@sjcrh/proteinpaint-client 2.183.0 → 2.183.1

package/dist/chunk-A742TQD2.js

@@ -1,615 +0,0 @@
-import {
-  DownloadMenu,
-  PlotBase,
-  controlsInit,
-  fillTermWrapper,
-  fillTwLst,
-  getCategoricalTermFilter,
-  getCombinedTermFilter
-} from "./chunk-OXJ2TWDO.js";
-import {
-  importPlot
-} from "./chunk-V6DLLX4N.js";
-import {
-  Menu
-} from "./chunk-A6TQGNDQ.js";
-import {
-  icons
-} from "./chunk-5EF5U7MX.js";
-import {
-  select_default
-} from "./chunk-NDWTN4U5.js";
-
-// plots/profile/profilePlot.ts
-var orderedIncomes = ["Low income", "Lower middle income", "Upper middle income", "High income"];
-var orderedVolumes = [
-  "Small (1-25 annual newly diagnoses)",
-  "Medium (26-80 annual newly diagnoses)",
-  "Large (81-120 annual newly diagnoses)",
-  "Very large (>120 annual newly diagnoses)"
-];
-var ABBREV_COHORT = 0;
-var FULL_COHORT = 1;
-var profilePlot = class extends PlotBase {
-  constructor(opts, type) {
-    super(opts);
-    this.type = type;
-    this.downloadCount = 0;
-    this.tip = new Menu({ padding: "4px", offsetX: 10, offsetY: 15 });
-    this.scoreTerms = [];
-    this.scScoreTerms = [];
-    this.isRadarFacility = false;
-    this.components = { plots: {} };
-  }
-  //extracts the relevant state from the appState: config, termfilter, vocab, login info
-  getState(appState) {
-    const config = appState.plots.find((p) => p.id === this.id);
-    if (!config) throw `No plot with id='${this.id}' found`;
-    const { logged, sites, user } = getProfileLogin(this.app, appState.activeCohort);
-    const site = sites?.[0];
-    return {
-      config,
-      termfilter: appState.termfilter,
-      dslabel: appState.vocab.dslabel,
-      termdbConfig: appState.termdbConfig,
-      vocab: appState.vocab,
-      logged,
-      //later change to read login info
-      site,
-      sites,
-      user,
-      activeCohort: appState.activeCohort,
-      //Find plots where I am a parent. Here the child is a second plot for comparison
-      plots: appState.plots.filter((p) => p.parentId === this.id)
-      //this property is needed to indicate that child plots need to be added to the appState plots
-    };
-  }
-  //refers to the view where all the filters are shown and not the preselected site
-  isAggregate() {
-    if (!this.state.logged) return true;
-    if (this.settings.isAggregate) return true;
-    if (this.state.sites?.length > 1 || this.state.user == "admin" || this.isRadarFacility) return true;
-    return false;
-  }
-  //initializes the plot elements
-  async init(appState) {
-    const config = appState.plots.find((p) => p.id === this.id);
-    const state = this.getState(appState);
-    if (this.opts.header) {
-      let chartName = config.chartType.match(/[A-Z][a-z]+/g);
-      chartName = chartName.join(" ");
-      chartName = config.headerTitle ? config.headerTitle + ` / ${state.user}` : chartName + ` / ${state.user}`;
-      this.opts.header.style("text-transform", "capitalize").text(chartName);
-    }
-    const div = this.opts.holder.append("div").style("display", "inline-block");
-    const leftDiv = div.append("div").style("display", "inline-block").style("vertical-align", "top");
-    const rightDiv = div.append("div").style("display", "inline-block").style("vertical-align", "top");
-    const controlsDiv = leftDiv.append("div").style("display", "inline-block").style("font-size", "0.9em");
-    const iconsDiv = leftDiv.append("div").style("margin-top", "10px").style("padding-left", "12px");
-    const holder = rightDiv.insert("div").style("display", "inline-block");
-    const plotDiv = holder.append("div");
-    this.dom = {
-      controlsDiv,
-      holder,
-      iconsDiv,
-      rightDiv,
-      plotDiv
-    };
-    select_default(".sjpp-output-sandbox-content").on("scroll", (event) => {
-      if (this.onMouseOut) this.onMouseOut(event);
-    });
-    this.dom.rightDiv.on("mousemove", (event) => this.onMouseOver(event));
-    this.dom.rightDiv.on("mouseleave", (event) => this.onMouseOut(event));
-    this.dom.rightDiv.on("mouseout", (event) => this.onMouseOut(event));
-    document.addEventListener("scroll", () => this?.tip?.hide());
