@sjcrh/proteinpaint-client 2.191.4 → 2.192.0

package/dist/chunk-BKPDYW5T.js

@@ -0,0 +1,177 @@
+import {
+  basis_default,
+  line_default
+} from "./chunk-TJYRBEBK.js";
+import {
+  axisTop
+} from "./chunk-LOZEKOES.js";
+import {
+  linear
+} from "./chunk-SOTB4FRE.js";
+import {
+  decimalPlacesUntilFirstNonZero
+} from "./chunk-TLT4YIG3.js";
+import {
+  brushX
+} from "./chunk-KYBIQBXE.js";
+import {
+  rgb
+} from "./chunk-OMR2DT66.js";
+
+// dom/numericRangeInput.ts
+var NumericRangeInput = class {
+  constructor(holder, range, callback, opts) {
+    this.input = holder.append("input").attr("name", "rangeInput").attr("aria-label", "Leave blank for the allowed minimum value").style("width", opts?.width || "250px").style("margin", "3px 5px").on("change", () => {
+      try {
+        this.parseRange();
+      } catch (ex) {
+        alert(ex);
+        this.setRange();
+      }
+    });
+    this.setRange(range);
+    this.callback = callback;
+  }
+  getInput() {
+    return this.input;
+  }
+  parseRange() {
+    const str = this.input.node().value;
+    const new_range = parseRange(str);
+    if (this.range?.min != void 0) {
+      if (!new_range.startunbounded && this.range?.min > new_range.start) throw "Invalid start value < minimum allowed";
+      if (!new_range.stopunbounded && this.range?.min >= new_range.stop) throw "Invalid stop value >= minimum allowed";
+    }
+    if (this.range?.max != void 0) {
+      if (!new_range.stopunbounded && this.range?.max < new_range.stop) throw "Invalid stop value > maximum allowed";
+      if (!new_range.startunbounded && new_range.start >= this.range?.max)
+        throw "Invalid start value >= maximum allowed";
+    }
+    this.range = new_range;
+    this.callback(new_range);
+    return new_range;
+  }
+  getRange() {
+    return this.range;
+  }
+  setRange(range) {
+    if (!range) range = this.range;
+    else this.range = range;
+    if (!range) return;
+    const start = range.start != void 0 ? `${range.start} <=` : "";
+    const stop = range.stop != void 0 ? `<= ${range.stop}` : "";
+    this.input.node().value = range.value != void 0 ? ` x=${range.value} ` : `${start} x ${stop}`;
+  }
+};
+function parseRange(str) {
+  if (!str) throw "Empty range";
+  const tokens = str.replace(/\s/g, "").split("x");
+  let start, stop, startinclusive, stopinclusive, value;
+  if (tokens[0]) parseRangeToken(tokens[0]);
+  if (tokens[1]) parseRangeToken(tokens[1]);
+  if (value != void 0) return { value, label: `x = ${value}` };
+  const startunbounded = start === void 0;
+  const stopunbounded = stop === void 0;
+  if (!startunbounded && !stopunbounded && start > stop) throw "start must be lower than stop";
+  return { start, stop, value, startinclusive, stopinclusive, startunbounded, stopunbounded };
+  function parseRangeToken(rangeToken) {
+    const floatExpr = "[+-]?\\d+(\\.\\d+)?";
+    if (new RegExp(`^${floatExpr}<$`).test(rangeToken) || new RegExp(`^>${floatExpr}$`).test(rangeToken)) {
+      start = parseFloat(rangeToken.match(floatExpr));
+      startinclusive = false;
+    } else if (new RegExp(`^${floatExpr}<=$`).test(rangeToken) || new RegExp(`^>=${floatExpr}$`).test(rangeToken)) {
+      start = parseFloat(rangeToken.match(floatExpr));
+      startinclusive = true;
+    } else if (new RegExp(`^${floatExpr}>$`).test(rangeToken) || new RegExp(`^<${floatExpr}$`).test(rangeToken)) {
