@sjcrh/proteinpaint-client 2.181.0 → 2.183.0

package/dist/RunChart2-ASGCKKER.js.map

@@ -0,0 +1,7 @@
+{
+  "version": 3,
+  "sources": ["../plots/runChart2/defaults.ts", "../plots/runChart2/RunChart2Controls.ts", "../plots/runChart2/model/RunChart2Model.ts", "../plots/runChart2/viewModel/ViewModel.ts", "../plots/runChart2/Settings.ts", "../plots/runChart2/view/SeriesRender.ts", "../plots/runChart2/view/View.ts", "../plots/runChart2/RunChart2.ts"],
+  "sourcesContent": ["import type { RunChart2Settings } from './Settings.ts'\n\nexport function getDefaultRunChart2Settings(overrides = {}): RunChart2Settings {\n\tconst defaults = {\n\t\taggregation: 'median' as const,\n\t\tshowCumulativeFrequency: true,\n\t\tsvgw: 1000,\n\t\tsvgh: 500,\n\t\tcolor: '#ce768e',\n\t\topacity: 0.6,\n\t\tminXScale: null,\n\t\tmaxXScale: null,\n\t\tminYScale: null,\n\t\tmaxYScale: null\n\t}\n\n\treturn Object.assign(defaults, overrides)\n}\n", "import { term0_term2_defaultQ } from '../controls'\nimport type { AppApi } from '#rx'\nimport { roundValueAuto } from '#shared/roundValue.js'\n\n/** Builds X/Y min-max control inputs from data range. Uses fallback 0\u20131 when range is invalid. */\nexport function getMinMaxInputs(\n\trange: { xMin: number; xMax: number; yMin: number; yMax: number },\n\trunChart2?: { dom: { controls: any } }\n) {\n\tconst fallback = { xMin: 0, xMax: 1, yMin: 0, yMax: 1 }\n\tconst valid =\n\t\t[range.xMin, range.xMax, range.yMin, range.yMax].every(n => Number.isFinite(n)) &&\n\t\trange.xMin < range.xMax &&\n\t\trange.yMin < range.yMax\n\tconst r = valid ? range : fallback\n\tconst xMin = roundValueAuto(r.xMin)\n\tconst xMax = roundValueAuto(r.xMax)\n\tconst xStep = (xMax - xMin) / 10 || 0.1\n\tconst yMin = roundValueAuto(r.yMin)\n\tconst yMax = roundValueAuto(r.yMax)\n\tconst yStep = (yMax - yMin) / 10 || 0.1\n\n\treturn [\n\t\t{\n\t\t\tlabel: 'X axis minimum',\n\t\t\ttype: 'number',\n\t\t\tchartType: 'runChart2',\n\t\t\tsettingsKey: 'minXScale',\n\t\t\ttitle: `Set the minimum X axis value between ${xMin} and ${xMax}`,\n\t\t\tplaceholder: `${xMin}`,\n\t\t\tmin: xMin,\n\t\t\tmax: xMax,\n\t\t\tstep: xStep\n\t\t},\n\t\t{\n\t\t\tlabel: 'X axis maximum',\n\t\t\ttype: 'number',\n\t\t\tchartType: 'runChart2',\n\t\t\tsettingsKey: 'maxXScale',\n\t\t\ttitle: `Set the maximum X axis value between ${xMin} and ${xMax}`,\n\t\t\tplaceholder: `${xMax}`,\n\t\t\tmin: xMin,\n\t\t\tmax: xMax,\n\t\t\tstep: xStep,\n\t\t\t...(runChart2 && {\n\t\t\t\tprocessInput: (value: number) => {\n\t\t\t\t\t/** When the user deletes a value, setNumberInput() in controls.config.js sets it to input.min. Instead, reset to default to allow the user to delete the value. */\n\t\t\t\t\tconst sel = runChart2.dom.controls.selectAll('input').filter(function (this: HTMLInputElement) {\n\t\t\t\t\t\treturn this.placeholder === `${xMax}`\n\t\t\t\t\t})\n\t\t\t\t\tif (!sel.node()?.value) return xMax\n\t\t\t\t\treturn value\n\t\t\t\t}\n\t\t\t})\n\t\t},\n\t\t{\n\t\t\tlabel: 'Y axis minimum',\n\t\t\ttype: 'number',\n\t\t\tchartType: 'runChart2',\n\t\t\tsettingsKey: 'minYScale',\n\t\t\ttitle: `Set the minimum Y axis value between ${yMin} and ${yMax}`,\n\t\t\tplaceholder: `${yMin}`,\n\t\t\tmin: yMin,\n\t\t\tmax: yMax,\n\t\t\tstep: yStep\n\t\t},\n\t\t{\n\t\t\tlabel: 'Y axis maximum',\n\t\t\ttype: 'number',\n\t\t\tchartType: 'runChart2',\n\t\t\tsettingsKey: 'maxYScale',\n\t\t\ttitle: `Set the maximum Y axis value between ${yMin} and ${yMax}`,\n\t\t\tplaceholder: `${yMax}`,\n\t\t\tmin: yMin,\n\t\t\tmax: yMax,\n\t\t\tstep: yStep,\n\t\t\t...