-    const restartDiv = iconsDiv.append("div").style("padding-bottom", "8px");
-    icons["restart"](restartDiv, {
-      title: "Clear filters",
-      handler: async () => {
-        this.clearFiltersExcept([]);
-        this.app.dispatch({
-          type: "plot_edit",
-          id: this.id,
-          config: { filter: this.getFilter(), settings: { [this.type]: this.settings } }
-        });
-      }
-    });
-    if (!config.parentId) {
-      const iconDiv = iconsDiv.append("div").style("fill", "#aaa").style("padding", "2px");
-      icons["add"](iconDiv, {
-        title: "Open another plot for comparison",
-        handler: () => {
-          const show = !this.isComparison;
-          const icon = iconDiv.select("svg");
-          icon.style("fill", show ? "orange" : "black");
-          if (this.isComparison) {
-            const id = this.state.plots.find((p) => p.parentId === this.id)?.id;
-            this.app.dispatch({
-              type: "plot_delete",
-              id,
-              parentId: this.id
-            });
-            return;
-          }
-          this.legendG.selectAll("*").remove();
-          const config2 = structuredClone(this.config);
-          config2.parentId = this.id;
-          this.app.dispatch({
-            type: "plot_create",
-            config: config2
-          });
-        }
-      });
-    }
-  }
-  //tooltip handler to hide the tooltip when mouse leaves the plot area
-  onMouseOut(_event) {
-    this.tip.hide();
-  }
-  async main() {
-    this.config = JSON.parse(JSON.stringify(this.state.config));
-    this.settings = this.config.settings[this.type];
-    this.dom.plotDiv.selectAll("*").remove();
-    this.isComparison = this.config.parentId || this.state.plots.length > 0;
-    for (const config of this.state.plots) {
-      const plot = structuredClone(config);
-      if (this.components.plots[plot.id]) continue;
-      const holder = this.opts.holder.append("div").style("display", "inline-block").style("padding", "5px");
-      plot.holder = holder.append("div");
-      plot.app = this.app;
-      const { componentInit } = await importPlot(plot.chartType);
-      this.components.plots[plot.id] = await componentInit(plot);
-    }
-    for (const plotId in this.components.plots) {
-      if (!this.state.plots.find((p) => p.id === plotId)) {
-        this.components.plots[plotId].destroy();
-        delete this.components.plots[plotId];
-      }
-    }
-  }
-  async setControls(additionalInputs = []) {
-    try {
-      const isRadarFacility = this.isRadarFacility;
-      const filters = {};
-      for (const tw of this.config.filterTWs) {
-        filters[tw.term.id] = getCategoricalTermFilter(this.config.filterTWs, this.settings, tw);
-      }
-      this.filteredTermValues = await this.app.vocabApi.filterTermValues({
-        terms: this.config.filterTWs,
-        filter: this.state.termfilter.filter,
-        filters,
-        facilityTW: this.config.facilityTW,
-        // safe to pass because the backend code will still compare terms[] with the the dataset's hiddenTermIds,
-        // it only affects what will be included in the aggregation and does not disable user access authentication
-        filterByUserSites: this.settings.filterByUserSites,
-        showAll: true
-      });
-      const regions = this.filteredTermValues[this.config.regionTW.id];
-      const countries = this.filteredTermValues[this.config.countryTW.id];
-      const incomes = this.filteredTermValues[this.config.incomeTW.id];
-      const teachingStates = this.filteredTermValues[this.config.teachingStatusTW.id];
-      const referralStates = this.filteredTermValues[this.config.referralStatusTW.id];
-      const fundingSources = this.filteredTermValues[this.config.fundingSourceTW.id];
-      const hospitalVolumes = this.filteredTermValues[this.config.hospitalVolumeTW.id];
-      const yearsOfImplementation = this.filteredTermValues[this.config.yearOfImplementationTW.id];
-      incomes.sort((elem1, elem2) => {
-        const i1 = orderedIncomes.indexOf(elem1.value);
-        const i2 = orderedIncomes.indexOf(elem2.value);