+      stop = parseFloat(rangeToken.match(floatExpr));
+      stopinclusive = false;
+    } else if (new RegExp(`^${floatExpr}>=$`).test(rangeToken) || new RegExp(`^<=${floatExpr}$`).test(rangeToken)) {
+      stop = parseFloat(rangeToken.match(floatExpr));
+      stopinclusive = true;
+    } else if (new RegExp(`^${floatExpr}=$`).test(rangeToken) || new RegExp(`^=${floatExpr}$`).test(rangeToken)) {
+      value = parseFloat(rangeToken.match(floatExpr));
+      stopinclusive = true;
+      startinclusive = true;
+    } else throw `Could not parse expression '${rangeToken}'`;
+  }
+}
+
+// dom/violinRenderer.js
+var violinRenderer = class {
+  constructor({
+    holder,
+    rd,
+    radius = 10,
+    width = 500,
+    height = 100,
+    shiftx = 20,
+    shifty = 20,
+    callback = null,
+    scaleFactor = 1
+  }) {
+    this.holder = holder;
+    this.rd = rd;
+    this.vd = rd.charts?.[""]?.plots?.[0];
+    if (!this.vd) throw "No density plot data to render.";
+    this.width = width;
+    this.height = height;
+    this.radius = radius;
+    this.callback = callback;
+    this.shiftx = shiftx;
+    this.shifty = shifty;
+    this.svg = holder.append("svg").attr("width", `${width + 50}px`).attr("height", `${height + 50}px`);
+    this.axisScale = linear().domain([rd.min, rd.max]).range([0, width]);
+    this.axisScaleUI = linear().domain([rd.min * scaleFactor, rd.max * scaleFactor]).range([0, width]);
+    this.wScale = linear().domain([this.vd.density.densityMax, this.vd.density.densityMin]).range([height * 0.45, 0]);
+  }
+  render() {
+    this.svg.selectAll("*").remove();
+    this.violinG = this.svg.append("g").attr("transform", `translate(${this.shiftx}, ${this.height / 2 + this.shifty})`);
+    this.brushG = this.svg.append("g").attr("transform", `translate(${this.shiftx}, ${this.shifty})`);
+    this.scaleG = this.svg.append("g").attr("transform", `translate(${this.shiftx}, ${this.shifty})`);
+    this.scaleG.call(axisTop(this.axisScaleUI).tickValues(this.axisScaleUI.ticks()));
+    this.renderArea(false);
+    this.renderArea(true);
+    if (this.vd.src) {
+      this.violinG.append("image").classed("sjpp-beans-img", true).attr("xlink:href", this.vd.src).attr("transform", `translate(0, -${this.radius / 2})`).attr("width", this.width);
+    }
+    if (this.callback)
+      this.svg.append("g").call(
+        brushX().extent([
+          [this.shiftx, this.shifty],
+          [this.width + this.shiftx, this.height + this.shifty]
+        ]).on("end", async (event) => {
+          const selection = event.selection;
+          if (!selection) return;
+          const range_start = this.axisScale.invert(selection[0] - this.shiftx);
+          const range_end = this.axisScale.invert(selection[1] - this.shiftx);
+          this.callback({ range_start, range_end });
+        })
+      );
+  }
+  renderArea(invert) {
+    if (this.vd.densityMax == 0) return;
+    const areaBuilder = line_default().curve(basis_default).x((d) => this.axisScale(d.x0)).y((d) => invert ? -this.wScale(d.density) : this.wScale(d.density));
+    const color = this.vd.color || "#dddddd";
+    this.violinG.append("path").style("fill", color).style("opacity", 0).attr("stroke", rgb(color).darker()).attr("stroke-width", 1).attr("stroke-linejoin", "round").style("opacity", "0.8").attr("d", areaBuilder(this.vd.density.bins));
+  }
+};
+
