@sjcrh/proteinpaint-client 2.193.0 → 2.195.0

package/dist/chunk-UKABZJQ7.js

@@ -0,0 +1,480 @@
+import {
+  renderTable
+} from "./chunk-LYULXXGR.js";
+import {
+  clusterMethodLst,
+  distanceMethodLst
+} from "./chunk-MNPTPENH.js";
+import {
+  termType2label
+} from "./chunk-UAALI7MC.js";
+import {
+  select_default
+} from "./chunk-I6Y4O3RR.js";
+import {
+  __export
+} from "./chunk-HFNDKYVF.js";
+
+// plots/matrix/hierCluster.interactivity.js
+var hierCluster_interactivity_exports = {};
+__export(hierCluster_interactivity_exports, {
+  addSelectedRowsOptions: () => addSelectedRowsOptions,
+  addSelectedSamplesOptions: () => addSelectedSamplesOptions,
+  getAllChildrenClusterIds: () => getAllChildrenClusterIds,
+  getClusterFromLeftDendrogram: () => getClusterFromLeftDendrogram,
+  getClusterFromTopDendrogram: () => getClusterFromTopDendrogram,
+  setClusteringBtn: () => setClusteringBtn,
+  showTable4selectedRows: () => showTable4selectedRows,
+  showTable4selectedSamples: () => showTable4selectedSamples,
+  triggerZoomBranch: () => triggerZoomBranch
+});
+function getAllChildrenClusterIds(clickedClusterId, left) {
+  const mergedClusters = left ? this.hierClusterData.clustering.row.mergedClusters : this.hierClusterData.clustering.col.mergedClusters;
+  const children = mergedClusters.get(clickedClusterId).childrenClusters || [];
+  let allChildren = [...children];
+  for (const child of children) {
+    allChildren = allChildren.concat(this.getAllChildrenClusterIds(child, left));
+  }
+  return allChildren;
+}
+function addSelectedSamplesOptions(clickedSampleNames, event) {
+  const l = this.settings.matrix.controlLabels;
+  const ss = this.opts.allow2selectSamples;
+  const optionArr = [
+    {
+      label: "Zoom in",
+      callback: () => {
+        this.triggerZoomBranch(this, clickedSampleNames);
+      }
+    },
+    {
+      label: `List ${clickedSampleNames.length} ${l.samples}`,
+      callback: () => this.showTable4selectedSamples(clickedSampleNames)
+    }
+  ];
+  if (ss) {
+    optionArr.push({
+      label: ss.buttonText || `Select ${l.samples}`,
+      callback: async () => {
+        const samples = clickedSampleNames.map((c) => this.data.samples[c]);
+        ss.callback({
+          samples: await this.app.vocabApi.convertSampleId(samples, ss.attributes),
+          source: ss.defaultSelectionLabel || `Selected ${l.samples} from gene expression`
+        });
+      }
+    });
+  } else {
+    if (this.state.nav && this.state.nav.header_mode !== "hidden") {
+      const samples = clickedSampleNames.map((c) => this.sampleOrder.find((s) => s.row.sample == c).row);
+      for (const s of samples) {
+        if (!s.sampleId) s.sampleId = s.sample;
+      }
+      optionArr.push({
+        label: "Add to a group",
+        callback: async () => {
+          const group = {
+            name: "Group",
+            items: samples
+          };
+          this.addGroup(group);
+        }
+      });
+    }
+  }
+  this.mouseout();
+  this.dom.tip.hide();
+  this.dom.dendroClickMenu.d.selectAll("*").remove();
+  this.dom.dendroClickMenu.d.selectAll("div").data(optionArr).enter().append("div").attr("class", "sja_menuoption").style("border-radius", "0px").html((d) => d.label).attr("data-testid", (d) => `hierCluster_dendro_menu_${d.label.split(" ")[0]}`).on("click", (event2) => {
+    this.dom.dendroClickMenu.d.selectAll("*").remove();
+    event2.target.__data__.callback();
+  });
+  this.dom.dendroClickMenu.show(event.clientX, event.clientY);
+}
+function addSelectedRowsOptions(clickedRowNames, event) {
+  const rowType = this.config.settings.matrix.controlLabels.terms;
+  const optionArr = [
+    {
+      label: `List ${clickedRowNames.length} ${rowType}`,
+      callback: () => this.showTable4selectedRows(clickedRowNames, rowType)
+    }
+  ];
+  if (this.config.dataType == "geneExpression" && this.app.opts.genome.termdbs) {
+    const minGeneCutoff = this.app.opts.genome.termdbs.msigdb.geneORAparam.minCutoff;
+    const maxGeneCutoff = this.app.opts.genome.termdbs.msigdb.geneORAparam.maxCutoff;
+    optionArr.push({
+      label: `Gene set overrepresentation analysis`,
+      disabled: clickedRowNames.length < minGeneCutoff || clickedRowNames.length > maxGeneCutoff,
+      callback: () => {
+        if (clickedRowNames.length < minGeneCutoff || clickedRowNames.length > maxGeneCutoff) return;
+        this.dom.dendroClickMenu.d.selectAll("*").remove();
+        const lst = [];
+        for (const x of clickedRowNames) {
+          const j = this.terms?.find?.((t) => t.tw.$id == x);
+          if (j) {
+            const n = j.tw?.term?.gene;
+            if (n) lst.push(n);
+          }
+        }
+        const config = {
+          chartType: "geneORA",
+          geneORAparams: {
+            sample_genes: lst.join(","),
+            genome: this.app.vocabApi.opts.state.vocab.genome
+          }
+        };
+        this.app.dispatch({
+          type: "plot_create",
+          config
+        });
+      }
+    });
+  }
+  this.mouseout();
+  this.dom.tip.hide();
+  this.dom.dendroClickMenu.d.selectAll("*").remove();
+  this.dom.dendroClickMenu.d.selectAll("div").data(optionArr).enter().append("div").attr("class", (d) => d.disabled ? "sja_menuoption_not_interactive" : "sja_menuoption").style("opacity", (d) => d.disabled ? 0.5 : 1).style("border-radius", "0px").html(
+    (d) => d.disabled ? `${d.label} <span style="font-size: 0.6em; display: block; margin-left: 2px; margin-top: 2px;">Only available when 15 - 500 genes selected</span>` : d.label
+  ).attr("data-testid", (d) => `hierCluster_dendro_menu_${d.label.split(" ")[0]}`).on("click", (event2) => {
+    if (event2.target.__data__?.callback) event2.target.__data__.callback();
+  });
+  this.dom.dendroClickMenu.show(event.clientX, event.clientY);
+}
+function triggerZoomBranch(self, clickedSampleNames) {
+  if (self.zoomArea) {
+    self.zoomArea.remove();
+    delete self.zoomArea;
+  }
+  const c = {
+    startCell: self.serieses[0].cells.find((d2) => d2.sample == clickedSampleNames[0]),
+    endCell: self.serieses[0].cells.find((d2) => d2.sample == clickedSampleNames[clickedSampleNames.length - 1])
+  };
+  const s = self.settings.matrix;
+  const d = self.dimensions;
+  const start = c.startCell.totalIndex < c.endCell.totalIndex ? c.startCell : c.endCell;
+  const zoomIndex = Math.floor(start.totalIndex + Math.abs(c.endCell.totalIndex - c.startCell.totalIndex) / 2);
+  const centerCell = self.sampleOrder[zoomIndex];
+  const colw = self.computedSettings.colw || self.settings.matrix.colw;
+  const maxZoomLevel = s.colwMax / colw;
+  const minZoomLevel = s.colwMin / colw;
+  const tentativeZoomLevel = Math.max(
+    1,
+    s.zoomLevel * d.mainw / Math.max(c.endCell.x - c.startCell.x, 2 * d.colw) * 0.7
+  );
+  const zoomLevel = Math.max(minZoomLevel, Math.min(tentativeZoomLevel, maxZoomLevel));
