@sjcrh/proteinpaint-client 2.198.0 → 2.200.0

package/dist/table-LWAI27UO.js

@@ -1,200 +0,0 @@
-import {
-  controlsInit
-} from "./chunk-5VOPABBA.js";
-import "./chunk-HJ6L54YS.js";
-import "./chunk-LSEFWW72.js";
-import "./chunk-Z5U6HOE4.js";
-import "./chunk-HYOEWQ5P.js";
-import "./chunk-HBW42TDT.js";
-import "./chunk-FN5XPUPH.js";
-import "./chunk-5ABGFJSP.js";
-import "./chunk-IIT367QZ.js";
-import "./chunk-RZGEKL77.js";
-import "./chunk-XPY6AWXO.js";
-import "./chunk-NELOT3NJ.js";
-import "./chunk-M6EF3WVV.js";
-import "./chunk-7IYJZZQI.js";
-import {
-  getCompInit
-} from "./chunk-M3J4MINX.js";
-import "./chunk-PF4DSFDR.js";
-import "./chunk-LFCYMSVA.js";
-import "./chunk-I6WR4CG7.js";
-import "./chunk-2X6W4E3W.js";
-import "./chunk-NYRZNRG5.js";
-import "./chunk-JNITUVXP.js";
-import "./chunk-3XVVN66M.js";
-import "./chunk-LOZEKOES.js";
-import "./chunk-VQZ2Z5YU.js";
-import "./chunk-NSTL4MY2.js";
-import "./chunk-TLT4YIG3.js";
-import "./chunk-KYBIQBXE.js";
-import {
-  select_default
-} from "./chunk-I6Y4O3RR.js";
-import "./chunk-OMR2DT66.js";
-import "./chunk-DQC5FFGV.js";
-import "./chunk-HFNDKYVF.js";
-
-// plots/table.js
-var TdbTable = class _TdbTable {
-  static type = "table";
-  constructor(opts) {
-    this.type = _TdbTable.type;
-  }
-  async init() {
-    const opts = this.opts;
-    const controls = opts.controls ? null : opts.holder.append("div");
-    const holder = opts.controls ? opts.holder : opts.holder.append("div");
-    this.dom = {
-      header: opts.header,
-      controls,
-      holder,
-      div: holder.style("margin", "10px 0px").style("display", "none"),
-      inputs: ["term1", "overlay"]
-    };
-    if (this.dom.header) this.dom.header.html("Crosstab");
-    setInteractivity(this);
-    setRenderers(this);
-    await this.setControls();
-  }
-  async setControls() {
-    if (this.opts.controls) {
-      this.opts.controls.on("downloadClick.table", this.download);
-    } else {
-      this.dom.holder.attr("class", "pp-termdb-plot-viz").style("display", "inline-block").style("min-width", "300px").style("margin-left", "50px");
-      this.components = {
-        controls: await controlsInit({
-          app: this.app,
-          id: this.id,
-          holder: this.dom.controls.style("display", "inline-block")
-        })
-      };
-      this.components.controls.on("downloadClick.table", this.download);
-    }
-  }
-  getState(appState, sub) {
-    const config = appState.plots.find((p) => p.id === this.id);
-    if (!config) {
-      throw `No plot with id='${this.id}' found. Did you set this.id before this.api = getComponentApi(this)?`;
-    }
-    return {
-      activeCohort: appState.activeCohort,
-      termfilter: appState.termfilter,
-      config: {
-        term: config.term,
-        term2: config.term2,
-        settings: {
-          common: config.settings.common,
-          table: config.settings.table
-        }
-      }
-    };
-  }
-  async main() {
-    try {
-      this.config = structuredClone(this.state.config);
-      if (!this.config.term2) {
-        this.dom.div.style("display", "none");
-        throw "term2 is required for table view";
-      }
-      const c = this.state.config;
-      if (this.dom.header) this.dom.header.html(c.term.term.name + " vs " + c.term2.term.name);
-      const reqOpts = this.getDataRequestOpts();
-      this.data = await this.app.vocabApi.getNestedChartSeriesData(reqOpts);
-      this.app.vocabApi.syncTermData(this.state.config, this.data);
-      const [columns, rows] = this.processData(this.data);
-      this.render(columns, rows);
-    } catch (e) {
-      throw e;
-    }
-  }
