v1\t1167\nchrUn_KL568508v1\t1166\nchr3_AABR07046249v1_random\t1163\nchrUn_KL568269v1\t1156\nchrUn_AABR07022926v1\t1138\nchrUn_KL568181v1\t1130\nchrUn_KL568265v1\t1130\nchrUn_KL568296v1\t1127\nchr6_AABR07055042v1_random\t1118\nchrUn_AABR07024331v1\t1116\nchr15_AABR07046563v1_random\t1113\nchrUn_AABR07022299v1\t1106\nchrUn_AABR07023052v1\t1106\nchrUn_KL568422v1\t1106\nchrUn_AABR07024178v1\t1101\nchrUn_KL568238v1\t1101\nchrUn_AABR07022871v1\t1098\nchrUn_AABR07024196v1\t1098\nchrUn_AABR07022830v1\t1094\nchrUn_AABR07024374v1\t1080\nchr7_KL567991v1_random\t1075\nchrUn_KL568275v1\t1066\nchrUn_AABR07024221v1\t1065\nchrUn_AABR07022573v1\t1063\nchrUn_KL568279v1\t1061\nchr3_AABR07046243v1_random\t1049\nchrUn_AABR07024269v1\t1048\nchr1_AABR07046211v1_random\t1042\nchr1_AABR07046150v1_random\t1041\nchrUn_KL568204v1\t1028\nchrUn_AABR07022857v1\t996\nchrUn_AABR07024322v1\t992\nchrUn_AABR07024080v1\t991\nchrUn_AABR07024160v1\t980\nchr2_AABR07046014v1_random\t955\nchrUn_AABR07022517v1\t942\nchrUn_AABR07024182v1\t920\nchr11_AABR07050811v1_random\t917\nchrUn_AABR07024125v1\t904\nchrUn_AABR07024138v1\t897\nchr1_AABR07046186v1_random\t881\nchrUn_AABR07022258v1\t875\nchrUn_AABR07022378v1\t849\nchrUn_AABR07024114v1\t836\nchrUn_AABR07024103v1\t832\nchrUn_AABR07024007v1\t828\nchr17_AABR07050916v1_random\t825\nchrUn_AABR07024395v1\t821\nchrUn_AABR07022405v1\t816\nchrUn_AABR07022334v1\t815\nchrUn_AABR07022616v1\t815\nchrUn_AABR07023031v1\t813\nchrUn_AABR07022626v1\t804\nchrUn_AABR07022627v1\t795\nchrUn_KL568206v1\t795\nchrUn_AABR07022608v1\t790\nchrUn_AABR07023445v1\t789\nchrUn_AABR07022973v1\t786\nchrUn_AABR07022342v1\t785\nchrUn_AABR07023067v1\t774\nchrUn_AABR07022531v1\t766\nchrX_AABR07045742v1_random\t766\nchrUn_AABR07022905v1\t763\nchr8_AABR07050689v1_random\t760\nchrUn_AABR07022404v1\t754\nchrUn_AABR07024223v1\t754\nchrUn_AABR07023024v1\t748\nchrUn_AABR07022350v1\t745\nchrUn_AABR07024383v1\t744\nchr17_AABR07050912v1_random\t743\nchrUn_AABR07022934v1\t743\nchr16_AABR07050985v1_random\t742\nchrUn_AABR07022759v1\t741\nchrUn_AABR07022729v1\t740\nchrUn_AABR07024396v1\t736\nchrUn_AABR07022336v1\t723\nchrUn_AABR07022359v1\t723\nchrUn_AABR07024371v1\t721\nchrUn_AABR07022264v1\t714\nchrUn_AABR07022304v1\t714\nchrX_AABR07045681v1_random\t712\nchrUn_AABR07024319v1\t708\nchrUn_AABR07022672v1\t706\nchrUn_AABR07022279v1\t704\nchrX_AABR07045743v1_random\t702\nchrUn_AABR07022284v1\t700\nchrUn_AABR07024227v1\t693\nchrUn_AABR07024289v1\t692\nchrUn_AABR07022416v1\t691\nchrUn_AABR07022676v1\t690\nchrUn_AABR07022287v1\t683\nchr4_AABR07046405v1_random\t682\nchrUn_AABR07022684v1\t681\nchrUn_AABR07024294v1\t678\nchrUn_AABR07022265v1\t675\nchrUn_AABR07024393v1\t673\nchrUn_