-        if (i1 < i2) return -1;
-        return 1;
-      });
-      hospitalVolumes.sort((elem1, elem2) => {
-        const i1 = orderedVolumes.indexOf(elem1.value);
-        const i2 = orderedVolumes.indexOf(elem2.value);
-        if (i1 < i2) return -1;
-        return 1;
-      });
-      const types = this.filteredTermValues[this.config.typeTW.id];
-      const isAggregate = this.isAggregate();
-      if (!this.settings[this.config.facilityTW?.term?.id] && this.state.sites?.length == 1 && !isAggregate) {
-        this.settings[this.config.facilityTW?.term?.id] = [this.state.sites[0]];
-      }
-      this.filter = this.config.filter || this.getFilter();
-      if (this.type == "profileForms")
-        this.data = await this.app.vocabApi.getProfileFormScores({
-          scoreTerms: this.scoreTerms,
-          scScoreTerms: this.scScoreTerms,
-          filter: this.filter,
-          facilityTW: this.config.facilityTW,
-          filterByUserSites: this.settings.filterByUserSites
-        });
-      else if (this.type != "profilePolar2")
-        this.data = await this.app.vocabApi.getProfileScores({
-          scoreTerms: this.scoreTerms,
-          filter: this.filter,
-          facilityTW: this.config.facilityTW,
-          filterByUserSites: this.settings.filterByUserSites
-        });
-      if (this.data && "error" in this.data) throw this.data.error;
-      this.sites = this.filteredTermValues[this.config.facilityTW.id]?.filter((s) => !s.disabled && s.value);
-      if (this.settings[this.config.facilityTW?.term?.id])
-        for (const site of this.settings[this.config.facilityTW?.term?.id]) {
-          const siteOption = this.sites.find((s) => s.value == site);
-          if (siteOption) siteOption.selected = true;
-        }
-      const chartType = this.type;
-      this.dom.controlsDiv.selectAll("*").remove();
-      const inputs = [];
-      const userSitesFilterInput = {
-        label: "Use accessible sites only",
-        boxLabel: "",
-        type: "checkbox",
-        chartType,
-        settingsKey: "filterByUserSites"
-      };
-      if (this.state.sites?.length == 1 && !isRadarFacility) {
-        const dataInput = {
-          label: "Data",
-          type: "radio",
-          chartType,
-          settingsKey: "isAggregate",
-          styles: { display: "inline-block" },
-          options: [
-            { label: this.state.site, value: false },
-            { label: "Aggregate", value: true }
-          ],
-          callback: (isAggregate2) => {
-            this.settings.isAggregate = isAggregate2;
-            const id = this.sites.find((s) => s.value == this.state.site)?.value;
-            const value = isAggregate2 ? [] : [id];
-            this.setFilterValue(this.config.facilityTW.term.id, value);
-          }
-        };
-        inputs.push(dataInput);
-      }
-      if (isAggregate || isRadarFacility) {
-        inputs.push(
-          ...[
-            {
-              label: "Region",
-              type: "dropdown",
-              chartType,
-              settingsKey: this.config.regionTW.term.id,
-              options: regions,
-              callback: (value) => this.setFilterValue(this.config.regionTW.term.id, value)
-            },
-            {
-              label: "Country",
-              type: "dropdown",
-              chartType,
-              settingsKey: this.config.countryTW.term.id,
-              options: countries,
-              callback: (value) => this.setFilterValue(this.config.countryTW.term.id, value)
-            },
-            {
-              label: "Income group",
-              type: "dropdown",
-              chartType,
-              settingsKey: this.config.incomeTW.term.id,
-              options: incomes,
-              callback: (value) => this.setFilterValue(this.config.incomeTW.term.id, value)
-            },
-            {
-              label: "Facility type",
-              type: "dropdown",
-              chartType,
-              settingsKey: this.config.typeTW.term.id,
-              options: types,