(runChart2 && {\n\t\t\t\tprocessInput: (value: number) => {\n\t\t\t\t\t/** When the user deletes a value, setNumberInput() in controls.config.js sets it to input.min. Instead, reset to default to allow the user to delete the value. */\n\t\t\t\t\tconst sel = runChart2.dom.controls.selectAll('input').filter(function (this: HTMLInputElement) {\n\t\t\t\t\t\treturn this.placeholder === `${yMax}`\n\t\t\t\t\t})\n\t\t\t\t\tif (!sel.node()?.value) return yMax\n\t\t\t\t\treturn value\n\t\t\t\t}\n\t\t\t})\n\t\t}\n\t]\n}\n\nfunction getBaseInputs(app: AppApi) {\n\treturn [\n\t\t{\n\t\t\ttype: 'term',\n\t\t\tconfigKey: 'xtw',\n\t\t\tchartType: 'runChart2',\n\t\t\tusecase: { target: 'runChart2', detail: 'numeric' },\n\t\t\tlabel: 'X',\n\t\t\tvocabApi: app.vocabApi,\n\t\t\tmenuOptions: 'edit',\n\t\t\tnumericEditMenuVersion: ['continuous', 'discrete']\n\t\t},\n\t\t{\n\t\t\ttype: 'term',\n\t\t\tconfigKey: 'ytw',\n\t\t\tchartType: 'runChart2',\n\t\t\tusecase: { target: 'runChart2', detail: 'numeric' },\n\t\t\tlabel: 'Y',\n\t\t\tvocabApi: app.vocabApi,\n\t\t\tmenuOptions: '{replace,remove}',\n\t\t\tdefaultQ4fillTW: term0_term2_defaultQ,\n\t\t\tnumericEditMenuVersion: ['continuous']\n\t\t},\n\t\t{\n\t\t\tlabel: 'Aggregation',\n\t\t\ttype: 'dropdown',\n\t\t\tchartType: 'runChart2',\n\t\t\tsettingsKey: 'aggregation',\n\t\t\toptions: [{ label: 'Median', value: 'median' }],\n\t\t\tgetDisplayStyle: (plot: any) => (plot?.ytw != null ? 'table-row' : 'none')\n\t\t},\n\t\t{\n\t\t\tlabel: 'Show cumulative frequency',\n\t\t\tboxLabel: '',\n\t\t\ttype: 'checkbox',\n\t\t\tchartType: 'runChart2',\n\t\t\tsettingsKey: 'showCumulativeFrequency',\n\t\t\ttitle: 'Show the cumulative number of events over time',\n\t\t\tgetDisplayStyle: (plot: any) => (plot?.ytw == null ? 'table-row' : 'none')\n\t\t},\n\t\t{\n\t\t\tlabel: 'Plot height',\n\t\t\ttitle: 'Set the plot height in pixels, >=200',\n\t\t\ttype: 'number',\n\t\t\tchartType: 'runChart2',\n\t\t\tsettingsKey: 'svgh',\n\t\t\tdebounceInterval: 500,\n\t\t\tmin: 200,\n\t\t\tstep: 25\n\t\t},\n\t\t{\n\t\t\tlabel: 'Plot width',\n\t\t\ttitle: 'Set the plot width in pixels, >=200',\n\t\t\ttype: 'number',\n\t\t\tchartType: 'runChart2',\n\t\t\tsettingsKey: 'svgw',\n\t\t\tdebounceInterval: 500,\n\t\t\tmin: 200,\n\t\t\tstep: 25\n\t\t},\n\t\t{\n\t\t\tlabel: 'Default color',\n\t\t\ttype: 'color',\n\t\t\tchartType: 'runChart2',\n\t\t\tsettingsKey: 'color'\n\t\t}\n\t]\n}\n\nexport function getRunChart2Controls(\n\tapp: AppApi,\n\trange?: { xMin: number; xMax: number; yMin: number; yMax: number },\n\trunChart2?: { dom: { controls: any }; state?: { config?: any } }\n) {\n\tconst inputs: any[] = getBaseInputs(app)\n\tif (range) {\n\t\tinputs.push(...getMinMaxInputs(range, runChart2))\n\t}\n\treturn inputs\n}\n", "import type { RunChartRequest, RunChartResponse, RunChartErrorResponse, RunChartSuccessResponse } from '#types'\nimport { getNormalRoot } from '#filter'\nimport { dofetch3 } from '#common/dofetch'\n\nexport class RunChart2Model {\n\trunChart2: any\n\tcharts: any[] = []\n\tchartData: RunChartSuccessResponse | null = null\n\n\tconstructor(runChart2: any) {\n\t\tthis.runChart2 = runChart2\n\t}\n\n\tasync fetchData(config: any) {\n\t\tconst result: RunChartResponse = await dofetch3('termdb/runChart', { body: this.getRequestOpts(config) })\n\n\t\tif (!('status' in result) || result.status !== 'ok') {\n\t\t\tthrow new Error(`RunChart2Model.fetchData() failed: ${(result as RunChartErrorResponse).error}`)\n\t\t}\n\n\t\treturn result.series\n\t}\n\n\tgetRequestOpts(config: any): RunChartRequest {\n\t\tconst state = this.runChart2.state\n\t\treturn {\n\t\t\tgenome: state.vocab.genome,\n\t\t\tdslabel: state.vocab.dslabel,\n\t\t\tfilter: getNormalRoot(state.termfilter?.filter),\n\t\t\txtw: config.xtw,\n\t\t\tytw: config.ytw,\n\t\t\taggregation: config.settings?.runChart2?.aggregation,\n\t\t\tshowCumulativeFrequency: config.settings?.runChart2?.showCumulativeFrequency\n\t\t}\n\t}\n}\n", "import type { RunChart2Settings } from '../Settings.ts'\nimport { scaleLinear } from 'd3-scale'\n\nexport class RunChart2ViewModel {\n\t#horizPad = 70\n\t#vertPad = 40\n\t#bottomLabelPad = 72\n\t#leftLabelPad = 50\n\t#xAxisLabelOffset = 50\n\t#yAxisLabelX = 55\n\n\tsettings: RunChart2Settings\n\txMin = Infinity\n\txMax = -Infinity\n\tyMin = Infinity\n\tyMax = -Infinity\n\n\tconstructor(settings: RunChart2Settings) {\n\t\tthis.settings = settings\n\t}\n\n\t/** Increase the domain slightly so all data points fit within the plot. */\n\tsetDomain(min: number, max: number, percent = 0.1): [number, number] {\n\t\tconst rangeInc = (max - min) * percent || 0.1\n\t\treturn [min - rangeInc, max + rangeInc]\n\t}\n\n\tmap(data: any) {\n\t\tlet totalSampleCount = 0\n\t\tfor (const series of data) {\n\t\t\tif (!series.points || series.points.length === 0) continue\n\n\t\t\tfor (const point of series.points) {\n\t\t\t\tthis.xMin = Math.min(point.x, this.xMin)\n\t\t\t\tthis.xMax = Math.max(point.x, this.xMax)\n\t\t\t\tthis.yMin = Math.min(point.y, this.yMin)\n\t\t\t\tthis.yMax = Math.max(point.y, this.yMax)\n\t\t\t\ttotalSampleCount += point.sampleCount ?? 