+// dom/niceNumLabels.ts
+function niceNumLabels(nums) {
+  const sorted = nums.sort((a, b) => a - b);
+  const abs = Math.abs(sorted[0] - sorted[sorted.length - 1]);
+  const zeroDecimalNum = decimalPlacesUntilFirstNonZero(abs);
+  const decimals2Show = abs >= 10 ? 0 : abs >= 1 ? 1 : zeroDecimalNum + 2;
+  return nums.map((num) => {
+    if (Math.abs(num) < 1 && decimals2Show == 0) return Number(num.toPrecision(1));
+    return Number(num.toFixed(decimals2Show));
+  });
+}
+
+export {
+  NumericRangeInput,
+  violinRenderer,
+  niceNumLabels
+};
+//# sourceMappingURL=chunk-BKPDYW5T.js.map

package/dist/chunk-BMS32SNA.js

@@ -0,0 +1,37 @@
+import {
+  addGeneSearchbox,
+  getGEunit
+} from "./chunk-KUZPTJJO.js";
+import {
+  Menu
+} from "./chunk-HYOEWQ5P.js";
+import {
+  TermTypes
+} from "./chunk-2U2CP2Y2.js";
+
+// termdb/handlers/geneExpression.ts
+var SearchHandler = class {
+  init(opts) {
+    this.callback = opts.callback;
+    this.app = opts.app;
+    const holder = opts.holder.append("div").style("padding", "10px 0px");
+    const geneSearch = addGeneSearchbox({
+      tip: new Menu({ padding: "0px" }),
+      genome: opts.genomeObj,
+      row: holder,
+      searchOnly: "gene",
+      callback: () => this.selectGene(geneSearch.geneSymbol)
+    });
+  }
+  async selectGene(gene) {
+    const unit = getGEunit(this.app.vocabApi);
+    const name = `${gene} ${unit}`;
+    if (!gene) throw new Error("No gene selected");
+    this.callback({ gene, name, type: TermTypes.GENE_EXPRESSION });
+  }
+};
+
+export {
+  SearchHandler
+};
+//# sourceMappingURL=chunk-BMS32SNA.js.map

package/dist/chunk-C4BCMAIK.js

@@ -0,0 +1,188 @@
+import {
+  __glob
+} from "./chunk-HFNDKYVF.js";
+
+// import("../plots/**/*.js") in plots/importPlot.js
+var globImport_plots_js = __glob({
+  "../plots/barchart.data.js": () => import("./barchart.data-ZWF6EVJH.js"),
+  "../plots/barchart.events.js": () => import("./barchart.events-XON2ANOC.js"),
+  "../plots/barchart.js": () => import("./barchart-MXSPTKV4.js"),
+  "../plots/bars.renderer.js": () => import("./bars.renderer-57KSYAAT.js"),
+  "../plots/bars.settings.js": () => import("./bars.settings-SDU7PZOS.js"),
+  "../plots/brainImaging.js": () => import("./brainImaging-P3AF3C5N.js"),
+  "../plots/controls.btns.js": () => import("./controls.btns-AP67YWKW.js"),
+  "../plots/controls.config.js": () => import("./controls.config-IBF5ILFP.js"),
+  "../plots/controls.js": () => import("./controls-7TDB75LK.js"),
+  "../plots/cuminc.js": () => import("./cuminc-CAHPKW7W.js"),
+  "../plots/dataDownload.js": () => import("./dataDownload-SOUCBKXM.js"),
+  "../plots/dictionary.js": () => import("./dictionary-RUT5VXDD.js"),
+  "../plots/dziviewer/plot.dzi.js": () => import("./plot.dzi-IA2SOFUD.js"),
+  "../plots/facet.js": () => import("./facet-T5ZX7ZGV.js"),
+  "../plots/gb/test/genomeBrowser.spec.js": () => import("./genomeBrowser.spec-EDILOQON.js"),
+  "../plots/geneExpression.js": () => import("./geneExpression-ZHQH6SNA.js"),
+  "../plots/geneORA.js": () => import("./geneORA-YLIRUMCZ.js"),
+  "../plots/geneset.js": () => import("./geneset-ACRMGBJO.js"),
+  "../plots/gsea.js": () => import("./gsea-2PQ5HNNT.js"),
+  "../plots/hierCluster.js": () => import("./hierCluster-H5HB7FPW.js"),
+  "../plots/importPlot.js": () => import("./importPlot-DQFWY5A7.js"),
+  "../plots/matrix.js": () => import("./matrix-7BFYR6QL.js"),