+  self.app.dispatch({
+    type: "plot_edit",
+    id: self.id,
+    config: {
+      settings: {
+        matrix: {
+          zoomLevel,
+          zoomCenterPct: 0.5,
+          //zoomLevel < 1 && d.mainw >= d.zoomedMainW ? 0.5 : zoomCenter / d.mainw,
+          zoomIndex,
+          zoomGrpIndex: centerCell.grpIndex
+        }
+      }
+    }
+  });
+  self.resetInteractions();
+}
+function showTable4selectedSamples(clickedSampleNames) {
+  const templates = this.state.termdbConfig.urlTemplates;
+  const rows = templates?.sample ? clickedSampleNames.map((c) => [
+    { value: this.hierClusterData.bySampleId[c].label, url: `${templates.sample.base}${c}` }
+  ]) : clickedSampleNames.map((c) => [{ value: this.hierClusterData.bySampleId[c].label }]);
+  const columns = [{ label: this.settings.matrix.controlLabels.Sample }];
+  renderTable({
+    rows,
+    columns,
+    div: this.dom.dendroClickMenu.clear().d.append("div").style("margin", "10px"),
+    showLines: true,
+    maxHeight: "35vh",
+    resize: true
+  });
+}
+function showTable4selectedRows(clickedRowNames, rowType) {
+  const templates = this.state.termdbConfig.urlTemplates;
+  const rows = [];
+  if (templates?.gene && this.config.dataType == "geneExpression" && this.hierClusterData.byTermId) {
+    for (const i of clickedRowNames) {
+      const genesymbol = this.terms.find((t) => t.tw?.$id == i)?.tw?.term?.gene;
+      if (!genesymbol) continue;
+      const gencode = this.hierClusterData.byTermId[i]?.gencodeId;
+      if (gencode) {
+        rows.push([{ value: genesymbol, url: `${templates.gene.base}${gencode}` }]);
+      } else {
+        rows.push([{ value: genesymbol }]);
+      }
+    }
+  } else {
+    for (const i of clickedRowNames) {
+      const tw = this.terms.find((t) => t.tw?.$id == i)?.tw;
+      if (!tw) continue;
+      const n = tw.term?.gene || tw.term?.name;
+      if (!n) continue;
+      rows.push([{ value: n }]);
+    }
+  }
+  const div = this.dom.dendroClickMenu.clear().d.append("div").style("margin", "10px");
+  const buttonDiv = div.append("div").style("padding", "5px");
+  const copyButton = buttonDiv.append("button").html(`Copy ${rowType}`).attr("class", ".sja_menu_div button").style("margin-top", "2px").style("padding", "5px").on("click", () => {
+    const geneNames = rows.map((row) => row[0].value).join("\n");
+    navigator.clipboard.writeText(geneNames).then(() => {
+    }, console.warn);
+    copyButton.html(`Copy ${rowType}&nbsp;&check;`);
+  });
+  renderTable({
+    rows,
+    columns: [{ label: rowType }],
+    div: div.append("div"),
+    showLines: true,
+    maxHeight: "35vh",
+    resize: true
+  });
+}
+function getClusterFromTopDendrogram(event) {
+  if (event.target.tagName == "image") this.imgBox = event.target.getBoundingClientRect();
+  else return;
+  const y = event.clientY - this.imgBox.y - event.target.clientTop;
+  const xMin = this.dimensions.xMin;
+  const x = event.clientX - this.imgBox.x - event.target.clientLeft + xMin;
+  for (const [clusterId, cluster] of this.hierClusterData.clustering.col.mergedClusters) {
+    const { x1, y1, x2, y2, clusterY } = cluster.clusterPosition;
+    if (x1 <= x && x <= x2 && clusterY - 5 < y && y < clusterY + 5 || clusterY <= y && y <= y1 && x1 - 5 < x && x < x1 + 5 || clusterY <= y && y <= y2 && x2 - 5 < x && x < x2 + 5) {
+      return clusterId;
+    }
+  }
+}
+function getClusterFromLeftDendrogram(event) {
+  if (event.target.tagName == "image") this.imgBox = event.target.getBoundingClientRect();
+  else return;
+  const y = event.clientY - this.imgBox.y - event.target.clientTop;
+  const xMin = this.dimensions.xMin;
+  const x = event.clientX - this.imgBox.x - event.target.clientLeft + xMin;
+  for (const [clusterId, cluster] of this.hierClusterData.clustering.row.mergedClusters) {
+    const { x1, y1, x2, y2, clusterX } = cluster.clusterPosition;
+    if (y1 <= y && y <= y2 && clusterX - 5 < x && x < clusterX + 5 || clusterX <= x && x <= x1 && y1 - 5 < y && y < y1 + 5 || clusterX <= x && x <= x2 && y2 - 5 < y && y < y2 + 5) {
+      return clusterId;
+    }
+  }
+}
+function setClusteringBtn(holder, callback) {
+  const cl = this.config.settings.matrix.controlLabels;
+  const dataType = this.config.dataType;
+  const clusterRowLabel = cl.Terms;
+  const cluteringButtonLabel = `${termType2label(dataType)} Clustering`;
+  holder.append("button").datum({
+    label: cluteringButtonLabel,
+    getCount: () => this.hcTermGroup?.lst.length || 0,
+    showCount: "hide",
+    rows: [
+      {
+        label: `Cluster ${cl.Samples}`,
+        title: `Option to enable ${cl.samples} clustering, instead of enabling ${cl.samples} sorting.`,
+        type: "checkbox",
+        chartType: "hierCluster",
+        settingsKey: "clusterSamples",
+        boxLabel: `Cluster ${cl.Samples} (Disable ${cl.Samples} Sorting)`,
+        callback: (checked) => {
+          if (!checked) {
+            this.config.settings.hierCluster.yDendrogramHeight = 0;
+            this.config.settings.hierCluster.clusterSamples = false;
+          } else {
+            this.config.divideBy = null;
+            this.config.settings.hierCluster.yDendrogramHeight = 200;
+            this.config.settings.hierCluster.clusterSamples = true;
+          }
+          this.app.dispatch({
+            type: "plot_edit",
+            id: this.id,
+            config: this.config
+          });
+        }
+      },
+      {
+        label: `Cluster ${clusterRowLabel}`,
+        title: `Option to enable ${clusterRowLabel} clustering, instead of enabling ${clusterRowLabel} sorting.`,
+        type: "checkbox",
+        chartType: "hierCluster",
+        settingsKey: "clusterRows",
+        boxLabel: `Cluster ${clusterRowLabel} (Disable ${clusterRowLabel} Sorting)`,
+        callback: (checked) => {
+          if (!checked) {
+            this.config.settings.hierCluster.clusterRows = false;
+            this.config.settings.hierCluster.sortClusterRows = "asListed";
+          } else {
+            this.config.settings.hierCluster.clusterRows = true;
+            this.config.settings.hierCluster.sortClusterRows = void 0;
+          }
+          this.app.dispatch({
+            type: "plot_edit",
+            id: this.id,
+            config: this.config
+          });
+        }
+      },
+      {
+        label: `Sort ${clusterRowLabel}`,
+        title: `Set how to order the ${clusterRowLabel} as rows`,
+        type: "radio",
+        chartType: "hierCluster",
+        settingsKey: "sortClusterRows",
+        options: [
+          { label: `By input ${clusterRowLabel} order`, value: "asListed" },
+          { label: `By ${clusterRowLabel} name`, value: "byName" }
+        ],
+        styles: { padding: 0, "padding-right": "10px", margin: 0, display: "inline-block" },
+        getDisplayStyle(plot) {
+          return plot.settings.hierCluster.clusterRows ? "none" : "table-row";