-  // creates an opts object for the vocabApi.getNestedChartsData()
-  getDataRequestOpts() {
-    const c = this.config;
-    const opts = { term: c.term, filter: this.state.termfilter.filter };
-    if (c.term2) opts.term2 = c.term2;
-    if (c.term0) opts.term0 = c.term0;
-    if (this.state.ssid) opts.ssid = this.state.ssid;
-    return opts;
-  }
-  processData(data) {
-    const t2 = this.config.term2.term;
-    const columns = data.refs.rows.map((key) => {
-      const label = t2.values && key in t2.values ? t2.values[key].label : key;
-      return { key, label };
-    });
-    const column_keys = data.refs.rows;
-    const t1 = this.config.term.term;
-    const rows = data.refs.cols.map((v1) => {
-      const series = data.charts[0].serieses.find((d) => d.seriesId == v1);
-      const label = t1.values && v1 in t1.values ? t1.values[v1].label : v1;
-      return {
-        label,
-        lst: !series ? [] : series.data.slice().sort((a, b) => column_keys.indexOf(a.dataId) - column_keys.indexOf(b.dataId)).map((d) => {
-          return {
-            label: d.dataId,
-            value: d.total
-          };
-        })
-      };
-    });
-    return [columns, rows];
-  }
-};
-function setInteractivity(self) {
-  self.download = () => {
-    if (!self.state || !self.state.isVisible) return;
-    const data = [];
-    self.dom.div.selectAll("tr").each(function() {
-      const series = [];
-      select_default(this).selectAll("th, td").each(function() {
-        series.push(select_default(this).text());
-      });
-      data.push(series);
-    });
-    const matrix = data.map((row) => row.join("	")).join("\n");
-    const a = document.createElement("a");
-    document.body.appendChild(a);
-    a.addEventListener(
-      "click",
-      function() {
-        a.download = self.config.term.term.name + " table.txt";
-        a.href = URL.createObjectURL(new Blob([matrix], { type: "text/tab-separated-values" }));
-        document.body.removeChild(a);
-      },
-      false
-    );
-    a.click();
-  };
-}
-function setRenderers(self) {
-  self.render = function render(columns, rows) {
-    self.dom.div.style("display", "inline-block").selectAll("*").remove();
-    const table = self.dom.div.append("table").style("margin-right", "20px").style("border-spacing", "3px").style("border-collapse", "collapse").style("border", "1px solid black");
-    const tr = table.append("tr").style("white-space", "normal").style("background-color", "#ececec");
-    tr.append("td");
-    for (const value of columns) {
-      const label = value.label;
-      tr.append("th").text(label.length > 20 ? label.slice(0, 16) + "..." : label).attr("aria-label", label).style("border", "1px solid black").style("padding", "3px").style("text-align", "center").style("min-width", "80px").style("max-width", "150px").style("word-break", label.length > 12 ? "break-word" : "normal").style("vertical-align", "top");
-    }
-    let i = 0;
-    for (const t1v of rows) {
-      const tr2 = table.append("tr").style("background-color", i++ % 2 == 0 ? "#fff" : "#ececec");
-      tr2.append("th").text(t1v.label.length > 20 ? t1v.label.slice(0, 20) + "..." : t1v.label).attr("aria-label", t1v.label).style("border", "1px solid black").style("padding", "3px").style("word-break", t1v.label.length > 12 ? "break-all" : "normal");
-      const column_keys = columns.map((d) => d.key);
-      for (const t2label of column_keys) {
-        const td = tr2.append("td").style("border", "1px solid black").style("padding", "3px 5px").style("text-align", "center");
-        const v = t1v.lst.find((i2) => i2.label == t2label);
-        if (v) {
-          td.html(v.value);
-        }
