@sjcrh/proteinpaint-client 2.212.0 → 2.213.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (864) hide show
  1. package/dist/2dmaf-3FDGCUTK.js +1367 -0
  2. package/dist/AggMatrixInput-QA2FHMSY.js +406 -0
  3. package/dist/AggregateMatrix-XGVKDN2K.js +41 -0
  4. package/dist/AppHeader-NVLHCOVU.js +830 -0
  5. package/dist/BoxPlot-IVO7VBQZ.js +1208 -0
  6. package/dist/CorrelationVolcano-2XD5OH2S.js +617 -0
  7. package/dist/Cuminc-ECQ56PKO.js +1220 -0
  8. package/dist/DE-KWA2K24U.js +89 -0
  9. package/dist/DEinput-ZP6CYIRN.js +501 -0
  10. package/dist/DM-ME7CCC4E.js +90 -0
  11. package/dist/DifferentialAnalysis-6SIKR566.js +239 -0
  12. package/dist/Disco-LVRT7T3B.js +3389 -0
  13. package/dist/Disco.UI-GT64ZEK4.js +243 -0
  14. package/dist/DmrPlot-ZZYKJ4UH.js +362 -0
  15. package/dist/GB-WR6SENAZ.js +1392 -0
  16. package/dist/GSEA-U2GFOHWT.js +875 -0
  17. package/dist/GeneExpInput-CQSORTKI.js +42 -0
  18. package/dist/Geomap-CGJ7EIMD.js +84 -0
  19. package/dist/HicApp-DS3HC2G5.js +2245 -0
  20. package/dist/IDCViewer-6KWSZWZ7.js +10812 -0
  21. package/dist/NumBinaryEditor-BQVR2RDS.js +279 -0
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  23. package/dist/NumContEditor-6T6XFLAM.js +105 -0
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  25. package/dist/NumCustomBinEditor-Q2GJOFOH.js +33 -0
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  27. package/dist/NumDiscreteEditor-QFKPIRDW.js +170 -0
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  29. package/dist/NumRegularBinEditor-SLFPSTA3.js +33 -0
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  31. package/dist/NumSplineEditor-AEXNF6E4.js +210 -0
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  37. package/dist/ProteomeInput-AC5TRXHE.js +388 -0
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  44. package/dist/adSandbox-HZROPAPC.js +33 -0
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  54. package/dist/block.mds.expressionrank-W6GIHAAL.js +354 -0
  55. package/dist/block.mds.geneboxplot-GBP5N7AU.js +823 -0
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  73. package/dist/bubbleHeatmap-R2CNWOAJ.js +378 -0
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  142. package/dist/cohort-J3JNIMCT.js +70 -0
  143. package/dist/condition-A6VAD4OS.js +327 -0
  144. package/dist/controls-2R2OQAX2.js +34 -0
  145. package/dist/controls.btns-6AKLIWOG.js +9 -0
  146. package/dist/controls.config-UPE6TAHK.js +34 -0
  147. package/dist/correlation-Q6HYOUOX.js +95 -0
  148. package/dist/customdata.inputui-KQJKSQNI.js +284 -0
  149. package/dist/dataDownload-PYQX2BWN.js +329 -0
  150. package/dist/databrowser.ui-LPFKGVW3.js +425 -0
  151. package/dist/dictionary-GYN7OXWQ.js +113 -0
  152. package/dist/dnaMethylation-TSRHGNNY.js +33 -0
  153. package/dist/dnaMethylation.integration.spec-3YYSFVKK.js +198 -0
  154. package/dist/dofetch-4YRJUWLJ.js +48 -0
  155. package/dist/e2pca-G4AVRHQC.js +344 -0
  156. package/dist/ep-MHT3CLGK.js +1249 -0
  157. package/dist/expclust.gdc.spec-2TWLDD2S.js +302 -0
  158. package/dist/facet-4O65ZSBQ.js +519 -0
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  161. package/dist/geneExpClustering-LOLLER5C.js +244 -0
  162. package/dist/geneExpression-NP2N4CRU.js +310 -0
  163. package/dist/geneExpression-RWE7PBBD.js +33 -0
  164. package/dist/geneExpression.unit.spec-MBE6YVKY.js +128 -0
  165. package/dist/geneORA-ZWZCCBL7.js +273 -0
  166. package/dist/geneRanking-UZXH5SLT.js +548 -0
  167. package/dist/geneVariant-MULXYJ7M.js +36 -0
  168. package/dist/geneVariant-ZPINPLRP.js +289 -0