+        }
+      },
+      {
+        label: "Z-score Transformation",
+        title: `Option to do Z-score transformation`,
+        type: "checkbox",
+        chartType: "hierCluster",
+        settingsKey: "zScoreTransformation",
+        boxLabel: `Perform Z-score Transformation`,
+        callback: (checked) => {
+          if (!checked) {
+            this.config.settings.hierCluster.zScoreTransformation = false;
+            this.config.settings.hierCluster.colorScale = "whiteRed";
+          } else {
+            this.config.settings.hierCluster.zScoreTransformation = true;
+            this.config.settings.hierCluster.colorScale = "blueWhiteRed";
+          }
+          this.app.dispatch({
+            type: "plot_edit",
+            id: this.id,
+            config: this.config
+          });
+        }
+      },
+      {
+        label: `Clustering Method`,
+        title: `Sets which clustering method to use`,
+        type: "radio",
+        chartType: "hierCluster",
+        settingsKey: "clusterMethod",
+        options: clusterMethodLst
+      },
+      {
+        label: `Distance Method`,
+        title: `Sets which distance method to use for clustering`,
+        type: "radio",
+        chartType: "hierCluster",
+        settingsKey: "distanceMethod",
+        options: distanceMethodLst
+      },
+      {
+        label: `Column Dendrogram Height`,
+        title: `The maximum height to render the column dendrogram`,
+        type: "number",
+        chartType: "hierCluster",
+        settingsKey: "yDendrogramHeight",
+        getDisplayStyle(plot) {
+          return plot.settings.hierCluster.clusterSamples ? "table-row" : "none";
+        }
+      },
+      {
+        label: `Row Dendrogram Width`,
+        title: `The maximum width to render the row dendrogram`,
+        type: "number",
+        chartType: "hierCluster",
+        settingsKey: "xDendrogramHeight",
+        getDisplayStyle(plot) {
+          return plot.settings.hierCluster.clusterRows ? "table-row" : "none";
+        }
+      },
+      {
+        label: `Z-score Cap`,
+        title: `Cap the Z-score scale to not exceed this absolute value`,
+        type: "number",
+        chartType: "hierCluster",
+        settingsKey: "zScoreCap"
+      },
+      {
+        label: `Color Scheme`,
+        title: `Sets which color scheme to use`,
+        type: "radio",
+        chartType: "hierCluster",
+        settingsKey: "colorScale",
+        options: [
+          {
+            label: "Blue-White-Red",
+            value: "blueWhiteRed",
+            title: `color scheme Blue-White-Red`
+          },
+          {
+            label: "Green-Black-Red",
+            value: "greenBlackRed",
+            title: `color scheme Green-Black-Red`
+          },
+          {
+            label: "Blue-Yellow-Red",
+            value: "blueYellowRed",
+            title: `color scheme Blue-Yellow-Red`
+          },
+          {
+            label: "Green-White-Red",
+            value: "greenWhiteRed",
+            title: `color scheme Green-White-Red`
+          },
+          {
+            label: "Blue-Black-Yellow",
+            value: "blueBlackYellow",
+            title: `color scheme Blue-Black-Yellow`
+          }
+        ]
+      }
+    ],
+    customInputs: updateClusteringControls
+  }).html((d) => d.label).style("margin", "2px 0").on("click", callback);
+}
+function updateClusteringControls(self, app, parent, table) {
+  if (parent.chartType == "hierCluster" && !parent.config.settings.hierCluster.zScoreTransformation) {
+    const zScoreCapControl = select_default(
+      table.selectAll("td").filter(function() {
+        return select_default(this).text() == "Z-score Cap";
+      }).node().closest("tr")
+    );
+    zScoreCapControl.style("display", "none");
+    const colorSchemeControl = select_default(
+      table.selectAll("td").filter(function() {
+        return select_default(this).text() == "Color Scheme";
+      }).node().closest("tr")
+    );
+    colorSchemeControl.style("display", "none");
+  }
+  if (parent.chartType == "hierCluster" && parent.config.dataType !== "geneExpression") {
+    const geneInputTr = table.insert("tr", () => table.select("tr").node());
+    geneInputTr.append("td").attr("class", "sja-termdb-config-row-label").html("Hierarchical Clustering Term Set");
+    const td1 = geneInputTr.append("td").style("display", "block").style("padding", "5px 0px");
+    const editGrpDiv = td1.append("div").append("label");
+    const clusteringBtn = self.btns.node();
+    editGrpDiv.append("button").html("Edit Set").on("click", () => {
+      app.tip.clear();
+      const backDiv = app.tip.d.append("div").style("padding", "5px");
+      backDiv.attr("tabindex", 0).style("padding", "5px").style("text-decoration", "underline").style("cursor", "pointer").style("margin-bottom", "12px").html(`&#171; Back`).on("click", () => clusteringBtn.click()).on("keyup", (event) => {
+        if (event.key == "Enter") event.target.click();
+      });
+      const setEdiUiHolder = app.tip.d.append("div");
+      parent.showDictTermSelection(setEdiUiHolder);
+    });
+  }
+}
+
+export {
+  getAllChildrenClusterIds,
+  addSelectedSamplesOptions,
+  addSelectedRowsOptions,
+  triggerZoomBranch,
+  showTable4selectedSamples,
+  showTable4selectedRows,
+  getClusterFromTopDendrogram,
+  getClusterFromLeftDendrogram,
+  setClusteringBtn,
+  hierCluster_interactivity_exports
+};
+//# sourceMappingURL=chunk-UKABZJQ7.js.map

package/dist/chunk-UKABZJQ7.js.map

@@ -0,0 +1,7 @@
+{
+  "version": 3,
+  "sources": ["../plots/matrix/hierCluster.interactivity.js"],
+  "sourcesContent": ["import { renderTable } from '#dom'\nimport { clusterMethodLst, distanceMethodLst } from '#shared/clustering.js'\nimport { select } from 'd3-selection'\nimport { termType2label } from '#shared/terms.js'\n\n// Given a clusterId, return all its children clusterIds\nexport function getAllChildrenClusterIds(clickedClusterId, left) {\n\tconst mergedClusters = left\n\t\t? this.hierClusterData.clustering.row.mergedClusters\n\t\t: this.hierClusterData.clustering.col.mergedClusters\n\tconst children = mergedClusters.get(clickedClusterId).childrenClusters || []\n\tlet allChildren = [...children]\n\tfor (const child of children) {\n\t\tallChildren = allChildren.concat(this.getAllChildrenClusterIds(child, left))\n\t}\n\treturn allChildren\n}\n\nexport function addSelectedSamplesOptions(clickedSampleNames, event) {\n\tconst l = this.settings.matrix.controlLabels\n\tconst ss = this.opts.allow2selectSamples\n\tconst optionArr = [\n\t\t{\n\t\t\tlabel: 'Zoom in',\n\t\t\tcallback: () => {\n\t\t\t\tthis.triggerZoomBranch(this, clickedSampleNames)\n\t\t\t}\n\t\t},\n\t\t{\n\t\t\tlabel: `List ${clickedSampleNames.length} ${l.samples}`,\n\t\t\tcallback: () => this.showTable4selectedSamples(clickedSampleNames)\n\t\t}\n\t]\n\n\t// when allow2selectSamples presents\n\tif (ss) {\n\t\toptionArr.push({\n\t\t\tlabel: ss.buttonText || `Select ${l.samples}`,\n\t\t\tcallback: async () => {\n\t\t\t\t// convert ids of selected samples based on\n\t\t\t\t// attributes defined in allow2selectSamples\n\t\t\t\tconst samples = clickedSampleNames.map(c => this.data.samples[c])\n\t\t\t\tss.callback({\n\t\t\t\t\tsamples: await this.app.vocabApi.convertSampleId(samples, ss.attributes),\n\t\t\t\t\tsource: ss.defaultSelectionLabel || `Selected ${l.samples} from gene expression`\n\t\t\t\t})\n\t\t\t}\n\t\t})\n\t} else {\n\t\tif (this.state.nav && this.state.nav.header_mode !