0\n\t\t\t}\n\t\t}\n\n\t\tconst hasValidRange =\n\t\t\tNumber.isFinite(this.xMin) &&\n\t\t\tNumber.isFinite(this.xMax) &&\n\t\t\tthis.xMin < this.xMax &&\n\t\t\tNumber.isFinite(this.yMin) &&\n\t\t\tNumber.isFinite(this.yMax) &&\n\t\t\tthis.yMin < this.yMax\n\n\t\tlet xMinForDomain: number, xMaxForDomain: number, yMinForDomain: number, yMaxForDomain: number\n\t\tif (hasValidRange) {\n\t\t\tconst usePaddingX = this.settings.minXScale == null && this.settings.maxXScale == null\n\t\t\tconst xPadded = usePaddingX ? this.setDomain(this.xMin, this.xMax, 0.02) : null\n\t\t\txMinForDomain = this.settings.minXScale ?? (xPadded ? xPadded[0] : this.xMin)\n\t\t\txMaxForDomain = this.settings.maxXScale ?? (xPadded ? xPadded[1] : this.xMax)\n\n\t\t\tconst usePaddingY = this.settings.minYScale == null && this.settings.maxYScale == null\n\t\t\tconst yPadded = usePaddingY ? this.setDomain(this.yMin, this.yMax, 0.1) : null\n\t\t\tyMinForDomain = this.settings.minYScale ?? (yPadded ? yPadded[0] : this.yMin)\n\t\t\tyMaxForDomain = this.settings.maxYScale ?? (yPadded ? yPadded[1] : this.yMax)\n\t\t} else {\n\t\t\txMinForDomain = 0\n\t\t\txMaxForDomain = 1\n\t\t\tyMinForDomain = 0\n\t\t\tyMaxForDomain = 1\n\t\t}\n\n\t\treturn {\n\t\t\tseries: data,\n\t\t\ttotalSampleCount: totalSampleCount > 0 ? totalSampleCount : undefined,\n\t\t\tplotDims: this.getPlotDimensions({\n\t\t\t\txMin: xMinForDomain,\n\t\t\t\txMax: xMaxForDomain,\n\t\t\t\tyMin: yMinForDomain,\n\t\t\t\tyMax: yMaxForDomain\n\t\t\t})\n\t\t}\n\t}\n\n\tgetPlotDimensions(domains: { xMin: number; xMax: number; yMin: number; yMax: number }) {\n\t\tconst { xMin, xMax, yMin, yMax } = domains\n\t\treturn {\n\t\t\tsvg: {\n\t\t\t\theight: this.settings.svgh + this.#vertPad + this.#bottomLabelPad,\n\t\t\t\twidth: this.settings.svgw + this.#horizPad + this.#leftLabelPad\n\t\t\t},\n\t\t\txAxis: {\n\t\t\t\tscale: scaleLinear().domain([xMin, xMax]).range([0, this.settings.svgw]),\n\t\t\t\tx: this.#horizPad + this.#leftLabelPad,\n\t\t\t\ty: this.settings.svgh + this.#vertPad,\n\t\t\t\tlabelOffset: this.#xAxisLabelOffset\n\t\t\t},\n\t\t\tyAxis: {\n\t\t\t\t// range [svgh, 0]: y grows bottom-to-top\n\t\t\t\tscale: scaleLinear().domain([yMin, yMax]).range([this.settings.svgh, 0]),\n\t\t\t\tx: this.#horizPad + this.#leftLabelPad,\n\t\t\t\ty: this.#vertPad,\n\t\t\t\tlabelX: this.#yAxisLabelX\n\t\t\t}\n\t\t}\n\t}\n}\n", "export type RunChart2Settings = {\n\taggregation: 'median'\n\t/** When true (frequency mode only), Y axis shows cumulative count over time. */\n\tshowCumulativeFrequency?: boolean\n\tsvgw: number\n\tsvgh: number\n\tcolor: string\n\topacity: number\n\tminXScale: null | number\n\tmaxXScale: null | number\n\tminYScale: null | number\n\tmaxYScale: null | number\n}\n\nexport function getFrequencyCountLabel(showCumulative?: boolean): string {\n\treturn showCumulative ? 'Cumulative count' : 'Count'\n}\n", "import { line } from 'd3-shape'\nimport { rgb } from 'd3-color'\nimport { table2col } from '#dom'\nimport { roundValueAuto } from '#shared/roundValue.js'\nimport type { RunChart2Settings } from '../Settings.ts'\nimport { getFrequencyCountLabel } from '../Settings.ts'\nimport type { RunChart2 } from '../RunChart2.ts'\n\nfunction getCoordinate(val: number, min: number | null, max: number | null): number {\n\tif (min != null && val < min) return min\n\tif (max != null && val > max) return max\n\treturn val\n}\n\nfunction isFrequencyMode(config: any): boolean {\n\treturn config?.ytw == null\n}\n\nfunction isCumulativeFrequencyMode(config: any): boolean {\n\treturn isFrequencyMode(config) && config?.settings?.runChart2?.showCumulativeFrequency === true\n}\n\nfunction shouldDrawMedianLine(config: any, series: any): boolean {\n\treturn !isCumulativeFrequencyMode(config) && series?.median != null && !isNaN(series.median)\n}\n\nexport