+  "../plots/matrix/hierCluster.config.js": () => import("./hierCluster.config-6UIJWCND.js"),
+  "../plots/matrix/hierCluster.interactivity.js": () => import("./hierCluster.interactivity-7MW6ZT6O.js"),
+  "../plots/matrix/hierCluster.js": () => import("./hierCluster-L3LCP2II.js"),
+  "../plots/matrix/hierCluster.renderers.js": () => import("./hierCluster.renderers-F34EVY5J.js"),
+  "../plots/matrix/matrix.cells.js": () => import("./matrix.cells-OTAXAJ4N.js"),
+  "../plots/matrix/matrix.cluster.js": () => import("./matrix.cluster-NU5CYRUT.js"),
+  "../plots/matrix/matrix.config.js": () => import("./matrix.config-AL4WSFZ7.js"),
+  "../plots/matrix/matrix.data.js": () => import("./matrix.data-BDHCSN2G.js"),
+  "../plots/matrix/matrix.dom.js": () => import("./matrix.dom-F7AN3QGE.js"),
+  "../plots/matrix/matrix.groups.js": () => import("./matrix.groups-MV2D2636.js"),
+  "../plots/matrix/matrix.interactivity.js": () => import("./matrix.interactivity-H7EJW3P2.js"),
+  "../plots/matrix/matrix.js": () => import("./matrix-USAB2CHO.js"),
+  "../plots/matrix/matrix.layout.js": () => import("./matrix.layout-7CAS2IBO.js"),
+  "../plots/matrix/matrix.legend.js": () => import("./matrix.legend-JDVG2JDF.js"),
+  "../plots/matrix/matrix.renderers.js": () => import("./matrix.renderers-PDR5FIBC.js"),
+  "../plots/matrix/matrix.serieses.js": () => import("./matrix.serieses-QVDS5HKK.js"),
+  "../plots/matrix/matrix.sort.js": () => import("./matrix.sort-HCK4CSTJ.js"),
+  "../plots/matrix/matrix.sorterUi.js": () => import("./matrix.sorterUi-XGBQOPG4.js"),
+  "../plots/matrix/test/hierCluster.integration.spec.js": () => import("./hierCluster.integration.spec-EVAPT2VF.js"),
+  "../plots/matrix/test/matrix.integration.spec.js": () => import("./matrix.integration.spec-DESORC2Y.js"),
+  "../plots/matrix/test/matrix.sort.unit.spec.js": () => import("./matrix.sort.unit.spec-2GC4E26N.js"),
+  "../plots/matrix/test/matrix.sorterUi.unit.spec.js": () => import("./matrix.sorterUi.unit.spec-BJQKDU2F.js"),
+  "../plots/matrix/test/oncomatrix.spec.js": () => import("./oncomatrix.spec-YGQYIUDT.js"),
+  "../plots/plot.brainImaging.js": () => import("./plot.brainImaging-6KVNPPMT.js"),
+  "../plots/plot.disco.js": () => import("./plot.disco-ZFH5RK6B.js"),
+  "../plots/plot.ssgq.js": () => import("./plot.ssgq-QARGQVKB.js"),
+  "../plots/regression.inputs.js": () => import("./regression.inputs-42LY4MEZ.js"),
+  "../plots/regression.inputs.term.js": () => import("./regression.inputs.term-TTUFFPG6.js"),
+  "../plots/regression.inputs.values.table.js": () => import("./regression.inputs.values.table-CJAPTSMS.js"),
+  "../plots/regression.js": () => import("./regression-DLPBCDZT.js"),
+  "../plots/regression.results.js": () => import("./regression.results-IA3C7SHR.js"),
+  "../plots/sampleView.js": () => import("./sampleView-CZF7U23I.js"),
+  "../plots/scatter/test/scatter.integration.spec.js": () => import("./scatter.integration.spec-CRMLFO4J.js"),
+  "../plots/singleCellPlot.js": () => import("./singleCellPlot-6EZ6JXCM.js"),
+  "../plots/stattable.js": () => import("./stattable-MDABSW3F.js"),
+  "../plots/survival/test/survival.integration.spec.js": () => import("./survival.integration.spec-EUAAALVW.js"),
+  "../plots/table.js": () => import("./table-MVX3IMAL.js"),
+  "../plots/test/barchart.integration.spec.js": () => import("./barchart.integration.spec-PJIENJGT.js"),