== 'hidden') {\n\t\t\tconst samples = clickedSampleNames.map(c => this.sampleOrder.find(s => s.row.sample == c).row)\n\t\t\tfor (const s of samples) {\n\t\t\t\tif (!s.sampleId) s.sampleId = s.sample\n\t\t\t}\n\t\t\toptionArr.push({\n\t\t\t\tlabel: 'Add to a group',\n\t\t\t\tcallback: async () => {\n\t\t\t\t\tconst group = {\n\t\t\t\t\t\tname: 'Group',\n\t\t\t\t\t\titems: samples\n\t\t\t\t\t}\n\t\t\t\t\tthis.addGroup(group)\n\t\t\t\t}\n\t\t\t})\n\t\t}\n\t}\n\n\tthis.mouseout()\n\tthis.dom.tip.hide()\n\tthis.dom.dendroClickMenu.d.selectAll('*').remove()\n\tthis.dom.dendroClickMenu.d\n\t\t.selectAll('div')\n\t\t.data(optionArr)\n\t\t.enter()\n\t\t.append('div')\n\t\t.attr('class', 'sja_menuoption')\n\t\t.style('border-radius', '0px')\n\t\t.html(d => d.label)\n\t\t.attr('data-testid', d => `hierCluster_dendro_menu_${d.label.split(' ')[0]}`)\n\t\t.on('click', event => {\n\t\t\tthis.dom.dendroClickMenu.d.selectAll('*').remove()\n\t\t\tevent.target.__data__.callback()\n\t\t})\n\tthis.dom.dendroClickMenu.show(event.clientX, event.clientY)\n}\n\nexport function addSelectedRowsOptions(clickedRowNames, event) {\n\tconst rowType = this.config.settings.matrix.controlLabels.terms\n\n\tconst optionArr = [\n\t\t{\n\t\t\tlabel: `List ${clickedRowNames.length} ${rowType}`,\n\t\t\tcallback: () => this.showTable4selectedRows(clickedRowNames, rowType)\n\t\t}\n\t]\n\n\tif (this.config.dataType == 'geneExpression' && this.app.opts.genome.termdbs) {\n\t\t// when doing gene exp clustering and has genome-level geneset db, enable option for gene ORA analysis\n\t\t// gene ORA cutoffs queried from genome file\n\t\tconst minGeneCutoff = this.app.opts.genome.termdbs.msigdb.geneORAparam.minCutoff\n\t\tconst maxGeneCutoff = this.app.opts.genome.termdbs.msigdb.geneORAparam.maxCutoff\n\t\toptionArr.push({\n\t\t\tlabel: `Gene set overrepresentation analysis`,\n\t\t\tdisabled: clickedRowNames.length < minGeneCutoff || clickedRowNames.length > maxGeneCutoff,\n\t\t\tcallback: () => {\n\t\t\t\tif (clickedRowNames.length < minGeneCutoff || clickedRowNames.length > maxGeneCutoff) return\n\t\t\t\tthis.dom.dendroClickMenu.d.selectAll('*').remove()\n\t\t\t\tconst lst = []\n\t\t\t\tfor (const x of clickedRowNames) {\n\t\t\t\t\tconst j = this.terms?.find?.(t => t.tw.$id == x)\n\t\t\t\t\tif (j) {\n\t\t\t\t\t\tconst n = j.tw?.term?.gene\n\t\t\t\t\t\tif (n) lst.push(n)\n\t\t\t\t\t}\n\t\t\t\t}\n\t\t\t\tconst config = {\n\t\t\t\t\tchartType: 'geneORA',\n\t\t\t\t\tgeneORAparams: {\n\t\t\t\t\t\tsample_genes: lst.join(','),\n\t\t\t\t\t\tgenome: this.app.vocabApi.opts.state.vocab.genome\n\t\t\t\t\t}\n\t\t\t\t}\n\t\t\t\tthis.app.dispatch({\n\t\t\t\t\ttype: 'plot_create',\n\t\t\t\t\tconfig\n\t\t\t\t})\n\t\t\t}\n\t\t})\n\t}\n\n\tthis.mouseout()\n\tthis.dom.tip.hide()\n\tthis.dom.dendroClickMenu.d.selectAll('*').remove()\n\tthis.dom.dendroClickMenu.d\n\t\t.selectAll('div')\n\t\t.data(optionArr)\n\t\t.enter()\n\t\t.append('div')\n\t\t.attr('class', d => (d.disabled ? 'sja_menuoption_not_interactive' : 'sja_menuoption'))\n\t\t.style('opacity', d => (d.disabled ? 0.5 : 1))\n\t\t.style('border-radius', '0px')\n\t\t.html(d =>\n\t\t\td.disabled\n\t\t\t\t? `${d.label} <span style=\"font-size: 0.6em; display: block; margin-left: 2px; margin-top: 2px;\">Only available when 15 - 500 genes selected</span>`\n\t\t\t\t: d.label\n\t\t)\n\t\t.attr('data-testid', d => `hierCluster_dendro_menu_${d.label.split(' ')[0]}`)\n\t\t.on('click', event => {\n\t\t\tif (event.target.__data__?.callback) event.target.__data__.callback()\n\t\t})\n\tthis.dom.dendroClickMenu.show(event.clientX, event.clientY)\n}\n\n// zoom in matrix to the selected dendrogram branch\nexport function triggerZoomBranch(self, clickedSampleNames) {\n\tif (self.zoomArea) {\n\t\tself.zoomArea.remove()\n\t\tdelete self.zoomArea\n\t}\n\tconst c = {\n\t\tstartCell: self.serieses[0].cells.find(d => d.sample == clickedSampleNames[0]),\n\t\tendCell: self.serieses[0].cells.find(d => d.sample == clickedSampleNames[clickedSampleNames.length - 1])\n\t}\n\n\tconst s = self.settings.matrix\n\tconst d = self.dimensions\n\tconst start = c.startCell.totalIndex < c.endCell.totalIndex ? c.startCell : c.endCell\n\tconst zoomIndex = Math.floor(start.totalIndex + Math.abs(c.endCell.totalIndex - c.startCell.totalIndex) / 2)\n\tconst centerCell = self.sampleOrder[zoomIndex] // || self.getImgCell(event)\n\tconst colw = self.computedSettings.colw || self.settings.matrix.colw\n\tconst maxZoomLevel = s.colwMax / colw\n\tconst minZoomLevel = s.colwMin / colw\n\tconst tentativeZoomLevel = Math.max(\n\t\t1,\n\t\t((s.zoomLevel * d.mainw) / Math.max(c.endCell.x - c.startCell.x, 2 * d.colw)) * 0.7\n\t)\n\tconst zoomLevel = Math.max(minZoomLevel, Math.min(tentativeZoomLevel, maxZoomLevel))\n\t//const zoomCenter = centerCell.totalIndex * d.dx + (centerCell.grpIndex - 1) * s.colgspace + d.seriesXoffset\n\n\tself.app.dispatch({\n\t\ttype: 'plot_edit',\n\t\tid: self.id,\n\t\tconfig: {\n\t\t\tsettings: {\n\t\t\t\tmatrix: {\n\t\t\t\t\tzoomLevel,\n\t\t\t\t\tzoomCenterPct: 0.5,\n\t\t\t\t\t//zoomLevel < 1 && d.mainw >= d.zoomedMainW ? 0.5 : zoomCenter / d.mainw,\n\t\t\t\t\tzoomIndex,\n\t\t\t\t\tzoomGrpIndex: centerCell.grpIndex\n\t\t\t\t}\n\t\t\t}\n\t\t}\n\t})\n\tself.resetInteractions()\n}\n\n// show the list of clicked samples as a table\nexport function showTable4selectedSamples(clickedSampleNames) {\n\tconst templates = this.state.termdbConfig.urlTemplates\n\tconst rows = templates?.sample\n\t\t? clickedSampleNames.map(c => [\n\t\t\t\t{ value: this.hierClusterData.bySampleId[c].label, url: `${templates.sample.base}${c}` }\n\t\t  ])\n\t\t: clickedSampleNames.map(c => [{ value: this.hierClusterData.bySampleId[c].label }])\n\n\tconst columns = [{ label: this.settings.matrix.controlLabels.Sample }]\n\n\trenderTable({\n\t\trows,\n\t\tcolumns,\n\t\tdiv: this.dom.dendroClickMenu.clear().d.append('div').style('margin', '10px'),\n\t\tshowLines: true,\n\t\tmaxHeight: '35vh',\n\t\tresize: true\n\t})\n}\n\n// show the list of clicked samples as a table\nexport function showTable4selectedRows(clickedRowNames, rowType) {\n\t// clickedRowNames is array of tw.$id\n\tconst templates = this.state.termdbConfig.urlTemplates\n\n\tconst rows = []\n\tif (templates?.gene && this.config.dataType == 'geneExpression' && this.hierClusterData.byTermId) {\n\t\t// show gene names with templated url\n\t\tfor (const i of clickedRowNames) {\n\t\t\tconst genesymbol = this.terms.find(t => t.tw?.