-              callback: (value) => this.setFilterValue(this.config.typeTW.term.id, value)
-            },
-            {
-              label: this.config.teachingStatusTW.term.name,
-              type: "dropdown",
-              chartType,
-              settingsKey: this.config.teachingStatusTW.term.id,
-              options: teachingStates,
-              callback: (value) => this.setFilterValue(this.config.teachingStatusTW.term.id, value)
-            },
-            {
-              label: this.config.referralStatusTW.term.name,
-              type: "dropdown",
-              chartType,
-              settingsKey: this.config.referralStatusTW.term.id,
-              options: referralStates,
-              callback: (value) => this.setFilterValue(this.config.referralStatusTW.term.id, value)
-            },
-            {
-              label: this.config.fundingSourceTW.term.name,
-              type: "dropdown",
-              chartType,
-              settingsKey: this.config.fundingSourceTW.term.id,
-              options: fundingSources,
-              callback: (value) => this.setFilterValue(this.config.fundingSourceTW.term.id, value)
-            },
-            {
-              label: this.config.hospitalVolumeTW.term.name,
-              type: "dropdown",
-              chartType,
-              settingsKey: this.config.hospitalVolumeTW.term.id,
-              options: hospitalVolumes,
-              callback: (value) => this.setFilterValue(this.config.hospitalVolumeTW.term.id, value)
-            },
-            {
-              label: this.config.yearOfImplementationTW.term.name,
-              type: "dropdown",
-              chartType,
-              settingsKey: this.config.yearOfImplementationTW.term.id,
-              options: yearsOfImplementation,
-              callback: (value) => this.setFilterValue(this.config.yearOfImplementationTW.term.id, value)
-            }
-          ]
-        );
-      }
-      if (this.state.logged) {
-        if (isAggregate && this.sites.length > 1) {
-          const sitesInput = {
-            label: "Sites",
-            type: "dropdown",
-            chartType,
-            options: this.sites,
-            multiple: true,
-            callback: (values) => this.setFilterValue(this.config.facilityTW.term.id, values)
-          };
-          inputs.push(sitesInput);
-          if (this.state.user != "admin") inputs.unshift(userSitesFilterInput);
-        }
-        if (isRadarFacility) {
-          const settings = { ...this.settings };
-          settings[this.config.facilityTW.term.id] = null;
-          const filter = this.getFilterWithSettings(settings);
-          this.sampleData = await this.app.vocabApi.getProfileScores({
-            scoreTerms: this.scoreTerms,
-            filter,
-            //filter excluding facility term
-            facilitySite: this.settings.facilitySite || null,
-            //need to pass null not undefined, so the parameter is always passed to the server
-            facilityTW: this.config.facilityTW
-          });
-          const facilitySites = this.sampleData.sites;
-          const facilitySite = this.settings.facilitySite ? facilitySites.find((s) => s.value == this.settings.facilitySite) : facilitySites[0];
-          if (!facilitySite)
-            throw new Error(`Access to ${this.settings.facilitySite} facility not allowed`);
-          facilitySite.selected = true;
-          inputs.unshift({
-            label: "Facility site",
-            type: "dropdown",
-            chartType,
-            options: facilitySites,
-            callback: (value) => {
-              this.setFacilitySite(value);
-            }
-          });
-        }
-      }
-      inputs.unshift(...additionalInputs);
-      this.components.controls = await controlsInit({
-        app: this.app,
-        id: this.id,
-        holder: this.dom.controlsDiv,
-        inputs,
-        title: "Filters"
-      });
-      this.components.controls.on(`downloadClick.${chartType}`, (event) => this.download(event));
-      this.components.controls.on(`helpClick.${chartType}`, () => {
-        const activeCohort = this.state.activeCohort;