  169. package/dist/geneVariant.integration.spec-6DNKP22T.js +503 -0
  170. package/dist/genefusion.ui-S4BPNRIO.js +303 -0
  171. package/dist/geneset-LZNALH2H.js +203 -0
  172. package/dist/genomeBrowser.spec-JOIKBWVC.js +276 -0
  173. package/dist/grin2-GFZ5REPY.js +949 -0
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  175. package/dist/hierCluster-DCESQECE.js +55 -0
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  177. package/dist/hierCluster.config-DBQYJXML.js +36 -0
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  179. package/dist/hierCluster.interactivity-EKKKYVEP.js +49 -0
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  187. package/dist/leftlabel.sample-CRMQSNCJ.js +258 -0
  188. package/dist/lollipop-XLPUIZBA.js +166 -0
  189. package/dist/maf-LPXQMGJC.js +455 -0
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  206. package/dist/mds.samplescatterplot-W3TCPYHS.js +1545 -0
  207. package/dist/mds.survivalplot-EYAA5IO3.js +477 -0
  208. package/dist/multivalue-GGM5DFPD.js +83 -0
  209. package/dist/oncomatrix-MVLDAB6I.js +290 -0
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  220. package/dist/profileForms-WU7UNK7Y.js +941 -0
  221. package/dist/profilePlot-KW7UITCT.js +49 -0
  222. package/dist/proteinView-ET75MKLU.js +1357 -0
  223. package/dist/proteomeCohortCompare-SDX5D26O.js +912 -0
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  829. /package/dist/{studyCatalog-X2IGVJ26.js.map → studyCatalog-OAGHQXKY.js.map} +0 -0
  830. /package/dist/{summarizeCnvGeneexp-H7A5SI3R.js.map → summarizeCnvGeneexp-K6XO5YEP.js.map} +0 -0
  831. /package/dist/{summarizeGeneexpSurvival-GJF6VD2S.js.map → summarizeGeneexpSurvival-WTAGCCU4.js.map} +0 -0
  832. /package/dist/{summarizeMutationCnv-WQLMD2TR.js.map → summarizeMutationCnv-QKIDS3LI.js.map} +0 -0
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  864. /package/dist/{wsi.direct-Z5YUZEXG.js.map → wsi.direct-J4SNIUUW.js.map} +0 -0
package/dist/grin2-KXMSYYYM.js DELETED
@@ -1,70 +0,0 @@
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- import {
2
- appInit
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- } from "./chunk-A4D2Z2LV.js";
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- import "./chunk-5WMFEMII.js";
5
- import "./chunk-X46YA4CB.js";
6
- import "./chunk-SKMFMGCD.js";
7
- import {
8
- vocabInit
9
- } from "./chunk-VHDYIOWU.js";
10
- import "./chunk-HJ6L54YS.js";
11
- import "./chunk-KV4W2ACA.js";
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- import "./chunk-5WIA4KFA.js";
13
- import "./chunk-7XZA2XR2.js";
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- import "./chunk-DD3DWHUY.js";
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- import "./chunk-EEB5VE2A.js";
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- import "./chunk-6RRZRISL.js";
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- import "./chunk-2KM4PRQM.js";
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- import "./chunk-RMUK3TLD.js";
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- import "./chunk-HH5JKOE6.js";
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- import "./chunk-RU2UHH7M.js";
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- import "./chunk-57Z4VYLM.js";
22
- import {
23
- copyMerge
24
- } from "./chunk-WINIL2KN.js";
25
- import "./chunk-PF4DSFDR.js";
26
- import "./chunk-7X6NF7NI.js";
27
- import "./chunk-W5J3LTYS.js";
28
- import "./chunk-Z2ZITHT4.js";
29
- import "./chunk-4OLM3KSB.js";
30
- import "./chunk-6XKAOSQE.js";
31
- import "./chunk-TLT4YIG3.js";
32
- import "./chunk-5R63Q5KH.js";
33
- import {
34
- select_default
35