$id == i)?.tw?.term?.gene\n\t\t\tif (!genesymbol) continue\n\t\t\t// FIXME hardcoded to assume gencode\n\t\t\tconst gencode = this.hierClusterData.byTermId[i]?.gencodeId\n\t\t\tif (gencode) {\n\t\t\t\trows.push([{ value: genesymbol, url: `${templates.gene.base}${gencode}` }])\n\t\t\t} else {\n\t\t\t\trows.push([{ value: genesymbol }])\n\t\t\t}\n\t\t}\n\t} else {\n\t\tfor (const i of clickedRowNames) {\n\t\t\tconst tw = this.terms.find(t => t.tw?.$id == i)?.tw\n\t\t\tif (!tw) continue\n\t\t\t// item name can be either gene or not gene (will use term.name)\n\t\t\tconst n = tw.term?.gene || tw.term?.name\n\t\t\tif (!n) continue\n\t\t\trows.push([{ value: n }])\n\t\t}\n\t}\n\n\tconst div = this.dom.dendroClickMenu.clear().d.append('div').style('margin', '10px')\n\n\t// Create a button to copy names in the table\n\tconst buttonDiv = div.append('div').style('padding', '5px')\n\tconst copyButton = buttonDiv\n\t\t.append('button')\n\t\t.html(`Copy ${rowType}`)\n\t\t.attr('class', '.sja_menu_div button')\n\t\t.style('margin-top', '2px')\n\t\t.style('padding', '5px')\n\t\t.on('click', () => {\n\t\t\tconst geneNames = rows.map(row => row[0].value).join('\\n')\n\t\t\tnavigator.clipboard.writeText(geneNames).then(() => {}, console.warn)\n\t\t\tcopyButton.html(`Copy ${rowType}&nbsp;&check;`)\n\t\t})\n\trenderTable({\n\t\trows,\n\t\tcolumns: [{ label: rowType }],\n\t\tdiv: div.append('div'),\n\t\tshowLines: true,\n\t\tmaxHeight: '35vh',\n\t\tresize: true\n\t})\n}\n\n// upon clicking, find the corresponding clicked clusterId from this.hierClusterData.clustering.col.mergedClusters\nexport function getClusterFromTopDendrogram(event) {\n\t// Need imgBox to find the position of event relative to dendrogram\n\tif (event.target.tagName == 'image') this.imgBox = event.target.getBoundingClientRect()\n\telse return\n\n\tconst y = event.clientY - this.imgBox.y - event.target.clientTop\n\tconst xMin = this.dimensions.xMin\n\tconst x = event.clientX - this.imgBox.x - event.target.clientLeft + xMin\n\n\tfor (const [clusterId, cluster] of this.hierClusterData.clustering.col.mergedClusters) {\n\t\tconst { x1, y1, x2, y2, clusterY } = cluster.clusterPosition\n\t\tif (\n\t\t\t(x1 <= x && x <= x2 && clusterY - 5 < y && y < clusterY + 5) ||\n\t\t\t(clusterY <= y && y <= y1 && x1 - 5 < x && x < x1 + 5) ||\n\t\t\t(clusterY <= y && y <= y2 && x2 - 5 < x && x < x2 + 5)\n\t\t) {\n\t\t\treturn clusterId\n\t\t}\n\t}\n}\n\n// upon clicking, find the corresponding clicked clusterId from this.hierClusterData.clustering.row.mergedClusters\nexport function getClusterFromLeftDendrogram(event) {\n\t// Need imgBox to find the position of event relative to dendrogram\n\tif (event.target.tagName == 'image') this.imgBox = event.target.getBoundingClientRect()\n\telse return\n\n\tconst y = event.clientY - this.imgBox.y - event.target.clientTop\n\tconst xMin = this.dimensions.xMin\n\tconst x = event.clientX - this.imgBox.x - event.target.clientLeft + xMin\n\n\tfor (const [clusterId, cluster] of this.hierClusterData.clustering.row.mergedClusters) {\n\t\tconst { x1, y1, x2, y2, clusterX } = cluster.clusterPosition\n\t\tif (\n\t\t\t(y1 <= y && y <= y2 && clusterX - 5 < x && x < clusterX + 5) ||\n\t\t\t(clusterX <= x && x <= x1 && y1 - 5 < y && y < y1 + 5) ||\n\t\t\t(clusterX <= x && x <= x2 && y2 - 5 < y && y < y2 + 5)\n\t\t) {\n\t\t\treturn clusterId\n\t\t}\n\t}\n}\n\nexport function setClusteringBtn(holder, callback) {\n\tconst cl = this.config.settings.matrix.controlLabels\n\tconst dataType = this.config.dataType\n\tconst clusterRowLabel = cl.Terms\n\tconst cluteringButtonLabel = `${termType2label(dataType)} Clustering`\n\tholder\n\t\t.append('button')\n\t\t//.property('disabled', d => d.disabled)\n\t\t.datum({\n\t\t\tlabel: cluteringButtonLabel,\n\t\t\tgetCount: () => this.hcTermGroup?.lst.length || 0,\n\t\t\tshowCount: 'hide',\n\t\t\trows: [\n\t\t\t\t{\n\t\t\t\t\tlabel: `Cluster ${cl.Samples}`,\n\t\t\t\t\ttitle: `Option to enable ${cl.samples} clustering, instead of enabling ${cl.samples} sorting.`,\n\t\t\t\t\ttype: 'checkbox',\n\t\t\t\t\tchartType: 'hierCluster',\n\t\t\t\t\tsettingsKey: 'clusterSamples',\n\t\t\t\t\tboxLabel: `Cluster ${cl.Samples} (Disable ${cl.Samples} Sorting)`,\n\t\t\t\t\tcallback: checked => {\n\t\t\t\t\t\tif (!checked) {\n\t\t\t\t\t\t\tthis.config.settings.hierCluster.yDendrogramHeight = 0\n\t\t\t\t\t\t\tthis.config.settings.hierCluster.clusterSamples = false\n\t\t\t\t\t\t} else {\n\t\t\t\t\t\t\tthis.config.divideBy = null\n\t\t\t\t\t\t\tthis.config.settings.hierCluster.yDendrogramHeight = 200\n\t\t\t\t\t\t\tthis.config.settings.hierCluster.clusterSamples = true\n\t\t\t\t\t\t}\n\t\t\t\t\t\tthis.app.dispatch({\n\t\t\t\t\t\t\ttype: 'plot_edit',\n\t\t\t\t\t\t\tid: this.id,\n\t\t\t\t\t\t\tconfig: this.config\n\t\t\t\t\t\t})\n\t\t\t\t\t}\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tlabel: `Cluster ${clusterRowLabel}`,\n\t\t\t\t\ttitle: `Option to enable ${clusterRowLabel} clustering, instead of enabling ${clusterRowLabel} sorting.`,\n\t\t\t\t\ttype: 'checkbox',\n\t\t\t\t\tchartType: 'hierCluster',\n\t\t\t\t\tsettingsKey: 'clusterRows',\n\t\t\t\t\tboxLabel: `Cluster ${clusterRowLabel} (Disable ${clusterRowLabel} Sorting)`,\n\t\t\t\t\tcallback: checked => {\n\t\t\t\t\t\tif (!checked) {\n\t\t\t\t\t\t\tthis.config.settings.hierCluster.clusterRows = false\n\t\t\t\t\t\t\tthis.config.settings.hierCluster.sortClusterRows = 'asListed'\n\t\t\t\t\t\t} else {\n\t\t\t\t\t\t\tthis.config.settings.hierCluster.clusterRows = true\n\t\t\t\t\t\t\tthis.config.settings.hierCluster.sortClusterRows = undefined\n\t\t\t\t\t\t}\n\t\t\t\t\t\tthis.app.dispatch({\n\t\t\t\t\t\t\ttype: 'plot_edit',\n\t\t\t\t\t\t\tid: this.id,\n\t\t\t\t\t\t\tconfig: this.config\n\t\t\t\t\t\t})\n\t\t\t\t\t}\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tlabel: `Sort ${clusterRowLabel}`,\n\t\t\t\t\ttitle: `Set how to order the ${clusterRowLabel} as rows`,\n\t\t\t\t\ttype: 'radio',\n\t\t\t\t\tchartType: 'hierCluster',\n\t\t\t\t\tsettingsKey: 'sortClusterRows',\n\t\t\t\t\toptions: [\n\t\t\t\t\t\t{ label: `By input ${clusterRowLabel} order`, value: 'asListed' },\n\t\t\t\t\t\t{ label: `By ${clusterRowLabel} name`, value: 'byName' }\n\t\t\t\t\t],\n\t\t\t\t\tstyles: { padding: 0, 'padding-right': '10px', margin: 0, display: 'inline-block' },\n\t\t\t\t\tgetDisplayStyle(plot) {\n\t\t\t\t\t\treturn plot.settings.hierCluster.clusterRows ? 