-      }
-    }
-  };
-}
-var tableInit = getCompInit(TdbTable);
-export {
-  tableInit
-};
-//# sourceMappingURL=table-LWAI27UO.js.map

package/dist/termCollection-3JHR74FG.js

@@ -1,179 +0,0 @@
-import {
-  mayHydrateDictTwLst,
-  renderTable
-} from "./chunk-5VOPABBA.js";
-import "./chunk-HJ6L54YS.js";
-import {
-  HandlerBase
-} from "./chunk-LSEFWW72.js";
-import "./chunk-Z5U6HOE4.js";
-import "./chunk-HYOEWQ5P.js";
-import "./chunk-HBW42TDT.js";
-import "./chunk-FN5XPUPH.js";
-import "./chunk-5ABGFJSP.js";
-import "./chunk-IIT367QZ.js";
-import "./chunk-RZGEKL77.js";
-import "./chunk-XPY6AWXO.js";
-import "./chunk-NELOT3NJ.js";
-import "./chunk-M6EF3WVV.js";
-import "./chunk-7IYJZZQI.js";
-import "./chunk-M3J4MINX.js";
-import "./chunk-PF4DSFDR.js";
-import "./chunk-LFCYMSVA.js";
-import "./chunk-I6WR4CG7.js";
-import "./chunk-2X6W4E3W.js";
-import "./chunk-NYRZNRG5.js";
-import "./chunk-JNITUVXP.js";
-import "./chunk-3XVVN66M.js";
-import "./chunk-LOZEKOES.js";
-import "./chunk-VQZ2Z5YU.js";
-import "./chunk-NSTL4MY2.js";
-import "./chunk-TLT4YIG3.js";
-import "./chunk-KYBIQBXE.js";
-import "./chunk-I6Y4O3RR.js";
-import "./chunk-OMR2DT66.js";
-import "./chunk-DQC5FFGV.js";
-import "./chunk-HFNDKYVF.js";
-
-// termsetting/handlers/termCollection.ts
-var TermCollectionHandler = class extends HandlerBase {
-  //main menu dom elements before drag and drop divs are added
-  constructor(opts) {
-    super(opts);
-    this.dom = {};
-    this.termsetting = opts.termsetting;
-    this.tw = opts.termsetting.tw;
-    this.dom.holder = opts.holder || this.termsetting.dom.tip.d;
-  }
-  async showEditMenu(div) {
-    const self = this.termsetting;
-    div.selectAll("*").remove();
-    const termIds = self.vocabApi.termdbConfig.termCollections?.find((c) => c.name === self.term.name)?.termIds || [];
-    const terms = [];
-    const toBeHydrated = [];
-    for (const id of termIds) {
-      const term = self.term.termlst.find((t) => t.id === id);
-      if (term) terms.push(term);
-      else toBeHydrated.push({ id });
-    }
-    if (toBeHydrated.length) {
-      await mayHydrateDictTwLst(toBeHydrated, self.vocabApi);
-      terms.push(...toBeHydrated.map((tw) => tw.term));
-    }
-    const groupDiv = div.append("div");
-    const noButtonCallback = (i, node) => {
-      terms[i].checked = node.checked;
-    };
-    const callback = this.tw.term.memberType == "numeric" ? addNumericTable(self, groupDiv, terms, noButtonCallback) : addCategoricalTable(self, groupDiv, terms, noButtonCallback);
-    div.append("div").append("div").style("float", "right").style("padding", "6px 20px").append("button").attr("class", "sjpp_apply_btn sja_filter_tag_btn").text("Apply").on("click", callback);
-  }
-  getPillStatus() {
-    return this.tw.getStatus(this.termsetting.usecase);
-  }
-  // inherited from HanlderBase
-  // getPillName(d: PillData) {}
-};
-function addNumericTable(self, div, terms, noButtonCallback) {
-  const rows = [];
-  for (const term of terms) {
-    const checked = self.q.numerators?.find((tid) => tid === term.id) ? "checked" : "";
-    rows.push([{ value: term.name }, { html: `<input type='checkbox' ${checked} />` }]);
-  }
-  const selectedRows = terms.map((term, index) => self.term.termlst.find((t) => t.id === term.id) ? index : -1).filter((index) => index !== -1);
-  const columns = [{ label: "VARIABLES" }, { label: "Use for sorting" }];
-  renderTable({
-    rows,
-    columns,
-    div,
-    maxWidth: "30vw",
-    maxHeight: "40vh",
-    noButtonCallback,
-    striped: false,
-    showHeader: true,
-    //false,
-    selectedRows,
-    columnButtons: void 0,
-    //Leave until table.js is typed