- } from "./chunk-I6Y4O3RR.js";
36
- import "./chunk-Q5RDQNIT.js";
37
- import "./chunk-DQC5FFGV.js";
38
- import "./chunk-HS5PO5ZQ.js";
39
-
40
- // gdc/grin2.ts
41
- async function gdcGRIN2ui(arg, _holder, genomes) {
42
- const toolGenome = arg.genome || "hg38";
43
- const toolDslabel = arg.dslabel || "GDC";
44
- const genome = genomes[toolGenome];
45
- if (!genome) throw toolGenome + " missing";
46
- if (arg.filter0 && typeof arg.filter0 != "object") throw "arg.filter0 not object";
47
- const vocabApi = await vocabInit({
48
- state: { vocab: { genome: toolGenome, dslabel: toolDslabel } }
49
- });
50
- vocabApi.getTermdbConfig();
51
- const plotAppApi = await appInit({
52
- holder: select_default(arg.holder).select(".sja_root_holder"),
53
- genome,
54
- state: copyMerge(
55
- {
56
- genome: toolGenome,
57
- dslabel: toolDslabel,
58
- termfilter: { filter0: arg.filter0 },
59
- plots: [{ chartType: "grin2" }]
60
- },
61
- arg.state || {}
62
- ),
63
- app: arg.opts?.app || {}
64
- });
65
- return plotAppApi;
66
- }
67
- export {
68
- gdcGRIN2ui
69
- };
70
- //# sourceMappingURL=grin2-KXMSYYYM.js.map
package/dist/hierCluster-2HFMEHAD.js DELETED
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- import {
2
- HierCluster,
3
- componentInit,
4
- hierClusterInit
5
- } from "./chunk-232OR2PG.js";
6
- import {
7
- getPlotConfig
8
- } from "./chunk-UFQDWGZU.js";
9
- import "./chunk-5U7AYOEZ.js";
10
- import "./chunk-OSYSJHAA.js";
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- import "./chunk-4S7TWVOY.js";
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- import "./chunk-HYOCZPKO.js";
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- import "./chunk-E24IUWHH.js";
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- import "./chunk-753GDKSC.js";
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- import "./chunk-7AOA5WZY.js";
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- import "./chunk-DVWCDEN3.js";
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- import "./chunk-TGKWEAUE.js";
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- import "./chunk-N6NL4XG2.js";
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- import "./chunk-HL5B4NME.js";
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- import "./chunk-C2MCQZWH.js";
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- import "./chunk-DDKS3MV3.js";
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- import "./chunk-PFRPC2SY.js";
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- import "./chunk-I6P4LZP3.js";
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- import "./chunk-JZQEDIGZ.js";
25
- import "./chunk-G4A3ZDDS.js";
26
- import "./chunk-V2OJLJSK.js";
27
- import "./chunk-VHDYIOWU.js";
28
- import "./chunk-HJ6L54YS.js";
29
- import "./chunk-KV4W2ACA.js";
30
- import "./chunk-5WIA4KFA.js";
31
- import "./chunk-7XZA2XR2.js";
32
- import "./chunk-DD3DWHUY.js";
33
- import "./chunk-EEB5VE2A.js";
34
- import "./chunk-6RRZRISL.js";
35
- import "./chunk-2KM4PRQM.js";
36
- import "./chunk-RMUK3TLD.js";
37
- import "./chunk-HH5JKOE6.js";
38
- import "./chunk-RU2UHH7M.js";
39
- import "./chunk-57Z4VYLM.js";
40
- import "./chunk-WINIL2KN.js";
41
- import "./chunk-PF4DSFDR.js";
42
- import "./chunk-7X6NF7NI.js";
43
- import "./chunk-W5J3LTYS.js";
44
- import "./chunk-Z2ZITHT4.js";
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- import "./chunk-4OLM3KSB.js";
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- import "./chunk-6XKAOSQE.js";
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- import "./chunk-TLT4YIG3.js";