+  "../plots/test/cuminc.integration.spec.js": () => import("./cuminc.integration.spec-NNSQGBRI.js"),
+  "../plots/test/dataDownload.integration.spec.js": () => import("./dataDownload.integration.spec-C6TLWSSO.js"),
+  "../plots/test/expclust.gdc.spec.js": () => import("./expclust.gdc.spec-DTBFOXBC.js"),
+  "../plots/test/regression.integration.spec.js": () => import("./regression.integration.spec-UDA26OGS.js"),
+  "../plots/test/regression.spec.js": () => import("./regression.spec-HEXCL3QV.js"),
+  "../plots/test/sampleScatter.spec.js": () => import("./sampleScatter.spec-N6V4BQ5Q.js"),
+  "../plots/test/summary.integration.spec.js": () => import("./summary.integration.spec-SLIIM4HN.js"),
+  "../plots/test/violin.integration.spec.js": () => import("./violin.integration.spec-5CLYJSAR.js"),
+  "../plots/violin.interactivity.js": () => import("./violin.interactivity-KXVKTT22.js"),
+  "../plots/violin.js": () => import("./violin-NBZTGGYF.js"),
+  "../plots/violin.renderer.js": () => import("./violin.renderer-37OF6K7Q.js"),
+  "../plots/volcano/test/testData.js": () => import("./testData-LEJ53F2K.js"),
+  "../plots/wsiviewer/plot.wsi.js": () => import("./plot.wsi-C2DULA7U.js")
+});
+
+// plots/importPlot.js
+async function importPlot(chartType, notFoundMessage = "") {
+  switch (chartType) {
+    case "AIProjectAdmin":
+      return await import("./AIProjectAdmin-AEXQY5LY.js");
+    case "barchart":
+      return await import("./barchart-MXSPTKV4.js");
+    case "boxplot":
+      return await import("./BoxPlot-HDP3SIGU.js");
+    case "correlationVolcano":
+      return await import("./CorrelationVolcano-V2E566XL.js");
+    case "DEinput":
+      return await import("./DEinput-P2HOQC4Z.js");
+    case "dictionary":
+      return await import("./dictionary-RUT5VXDD.js");
+    case "differentialAnalysis":
+      return await import("./DifferentialAnalysis-2Z6BHS7A.js");
+    case "Disco":
+      return await import("./Disco-ZLC54X7T.js");
+    case "dmr":
+      return await import("./DmrPlot-OEJRGNI3.js");
+    case "DziViewer":
+      return await import("./DziViewer-6737GC22.js");
+    case "GeneExpInput":
+      return await import("./GeneExpInput-PWLPDLYT.js");
+    case "genomeBrowser":
+      return await import("./GB-2GHDD3MW.js");
+    case "grin2":
+      return await import("./grin2-GNB35CMF.js");
+    case "gsea":
+      return await import("./gsea-2PQ5HNNT.js");
+    case "imagePlot":
+      return await import("./imagePlot-RSFZ2OKD.js");
+    case "report":
+      return await import("./report-4CFOWNPJ.js");
+    case "runChart2":
+    //See frequencyChart
+    case "frequencyChart":
+      return await import("./RunChart2-SQ6TFOHD.js");
+    case "profileBarchart2":
+      return await import("./barchart2-HIKBGSSE.js");
+    case "profileForms":
+      return await import("./profileForms-Y6ZBMZWQ.js");
+    case "profileForms2":
+      return await import("./forms2-S5OGBFKL.js");
+    case "profilePlot":
+      return await import("./profilePlot-SVI3QKMD.js");
+    case "profilePolar2":
+      return await import("./polar2-3HS3QBU6.js");
+    case "profileRadar2":
+      return await import("./radar2-TTQZLARY.js");
+    case "profileRadarFacility2":
+      return await import("./radarFacility2-YGS56QUA.js");
+    case "proteinView":
+      return await import("./proteinView-YPFJSBL7.js");
+    case "numericDictTermCluster":