-    buttons: void 0
-  });
-  return () => {
-    const q = self.q;
-    const trs = div.select("table").select("tbody").node().querySelectorAll("tr");
-    self.term.termlst = terms.filter((_, i) => trs[i].querySelectorAll("td")[1].querySelector("input")?.checked);
-    q.numerators = terms.filter((term, i) => {
-      const checked = trs[i].querySelectorAll("td")[1].querySelector("input")?.checked;
-      return checked === true;
-    }).map((t) => t.id);
-    self.api.runCallback();
-  };
-}
-function addCategoricalTable(self, div, terms, noButtonCallback) {
-  const rows = [];
-  for (const term of terms) {
-    rows.push([{ value: term.name }]);
-  }
-  const selectedRows = terms.map((term, index) => self.term.termlst.find((t) => t.id === term.id) ? index : -1).filter((index) => index !== -1);
-  const columns = [{ label: "VARIABLES" }];
-  renderTable({
-    rows,
-    columns,
-    div: div.append("div").style("margin-top", "10px"),
-    maxWidth: "30vw",
-    maxHeight: "40vh",
-    noButtonCallback,
-    striped: false,
-    showHeader: true,
-    //false,
-    selectedRows,
-    columnButtons: void 0,
-    //Leave until table.js is typed
-    buttons: void 0
-  });
-  const categoryDiv = div.append("div").style("margin-top", "15px");
-  const values = Object.assign({}, ...self.tw.term.termlst?.map((t) => t.values || {}) ?? []);
-  const categoryTable = categoryDiv.append("div");
-  const ckSource = self.tw.q.categoryKeys || self.tw.term.categoryKeys || [];
-  renderTable({
-    columns: [{ label: "CATEGORIES" }],
-    rows: ckSource.map((ck) => {
-      return [{ value: values[ck.key]?.label ?? ck.key, checked: ck.shown }];
-    }),
-    div: categoryTable,
-    maxWidth: "30vw",
-    maxHeight: "40vh",
-    noButtonCallback: () => {
-    },
-    // FIXME to supply a real callback
-    striped: false,
-    showHeader: true,
-    //false,
-    selectAll: true,
-    columnButtons: void 0,
-    //Leave until table.js is typed
-    buttons: void 0
-  });
-  return () => {
-    const trs = div.select("table").select("tbody").node().querySelectorAll("tr");
-    self.term.termlst = terms.filter((term, i) => {
-      const checked = trs[i].querySelectorAll("td")[1].querySelector("input")?.checked;
-      return checked === true;
-    });
-    const catTrs = categoryTable.select("table").select("tbody").node().querySelectorAll("tr");
-    self.q.categoryKeys = ckSource.map((ck, i) => {
-      const checked = catTrs[i].querySelectorAll("td")[1].querySelector("input")?.checked;
-      return { key: ck.key, shown: !!checked };
-    });
-    self.api.runCallback();
-  };
-}
-function fillTW(tw) {
-  if (!tw.type) tw.type = "termCollection";
-  if (!tw.q) tw.q = { mode: "continuous", type: "compositePercentage" };
-  else tw.q.mode = "continuous";
-  return tw;
-}
-export {
-  TermCollectionHandler,
-  fillTW
-};
-//# sourceMappingURL=termCollection-3JHR74FG.js.map

package/dist/termCollection-3JHR74FG.js.map

@@ -1,7 +0,0 @@
-{
-  "version": 3,
-  "sources": ["../termsetting/handlers/termCollection.ts"],
-  "sourcesContent": ["import { HandlerBase } from '../HandlerBase.ts'\nimport type { Handler } from '../index.ts'\nimport { renderTable } from '#dom'\nimport type { CollectionBase } from '#tw'\nimport type { CategoryKey, TermCollectionQCont } from '#types'\nimport type { TermSetting } from '../TermSetting.ts'\nimport { mayHydrateDictTwLst } from '#termsetting'\n\n// self is the termsetting instance\nexport class TermCollectionHandler extends HandlerBase implements Handler {\n\ttw: CollectionBase\n\ttermsetting: TermSetting\n\tdom: {\n\t\t[name: string]: any\n\t} = {} //main menu dom elements before