class SeriesRender {\n\tseries: any\n\tplotDims: any\n\tsettings: RunChart2Settings\n\tseriesGroup: any\n\trunChart2: RunChart2 | undefined\n\tseriesColor?: string\n\n\tconstructor(\n\t\tseries: any,\n\t\tplotDims: any,\n\t\tsettings: RunChart2Settings,\n\t\tseriesGroup: any,\n\t\trunChart2?: RunChart2,\n\t\tseriesColor?: string\n\t) {\n\t\tthis.series = series\n\t\tthis.plotDims = plotDims\n\t\tthis.settings = settings\n\t\tthis.seriesGroup = seriesGroup\n\t\tthis.runChart2 = runChart2\n\t\tthis.seriesColor = seriesColor\n\t\tthis.render()\n\t}\n\n\tgetCoordinates(d: { x: number; y: number }): { x: number; y: number } {\n\t\tconst cx = getCoordinate(d.x, this.settings.minXScale, this.settings.maxXScale)\n\t\tconst cy = getCoordinate(d.y, this.settings.minYScale, this.settings.maxYScale)\n\t\treturn {\n\t\t\tx: this.plotDims.xAxis.scale(cx),\n\t\t\ty: this.plotDims.yAxis.scale(cy)\n\t\t}\n\t}\n\n\trender() {\n\t\tif (!this.series.points || this.series.points.length === 0) return\n\n\t\tconst cfg = this.runChart2?.state?.config\n\t\tconst color = this.seriesColor ?? this.settings.color ?? '#1f77b4'\n\t\tconst medianColor = rgb(color).darker(2)\n\t\tconst sortedPoints = [...this.series.points].sort((a, b) => a.x - b.x)\n\n\t\tconst lineBuilder = line<{ x: number; y: number }>()\n\t\t\t.x(d => this.getCoordinates(d).x)\n\t\t\t.y(d => this.getCoordinates(d).y)\n\n\t\tconst opacity = this.settings.opacity ?? 0.6\n\t\tconst seriesG = this.seriesGroup\n\t\t\t.append('g')\n\t\t\t.attr('data-testid', 'sjpp-runChart2-series')\n\t\t\t.attr('data-series-id', this.series.seriesId ?? '')\n\n\t\t// Median line and text FIRST (background layer)\n\t\tif (shouldDrawMedianLine(cfg, this.series)) {\n\t\t\tconst yMedian = this.plotDims.yAxis.scale(\n\t\t\t\tgetCoordinate(this.series.median, this.settings.minYScale, this.settings.maxYScale)\n\t\t\t)\n\t\t\tconst xStart = this.getCoordinates(sortedPoints[0]).x\n\t\t\tconst xEnd = this.getCoordinates(sortedPoints[sortedPoints.length - 1]).x\n\n\t\t\t// Create background group for median line and text\n\t\t\tconst medianG = seriesG.append('g').attr('data-testid', 'sjpp-runChart2-median-bg')\n\n\t\t\t// Draw median horizontal line\n\t\t\tmedianG\n\t\t\t\t.append('line')\n\t\t\t\t.attr('x1', xStart)\n\t\t\t\t.attr('y1', yMedian)\n\t\t\t\t.attr('x2', xEnd)\n\t\t\t\t.attr('y2', yMedian)\n\t\t\t\t.attr('stroke', medianColor.toString())\n\t\t\t\t.attr('stroke-width', 1)\n\t\t\t\t.attr('opacity', 0.5)\n\n\t\t\t// Add median label\n\t\t\tmedianG\n\t\t\t\t.append('text')\n\t\t\t\t.attr('x', xEnd - 10)\n\t\t\t\t.attr('y', yMedian - 5)\n\t\t\t\t.attr('text-anchor', 'end')\n\t\t\t\t.attr('font-size', '12px')\n\t\t\t\t.attr('fill', medianColor.toString())\n\t\t\t\t.attr('pointer-events', 'none')\n\t\t\t\t.text(`M=${roundValueAuto(this.series.median, true, 1)}`)\n\t\t}\n\n\t\t// Curve and dots SECOND (foreground layer)\n\t\tseriesG\n\t\t\t.append('path')\n\t\t\t.datum(sortedPoints)\n\t\t\t.attr('fill', 'none')\n\t\t\t.attr('stroke', color)\n\t\t\t.attr('stroke-width', 1)\n\t\t\t.attr('stroke-linejoin', 'round')\n\t\t\t.attr('opacity', opacity)\n\t\t\t.attr('d', lineBuilder)\n\n\t\tseriesG\n\t\t\t.selectAll('circle')\n\t\t\t.data(sortedPoints)\n\t\t\t.enter()\n\t\t\t.append('circle')\n\t\t\t.attr('cx', d => this.getCoordinates(d).x)\n\t\t\t.attr('cy', d => this.getCoordinates(d).y)\n\t\t\t.attr('r', 2.5)\n\t\t\t.attr('fill', color)\n\t\t\t.attr('stroke', '#fff')\n\t\t\t.attr('stroke-width', 1)\n\t\t\t.style('cursor', 'pointer')\n\t\t\t.on('mouseover', (event: any, d: any) => this.showHoverTip(event, d))\n\t\t\t.on('mouseout', () => this.hideHoverTip())\n\t}\n\n\tshowHoverTip(event: any, d: any) {\n\t\tconst tip = this.runChart2?.dom?.hovertip\n\t\tif (!tip) return\n\t\tconst cfg = this.runChart2?.state?.config\n\t\ttip.clear()\n\t\tconst table = table2col({ holder: tip.d.append('div') })\n\t\tif (this.series.seriesId) table.addRow('Period', this.series.seriesId)\n\t\tconst xTermName = cfg?.xtw?.term?.name ?? 'X'\n\t\ttable.addRow(xTermName, d.xName ?? String(d.x))\n\t\tif (isFrequencyMode(cfg)) {\n\t\t\t// y = plotted value (count or cumulative count).