-        let link;
-        if (activeCohort == ABBREV_COHORT) {
-          if (chartType == "profileBarchart")
-            link = "https://global.stjude.org/content/dam/global/en-us/documents/no-index/bar-graph-abbr-profiledash.pdf";
-          else if (chartType == "profilePolar" || chartType == "profilePolar2")
-            link = "https://global.stjude.org/content/dam/global/en-us/documents/no-index/polar-graph-abbr-profiledash.pdf";
-          else if (chartType.startsWith("profileRadar"))
-            link = "https://global.stjude.org/content/dam/global/en-us/documents/no-index/radar-abbr-profiledash.pdf";
-        } else if (activeCohort == FULL_COHORT) {
-          if (chartType == "profileBarchart")
-            link = "https://global.stjude.org/content/dam/global/en-us/documents/no-index/bar-graph-full-profiledash.pdf";
-          else if (chartType == "profilePolar" || chartType == "profilePolar2")
-            link = "https://global.stjude.org/content/dam/global/en-us/documents/no-index/polar-graph-full-profiledash.pdf";
-          else if (chartType.startsWith("profileRadar"))
-            link = "https://global.stjude.org/content/dam/global/en-us/documents/no-index/radar-full-profiledash.pdf";
-        }
-        if (link) window.open(link);
-      });
-      this.filtersCount = 0;
-    } catch (e) {
-      console.log(e);
-      throw e;
-    }
-  }
-  setFilterValue(key, value) {
-    const config = this.config;
-    this.settings[key] = value;
-    config.filter = this.getFilter();
-    this.app.dispatch({ type: "plot_edit", id: this.id, config: this.config });
-  }
-  getFilterWithSettings(settings) {
-    let filter = getCategoricalTermFilter(this.config.filterTWs, settings, null);
-    filter = getCombinedTermFilter(this.state, filter);
-    return filter.filter;
-  }
-  getFilter() {
-    let filter = getCategoricalTermFilter(this.config.filterTWs, this.settings, null);
-    filter = getCombinedTermFilter(this.state, filter);
-    return filter.filter;
-  }
-  clearFiltersExcept(ids) {
-    for (const tw of this.config.filterTWs) if (!ids.includes(tw.term.id)) this.settings[tw.term.id] = "";
-  }
-  setFacilitySite(site) {
-    this.settings.facilitySite = site;
-    this.app.dispatch({ type: "plot_edit", id: this.id, config: this.config });
-  }
-  addFilterLegend() {
-    const hasFilters = this.config.filterTWs.some((tw) => this.settings[tw.term.id]);
-    const title = hasFilters ? "Filters" : "No filter applied";
-    this.filterG.attr("font-size", "0.9em").append("text").attr("text-anchor", "left").style("font-weight", "bold").text(`${title} (n=${this.data.n})`).attr("transform", `translate(0, -5)`);
-    for (const tw of this.config.filterTWs) this.addFilterLegendItem(tw.term.name, this.settings[tw.term.id]);
-  }
-  addFilterLegendItem(filter, value) {
-    if (!value || value?.length === 0) return;
-    this.filtersCount++;
-    const isArray = Array.isArray(value);
-    let text = isArray ? value.join(", ") : value;
-    if (text.length > 40) {
-      text = text.slice(0, 40) + "...";
-    }
-    const itemG = this.filterG.append("g").attr("font-size", "0.95em");
-    const textElem = itemG.append("text").attr("transform", `translate(0, ${this.filtersCount * 22})`).attr("text-anchor", "left");
-    textElem.append("tspan").attr("font-weight", "bold").text(`${filter}: `);
-    textElem.append("tspan").text(text);
-  }
-  addEndUserImpressionNote(uiG) {
-    uiG.attr("font-size", "0.9em");
-    const textElem = uiG.append("text").attr("transform", `translate(0, 115)`);
-    textElem.append("tspan").attr("font-weight", "bold").text("End-user Impression: ");
-    textElem.append("tspan").text("It is provided by the local liaison who completed the assessment ");
-    uiG.append("text").attr("transform", `translate(0, 140)`).text("in consultation with the PHO medical director or directly by the PHO medical director.");
-    uiG.append("text").attr("transform", `translate(0, 165)`).text("The end-user was asked to rate the current status of the domains and subdomains included.");
-  }
-  addPOCNote(uiG) {
-    uiG.attr("font-size", "0.9em");