drag and drop divs are added\n\n\tconstructor(opts) {\n\t\tsuper(opts)\n\t\tthis.termsetting = opts.termsetting\n\t\tthis.tw = opts.termsetting.tw\n\t\tthis.dom.holder = opts.holder || this.termsetting.dom.tip.d\n\t\t//this.data = { groups: [], values: [], filters: [] }\n\t}\n\n\tasync showEditMenu(div: any) {\n\t\tconst self = this.termsetting\n\t\tdiv.selectAll('*').remove()\n\t\tconst termIds = self.vocabApi.termdbConfig.termCollections?.find(c => c.name === self.term.name)?.termIds || []\n\t\tconst terms: any[] = []\n\t\tconst toBeHydrated: any[] = []\n\t\tfor (const id of termIds) {\n\t\t\tconst term = self.term.termlst.find(t => t.id === id)\n\t\t\tif (term) terms.push(term)\n\t\t\telse toBeHydrated.push({ id })\n\t\t}\n\t\tif (toBeHydrated.length) {\n\t\t\tawait mayHydrateDictTwLst(toBeHydrated, self.vocabApi)\n\t\t\tterms.push(...toBeHydrated.map(tw => tw.term))\n\t\t}\n\t\tconst groupDiv = div.append('div')\n\t\tconst noButtonCallback = (i: number, node: any) => {\n\t\t\tterms[i].checked = node.checked\n\t\t\t// TODO disable \"Apply\" btn when no terms are selected\n\t\t}\n\t\tconst callback =\n\t\t\tthis.tw.term.memberType == 'numeric'\n\t\t\t\t? addNumericTable(self, groupDiv, terms, noButtonCallback)\n\t\t\t\t: addCategoricalTable(self, groupDiv, terms, noButtonCallback)\n\n\t\tdiv\n\t\t\t.append('div')\n\t\t\t.append('div')\n\t\t\t.style('float', 'right')\n\t\t\t.style('padding', '6px 20px')\n\t\t\t.append('button')\n\t\t\t.attr('class', 'sjpp_apply_btn sja_filter_tag_btn')\n\t\t\t.text('Apply')\n\t\t\t.on('click', callback)\n\t}\n\n\tgetPillStatus() {\n\t\treturn this.tw.getStatus(this.termsetting.usecase)\n\t}\n\n\t// inherited from HanlderBase\n\t// getPillName(d: PillData) {}\n}\n\nfunction addNumericTable(self, div: any, terms: any, noButtonCallback: any) {\n\tconst rows: any = []\n\tfor (const term of terms) {\n\t\tconst checked = self.q.numerators?.find(tid => tid === term.id) ? 'checked' : ''\n\t\trows.push([{ value: term.name }, { html: `<input type='checkbox' ${checked} />` }])\n\t}\n\tconst selectedRows: number[] = terms\n\t\t.map((term, index) => (self.term.termlst.find(t => t.id === term.id) ? index : -1))\n\t\t.filter(index => index !== -1)\n\n\tconst columns: any = [{ label: 'VARIABLES' }, { label: 'Use for sorting' }]\n\n\trenderTable({\n\t\trows,\n\t\tcolumns,\n\t\tdiv,\n\t\tmaxWidth: '30vw',\n\t\tmaxHeight: '40vh',\n\t\tnoButtonCallback,\n\t\tstriped: false,\n\t\tshowHeader: true, //false,\n\t\tselectedRows,\n\t\tcolumnButtons: undefined, //Leave until table.js is typed\n\t\tbuttons: undefined\n\t})\n\n\treturn () => {\n\t\tconst q: TermCollectionQCont = self.q\n\t\tconst trs = div.select('table').select('tbody').node().querySelectorAll('tr')\n\n\t\tself.term.termlst = terms.filter((_, i) => trs[i].querySelectorAll('td')[1].querySelector('input')?.checked)\n\n\t\tq.numerators = terms\n\t\t\t.filter((term, i) => {\n\t\t\t\tconst checked = trs[i].querySelectorAll('td')[1].querySelector('input')?.checked\n\t\t\t\treturn checked === true\n\t\t\t})\n\t\t\t.map(t => t.id)\n\n\t\tself.api.runCallback()\n\t}\n}\n\nfunction addCategoricalTable(self, div: any, terms: any, noButtonCallback: any) {\n\tconst rows: any = []\n\tfor (const term of terms) {\n\t\trows.push([{ value: term.name }])\n\t}\n\tconst selectedRows: number[] = terms\n\t\t.map((term, index) => (self.term.termlst.find(t => t.id === term.id) ? index : -1))\n\t\t.filter(index => index !