\n\t\t\ttable.addRow(getFrequencyCountLabel(cfg?.settings?.runChart2?.showCumulativeFrequency), String(d.y ?? ''))\n\t\t\tif (d.sampleCount != null && d.sampleCount !== d.y) {\n\t\t\t\ttable.addRow('Sample Count', String(d.sampleCount))\n\t\t\t}\n\t\t} else {\n\t\t\ttable.addRow(cfg?.ytw?.term?.name ?? 'Y', roundValueAuto(d.y, true, 2))\n\t\t\ttable.addRow('Sample Count', String(d.sampleCount ?? ''))\n\t\t}\n\t\ttip.show(event.clientX, event.clientY)\n\t}\n\n\thideHoverTip() {\n\t\tthis.runChart2?.dom?.hovertip?.hide()\n\t}\n\n\t// Click menu disabled until menu options have real actions (currently only close the menu)\n\t// showPointMenu(event: any, point: any) {\n\t// \tif (!this.runChart2 || !this.runChart2.dom.clickMenu) return\n\t// \tthis.hideHoverTip()\n\t// \tconst cfg = this.runChart2.state?.config\n\t// \tconst xTermName = cfg?.term?.term?.name ?? 'X'\n\t// \tconst yTermName = cfg?.term2?.term?.name ?? 'Y'\n\t// \tconst menu = this.runChart2.dom.clickMenu\n\t// \tmenu.clear()\n\t// \tconst menuDiv = menu.d.append('div').attr('class', 'sja_menu_div')\n\t// \tconst options = [\n\t// \t\t{ label: `${xTermName}: ${point.xName ?? point.x}`, callback: () => menu.hide() },\n\t// \t\t{ label: `${yTermName}: ${roundValueAuto(point.y, true, 2)}`, callback: () => menu.hide() },\n\t// \t\t{ label: `Sample Count: ${point.sampleCount}`, callback: () => menu.hide() }\n\t// \t]\n\t// \tmenuDiv\n\t// \t\t.selectAll('div')\n\t// \t\t.data(options)\n\t// \t\t.enter()\n\t// \t\t.append('div')\n\t// \t\t.attr('class', 'sja_menuoption sja_sharp_border')\n\t// \t\t.text(d => d.label)\n\t// \t\t.style('cursor', 'pointer')\n\t// \t\t.on('click', (event: any, d: any) => { d.callback() })\n\t// \tmenu.show(event.clientX, event.clientY)\n\t// }\n}\n", "import { SeriesRender } from './SeriesRender.ts'\nimport type { RunChart2Settings } from '../Settings'\nimport { getFrequencyCountLabel } from '../Settings'\nimport { axisstyle } from '#src/client'\nimport { axisBottom, axisLeft } from 'd3-axis'\nimport { getColors } from '#shared/common.js'\n\nexport class RunChart2View {\n\tviewData: any\n\tsettings: RunChart2Settings\n\tchartDom: any\n\tconfig: any\n\trunChart2: any\n\n\tconstructor(viewData: any, settings: RunChart2Settings, holder: any, config?: any, runChart2?: any) {\n\t\tthis.viewData = viewData\n\t\tthis.settings = settings\n\t\tthis.config = config\n\t\tthis.runChart2 = runChart2\n\t\tconst svg = holder.append('svg').attr('data-testid', 'sjpp-runChart2-svg')\n\t\tthis.chartDom = {\n\t\t\tsvg,\n\t\t\txAxis: svg.append('g').attr('data-testid', 'sjpp-runChart2-xAxis'),\n\t\t\tyAxis: svg.append('g').attr('data-testid', 'sjpp-runChart2-yAxis')\n\t\t}\n\n\t\tthis.render()\n\t}\n\n\trender() {\n\t\tconst plotDims = this.viewData.plotDims\n\n\t\tthis.chartDom.svg.selectAll('*').remove()\n\n\t\tthis.chartDom.xAxis = this.chartDom.svg.append('g').attr('data-testid', 'sjpp-runChart2-xAxis')\n\t\tthis.chartDom.yAxis = this.chartDom.svg.append('g').attr('data-testid', 'sjpp-runChart2-yAxis')\n\n\t\tthis.chartDom.svg.transition().attr('width', plotDims.svg.width).attr('height', plotDims.svg.height)\n\n\t\tthis.renderScale(plotDims.xAxis)\n\t\tthis.renderScale(plotDims.yAxis, true)\n\n\t\tconst seriesGroup = this.chartDom.svg\n\t\t\t.append('g')\n\t\t\t.attr('data-testid', 'sjpp-runChart2-seriesGroup')\n\t\t\t.attr('transform', `translate(${plotDims.xAxis.x}, ${plotDims.yAxis.y})`)\n\n\t\tconst seriesList = this.viewData.series || []\n\t\tconst cat2Color = seriesList.length > 1 ? getColors(seriesList.length) : null\n\t\tfor (let i = 0; i < seriesList.length; i++) {\n\t\t\tconst series = seriesList[i]\n\t\t\tconst seriesColor = cat2Color ? cat2Color(series.seriesId ?? String(i)) : undefined\n\t\t\tnew SeriesRender(series, plotDims, this.settings, seriesGroup, this.runChart2, seriesColor)\n\t\t}\n\n\t\tthis.renderAxisLabels(plotDims)\n\t}\n\n\trenderAxisLabels(plotDims: any) {\n\t\tconst xName = this.config?.xtw?.term?.name || 'X Axis'\n\t\tconst xLabel =\n\t\t\tthis.viewData.totalSampleCount != null && this.config?.xtw?.q?.mode !