'none' : 'table-row'\n\t\t\t\t\t}\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tlabel: 'Z-score Transformation',\n\t\t\t\t\ttitle: `Option to do Z-score transformation`,\n\t\t\t\t\ttype: 'checkbox',\n\t\t\t\t\tchartType: 'hierCluster',\n\t\t\t\t\tsettingsKey: 'zScoreTransformation',\n\t\t\t\t\tboxLabel: `Perform Z-score Transformation`,\n\t\t\t\t\tcallback: checked => {\n\t\t\t\t\t\tif (!checked) {\n\t\t\t\t\t\t\tthis.config.settings.hierCluster.zScoreTransformation = false\n\t\t\t\t\t\t\tthis.config.settings.hierCluster.colorScale = 'whiteRed'\n\t\t\t\t\t\t} else {\n\t\t\t\t\t\t\tthis.config.settings.hierCluster.zScoreTransformation = true\n\t\t\t\t\t\t\tthis.config.settings.hierCluster.colorScale = 'blueWhiteRed'\n\t\t\t\t\t\t}\n\t\t\t\t\t\tthis.app.dispatch({\n\t\t\t\t\t\t\ttype: 'plot_edit',\n\t\t\t\t\t\t\tid: this.id,\n\t\t\t\t\t\t\tconfig: this.config\n\t\t\t\t\t\t})\n\t\t\t\t\t}\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tlabel: `Clustering Method`,\n\t\t\t\t\ttitle: `Sets which clustering method to use`,\n\t\t\t\t\ttype: 'radio',\n\t\t\t\t\tchartType: 'hierCluster',\n\t\t\t\t\tsettingsKey: 'clusterMethod',\n\t\t\t\t\toptions: clusterMethodLst\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tlabel: `Distance Method`,\n\t\t\t\t\ttitle: `Sets which distance method to use for clustering`,\n\t\t\t\t\ttype: 'radio',\n\t\t\t\t\tchartType: 'hierCluster',\n\t\t\t\t\tsettingsKey: 'distanceMethod',\n\t\t\t\t\toptions: distanceMethodLst\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tlabel: `Column Dendrogram Height`,\n\t\t\t\t\ttitle: `The maximum height to render the column dendrogram`,\n\t\t\t\t\ttype: 'number',\n\t\t\t\t\tchartType: 'hierCluster',\n\t\t\t\t\tsettingsKey: 'yDendrogramHeight',\n\t\t\t\t\tgetDisplayStyle(plot) {\n\t\t\t\t\t\treturn plot.settings.hierCluster.clusterSamples ? 'table-row' : 'none'\n\t\t\t\t\t}\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tlabel: `Row Dendrogram Width`,\n\t\t\t\t\ttitle: `The maximum width to render the row dendrogram`,\n\t\t\t\t\ttype: 'number',\n\t\t\t\t\tchartType: 'hierCluster',\n\t\t\t\t\tsettingsKey: 'xDendrogramHeight',\n\t\t\t\t\tgetDisplayStyle(plot) {\n\t\t\t\t\t\treturn plot.settings.hierCluster.clusterRows ? 'table-row' : 'none'\n\t\t\t\t\t}\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tlabel: `Z-score Cap`,\n\t\t\t\t\ttitle: `Cap the Z-score scale to not exceed this absolute value`,\n\t\t\t\t\ttype: 'number',\n\t\t\t\t\tchartType: 'hierCluster',\n\t\t\t\t\tsettingsKey: 'zScoreCap'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tlabel: `Color Scheme`,\n\t\t\t\t\ttitle: `Sets which color scheme to use`,\n\t\t\t\t\ttype: 'radio',\n\t\t\t\t\tchartType: 'hierCluster',\n\t\t\t\t\tsettingsKey: 'colorScale',\n\t\t\t\t\toptions: [\n\t\t\t\t\t\t{\n\t\t\t\t\t\t\tlabel: 'Blue-White-Red',\n\t\t\t\t\t\t\tvalue: 'blueWhiteRed',\n\t\t\t\t\t\t\ttitle: `color scheme Blue-White-Red`\n\t\t\t\t\t\t},\n\t\t\t\t\t\t{\n\t\t\t\t\t\t\tlabel: 'Green-Black-Red',\n\t\t\t\t\t\t\tvalue: 'greenBlackRed',\n\t\t\t\t\t\t\ttitle: `color scheme Green-Black-Red`\n\t\t\t\t\t\t},\n\t\t\t\t\t\t{\n\t\t\t\t\t\t\tlabel: 'Blue-Yellow-Red',\n\t\t\t\t\t\t\tvalue: 'blueYellowRed',\n\t\t\t\t\t\t\ttitle: `color scheme Blue-Yellow-Red`\n\t\t\t\t\t\t},\n\t\t\t\t\t\t{\n\t\t\t\t\t\t\tlabel: 'Green-White-Red',\n\t\t\t\t\t\t\tvalue: 'greenWhiteRed',\n\t\t\t\t\t\t\ttitle: `color scheme Green-White-Red`\n\t\t\t\t\t\t},\n\t\t\t\t\t\t{\n\t\t\t\t\t\t\tlabel: 'Blue-Black-Yellow',\n\t\t\t\t\t\t\tvalue: 'blueBlackYellow',\n\t\t\t\t\t\t\ttitle: `color scheme Blue-Black-Yellow`\n\t\t\t\t\t\t}\n\t\t\t\t\t]\n\t\t\t\t}\n\t\t\t],\n\t\t\tcustomInputs: updateClusteringControls\n\t\t})\n\t\t.html(d => d.label)\n\t\t.style('margin', '2px 0')\n\t\t.on('click', callback)\n}\n\nfunction updateClusteringControls(self, app, parent, table) {\n\tif (parent.chartType == 'hierCluster' && !parent.config.settings.hierCluster.zScoreTransformation) {\n\t\tconst zScoreCapControl = select(\n\t\t\ttable\n\t\t\t\t.selectAll('td')\n\t\t\t\t.filter(function () {\n\t\t\t\t\treturn select(this).text() == 'Z-score Cap'\n\t\t\t\t})\n\t\t\t\t.node()\n\t\t\t\t.closest('tr')\n\t\t)\n\t\tzScoreCapControl.style('display', 'none')\n\t\tconst colorSchemeControl = select(\n\t\t\ttable\n\t\t\t\t.selectAll('td')\n\t\t\t\t.filter(function () {\n\t\t\t\t\treturn select(this).text() == 'Color Scheme'\n\t\t\t\t})\n\t\t\t\t.node()\n\t\t\t\t.closest('tr')\n\t\t)\n\t\tcolorSchemeControl.style('display', 'none')\n\t}\n\n\t// Add set edit option for all term types except geneExpression\n\tif (parent.chartType == 'hierCluster' && parent.config.dataType !== 'geneExpression') {\n\t\tconst geneInputTr = table.insert('tr', () => table.select('tr').node())\n\t\tgeneInputTr.append('td').attr('class', 'sja-termdb-config-row-label').html('Hierarchical Clustering Term Set')\n\n\t\tconst td1 = geneInputTr.append('td').style('display', 'block').style('padding', '5px 0px')\n\t\tconst editGrpDiv = td1.append('div').append('label')\n\n\t\tconst clusteringBtn = self.btns.node()\n\t\teditGrpDiv\n\t\t\t.append('button')\n\t\t\t.html('Edit Set')\n\t\t\t.on('click', () => {\n\t\t\t\tapp.tip.clear()\n\t\t\t\tconst backDiv = app.tip.d.append('div').style('padding', '5px')\n\t\t\t\tbackDiv\n\t\t\t\t\t.attr('tabindex', 0)\n\t\t\t\t\t.style('padding', '5px')\n\t\t\t\t\t.style('text-decoration', 'underline')\n\t\t\t\t\t.style('cursor', 'pointer')\n\t\t\t\t\t.style('margin-bottom', '12px')\n\t\t\t\t\t.html(`&#171; Back`)\n\t\t\t\t\t.on('click', () => clusteringBtn.click())\n\t\t\t\t\t.on('keyup', event => {\n\t\t\t\t\t\tif (event.key == 'Enter') event.target.click()\n\t\t\t\t\t})\n\t\t\t\tconst setEdiUiHolder = app.tip.d.append('div')\n\t\t\t\tparent.showDictTermSelection(setEdiUiHolder)\n\t\t\t})\n\t}\n}\n"],
+  "mappings": ";;;;;;;;;;;;;;;;;;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAMO,SAAS,yBAAyB,kBAAkB,MAAM;AAChE,QAAM,iBAAiB,OACpB,KAAK,gBAAgB,WAAW,IAAI,iBACpC,KAAK,gBAAgB,WAAW,IAAI;AACvC,QAAM,WAAW,eAAe,IAAI,gBAAgB,EAAE,oBAAoB,CAAC;AAC3E,MAAI,cAAc,CAAC,GAAG,QAAQ;AAC9B,aAAW,SAAS,UAAU;AAC7B,kBAAc,YAAY,OAAO,KAAK,yBAAyB,OAAO,IAAI,CAAC;AAAA,EAC5E;AACA,SAAO;AACR;AAEO,SAAS,0BAA0B,oBAAoB,OAAO;AACpE,QAAM,IAAI,KAAK,SAAS,OAAO;AAC/B,QAAM,KAAK,KAAK,KAAK;AACrB,QAAM,YAAY;AAAA,IACjB;AAAA,MACC,OAAO;AAAA,MACP,UAAU,MAAM;AACf,aAAK,kBAAkB,MAAM,kBAAkB;AAAA,MAChD;AAAA,IACD;AAAA,IACA;AAAA,MACC,OAAO,QAAQ,mBAAmB,MAAM,IAAI,EAAE,OAAO;AAAA,MACrD,UAAU,MAAM,KAAK,0BAA0B,kBAAkB;AAAA,IAClE;AAAA,EACD;AAGA,MAAI,IAAI;AACP,cAAU,KAAK;AAAA,MACd,OAAO,GAAG,cAAc,UAAU,EAAE,OAAO;AAAA,MAC3C,UAAU,YAAY;AAGrB,cAAM,UAAU,mBAAmB,IAAI,OAAK,KAAK,KAAK,QAAQ,CAAC,CAAC;AAChE,WAAG,SAAS;AAAA,UACX,SAAS,MAAM,KAAK,IAAI,SAAS,gBAAgB,SAAS,GAAG,UAAU;AAAA,UACvE,QAAQ,GAAG,yBAAyB,YAAY,EAAE,OAAO;AAAA,QAC1D,CAAC;AAAA,MACF;AAAA,IACD,CAAC;AAAA,EACF,OAAO;AACN,QAAI,KAAK,MAAM,OAAO,KAAK,MAAM,IAAI,gBAAgB,UAAU;AAC9D,YAAM,UAAU,mBAAmB,IAAI,OAAK,KAAK,YAAY,KAAK,OAAK,EAAE,IAAI,UAAU,CAAC,EAAE,GAAG;AAC7F,iBAAW,KAAK,SAAS;AACxB,YAAI,CAAC,EAAE,SAAU,GAAE,WAAW,EAAE;AAAA,MACjC;AACA,gBAAU,KAAK;AAAA,QACd,OAAO;AAAA,QACP,UAAU,YAAY;AACrB,gBAAM,QAAQ;AAAA,YACb,MAAM;AAAA,YACN,OAAO;AAAA,UACR;AACA,eAAK,SAAS,KAAK;AAAA,QACpB;AAAA,MACD,CAAC;AAAA,IACF;AAAA,EACD;AAEA,OAAK,SAAS;AACd,OAAK,IAAI,IAAI,KAAK;AAClB,OAAK,IAAI,gBAAgB,EAAE,UAAU,GAAG,EAAE,OAAO;AACjD