== -1)\n\n\tconst columns: any = [{ label: 'VARIABLES' }]\n\n\trenderTable({\n\t\trows,\n\t\tcolumns,\n\t\tdiv: div.append('div').style('margin-top', '10px'),\n\t\tmaxWidth: '30vw',\n\t\tmaxHeight: '40vh',\n\t\tnoButtonCallback,\n\t\tstriped: false,\n\t\tshowHeader: true, //false,\n\t\tselectedRows,\n\t\tcolumnButtons: undefined, //Leave until table.js is typed\n\t\tbuttons: undefined\n\t})\n\n\tconst categoryDiv = div.append('div').style('margin-top', '15px')\n\t// Merge .values from all termlst entries; safe when termlst is empty or entries lack .values\n\tconst values = Object.assign({}, ...(self.tw.term.termlst?.map((t: any) => t.values || {}) ?? []))\n\tconst categoryTable = categoryDiv.append('div')\n\tconst ckSource: CategoryKey[] = self.tw.q.categoryKeys || self.tw.term.categoryKeys || []\n\trenderTable({\n\t\tcolumns: [{ label: 'CATEGORIES' }],\n\t\trows: ckSource.map((ck: CategoryKey) => {\n\t\t\treturn [{ value: values[ck.key]?.label ?? ck.key, checked: ck.shown }]\n\t\t}),\n\t\tdiv: categoryTable,\n\t\tmaxWidth: '30vw',\n\t\tmaxHeight: '40vh',\n\t\tnoButtonCallback: () => {}, // FIXME to supply a real callback\n\t\tstriped: false,\n\t\tshowHeader: true, //false,\n\t\tselectAll: true,\n\t\tcolumnButtons: undefined, //Leave until table.js is typed\n\t\tbuttons: undefined\n\t})\n\n\treturn () => {\n\t\t//const q = self.q as TermCollectionQValues\n\t\tconst trs = div.select('table').select('tbody').node().querySelectorAll('tr')\n\n\t\t// this should be in self.q ???\n\t\tself.term.termlst = terms.filter((term, i) => {\n\t\t\tconst checked = trs[i].querySelectorAll('td')[1].querySelector('input')?.checked\n\t\t\treturn checked === true\n\t\t})\n\n\t\tconst catTrs = categoryTable.select('table').select('tbody').node().querySelectorAll('tr')\n\t\tself.q.categoryKeys = ckSource.map((ck: CategoryKey, i: number) => {\n\t\t\tconst checked = catTrs[i].querySelectorAll('td')[1].querySelector('input')?.checked\n\t\t\treturn { key: ck.key, shown: !!checked }\n\t\t})\n\n\t\tself.api.runCallback()\n\t}\n}\n\nexport function fillTW(tw) {\n\tif (!tw.type) tw.type = 'termCollection'\n\t// TODO: when more termCollection types needed, should assign different q.type here.\n\tif (!tw.q) tw.q = { mode: 'continuous', type: 'compositePercentage' }\n\telse tw.q.mode = 'continuous'\n\treturn tw\n}\n"],
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-}

package/dist/termCollection-CDF5LYUG.js

@@ -1,38 +0,0 @@
-import {
-  SearchHandler
-} from "./chunk-6BB43SIB.js";
-import "./chunk-5VOPABBA.js";
-import "./chunk-HJ6L54YS.js";
-import "./chunk-LSEFWW72.js";
-import "./chunk-Z5U6HOE4.js";
-import "./chunk-HYOEWQ5P.js";
-import "./chunk-HBW42TDT.js";
-import "./chunk-FN5XPUPH.js";
-import "./chunk-5ABGFJSP.js";
-import "./chunk-IIT367QZ.js";
-import "./chunk-RZGEKL77.js";
-import "./chunk-XPY6AWXO.js";
-import "./chunk-NELOT3NJ.js";
-import "./chunk-M6EF3WVV.js";
-import "./chunk-7IYJZZQI.js";
-import "./chunk-M3J4MINX.js";
-import "./chunk-PF4DSFDR.js";
-import "./chunk-LFCYMSVA.js";
-import "./chunk-I6WR4CG7.js";
-import "./chunk-2X6W4E3W.js";
-import "./chunk-NYRZNRG5.js";
-import "./chunk-JNITUVXP.js";
-import "./chunk-3XVVN66M.js";
-import "./chunk-LOZEKOES.js";
-import "./chunk-VQZ2Z5YU.js";
-import "./chunk-NSTL4MY2.js";
-import "./chunk-TLT4YIG3.js";
-import "./chunk-KYBIQBXE.js";
-import "./chunk-I6Y4O3RR.js";
-import "./chunk-OMR2DT66.js";
-import "./chunk-DQC5FFGV.js";
-import "./chunk-HFNDKYVF.js";
-export {
-  SearchHandler
-};
-//# sourceMappingURL=termCollection-CDF5LYUG.js.map

package/dist/termCollection.unit.spec-HOJKYWHF.js

@@ -1,208 +0,0 @@
-import {
-  SearchHandler
-} from "./chunk-6BB43SIB.js";
-import {
-  require_tape
-} from "./chunk-TUMA63WX.js";
-import "./chunk-5VOPABBA.js";
-import "./chunk-HJ6L54YS.js";
-import "./chunk-LSEFWW72.js";
-import "./chunk-Z5U6HOE4.js";
-import "./chunk-HYOEWQ5P.js";
-import "./chunk-HBW42TDT.js";