== 'discrete'\n\t\t\t\t? `${xName}, n=${this.viewData.totalSampleCount.toLocaleString()}`\n\t\t\t\t: xName\n\t\tconst yLabel = this.config?.ytw?.term?.name ?? getFrequencyCountLabel(this.settings?.showCumulativeFrequency)\n\n\t\tconst xAxisLabelY = plotDims.xAxis.y + (plotDims.xAxis.labelOffset ?? 50)\n\t\tthis.chartDom.svg\n\t\t\t.append('text')\n\t\t\t.attr('data-testid', 'sjpp-runChart2-xAxisLabel')\n\t\t\t.attr('transform', `translate(${plotDims.xAxis.x + this.settings.svgw / 2}, ${xAxisLabelY})`)\n\t\t\t.attr('text-anchor', 'middle')\n\t\t\t.style('font-size', '0.9em')\n\t\t\t.text(xLabel)\n\n\t\tconst seriesList = this.viewData.series || []\n\t\tif (seriesList.length > 0 && this.config?.xtw?.q?.mode === 'discrete') {\n\t\t\tconst firstSeries = seriesList[0]\n\t\t\tconst firstSeriesId = firstSeries?.seriesId\n\t\t\tif (firstSeriesId != null) {\n\t\t\t\tconst periodN = firstSeries?.points?.reduce((sum: number, p: any) => sum + (Number(p.sampleCount) || 0), 0) ?? 0\n\t\t\t\tconst labelText =\n\t\t\t\t\tperiodN > 0 ? `${String(firstSeriesId)}, n=${periodN.toLocaleString()}` : String(firstSeriesId)\n\t\t\t\tthis.chartDom.svg\n\t\t\t\t\t.append('text')\n\t\t\t\t\t.attr('data-testid', 'sjpp-runChart2-xAxisSeriesIds')\n\t\t\t\t\t.attr('transform', `translate(${plotDims.xAxis.x + this.settings.svgw / 2}, ${xAxisLabelY + 20})`)\n\t\t\t\t\t.attr('text-anchor', 'middle')\n\t\t\t\t\t.style('font-size', '0.9em')\n\t\t\t\t\t.style('opacity', 1)\n\t\t\t\t\t.text(labelText)\n\t\t\t}\n\t\t}\n\t\tconst yAxisLabelX = plotDims.yAxis.labelX ?? 55\n\t\tthis.chartDom.svg\n\t\t\t.append('text')\n\t\t\t.attr('data-testid', 'sjpp-runChart2-yAxisLabel')\n\t\t\t.attr('transform', `translate(${yAxisLabelX}, ${plotDims.yAxis.y + this.settings.svgh / 2}) rotate(-90)`)\n\t\t\t.attr('text-anchor', 'middle')\n\t\t\t.style('font-size', '0.9em')\n\t\t\t.text(yLabel)\n\t}\n\n\trenderScale(scale: any, isLeft = false) {\n\t\tconst axisGroup = this.chartDom[isLeft ? 'yAxis' : 'xAxis']\n\t\tconst scaleG = axisGroup.append('g').attr('transform', `translate(${scale.x}, ${scale.y})`)\n\n\t\tif (isLeft) {\n\t\t\tscaleG.call(axisLeft(scale.scale))\n\t\t} else {\n\t\t\tconst allPoints: Array<{ x: number; xName: string }> = []\n\t\t\tfor (const series of this.viewData.series || []) {\n\t\t\t\tif (series.points) allPoints.push(...series.points)\n\t\t\t}\n\n\t\t\t// One tick per year: use integer years so ticks are evenly spaced (month in x caused clustering)\n\t\t\tconst yearTickValues = [...new Set(allPoints.map(p => Math.floor(p.x)))].sort((a, b) => a - b)\n\t\t\tconst xAxis = axisBottom(scale.scale).tickFormat(d => String(Math.floor(Number(d))))\n\t\t\tif (yearTickValues.length > 0) xAxis.tickValues(yearTickValues)\n\t\t\telse xAxis.ticks(6)\n\n\t\t\tscaleG.call(xAxis)\n\t\t\tscaleG.selectAll('text').style('text-anchor', 'middle').style('font-size', '12px')\n\t\t}\n\n\t\taxisstyle({\n\t\t\taxis: scaleG,\n\t\t\tcolor: 'black',\n\t\t\tshowline: true\n\t\t})\n\t}\n}\n", "import { PlotBase } from '#plots/PlotBase.ts'\nimport { getCompInit, copyMerge, type RxComponent, type ComponentApi, type AppApi } from '#rx'\nimport { select2Terms, DownloadMenu, Menu } from '#dom'\nimport { fillTermWrapper } from 'termsetting/utils.ts'\nimport { getCombinedTermFilter } from '#filter/filter.utils'\nimport { getDefaultRunChart2Settings } from './defaults.ts'\nimport { getRunChart2Controls } from './RunChart2Controls.ts'\nimport { controlsInit } from '#plots/controls.js'\nimport { RunChart2Model } from './model/RunChart2Model.ts'\nimport { RunChart2ViewModel } from './viewModel/ViewModel.ts'\nimport { RunChart2View } from './view/View.ts'\n\nexport class RunChart2 extends PlotBase implements RxComponent {\n\tstatic type = 'runChart2'\n\ttype: string\n\tcomponents: { controls: ComponentApi }\n\tdom: any\n\tmodel!: RunChart2Model\n\tviewModel!: RunChart2ViewModel\n\tview!: RunChart2View\n\tconfigTermKeys = ['xtw', 'ytw']\n\n\tconstructor(opts: any, api: any) {\n\t\tsuper(opts, api)\n\t\tthis.opts = opts\n\t\tthis.api = api\n\t\tthis.type = RunChart2.type\n\t\tif (this.opts.parentId) this.parentId = this.opts.parentId\n\n\t\tthis.components = {\n\t\t\tcontrols: {} as ComponentApi\n\t\t}\n\t\tconst leftDiv = opts.holder.insert('div').style('display', 'inline-block')\n\t\tconst controlsHolder = leftDiv.append('div').style('display', 'inline-block')\n\t\tconst chartHolder = opts.holder\n\t\t\t.append('div')\n\t\t\t.attr('data-testid', 'sjpp-runChart2-chartHolder')\n\t\t\t.style('display', 'inline-block')\n\t\t\t.style('vertical-align', 'top')\n\n\t\tthis.dom = {\n\t\t\tcontrols: controlsHolder,\n\t\t\tchartHolder,\n\t\t\terror: chartHolder.append('div').attr('data-testid', 'sjpp-runChart2-error'),\n\t\t\thovertip: new Menu({ padding: '3px' })\n\t\t}\n\t\tif (opts.header) {\n\t\t\tthis.dom.headerLabel = opts.header\n\t\t\t\t.append('span')\n\t\t\t\t.attr('class', 'sja_runChart2_header')\n\t\t\t\t.attr('data-testid', 'sjpp-runChart2-header')\n\t\t\t\t.style('font-size', '0.8em')\n\t\t\t\t.style('opacity', 0.7)\n\t\t\t\t.text('RUN CHART')\n\t\t}\n\t}\n\n\treactsTo(action: any) {\n\t\tif (action.type.includes('cache_termq')) return true\n\t\tif (action.type.startsWith('filter')) return true\n\t\tif (action.type.startsWith('cohort')) return true\n\t\tif (action.type == 'app_refresh') return true\n\t\tif (action.type.startsWith('plot_')) {\n\t\t\treturn (\n\t\t\t\t(action.id === this.id || action.id == this.parentId) &&\n\t\t\t\t(!action.config?.childType || action.config?.childType == this.type)\n\t\t\t)\n\t\t}\n\t}\n\n\tgetState(appState: any) {\n\t\tconst config = appState.plots.find(p => p.id === this.id)\n\t\tif (!config) {\n\t\t\tthrow new Error(\n\t\t\t\t`No plot with id='${this.id}' found. Did you set this.id before this.api = getComponentApi(this)?`\n\t\t\t)\n\t\t}\n\t\tconst parentConfig = appState.plots.find(p => p.id === this.parentId)\n\t\tconst termfilter = getCombinedTermFilter(appState, config.filter || parentConfig?.filter)\n\n\t\treturn {\n\t\t\ttermdbConfig: appState.termdbConfig,\n\t\t\ttermfilter,\n\t\t\tvocab: appState.vocab,\n\t\t\tconfig: Object.assign({}, config, {\n\t\t\t\tsettings: {\n\t\t\t\t\trunChart2: config.settings?.runChart2\n\t\t\t\t}\n\t\t\t})\n\t\t}\n\t}\n\n\tasync setControls(viewModel: RunChart2ViewModel) {\n\t\tconst range = { xMin: viewModel.xMin, xMax: viewModel.xMax, yMin: viewModel.yMin, yMax: viewModel.yMax }\n\t\tthis.dom.controls.selectAll('*').remove()\n\t\tthis.components.controls = await controlsInit({\n\t\t\tapp: this.app,\n\t\t\tid: this.id,\n\t\t\tholder: this.dom.controls.style('display', 'inline-block'),\n\t\t\tinputs: getRunChart2Controls(this.app, range, this)\n\t\t})\n\t\tthis.components.controls.on('downloadClick.runChart2', async (event: any) => {\n\t\t\tawait this.download(event)\n\t\t})\n\t\tconst appState = this.app.getState()\n\t\tthis.components.controls.update?.({ appState })\n\t}\n\n\tasync download(event: any) {\n\t\tconst chartImages = this.getChartImages()\n\t\tif (chartImages.length === 0) {\n\t\t\tconsole.warn('No chart images available for download')\n\t\t\treturn\n\t\t}\n\t\tconst filename = this.getDownloadFilename()\n\t\tconst menu = new DownloadMenu(chartImages, filename)\n\t\tmenu.show(event.clientX, event.clientY, event.target)\n\t}\n\n\tgetChartImages() {\n\t\tconst chartImages: any[] = []\n\t\tif (!this.view || !this.view.chartDom) return chartImages\n\n\t\tconst svg = this.view.chartDom.svg\n\t\tif (svg && !svg.empty()) {\n\t\t\tconst chartName = this.state?.config?.xtw?.term?.name || 'runChart2'\n\t\t\tchartImages.push({ name: chartName, svg })\n\t\t}\n\t\treturn chartImages\n\t}\n\n\tgetDownloadFilename() {\n\t\tconst xTermName = this.state?.config?.xtw?.term?.name || 'runChart2'\n\t\tconst yTermName = this.state?.config?.ytw?.term?.name || ''\n\t\treturn yTermName ? `${xTermName}_${yTermName}` : xTermName\n\t}\n\n\tasync main() {\n\t\tconst c = this.state.config\n\t\tif (c.childType != this.type && c.chartType != this.type) return\n\n\t\tconst config = await this.getMutableConfig()\n\n\t\tif (this.dom.headerLabel) {\n\t\t\tthis.dom.headerLabel.text(config.ytw == null ? 'FREQUENCY CHART' : 'RUN CHART')\n\t\t}\n\n\t\ttry {\n\t\t\tthis.model = new RunChart2Model(this)\n\t\t\tconst data = await this.model.fetchData(config)\n\t\t\tif (!data) {\n\t\t\t\tthis.dom.error.text('No data available for the selected terms and filter.')