AABR07022907v1\t670\nchrUn_AABR07024092v1\t669\nchr5_KL567956v1_random\t667\nchrUn_AABR07022259v1\t667\nchrUn_AABR07024349v1\t666\nchrUn_AABR07024005v1\t665\nchrUn_AABR07024043v1\t665\nchrUn_AABR07022828v1\t664\nchrUn_AABR07022519v1\t663\nchrUn_AABR07022619v1\t663\nchr1_AABR07046182v1_random\t659\nchrUn_AABR07024189v1\t659\nchrUn_AABR07022760v1\t658\nchrUn_AABR07024006v1\t657\nchrUn_AABR07023321v1\t656\nchrX_KL568119v1_random\t655\nchrUn_AABR07022335v1\t654\nchrUn_AABR07022266v1\t650\nchrUn_AABR07022921v1\t649\nchrUn_AABR07023534v1\t647\nchrUn_AABR07022881v1\t642\nchrUn_AABR07022993v1\t642\nchrUn_AABR07022367v1\t641\nchrUn_AABR07024433v1\t637\nchrUn_AABR07024351v1\t628\nchrUn_AABR07022263v1\t626\nchrUn_AABR07022990v1\t622\nchr3_AABR07046248v1_random\t619\nchrUn_AABR07022827v1\t619\nchrUn_AABR07022884v1\t614\nchrUn_AABR07022629v1\t613\nchrUn_AABR07024320v1\t613\nchrUn_AABR07022559v1\t609\nchrUn_AABR07022239v1\t607\nchrUn_AABR07022428v1\t605\nchrUn_AABR07024177v1\t602\nchrUn_AABR07024266v1\t594\nchrUn_AABR07023560v1\t592\nchr10_AABR07050894v1_random\t590\nchrUn_AABR07022726v1\t588\nchrUn_AABR07022738v1\t588\nchr8_AABR07050661v1_random\t586\nchrUn_AABR07024121v1\t586\nchrUn_AABR07022300v1\t584\nchr12_AABR07051089v1_random\t580\nchrUn_AABR07024432v1\t579\nchrUn_AABR07022880v1\t577\nchrUn_AABR07022957v1\t575\nchr18_AABR07051098v1_random\t572\nchr7_KL567979v1_random\t569\nchrUn_AABR07024304v1\t568\nchr3_AABR07046283v1_random\t567\nchrUn_AABR07022922v1\t567\nchrUn_AABR07022337v1\t564\nchrUn_AABR07022671v1\t563\nchrUn_AABR07022257v1\t562\nchrUn_AABR07022783v1\t560\nchrUn_AABR07022425v1\t559\nchrUn_AABR07024194v1\t559\nchrUn_AABR07022273v1\t556\nchrUn_AABR07022504v1\t555\nchrUn_AABR07022368v1\t552\nchrUn_AABR07024226v1\t550\nchrUn_AABR07022829v1\t549\nchr10_AABR07050850v1_random\t548\nchrUn_AABR07022621v1\t547\nchrUn_AABR07022628v1\t535\nchrUn_AABR07022431v1\t534\nchr7_AABR07046034v1_random\t530\nchrUn_AABR07022478v1\t530\nchrUn_AABR07022753v1\t529\nchrUn_AABR07023014v1\t529\nchrUn_AABR07022994v1\t526\nchr7_AABR07046019v1_random\t523\nchrUn_AABR07022645v1\t523\nchrUn_AABR07022288v1\t522\nchrUn_AABR07022802v1\t521\nchr9_AABR07051154v1_random\t520\nchrUn_AABR07023967v1\t516\nchr2_AABR07045875v1_random\t515\nchrUn_AABR07022920v1\t515\nchrUn_AABR07023949v1\t515\nchrUn_AABR07024100v1\t507\nchrUn_AABR07022479v1\t503\nchrUn_AABR07022532v1\t503\nchrUn_AABR07023324v1\t503\nchrUn_AABR07022793v1\t493\nchrUn_AABR07022301v1\t482\nchrUn_AABR07022906v1\t453\nchrUn_AABR07022514v1\t450\nchrUn_AABR07022298v1\t428\nchrUn_AABR07022333v1\t391\nchrUn_AABR07022456v1\t351\nchrUn_AABR07022885v1\t265\nchrUn_AABR07022944v1\t238\nchrUn_AABR07024268v1\t230"
49
+ };