-import "./chunk-FN5XPUPH.js";
-import "./chunk-5ABGFJSP.js";
-import "./chunk-IIT367QZ.js";
-import "./chunk-RZGEKL77.js";
-import "./chunk-XPY6AWXO.js";
-import "./chunk-NELOT3NJ.js";
-import "./chunk-M6EF3WVV.js";
-import "./chunk-7IYJZZQI.js";
-import "./chunk-M3J4MINX.js";
-import "./chunk-PF4DSFDR.js";
-import "./chunk-LFCYMSVA.js";
-import "./chunk-I6WR4CG7.js";
-import "./chunk-2X6W4E3W.js";
-import "./chunk-NYRZNRG5.js";
-import "./chunk-JNITUVXP.js";
-import "./chunk-3XVVN66M.js";
-import "./chunk-LOZEKOES.js";
-import "./chunk-VQZ2Z5YU.js";
-import "./chunk-NSTL4MY2.js";
-import "./chunk-TLT4YIG3.js";
-import "./chunk-KYBIQBXE.js";
-import {
-  select_default
-} from "./chunk-I6Y4O3RR.js";
-import "./chunk-OMR2DT66.js";
-import "./chunk-DQC5FFGV.js";
-import {
-  __toESM
-} from "./chunk-HFNDKYVF.js";
-
-// termdb/handlers/test/termCollection.unit.spec.ts
-var import_tape = __toESM(require_tape(), 1);
-function getHolder() {
-  return select_default("body").append("div");
-}
-function getTermCollectionDetails(overrides = {}) {
-  return {
-    name: "Test Collection",
-    type: "gene",
-    memberType: "gene",
-    termlst: [
-      { id: "gene1", name: "TP53", values: { tissue: "Lung" } },
-      { id: "gene2", name: "KRAS", values: { tissue: "Colon" } },
-      { id: "gene3", name: "BRCA1", values: { tissue: "Breast" } }
-    ],
-    categoryKeys: [
-      { key: "tissue", shown: true },
-      { key: "expression", shown: false }
-    ],
-    propsByTermId: {
-      gene1: { color: "#FF0000" },
-      gene2: { color: "#00FF00" }
-    },
-    ...overrides
-  };
-}
-(0, import_tape.default)("\n", function(test) {
-  test.comment("-***- termdb/handlers/termCollection -***-");
-  test.end();
-});
-(0, import_tape.default)("init() should render term list table with all terms from details.termlst", async (test) => {
-  const handler = new SearchHandler();
-  const holder = getHolder();
-  const details = getTermCollectionDetails();
-  await handler.init({
-    holder,
-    callback: () => {
-    },
-    app: {},
-    details
-  });
-  const table = holder.select("table");
-  test.ok(table.node(), "Should render a table");
-  const rows = table.selectAll("tbody tr");
-  test.equal(rows.size(), 3, "Should render three rows for three terms");
-  const rowTexts = rows.nodes().map((row) => row.textContent.trim());
-  test.ok(rowTexts[0].includes("TP53"), "First row should contain TP53");
-  test.ok(rowTexts[1].includes("KRAS"), "Second row should contain KRAS");
-  test.ok(rowTexts[2].includes("BRCA1"), "Third row should contain BRCA1");
-  if (test["_ok"]) holder.remove();
-  test.end();
-});
-(0, import_tape.default)("init() should render category table when details.categoryKeys is present", async (test) => {
-  const handler = new SearchHandler();
-  const holder = getHolder();
-  const details = getTermCollectionDetails();
-  await handler.init({
-    holder,
-    callback: () => {
-    },
-    app: {},
-    details
-  });
-  const tables = holder.selectAll("table");
-  test.equal(tables.size(), 2, "Should render two tables when categoryKeys is present");
-  const categoryTable = tables.nodes()[1];
-  const categoryRows = select_default(categoryTable).selectAll("tbody tr");
-  test.equal(categoryRows.size(), 2, "Should render two rows for two categories");
-  const categoryTexts = categoryRows.nodes().map((row) => row.textContent.trim());
-  test.ok(categoryTexts[0].includes("tissue"), "Should display tissue category key");
-  test.ok(categoryTexts[1].includes("expression"), "Should display expression category key");
-  if (test["_ok"]) holder.remove();
-  test.end();
-});