\n\t\t\t}\n\t\t\tconst settings = config.settings.runChart2\n\t\t\tthis.viewModel = new RunChart2ViewModel(settings)\n\t\t\tconst viewData = this.viewModel.map(data)\n\n\t\t\tawait this.setControls(this.viewModel)\n\n\t\t\tif (!this.dom.chartHolder.empty()) {\n\t\t\t\tthis.dom.chartHolder.selectAll('*').remove()\n\t\t\t}\n\t\t\tthis.view = new RunChart2View(viewData, settings, this.dom.chartHolder, config, this)\n\t\t} catch (e) {\n\t\t\tconsole.error(e)\n\t\t\tthrow new Error(`RunChart2.main() failed: ${e}`)\n\t\t}\n\t}\n}\n\nexport const runChart2Init = getCompInit(RunChart2)\nexport const componentInit = runChart2Init\n\nexport async function getPlotConfig(opts: any, app: AppApi) {\n\tconst xtw = opts.xtw\n\tconst ytw = opts.ytw ?? null\n\tif (!xtw) throw new Error('runChart2 requires xtw (X term wrapper)')\n\n\tconst raw = opts.settings || {}\n\tconst settings = {\n\t\t...raw,\n\t\trunChart2: {\n\t\t\t...(raw.runChart2 ?? {}),\n\t\t\t...(raw.frequencyChart?.showCumulativeFrequency !== undefined && {\n\t\t\t\tshowCumulativeFrequency: raw.frequencyChart.showCumulativeFrequency\n\t\t\t})\n\t\t}\n\t}\n\n\ttry {\n\t\tif (!xtw.q) xtw.q = {}\n\t\txtw.q.mode = xtw.q.mode ?? 'continuous'\n\t\tawait fillTermWrapper(xtw, app.vocabApi)\n\t\tif (ytw) {\n\t\t\tif (!ytw.q) ytw.q = {}\n\t\t\tytw.q.mode = ytw.q.mode ?? 'continuous'\n\t\t\tawait fillTermWrapper(ytw, app.vocabApi)\n\t\t}\n\t} catch (e) {\n\t\tconsole.error(e)\n\t\tthrow new Error(`runChart2 getPlotConfig() failed: ${e}`)\n\t}\n\n\tconst defaultConfig =\n\t\tapp.vocabApi.termdbConfig?.plotConfigByCohort?.default?.[opts.chartType] ??\n\t\t(opts.chartType === 'frequencyChart'\n\t\t\t? app.vocabApi.termdbConfig?.plotConfigByCohort?.default?.runChart2\n\t\t\t: undefined)\n\n\tconst config: any = {\n\t\txtw,\n\t\tytw,\n\t\tsettings: {\n\t\t\tcontrols: { isOpen: false },\n\t\t\trunChart2: getDefaultRunChart2Settings({ ...opts, settings })\n\t\t}\n\t}\n\treturn copyMerge(config, defaultConfig, {\n\t\t...opts,\n\t\txtw,\n\t\tytw,\n\t\tsettings: { ...settings, runChart2: settings.runChart2 ?? {} }\n\t})\n}\n\nexport function makeChartBtnMenu(holder, chartsInstance) {\n\tconst menuDiv = holder.append('div')\n\n\tconst callback = (xterm: any, yterm: any) => {\n\t\tchartsInstance.app.dispatch({\n\t\t\ttype: 'plot_create',\n\t\t\tconfig: {\n\t\t\t\tchartType: 'runChart2',\n\t\t\t\txtw: { term: xterm, q: { mode: 'continuous' } },\n\t\t\t\tytw: { term: yterm, q: { mode: 'continuous' } },\n\t\t\t\tname: `${xterm.name} vs ${yterm.name}`\n\t\t\t}\n\t\t})\n\t}\n\n\tmenuDiv\n\t\t.append('button')\n\t\t.style('margin', '5px')\n\t\t.style('padding', '10px 15px')\n\t\t.style('border-radius', '20px')\n\t\t.style('border-color', '#ededed')\n\t\t.style('display', 'block')\n\t\t.text('Select data to plot ...')\n\t\t.on('click', () => {\n\t\t\tchartsInstance.dom.tip.clear()\n\t\t\tselect2Terms(chartsInstance.dom.tip, chartsInstance.app, 'runChart2', 'date', callback, 'numeric')\n\t\t\tchartsInstance.dom.tip.show()\n\t\t})\n\n\tconst byDefault = chartsInstance.state.termdbConfig?.plotConfigByCohort?.default\n\tconst runChart2Plots = byDefault?.runChart2?.plots ?? []\n\tfor (const plot of runChart2Plots) {\n\t\tconst config = structuredClone(plot)\n\t\tconst dispatchPlot = () => {\n\t\t\tchartsInstance.app.dispatch({\n\t\t\t\ttype: 'plot_create',\n\t\t\t\tconfig: {\n\t\t\t\t\tchartType: 'runChart2',\n\t\t\t\t\t...config\n\t\t\t\t}\n\t\t\t})\n\t\t\tchartsInstance.dom.tip.hide()\n\t\t}\n\t\tmenuDiv\n\t\t\t.append('button')\n\t\t\t.attr('class', 'sja_menuoption sja_sharp_border')\n\t\t\t.style('margin', '5px')\n\t\t\t.style('padding', '10px 15px')\n\t\t\t.style('border-radius', '20px')\n\t\t\t.style('border-color', '#ededed')\n\t\t\t.style('display', 'block')\n\t\t\t.text(plot.name)\n\t\t\t.on('mousedown', (event: any) => {\n\t\t\t\tevent.preventDefault()\n\t\t\t\tevent.stopPropagation()\n\t\t\t\tdispatchPlot()\n\t\t\t})\n\t\t\t.on('click', (event: any) => {\n\t\t\t\tevent.preventDefault()\n\t\t\t\tevent.stopPropagation()\n\t\t\t\tchartsInstance.dom.tip.hide()\n\t\t\t})\n\t}\n}\n"],
+  "mappings": 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+}