+      return await import("./numericDictTermCluster-WIVO33AV.js");
+    case "proteomeAbundance":
+      return await import("./proteomeAbundance-NQ4635NL.js");
+    case "animatedBubbleChart":
+      return await import("./animatedBubbleChart-Q6Z5W2UL.js");
+    case "brainRegions":
+      return await import("./brainRegions-YA2H2QOI.js");
+    case "geneRanking":
+      return await import("./geneRanking-JDJXNGEC.js");
+    case "ProteomeInput":
+      return await import("./ProteomeInput-AUXWUIWK.js");
+    case "sampleScatter":
+      return await import("./scatter-EY7HQVCO.js");
+    case "sc":
+      return await import("./SC-OWJ6LYIW.js");
+    case "summarizeCnvGeneexp":
+      return await import("./summarizeCnvGeneexp-LYVDZXXD.js");
+    case "summarizeGeneexpSurvival":
+      return await import("./summarizeGeneexpSurvival-Y52TGAHF.js");
+    case "summarizeMutationDiagnosis":
+      return await import("./summarizeMutationDiagnosis-HZKXHOOQ.js");
+    case "summarizeMutationSurvival":
+      return await import("./summarizeMutationSurvival-TU7TQYFQ.js");
+    case "summarizeMutationCnv":
+      return await import("./summarizeMutationCnv-6EEJT3PV.js");
+    case "summaryInput":
+      return await import("./summaryInput-6HROPKCE.js");
+    case "summary":
+      return await import("./summary-4QQZUAMU.js");
+    case "survival":
+      return await import("./survival-QSL2KDKD.js");
+    case "table":
+      return await import("./table-MVX3IMAL.js");
+    case "violin":
+      return await import("./violin-NBZTGGYF.js");
+    case "volcano":
+      return await import("./Volcano-XHDH6UN7.js");
+    case "WSISamplesPlot":
+      return await import("./WsiSamplesPlot-YUOAWG2A.js");
+    case "WSIViewer":
+      return await import("./WSIViewer-WT2QV747.js");
+    default:
+      if (notFoundMessage) throw notFoundMessage;
+      return await globImport_plots_js(`../plots/${chartType}.js`);
+  }
+}
+
+export {
+  importPlot
+};
+//# sourceMappingURL=chunk-C4BCMAIK.js.map

package/dist/chunk-C4BCMAIK.js.map

@@ -0,0 +1,7 @@
+{
+  "version": 3,
+  "sources": ["../plots/importPlot.js"],
+  "sourcesContent": ["export async function importPlot(chartType, notFoundMessage = '') {\n\t// TODO: move to dynamic import of exact plot names here, instead of string-pattern,\n\t// so that the bundler does not have to guess code file extension, directory names and letter casing\n\tswitch (chartType) {\n\t\tcase 'AIProjectAdmin':\n\t\t\treturn await import('./aiProjectAdmin/AIProjectAdmin.ts')\n\n\t\tcase 'barchart':\n\t\t\treturn await import(`./barchart.js`)\n\n\t\tcase 'boxplot':\n\t\t\treturn await import(`./boxplot/BoxPlot.ts`)\n\n\t\tcase 'correlationVolcano':\n\t\t\treturn await import(`./corrVolcano/CorrelationVolcano.ts`)\n\n\t\tcase 'DEinput':\n\t\t\treturn await import(`./DEinput.ts`)\n\n\t\tcase 'dictionary':\n\t\t\treturn await import(`./dictionary.js`)\n\n\t\tcase 'differentialAnalysis':\n\t\t\treturn await import(`./diffAnalysis/DifferentialAnalysis.ts`)\n\n\t\tcase 'Disco':\n\t\t\treturn await import('./disco/Disco.ts')\n\n\t\tcase 'dmr':\n\t\t\treturn await import('./dmr/DmrPlot.ts')\n\n\t\tcase 'DziViewer':\n\t\t\treturn await import(`./dziviewer/DziViewer.ts`)\n\n\t\tcase 'GeneExpInput':\n\t\t\treturn await import(`./GeneExpInput.ts`)\n\n\t\tcase 'genomeBrowser':\n\t\t\treturn await import('./gb/GB.ts')\n\n\t\tcase 