-(0, import_tape.default)("init() should call callback with selected terms, categoryKeys, and properties", async (test) => {
-  const handler = new SearchHandler();
-  const holder = getHolder();
-  const details = getTermCollectionDetails();
-  let callbackResult;
-  await handler.init({
-    holder,
-    callback: (result) => {
-      callbackResult = result;
-    },
-    app: {},
-    details
-  });
-  const termsTable = holder.selectAll("table").nodes()[0];
-  const checkboxes = termsTable.querySelectorAll('tbody input[type="checkbox"]');
-  checkboxes[0].checked = true;
-  checkboxes[1].checked = true;
-  checkboxes[2].checked = false;
-  const categoryTable = holder.selectAll("table").nodes()[1];
-  const categoryCheckboxes = categoryTable.querySelectorAll('tbody input[type="checkbox"]');
-  categoryCheckboxes[0].checked = true;
-  categoryCheckboxes[1].checked = false;
-  const selectBtn = holder.select("button.sjpp_apply_btn").node();
-  selectBtn.click();
-  test.equal(callbackResult?.type, "termCollection", "Should set type to termCollection");
-  test.equal(callbackResult?.name, "Test Collection", "Should pass collection name");
-  test.equal(callbackResult?.memberType, "gene", "Should pass memberType");
-  test.deepEqual(callbackResult?.termIds, ["gene1", "gene2"], "Should pass selected term IDs");
-  test.equal(callbackResult?.termlst.length, 2, "Should pass selected term list with correct length");
-  test.equal(callbackResult?.termlst[0].name, "TP53", "First selected term should be TP53");
-  test.equal(callbackResult?.termlst[1].name, "KRAS", "Second selected term should be KRAS");
-  test.deepEqual(
-    callbackResult?.categoryKeys,
-    [
-      { key: "tissue", shown: true },
-      { key: "expression", shown: false }
-    ],
-    "Should pass updated categoryKeys with shown status"
-  );
-  test.deepEqual(
-    callbackResult?.propsByTermId,
-    { gene1: { color: "#FF0000" }, gene2: { color: "#00FF00" } },
-    "Should pass propsByTermId for selected terms only"
-  );
-  if (test["_ok"]) holder.remove();
-  test.end();
-});
-(0, import_tape.default)("init() should not render category table when details.categoryKeys is missing", async (test) => {
-  const handler = new SearchHandler();
-  const holder = getHolder();
-  const details = getTermCollectionDetails({ categoryKeys: void 0 });
-  await handler.init({
-    holder,
-    callback: () => {
-    },
-    app: {},
-    details
-  });
-  const tables = holder.selectAll("table");
-  test.equal(tables.size(), 1, "Should render only one table when categoryKeys is missing");
-  if (test["_ok"]) holder.remove();
-  test.end();
-});
-(0, import_tape.default)("init() should show alert when no terms are selected", async (test) => {
-  const handler = new SearchHandler();
-  const holder = getHolder();
-  const details = getTermCollectionDetails();
-  let alertCalled = false;
-  const originalAlert = window.alert;
-  window.alert = () => {
-    alertCalled = true;
-  };
-  await handler.init({
-    holder,
-    callback: () => test.fail("Callback should not be called when no terms selected"),
-    app: {},
-    details
-  });
-  const termsTable = holder.selectAll("table").nodes()[0];
-  const checkboxes = termsTable.querySelectorAll('tbody input[type="checkbox"]');
-  for (const cb of checkboxes) {
-    ;
-    cb.checked = false;
-  }
-  const selectBtn = holder.select("button.sjpp_apply_btn").node();
-  selectBtn.click();
-  test.ok(alertCalled, "Should show alert when no terms are selected");
-  window.alert = originalAlert;
-  if (test["_ok"]) holder.remove();
-  test.end();
-});
-//# sourceMappingURL=termCollection.unit.spec-HOJKYWHF.js.map