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- import "./chunk-5R63Q5KH.js";
49
- import "./chunk-I6Y4O3RR.js";
50
- import "./chunk-Q5RDQNIT.js";
51
- import "./chunk-DQC5FFGV.js";
52
- import "./chunk-HS5PO5ZQ.js";
53
- export {
54
- HierCluster,
55
- componentInit,
56
- getPlotConfig,
57
- hierClusterInit
58
- };
59
- //# sourceMappingURL=hierCluster-2HFMEHAD.js.map
package/dist/hierCluster-5RQV7B5I.js DELETED
@@ -1,55 +0,0 @@
1
- import {
2
- HierCluster,
3
- componentInit,
4
- hierClusterInit
5
- } from "./chunk-232OR2PG.js";
6
- import "./chunk-5U7AYOEZ.js";
7
- import "./chunk-OSYSJHAA.js";
8
- import "./chunk-4S7TWVOY.js";
9
- import "./chunk-HYOCZPKO.js";
10
- import "./chunk-E24IUWHH.js";
11
- import "./chunk-753GDKSC.js";
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- import "./chunk-7AOA5WZY.js";
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- import "./chunk-DVWCDEN3.js";
14
- import "./chunk-TGKWEAUE.js";
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- import "./chunk-N6NL4XG2.js";
16
- import "./chunk-HL5B4NME.js";
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- import "./chunk-C2MCQZWH.js";
18
- import "./chunk-DDKS3MV3.js";
19
- import "./chunk-PFRPC2SY.js";
20
- import "./chunk-I6P4LZP3.js";
21
- import "./chunk-JZQEDIGZ.js";
22
- import "./chunk-G4A3ZDDS.js";
23
- import "./chunk-V2OJLJSK.js";
24
- import "./chunk-VHDYIOWU.js";
25
- import "./chunk-HJ6L54YS.js";
26
- import "./chunk-KV4W2ACA.js";
27
- import "./chunk-5WIA4KFA.js";
28
- import "./chunk-7XZA2XR2.js";
29
- import "./chunk-DD3DWHUY.js";
30
- import "./chunk-EEB5VE2A.js";
31
- import "./chunk-6RRZRISL.js";
32
- import "./chunk-2KM4PRQM.js";
33
- import "./chunk-RMUK3TLD.js";
34
- import "./chunk-HH5JKOE6.js";
35
- import "./chunk-RU2UHH7M.js";
36
- import "./chunk-57Z4VYLM.js";
37
- import "./chunk-WINIL2KN.js";
38
- import "./chunk-PF4DSFDR.js";
39
- import "./chunk-7X6NF7NI.js";
40
- import "./chunk-W5J3LTYS.js";
41
- import "./chunk-Z2ZITHT4.js";
42
- import "./chunk-4OLM3KSB.js";
43
- import "./chunk-6XKAOSQE.js";
44
- import "./chunk-TLT4YIG3.js";
45
- import "./chunk-5R63Q5KH.js";
46
- import "./chunk-I6Y4O3RR.js";
47
- import "./chunk-Q5RDQNIT.js";
48
- import "./chunk-DQC5FFGV.js";
49
- import "./chunk-HS5PO5ZQ.js";
50
- export {
51
- HierCluster,
52
- componentInit,
53
- hierClusterInit
54
- };
55
- //# sourceMappingURL=hierCluster-5RQV7B5I.js.map
package/dist/hierCluster.config-PNBGJE6F.js DELETED
@@ -1,36 +0,0 @@
1
- import {
2
- getPlotConfig
3
- } from "./chunk-UFQDWGZU.js";
4
- import "./chunk-E24IUWHH.js";
5
- import "./chunk-753GDKSC.js";
6
- import "./chunk-C2MCQZWH.js";
7
- import "./chunk-VHDYIOWU.js";
8
- import "./chunk-HJ6L54YS.js";
9
- import "./chunk-KV4W2ACA.js";
10
- import "./chunk-5WIA4KFA.js";
11
- import "./chunk-7XZA2XR2.js";
12
- import "./chunk-DD3DWHUY.js";
13
- import "./chunk-EEB5VE2A.js";
14
- import "./chunk-6RRZRISL.js";
15
- import "./chunk-2KM4PRQM.js";
16
- import "./chunk-RMUK3TLD.js";
17
- import "./chunk-HH5JKOE6.js";
18
- import "./chunk-RU2UHH7M.js";
19
- import "./chunk-57Z4VYLM.js";
20
- import "./chunk-WINIL2KN.js";
21
- import "./chunk-PF4DSFDR.js";
22
- import "./chunk-7X6NF7NI.js";
23
- import "./chunk-W5J3LTYS.js";
24
- import "./chunk-Z2ZITHT4.js";
25
- import "./chunk-4OLM3KSB.js";
26
- import "./chunk-6XKAOSQE.js";
27
- import "./chunk-TLT4YIG3.js";
28
- import "./chunk-5R63Q5KH.js";
29
- import "./chunk-I6Y4O3RR.js";
30
- import "./chunk-Q5RDQNIT.js";
31
- import "./chunk-DQC5FFGV.js";
32
- import "./chunk-HS5PO5ZQ.js";
33
- export {
34
- getPlotConfig
35
- };
36
- //# sourceMappingURL=hierCluster.config-PNBGJE6F.js.map