-    const textElem = uiG.append("text").attr("transform", `translate(0, 115)`);
-    textElem.append("tspan").attr("font-weight", "bold").text("Point of Care (POC) Staff: ");
-    textElem.append("tspan").text("All members of the assessment team, ");
-    uiG.append("text").attr("transform", `translate(0, 140)`).text("excluding the Site Coordinator. POC staff provide subjective information based ");
-    uiG.append("text").attr("transform", `translate(0, 165)`).text("on their experience and perception about service delivery at the PHO facility.");
-  }
-  addLegendItem(category, description, index) {
-    const text = this.legendG.append("text").attr("font-size", "0.9em").attr("transform", `translate(0, ${index * 20})`).attr("text-anchor", "left");
-    text.append("tspan").attr("font-weight", "bold").text(category);
-    text.append("tspan").text(`: ${description}`);
-  }
-  getDownloadFilename() {
-    this.downloadCount++;
-    let filename = `${this.type}${this.downloadCount}`;
-    filename = filename.split(" ").join("_");
-    return filename;
-  }
-  getPercentage(d) {
-    if (!d) return 0;
-    const score = this.data.term2Score[d.score.term.id];
-    return score;
-  }
-  async download(event) {
-    const chartImages = this.getChartImages();
-    const menu = new DownloadMenu(chartImages, this.getDownloadFilename());
-    menu.show(event.clientX, event.clientY, event.target);
-  }
-  preApiFreeze(api) {
-    api.download = this.download;
-    api.getChartImages = () => this.getChartImages();
-  }
-  getChartImages() {
-    const plots = Object.values(this.components.plots);
-    const note = "\xA9 2025 St. Jude Children\u2019s Research Hospital";
-    let name = plots.length > 0 ? "Original" : "";
-    name += ` ${note}`;
-    const charts = [{ name, svg: this.dom.svg }];
-    let i = 1;
-    for (const plot of plots) {
-      const chartImages = plot.getChartImages();
-      for (const chartImage of chartImages) {
-        const svg = chartImage.svg;
-        const name2 = chartImages.length > 1 ? `Comparison ${i}. ${chartImage.name} ${note}` : `Comparison ${chartImage.name} ${note}`;
-        charts.push({ name: name2, svg });
-      }
-      i++;
-    }
-    return charts;
-  }
-};
-function makeChartBtnMenu(holder, chartsInstance, chartType) {
-  const state = chartsInstance.state;
-  const key = state.activeCohort == FULL_COHORT ? "full" : "abbrev";
-  const typeConfig = state.termdbConfig?.plotConfigByCohort[key][chartType];
-  if (typeConfig.options.length == 1) {
-    createPlot(typeConfig.options[0], chartType, chartsInstance);
-    return;
-  }
-  const menuDiv = holder.append("div");
-  for (const plotConfig of typeConfig.options) {
-    menuDiv.append("div").attr("class", "sja_menuoption sja_sharp_border").text(plotConfig.title).on("click", () => {
-      createPlot(plotConfig, chartType, chartsInstance);
-      chartsInstance.dom.tip.hide();
-    });
-  }
-  function createPlot(plotConfig, chartType2, chartsInstance2) {
-    const config = structuredClone(plotConfig);
-    config.chartType = chartType2;
-    chartsInstance2.app.dispatch({
-      type: "plot_create",
-      chartType: chartType2,
-      config
-    });
-  }
-}
-async function getProfilePlotConfig(activeCohort, app, opts) {
-  const key = activeCohort == FULL_COHORT ? "full" : "abbrev";
-  const config = app.vocabApi.termdbConfig?.plotConfigByCohort[key]?.[opts.chartType];
-  if (!config) throw `No data available for the plot ${opts.chartType} in this dataset`;
-  const cohortPreffix = activeCohort == FULL_COHORT ? "F" : "A";
-  config.facilityTW = { id: cohortPreffix + "UNIT" };
-  config.hidePlotFilter = true;
-  await fillTermWrapper(config.facilityTW, app.vocabApi);
-  await loadFilterTerms(config, activeCohort, app);
-  return structuredClone(config);
-}
-async function loadFilterTerms(config, activeCohort, app) {
-  const cohortPreffix = activeCohort == FULL_COHORT ? "F" : "A";
-  config.countryTW = { id: cohortPreffix + "country" };
-  config.regionTW = { id: cohortPreffix + "WHO_region" };
-  config.incomeTW = { id: cohortPreffix + "Income_group" };