,OAAK,IAAI,gBAAgB,EACvB,UAAU,KAAK,EACf,KAAK,SAAS,EACd,MAAM,EACN,OAAO,KAAK,EACZ,KAAK,SAAS,gBAAgB,EAC9B,MAAM,iBAAiB,KAAK,EAC5B,KAAK,OAAK,EAAE,KAAK,EACjB,KAAK,eAAe,OAAK,2BAA2B,EAAE,MAAM,MAAM,GAAG,EAAE,CAAC,CAAC,EAAE,EAC3E,GAAG,SAAS,CAAAA,WAAS;AACrB,SAAK,IAAI,gBAAgB,EAAE,UAAU,GAAG,EAAE,OAAO;AACjD,IAAAA,OAAM,OAAO,SAAS,SAAS;AAAA,EAChC,CAAC;AACF,OAAK,IAAI,gBAAgB,KAAK,MAAM,SAAS,MAAM,OAAO;AAC3D;AAEO,SAAS,uBAAuB,iBAAiB,OAAO;AAC9D,QAAM,UAAU,KAAK,OAAO,SAAS,OAAO,cAAc;AAE1D,QAAM,YAAY;AAAA,IACjB;AAAA,MACC,OAAO,QAAQ,gBAAgB,MAAM,IAAI,OAAO;AAAA,MAChD,UAAU,MAAM,KAAK,uBAAuB,iBAAiB,OAAO;AAAA,IACrE;AAAA,EACD;AAEA,MAAI,KAAK,OAAO,YAAY,oBAAoB,KAAK,IAAI,KAAK,OAAO,SAAS;AAG7E,UAAM,gBAAgB,KAAK,IAAI,KAAK,OAAO,QAAQ,OAAO,aAAa;AACvE,UAAM,gBAAgB,KAAK,IAAI,KAAK,OAAO,QAAQ,OAAO,aAAa;AACvE,cAAU,KAAK;AAAA,MACd,OAAO;AAAA,MACP,UAAU,gBAAgB,SAAS,iBAAiB,gBAAgB,SAAS;AAAA,MAC7E,UAAU,MAAM;AACf,YAAI,gBAAgB,SAAS,iBAAiB,gBAAgB,SAAS,cAAe;AACtF,aAAK,IAAI,gBAAgB,EAAE,UAAU,GAAG,EAAE,OAAO;AACjD,cAAM,MAAM,CAAC;AACb,mBAAW,KAAK,iBAAiB;AAChC,gBAAM,IAAI,KAAK,OAAO,OAAO,OAAK,EAAE,GAAG,OAAO,CAAC;AAC/C,cAAI,GAAG;AACN,kBAAM,IAAI,EAAE,IAAI,MAAM;AACtB,gBAAI,EAAG,KAAI,KAAK,CAAC;AAAA,UAClB;AAAA,QACD;AACA,cAAM,SAAS;AAAA,UACd,WAAW;AAAA,UACX,eAAe;AAAA,YACd,cAAc,IAAI,KAAK,GAAG;AAAA,YAC1B,QAAQ,KAAK,IAAI,SAAS,KAAK,MAAM,MAAM;AAAA,UAC5C;AAAA,QACD;AACA,aAAK,IAAI,SAAS;AAAA,UACjB,MAAM;AAAA,UACN;AAAA,QACD,CAAC;AAAA,MACF;AAAA,IACD,CAAC;AAAA,EACF;AAEA,OAAK,SAAS;AACd,OAAK,IAAI,IAAI,KAAK;AAClB,OAAK,IAAI,gBAAgB,EAAE,UAAU,GAAG,EAAE,OAAO;AACjD,OAAK,IAAI,gBAAgB,EACvB,UAAU,KAAK,EACf,KAAK,SAAS,EACd,MAAM,EACN,OAAO,KAAK,EACZ,KAAK,SAAS,OAAM,EAAE,WAAW,mCAAmC,gBAAiB,EACrF,MAAM,WAAW,OAAM,EAAE,WAAW,MAAM,CAAE,EAC5C,MAAM,iBAAiB,KAAK,EAC5B;AAAA,IAAK,OACL,EAAE,WACC,GAAG,EAAE,KAAK,2IACV,EAAE;AAAA,EACN,EACC,KAAK,eAAe,OAAK,2BAA2B,EAAE,MAAM,MAAM,GAAG,EAAE,CAAC,CAAC,EAAE,EAC3E,GAAG,SAAS,CAAAA,WAAS;AACrB,QAAIA,OAAM,OAAO,UAAU,SAAU,CAAAA,OAAM,OAAO,SAAS,SAAS;AAAA,EACrE,CAAC;AACF,OAAK,IAAI,gBAAgB,KAAK,MAAM,SAAS,MAAM,OAAO;AAC3D;AAGO,SAAS,kBAAkB,MAAM,oBAAoB;AAC3D,MAAI,KAAK,UAAU;AAClB,SAAK,SAAS,OAAO;AACrB,WAAO,KAAK;AAAA,EACb;AACA,QAAM,IAAI;AAAA,IACT,WAAW,KAAK,SAAS,CAAC,EAAE,MAAM,KAAK,CAAAC,OAAKA,GAAE,UAAU,mBAAmB,CAAC,CAAC;AAAA,IAC7E,SAAS,KAAK,SAAS,CAAC,EAAE,MAAM,KAAK,CAAAA,OAAKA,GAAE,UAAU,mBAAmB,mBAAmB,SAAS,CAAC,CAAC;AAAA,EACxG;AAEA,QAAM,IAAI,KAAK,SAAS;AACxB,QAAM,IAAI,KAAK;AACf,QAAM,QAAQ,EAAE,UAAU,aAAa,EAAE,QAAQ,aAAa,EAAE,YAAY,EAAE;AAC9E,QAAM,YAAY,KAAK,MAAM,MAAM,aAAa,KAAK,IAAI,EAAE,QAAQ,aAAa,EAAE,UAAU,UAAU,IAAI,CAAC;AAC3G,QAAM,aAAa,KAAK,YAAY,SAAS;AAC7C,QAAM,OAAO,KAAK,iBAAiB,QAAQ,KAAK,SAAS,OAAO;AAChE,QAAM,eAAe,EAAE,UAAU;AACjC,QAAM,eAAe,EAAE,UAAU;AACjC,QAAM,qBAAqB,KAAK;AAAA,IAC/B;AAAA,IACE,EAAE,YAAY,EAAE,QAAS,KAAK,IAAI,EAAE,QAAQ,IAAI,EAAE,UAAU,GAAG,IAAI,EAAE,IAAI,IAAK;AAAA,EACjF;AACA,QAAM,YAAY,KAAK,IAAI,cAAc,KAAK,IAAI,oBAAoB,YAAY,CAAC;AAGnF,OAAK,IAAI,SAAS;AAAA,IACjB,MAAM;AAAA,IACN,IAAI,KAAK;AAAA,IACT,QAAQ;AAAA,MACP,UAAU;AAAA,QACT,QAAQ;AAAA,UACP;AAAA,UACA,eAAe;AAAA;AAAA,UAEf;AAAA,UACA,cAAc,WAAW;AAAA,QAC1B;AAAA,MACD;AAAA,IACD;AAAA,EACD,CAAC;AACD,OAAK,kBAAkB;AACxB;AAGO,SAAS,0BAA0B,oBAAoB;AAC7D,QAAM,YAAY,KAAK,MAAM,aAAa;AAC1C,QAAM,OAAO,WAAW,SACrB,mBAAmB,IAAI,OAAK;AAAA,IAC5B,EAAE,OAAO,KAAK,gBAAgB,WAAW,CAAC,EAAE,OAAO,KAAK,GAAG,UAAU,OAAO,IAAI,GAAG,CAAC,GAAG;AAAA,EACvF,CAAC,IACD,mBAAmB,IAAI,OAAK,CAAC,EAAE,OAAO,KAAK,gBAAgB,WAAW,CAAC,EAAE,MAAM,CAAC,CAAC;AAEpF,QAAM,UAAU,CAAC,EAAE,OAAO,KAAK,SAAS,OAAO,cAAc,OAAO,CAAC;AAErE,cAAY;AAAA,IACX;AAAA,IACA;AAAA,IACA,KAAK,KAAK,IAAI,gBAAgB,MAAM,EAAE,EAAE,OAAO,KAAK,EAAE,MAAM,UAAU,MAAM;AAAA,IAC5E,WAAW;AAAA,IACX,WAAW;AAAA,IACX,QAAQ;AAAA,EACT,CAAC;AACF;AAGO,SAAS,uBAAuB,iBAAiB,SAAS;AAEhE,QAAM,YAAY,KAAK,MAAM,aAAa;AAE1C,QAAM,OAAO,CAAC;AACd,MAAI,WAAW,QAAQ,KAAK,OAAO,YAAY,oBAAoB,KAAK,gBAAgB,UAAU;AAEjG,eAAW,KAAK,iBAAiB;AAChC,YAAM,aAAa,KAAK,MAAM,KAAK,OAAK,EAAE,IAAI,OAAO,CAAC,GAAG,IAAI,MAAM;AACnE,UAAI,CAAC,WAAY;AAEjB,YAAM,UAAU,KAAK,gBAAgB,SAAS,CAAC,GAAG;AAClD,UAAI,SAAS;AACZ,aAAK,KAAK,CAAC,EAAE,OAAO,YAAY,KAAK,GAAG,UAAU,KAAK,IAAI,GAAG,OAAO,GAAG,CAAC,CAAC;AAAA,MAC3E,OAAO;AACN,aAAK,KAAK,CAAC,EAAE,OAAO,WAAW,CAAC,CAAC;AAAA,MAClC;AAAA,IACD;AAAA,EACD,OAAO;AACN,eAAW,KAAK,iBAAiB;AAChC,YAAM,KAAK,KAAK,MAAM,KAAK,OAAK,EAAE,IAAI,OAAO,CAAC,GAAG;AACjD,UAAI,CAAC,GAAI;AAET,YAAM,IAAI,GAAG,MAAM,QAAQ,GAAG,MAAM;AACpC,UAAI,CAAC,EAAG;AACR,WAAK,KAAK,CAAC,EAAE,OAAO,EAAE,CAAC,CAAC;AAAA,IACzB;AAAA,EACD;AAEA,QAAM,MAAM,KAAK,IAAI,gBAAgB,MAAM,EAAE,EAAE,OAAO,KAAK,EAAE,MAAM,UAAU,MAAM;AAGnF,QAAM,YAAY,IAAI,OAAO,KAAK,EAAE,MAAM,WAAW,KAAK;AAC1D,QAAM,aAAa,UACjB,OAAO,QAAQ,EACf,KAAK,QAAQ,OAAO,EAAE,EACtB,KAAK,SAAS,sBAAsB,EACpC,MAAM,cAAc,KAAK,EACzB,MAAM,WAAW,KAAK,EACtB,GAAG,SAAS,MAAM;AAClB,UAAM,YAAY,KAAK,IAAI,SAAO,IAAI,CAAC,EAAE,KAAK,EAAE,KAAK,IAAI;AACzD,cAAU,UAAU,UAAU,SAAS,EAAE,KAAK,MAAM;AAAA,IAAC,GAAG,QAAQ,IAAI;AACpE,eAAW,KAAK,QAAQ,OAAO,eAAe;AAAA,EAC/C,CAAC;AACF,cAAY;AAAA,IACX;AAAA,IACA,SAAS,CAAC,EAAE,OAAO,QAAQ,CAAC;AAAA,IAC5B,KAAK,IAAI,OAAO,KAAK;AAAA,IACrB,WAAW;AAAA,IACX,WAAW;AAAA,IACX,QAAQ;AAAA,EACT,CAAC;AACF;AAGO,SAAS,4BAA4B,OAAO;AAElD,MAAI,MAAM,OAAO,WAAW,QAAS,MAAK,SAAS,MAAM,OAAO,sBAAsB;AAAA,MACjF;AAEL,QAAM,IAAI,MAAM,UAAU,KAAK,OAAO,IAAI,MAAM,OAAO;AACvD,QAAM,OAAO,KAAK,WAAW;AAC7B,QAAM,IAAI,MAAM,UAAU,KAAK,OAAO,IAAI,MAAM,OAAO,aAAa;AAEpE,aAAW,CAAC,WAAW,OAAO,KAAK,KAAK,gBAAgB,WAAW,IAAI,gBAAgB;AACtF,UAAM,EAAE,IAAI,IAAI,IAAI,IAAI,SAAS,IAAI,QAAQ;AAC7C,QACE,MAAM,KAAK,KAAK,MAAM,WAAW,IAAI,KAAK,IAAI,WAAW,KACzD,YAAY,KAAK,KAAK,MAAM,KAAK,IAAI,KAAK,IAAI,KAAK,KACnD,YAAY,KAAK,KAAK,MAAM,KAAK,IAAI,KAAK,IAAI,KAAK,GACnD;AACD,aAAO;AAAA,IACR;AAAA,EACD;AACD;AAGO,SAAS,6BAA6B,OAAO;AAEnD,MAAI,MAAM,OAAO,WAAW,QAAS,MAAK,SAAS,MAAM,OAAO,sBAAsB;AAAA,MACjF;AAEL,QAAM,IAAI,MAAM,UAAU,KAAK,OAAO,IAAI,MAAM,OAAO;AACvD,QAAM,OAAO,KAAK,WAAW;AAC7B,QAAM,IAAI,MAAM,UAAU,KAAK,OAAO,IAAI,MAAM,OAAO,aAAa;AAEpE,aAAW,CAAC,WAAW,OAAO,KAAK,KAAK,gBAAgB,WAAW,IAAI,gBAAgB;AACtF,UAAM,EAAE,IAAI,IAAI,IAAI,IAAI,SAAS,IAAI,QAAQ;AAC7C,QACE,MAAM,KAAK,KAAK,MAAM,WAAW,IAAI,KAAK,IAAI,WAAW,KACzD,YAAY,KAAK,KAAK,MAAM,KAAK,IAAI,KAAK,IAAI,KAAK,KACnD,YAAY,KAAK,KAAK,MAAM,KAAK,IAAI,KAAK,IAAI,KAAK,GACnD;AACD,aAAO;AAAA,IACR;AAAA,EACD;AACD;AAEO,SAAS,iBAAiB,QAAQ,UAAU;AAClD,QAAM,KAAK,KAAK,OAAO,SAAS,OAAO;AACvC,QAAM,WAAW,KAAK,OAAO;AAC7B,QAAM,kBAAkB,GAAG;AAC3B,QAAM,uBAAuB,GAAG,eAAe,QAAQ,CAAC;AACxD,SACE,OAAO,QAAQ,EAEf,MAAM;AAAA,IACN,OAAO;AAAA,IACP,UAAU,MAAM,KAAK,aAAa,IAAI,UAAU;AAAA,IAChD,WAAW;AAAA,IACX,MAAM;AAAA,MACL;AAAA,QACC,OAAO,WAAW,GAAG,OAAO;AAAA,QAC5B,OAAO,oBAAoB,GAAG,OAAO,oCAAoC,GAAG,OAAO;AAAA,QACnF,MAAM;AAAA,QACN,WAAW;AAAA,QACX,aAAa;AAAA,QACb,UAAU,WAAW,GAAG,OAAO,aAAa,GAAG,OAAO;AAAA,QACtD,UAAU,aAAW;AACpB,cAAI,CAAC,SAAS;AACb,iBAAK,OAAO,SAAS,YAAY,oBAAoB;AACrD,iBAAK,OAAO,SAAS,YAAY,iBAAiB;AAAA,UACnD,OAAO;AACN,iBAAK,OAAO,WAAW;AACvB,iBAAK,OAAO,SAAS,YAAY,oBAAoB;AACrD,iBAAK,OAAO,SAAS,YAAY,iBAAiB;AAAA,UACnD;AACA,eAAK,IAAI,SAAS;AAAA,YACjB,MAAM;AAAA,YACN,IAAI,KAAK;AAAA,YACT,QAAQ,KAAK;AAAA,UACd,CAAC;AAAA,QACF;AAAA,MACD;AAAA,MACA;AAAA,QACC,OAAO,WAAW,eAAe;AAAA,QACjC,OAAO,oBAAoB,eAAe,oCAAoC,eAAe;AAAA,QAC7F,MAAM;AAAA,QACN,WAAW;AAAA,QACX,aAAa;AAAA,QACb,UAAU,WAAW,eAAe,aAAa,eAAe;AAAA,QAChE,UAAU,aAAW;AACpB,cAAI,CAAC,SAAS;AACb,iBAAK,OAAO,SAAS,YAAY,cAAc;AAC/C,iBAAK,OAAO,SAAS,YAAY,kBAAkB;AAAA,UACpD,OAAO;AACN,iBAAK,OAAO,SAAS,YAAY,cAAc;AAC/C,iBAAK,OAAO,SAAS,YAAY,kBAAkB;AAAA,UACpD;AACA,eAAK,IAAI,SAAS;AAAA,YACjB,MAAM;AAAA,YACN,IAAI,KAAK;AAAA,YACT,QAAQ,KAAK;AAAA,UACd,CAAC;AAAA,QACF;AAAA,MACD;AAAA,MACA;AAAA,QACC,OAAO,QAAQ,eAAe;AAAA,QAC9B,OAAO,wBAAwB,eAAe;AAAA,QAC9C,MAAM;AAAA,QACN,WAAW;AAAA,QACX,aAAa;AAAA,QACb,SAAS;AAAA,UACR,EAAE,OAAO,YAAY,eAAe,UAAU,OAAO,WAAW;AAAA,UAChE,EAAE,OAAO,MAAM,eAAe,SAAS,OAAO,SAAS;AAAA,QACxD;AAAA,QACA,QAAQ,EAAE,SAAS,GAAG,iBAAiB,QAAQ,QAAQ,GAAG,SAAS,eAAe;AAAA,QAClF,gBAAgB,MAAM;AACrB,iBAAO,KAAK,SAAS,YAAY,cAAc,SAAS;AAAA,QACzD;AAAA,MACD;AAAA,MACA;AAAA,QACC,OAAO;AAAA,QACP,OAAO;AAAA,QACP,MAAM;AAAA,QACN,WAAW;AAAA,QACX,aAAa;AAAA,QACb,UAAU;AAAA,QACV,UAAU,aAAW;AACpB,cAAI,CAAC,SAAS;AACb,iBAAK,OAAO,SAAS,YAAY,uBAAuB;AACxD,iBAAK,OAAO,SAAS,YAAY,aAAa;AAAA,UAC/C,OAAO;AACN,iBAAK,OAAO,SAAS,YAAY,uBAAuB;AACxD,iBAAK,OAAO,SAAS,YAAY,aAAa;AAAA,UAC/C;AACA,eAAK,IAAI,SAAS;AAAA,YACjB,MAAM;AAAA,YACN,IAAI,KAAK;AAAA,YACT,QAAQ,KAAK;AAAA,UACd,CAAC;AAAA,QACF;AAAA,MACD;AAAA,MACA;AAAA,QACC,OAAO;AAAA,QACP,OAAO;AAAA,QACP,MAAM;AAAA,QACN,WAAW;AAAA,QACX,aAAa;AAAA,QACb,SAAS;AAAA,MACV;AAAA,MACA;AAAA,QACC,OAAO;AAAA,QACP,OAAO;AAAA,QACP,MAAM;AAAA,QACN,WAAW;AAAA,QACX,aAAa;AAAA,QACb,SAAS;AAAA,MACV;AAAA,MACA;AAAA,QACC,OAAO;AAAA,QACP,OAAO;AAAA,QACP,MAAM;AAAA,QACN,WAAW;AAAA,QACX,aAAa;AAAA,QACb,gBAAgB,MAAM;AACrB,iBAAO,KAAK,SAAS,YAAY,iBAAiB,cAAc;AAAA,QACjE;AAAA,MACD;AAAA,MACA;AAAA,QACC,OAAO;AAAA,QACP,OAAO;AAAA,QACP,MAAM;AAAA,QACN,WAAW;AAAA,QACX,aAAa;AAAA,QACb,gBAAgB,MAAM;AACrB,iBAAO,KAAK,SAAS,YAAY,cAAc,cAAc;AAAA,QAC9D;AAAA,MACD;AAAA,MACA;AAAA,QACC,OAAO;AAAA,QACP,OAAO;AAAA,QACP,MAAM;AAAA,QACN,WAAW;AAAA,QACX,aAAa;AAAA,MACd;AAAA,MACA;AAAA,QACC,OAAO;AAAA,QACP,OAAO;AAAA,QACP,MAAM;AAAA,QACN,WAAW;AAAA,QACX,aAAa;AAAA,QACb,SAAS;AAAA,UACR;AAAA,YACC,OAAO;AAAA,YACP,OAAO;AAAA,YACP,OAAO;AAAA,UACR;AAAA,UACA;AAAA,YACC,OAAO;AAAA,YACP,OAAO;AAAA,YACP,OAAO;AAAA,UACR;AAAA,UACA;AAAA,YACC,OAAO;AAAA,YACP,OAAO;AAAA,YACP,OAAO;AAAA,UACR;AAAA,UACA;AAAA,YACC,OAAO;AAAA,YACP,OAAO;AAAA,YACP,OAAO;AAAA,UACR;AAAA,UACA;AAAA,YACC,OAAO;AAAA,YACP,OAAO;AAAA,YACP,OAAO;AAAA,UACR;AAAA,QACD;AAAA,MACD;AAAA,IACD;AAAA,IACA,cAAc;AAAA,EACf,CAAC,EACA,KAAK,OAAK,EAAE,KAAK,EACjB,MAAM,UAAU,OAAO,EACvB,GAAG,SAAS,QAAQ;AACvB;AAEA,SAAS,yBAAyB,MAAM,KAAK,QAAQ,OAAO;AAC3D,MAAI,OAAO,aAAa,iBAAiB,CAAC,OAAO,OAAO,SAAS,YAAY,sBAAsB;AAClG,UAAM,mBAAmB;AAAA,MACxB,MACE,UAAU,IAAI,EACd,OAAO,WAAY;AACnB,eAAO,eAAO,IAAI,EAAE,KAAK,KAAK;AAAA,MAC/B,CAAC,EACA,KAAK,EACL,QAAQ,IAAI;AAAA,IACf;AACA,qBAAiB,MAAM,WAAW,MAAM;AACxC,UAAM,qBAAqB;AAAA,MAC1B,MACE,UAAU,IAAI,EACd,OAAO,WAAY;AACnB,eAAO,eAAO,IAAI,EAAE,KAAK,KAAK;AAAA,MAC/B,CAAC,EACA,KAAK,EACL,QAAQ,IAAI;AAAA,IACf;AACA,uBAAmB,MAAM,WAAW,MAAM;AAAA,EAC3C;AAGA,MAAI,OAAO,aAAa,iBAAiB,OAAO,OAAO,aAAa,kBAAkB;AACrF,UAAM,cAAc,MAAM,OAAO,MAAM,MAAM,MAAM,OAAO,IAAI,EAAE,KAAK,CAAC;AACtE,gBAAY,OAAO,IAAI,EAAE,KAAK,SAAS,6BAA6B,EAAE,KAAK,kCAAkC;AAE7G,UAAM,MAAM,YAAY,OAAO,IAAI,EAAE,MAAM,WAAW,OAAO,EAAE,MAAM,WAAW,SAAS;AACzF,UAAM,aAAa,IAAI,OAAO,KAAK,EAAE,OAAO,OAAO;AAEnD,UAAM,gBAAgB,KAAK,KAAK,KAAK;AACrC,eACE,OAAO,QAAQ,EACf,KAAK,UAAU,EACf,GAAG,SAAS,MAAM;AAClB,UAAI,IAAI,MAAM;AACd,YAAM,UAAU,IAAI,IAAI,EAAE,OAAO,KAAK,EAAE,MAAM,WAAW,KAAK;AAC9D,cACE,KAAK,YAAY,CAAC,EAClB,MAAM,WAAW,KAAK,EACtB,MAAM,mBAAmB,WAAW,EACpC,MAAM,UAAU,SAAS,EACzB,MAAM,iBAAiB,MAAM,EAC7B,KAAK,aAAa,EAClB,GAAG,SAAS,MAAM,cAAc,MAAM,CAAC,EACvC,GAAG,SAAS,WAAS;AACrB,YAAI,MAAM,OAAO,QAAS,OAAM,OAAO,MAAM;AAAA,MAC9C,CAAC;AACF,YAAM,iBAAiB,IAAI,IAAI,EAAE,OAAO,KAAK;AAC7C,aAAO,sBAAsB,cAAc;AAAA,IAC5C,CAAC;AAAA,EACH;AACD;",
+  "names": ["event", "d"]
+}

package/dist/chunk-UPNKFGTN.js

@@ -0,0 +1,100 @@
+import {
+  SearchHandler,
+  fillTermWrapper,
+  table2col,
+  termsettingInit
+} from "./chunk-LYULXXGR.js";
+
+// plots/summarizeMutationDiagnosis.ts
+async function makeChartBtnMenu(holder, chartsInstance) {
+  let dictTw;
+  {
+    const t = chartsInstance.app.vocabApi.termdbConfig.defaultTw4correlationPlot?.disease;
+    if (!t) throw "defaultTw4correlationPlot missing";
+    dictTw = structuredClone(t);
+    await fillTermWrapper(dictTw, chartsInstance.app.vocabApi);
+  }
+  const table = table2col({
+    holder: holder.append("div"),
+    margin: "0px 10px 10px 10px",
+    cellPadding: "10px"
+  });
+  {
+    const [td1, td2] = table.addRow();
+    td1.text("Mutation Variable");
+    const searchDiv = td2.append("div");
+    const geneSearchInst = new SearchHandler();
+    geneSearchInst.init({
+      holder: searchDiv,
+      app: chartsInstance.app,
+      // required to supply "opts.app.vocabApi" for the search ui
+      genomeObj: chartsInstance.app.opts.genome,
+      msg: "Hit ENTER to launch plot.",
+      callback: async (geneTw) => {
+        await fillTermWrapper(geneTw, chartsInstance.app.vocabApi);
+        launchPlot({
+          tw1: dictTw,
+          tw2: geneTw,
+          chartsInstance,
+          holder
+        });
+      }
+    });
+    searchDiv.style("padding", "0px 0px 5px 0px");
+  }
+  {
+    const [td1, td2] = table.addRow();
+    td1.text("Compare Mutations Against");
+    const pillDiv = td2.append("div"), waitDiv = td2.append("div").style("font-size", ".7em").text("LOADING ...");
+    const pill = await termsettingInit({
+      menuOptions: "{edit,replace}",
+      /** presumably this usecase let it restrict to dictionary term ui, and hide genomic queries
+      target="filter" works for gdc since in gdc ds it is overriding filter to dict
+      but is not a general fix for non-gdc ds, which Replace menu will launch genomic+dict options
+      maybe this is okay for non-gdc ds as the default dictTw is meaningful
+      */
+      usecase: { target: "filter" },
+      vocabApi: chartsInstance.app.vocabApi,
+      holder: pillDiv,
+      callback: async (tw) => {
+        waitDiv.text("LOADING ...");
+        try {
+          await pill.main(tw);
+          dictTw = tw;
+          waitDiv.text("Click to edit/replace the variable before searching gene.");
+        } catch (e) {
+          waitDiv.text("Error: " + (e.message || e));
+        }
+      }
+    });
+    try {
+      await fillTermWrapper(dictTw, chartsInstance.app.vocabApi);
+      await pill.main(dictTw);
+      waitDiv.text("Click to edit/replace the variable before searching gene.");
+    } catch (e) {
+      waitDiv.text("Error: " + (e.message || e));
+    }
+  }
+}
+function launchPlot({ tw1, tw2, chartsInstance, holder }) {
+  const chart = {
+    config: {
+      chartType: tw1?.term?.type == "survival" ? "survival" : "summary",
+      // TODO define sandbox header with gene+term name
+      term: tw1,
+      term2: tw2
+    }
+  };
+  chartsInstance.plotCreate(chart);
+  holder.selectAll("*").remove();
+  holder.append("div").style("margin", "20px").text("LOADING CHART ...");
+  setTimeout(() => {
+    holder.style("display", "none");
+  }, 1e3);
+}
+
+export {
+  makeChartBtnMenu,
+  launchPlot
+};
+//# sourceMappingURL=chunk-UPNKFGTN.js.map