'grin2':\n\t\t\treturn await import('./grin2/grin2')\n\n\t\tcase 'gsea':\n\t\t\treturn await import(`./gsea.js`)\n\n\t\tcase 'imagePlot':\n\t\t\treturn await import('./imagePlot.ts')\n\n\t\tcase 'report':\n\t\t\treturn await import(`./report/report.ts`)\n\n\t\tcase 'runChart2': //See frequencyChart\n\t\tcase 'frequencyChart':\n\t\t\treturn await import(`./runChart2/RunChart2.ts`)\n\n\t\tcase 'profileBarchart2':\n\t\t\treturn await import('./profile/barchart2.ts')\n\n\t\tcase 'profileForms':\n\t\t\treturn await import('./profile/profileForms.ts')\n\n\t\tcase 'profileForms2':\n\t\t\treturn await import('./profile/forms2.ts')\n\n\t\tcase 'profilePlot':\n\t\t\treturn await import('./profile/profilePlot.ts')\n\n\t\tcase 'profilePolar2':\n\t\t\treturn await import('./profile/polar2.ts')\n\n\t\tcase 'profileRadar2':\n\t\t\treturn await import('./profile/radar2.ts')\n\n\t\tcase 'profileRadarFacility2':\n\t\t\treturn await import('./profile/radarFacility2.ts')\n\n\t\tcase 'proteinView':\n\t\t\treturn await import(`./proteinView.ts`)\n\n\t\tcase 'numericDictTermCluster':\n\t\t\treturn await import(`./numericDictTermCluster.ts`)\n\n\t\tcase 'proteomeAbundance':\n\t\t\treturn await import(`./proteomeAbundance.ts`)\n\n\t\tcase 'animatedBubbleChart':\n\t\t\treturn await import(`./animatedBubbleChart.ts`)\n\n\t\tcase 'brainRegions':\n\t\t\treturn await import('./brainRegions.ts')\n\n\t\tcase 'geneRanking':\n\t\t\treturn await import(`./geneRanking.ts`)\n\n\t\tcase 'ProteomeInput':\n\t\t\treturn await import('./ProteomeInput.ts')\n\n\t\tcase 'sampleScatter':\n\t\t\treturn await import(`./scatter/scatter.js`)\n\n\t\tcase 'sc':\n\t\t\treturn await import('./sc/SC.ts')\n\n\t\tcase 'summarizeCnvGeneexp':\n\t\t\treturn await import(`./summarizeCnvGeneexp.ts`)\n\n\t\tcase 'summarizeGeneexpSurvival':\n\t\t\treturn await import(`./summarizeGeneexpSurvival.ts`)\n\n\t\tcase 'summarizeMutationDiagnosis':\n\t\t\treturn await import(`./summarizeMutationDiagnosis.ts`)\n\n\t\tcase 'summarizeMutationSurvival':\n\t\t\treturn await import(`./summarizeMutationSurvival.ts`)\n\n\t\tcase 'summarizeMutationCnv':\n\t\t\treturn await import(`./summarizeMutationCnv.ts`)\n\n\t\tcase 'summaryInput':\n\t\t\treturn await import(`./summaryInput.ts`)\n\n\t\tcase 'summary':\n\t\t\treturn await import(`./summary.ts`)\n\n\t\tcase 'survival':\n\t\t\treturn await import(`./survival/survival.js`)\n\n\t\tcase 'table':\n\t\t\treturn await import(`./table.js`)\n\n\t\tcase 'violin':\n\t\t\treturn await import(`./violin.js`)\n\n\t\tcase 'volcano':\n\t\t\treturn await import(`./volcano/Volcano.ts`)\n\n\t\tcase 'WSISamplesPlot':\n\t\t\treturn await import('./wsisamples/WsiSamplesPlot.ts')\n\n\t\tcase 'WSIViewer':\n\t\t\treturn await import('./wsiviewer/WSIViewer.ts')\n\n\t\tdefault:\n\t\t\t// temporary option to force an error, to bypass the default filename matching\n\t\t\tif (notFoundMessage) throw notFoundMessage\n\n\t\t\t// TODO: should always throw here once all chart types are handled separately as cases;\n\t\t\t// the pattern matching below is problematic because:\n\t\t\t// - it matches non-plot code file names\n\t\t\t// - it assumes a non-typescript, .js file extension\n\t\t\t// - it doesn't handle plot code that are organized under its own subdirectory\n\t\t\treturn await import(`../plots/${chartType}.js`)\n\t}\n}\n"],
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