-  config.typeTW = { id: cohortPreffix + "FC_TypeofFacility" };
-  config.teachingStatusTW = { id: cohortPreffix + "FC_TeachingFacility" };
-  config.referralStatusTW = { id: cohortPreffix + "FC_ReferralFacility" };
-  config.fundingSourceTW = { id: cohortPreffix + "FC_FundingSrc" };
-  config.hospitalVolumeTW = { id: cohortPreffix + "PO_HospitalVolume" };
-  config.yearOfImplementationTW = { id: cohortPreffix + "Year_implementation" };
-  const filterTWs = [
-    config.facilityTW,
-    config.countryTW,
-    config.regionTW,
-    config.incomeTW,
-    config.typeTW,
-    config.teachingStatusTW,
-    config.referralStatusTW,
-    config.fundingSourceTW,
-    config.hospitalVolumeTW,
-    config.yearOfImplementationTW
-  ];
-  await fillTwLst(filterTWs, app.vocabApi);
-  config.filterTWs = filterTWs;
-}
-function clearLocalFilters(plot) {
-  plot.settings = getDefaultProfilePlotSettings();
-}
-function getDefaultProfilePlotSettings() {
-  return {
-    isAggregate: false,
-    filterByUserSites: false
-    //if true, the aggregation will be limited to the user sites only
-  };
-}
-function getProfileLogin(app, cohort = FULL_COHORT) {
-  const auth = app.vocabApi.getClientAuthResult();
-  if (!auth) return { logged: false, sites: [], user: "public" };
-  const auth_info = cohort == FULL_COHORT ? auth.full : auth.abbrev;
-  const logged = auth_info?.role != "public";
-  if (!auth_info) return { logged: false, sites: [], user: "public" };
-  const user = auth_info?.role || "public";
-  const sites = user == "admin" ? null : auth_info.sites;
-  return { logged, sites, user };
-}
-
-export {
-  ABBREV_COHORT,
-  FULL_COHORT,
-  profilePlot,
-  makeChartBtnMenu,
-  getProfilePlotConfig,
-  loadFilterTerms,
-  clearLocalFilters,
-  getDefaultProfilePlotSettings,
-  getProfileLogin
-};
-//# sourceMappingURL=chunk-A742TQD2.js.map

package/dist/chunk-A7E3JZ5P.js

@@ -1,56 +0,0 @@
-import {
-  sayerror
-} from "./chunk-OXJ2TWDO.js";
-import {
-  TermTypeGroups
-} from "./chunk-XYFDBYOY.js";
-
-// termdb/handlers/singleCellCellType.ts
-var SearchHandler = class {
-  async init(opts) {
-    this.validateOpts(opts);
-    this.callback = opts.callback;
-    this.app = opts.app;
-    const holder = opts.holder.append("div").style("padding", "10px 0px");
-    const scctTerms = opts.app.vocabApi.termdbConfig?.termType2terms?.[TermTypeGroups.SINGLECELL_CELLTYPE];
-    if (!scctTerms) {
-      sayerror(
-        holder,
-        `termType2terms[${TermTypeGroups.SINGLECELL_CELLTYPE}]:[] is required in termdbConfig for singleCellCellType handler`
-      );
-      return;
-    }
-    const usecaseConfig = opts.usecase?.specialCase?.config;
-    const plotName = usecaseConfig?.name;
-    let filteredTerms = [];
-    if (plotName) {
-      filteredTerms = scctTerms.filter((t) => t.plot == plotName);
-    } else {
-      filteredTerms = scctTerms.map((t) => Object.assign(t, { label: `${t.name} (${t.plot})` }));
-    }
-    for (const t of filteredTerms) {
-      holder.append("div").classed("termdiv", true).style("padding", "0px 5px").append("div").classed("termlabel sja_filter_tag_btn sja_tree_click_term ts_pill", true).style("display", "inline-block").style("padding", "5px 8px").style("margin", "1px 0px").style("border-radius", "6px").text(t.label || t.name).on("click", () => {
-        const term = this.makeTerm(t, usecaseConfig);
-        this.callback(term);
-      });
-    }
-  }
-  makeTerm(_term, usecaseConfig) {
-    const term = { ..._term };
-    if (!term.sample && usecaseConfig?.sample) term.sample = usecaseConfig.sample;
-    return term;
-  }
-  validateOpts(opts) {
-    if (opts.callback == null) throw new Error("callback is required");
-    if (opts.app == null) throw new Error("app is required");
-    if (opts.holder == null) throw new Error("holder is required");
-    if (opts.usecase == null) throw new Error("usecase is required");
-    if (!opts.app.vocabApi.termdbConfig?.termType2terms)
-      throw new Error("termType2terms is required in termdbConfig for singleCellCellType handler");
-  }
-};
-
-export {
-  SearchHandler
-};
-//# sourceMappingURL=chunk-A7E3JZ5P.js.map