@rcsb/rcsb-saguaro-app 6.3.7-dev-js-seqcoord.19 → 6.3.7-dev-js-seqcoord.21

package/lib/RcsbFvWeb/RcsbFvBuilder.d.ts

@@ -2,8 +2,8 @@ import { RcsbFvAdditionalConfig, RcsbFvModulePublicInterface, RcsbModuleDataProv
 import { UniprotSequenceConfig } from "./RcsbFvBuilder/RcsbFvUniprotBuilder";
 import { InstanceSequenceConfig, InstanceSequenceOnchangeInterface } from "./RcsbFvBuilder/RcsbFvInstanceBuilder";
 import { PfvBuilderInterface } from "./RcsbFvBuilder/RcsbFvProteinSequenceBuilder";
-import { SearchQuery } from "@rcsb/rcsb-api-tools/build/RcsbSearch/Types/SearchQueryInterface";
-import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/build/RcsbDw/Types/DwEnums";
+import { SearchQuery } from "@rcsb/rcsb-api-tools/lib/RcsbSearch/Types/SearchQueryInterface";
+import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/lib/RcsbDw/Types/DwEnums";
 import { PairwiseAlignmentInterface } from "../RcsbUtils/PairwiseAlignmentTools/PairwiseAlignmentBuilder";
 import { ActionMethods } from "../RcsbFvUI/Helper/ActionMethods";
 export declare function unmount(elementId: string): void;

package/lib/RcsbFvWeb/RcsbFvBuilder.js

@@ -6,7 +6,7 @@ import { RcsbFvEntityBuilder } from "./RcsbFvBuilder/RcsbFvEntityBuilder";
 import { RcsbFvInstanceBuilder } from "./RcsbFvBuilder/RcsbFvInstanceBuilder";
 import { RcsbFvProteinSequenceBuilder } from "./RcsbFvBuilder/RcsbFvProteinSequenceBuilder";
 import { RcsbFvAssemblyBuilder } from "./RcsbFvBuilder/RcsbFvAssemblyBuilder";
-import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/build/RcsbDw/Types/DwEnums";
+import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/lib/RcsbDw/Types/DwEnums";
 import { RcsbFvGroupTabsBuilder } from "./RcsbFvGroup/RcsbFvGroupTabsBuilder";
 import { RcsbFvGroupAlignmentBuilder } from "./RcsbFvBuilder/RcsbFvGroupAlignmentBuilder";
 import { RcsbFvDataProviderBuilder } from "./RcsbFvBuilder/RcsbFvDataProviderBuilder";

package/lib/RcsbFvWeb/RcsbFvBuilder.js.map

@@ -1 +1 @@
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package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/AlignmentBlockFactory.d.ts

@@ -1,4 +1,4 @@
-import { SequenceAlignments, TargetAlignments } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
+import { SequenceAlignments, TargetAlignments } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
 import { RcsbFvRowConfigInterface } from "@rcsb/rcsb-saguaro/lib/RcsbFv/RcsbFvConfig/RcsbFvConfigInterface";
 import { AlignmentRequestContextType } from "../RcsbFvTrackFactory/TrackFactoryImpl/AlignmentTrackFactory";
 import { BlockFactoryInterface } from "./BlockFactoryInterface";

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/AnnotationsBlockFactory.d.ts

@@ -1,4 +1,4 @@
-import { SequenceAnnotations } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
+import { SequenceAnnotations } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
 import { RcsbFvRowConfigInterface } from "@rcsb/rcsb-saguaro/lib/RcsbFv/RcsbFvConfig/RcsbFvConfigInterface";
 import { AnnotationRequestContext } from "../../../RcsbCollectTools/AnnotationCollector/AnnotationCollectorInterface";
 import { BlockFactoryInterface } from "./BlockFactoryInterface";

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockManager/AnnotationBlockManager.d.ts

@@ -1,4 +1,4 @@
-import { SequenceAnnotations } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
+import { SequenceAnnotations } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
 import { RcsbAnnotationConfig } from "../../../../RcsbAnnotationConfig/RcsbAnnotationConfig";
 import { PolymerEntityInstanceTranslate } from "../../../../RcsbUtils/Translators/PolymerEntityInstanceTranslate";
 import { AnnotationRequestContext } from "../../../../RcsbCollectTools/AnnotationCollector/AnnotationCollectorInterface";

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockManager/AnnotationTrackManager.d.ts

@@ -1,5 +1,5 @@
 import { RcsbFvTrackDataElementGapInterface } from "@rcsb/rcsb-saguaro/lib/RcsbDataManager/RcsbDataManager";
-import { FeaturesFeaturePositions } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
+import { FeaturesFeaturePositions } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
 import { PolymerEntityInstanceTranslate } from "../../../../RcsbUtils/Translators/PolymerEntityInstanceTranslate";
 import { RcsbAnnotationConfigInterface } from "../../../../RcsbAnnotationConfig/AnnotationConfigInterface";
 import { TrackManagerFactoryInterface, TrackManagerInterface } from "./TrackManagerInterface";

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockManager/AnnotationTrackManager.js

@@ -1,9 +1,9 @@
-import { AnnotationReference } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
+import { AnnotationReference } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
 import { TrackUtils } from "../../RcsbFvTrackFactory/TrackFactoryImpl/Helper/TrackUtils";
 import { Assertions } from "../../../../RcsbUtils/Helpers/Assertions";
 var assertElementListDefined = Assertions.assertElementListDefined;
 var assertDefined = Assertions.assertDefined;
-import { TagDelimiter } from "@rcsb/rcsb-api-tools/build/RcsbUtils/TagDelimiter";
+import { TagDelimiter } from "@rcsb/rcsb-api-tools/lib/RcsbUtils/TagDelimiter";
 export class AnnotationTrackManagerFactory {
     getTrackManager(trackId, annotationConfig, entityInstanceTranslator) {
         return new AnnotationTrackManager(trackId, annotationConfig, entityInstanceTranslator);

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockManager/AnnotationTrackManager.js.map

@@ -1 +1 @@
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package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockManager/TrackManagerInterface.d.ts

@@ -1,6 +1,6 @@
 import { RcsbFvTrackDataElementInterface } from "@rcsb/rcsb-saguaro/lib/RcsbDataManager/RcsbDataManager";
 import { RcsbAnnotationConfigInterface } from "../../../../RcsbAnnotationConfig/AnnotationConfigInterface";
-import { Features, SequenceReference, AnnotationReference } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
+import { Features, SequenceReference, AnnotationReference } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
 import { AnnotationProcessingInterface } from "../../../../RcsbCollectTools/AnnotationCollector/AnnotationCollectorInterface";
 import { RcsbFvTrackDataAnnotationInterface } from "../../RcsbFvTrackFactory/RcsbFvTrackDataAnnotationInterface";
 export interface TrackManagerFactoryInterface<T extends any[]> {

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/AlignmentTrackFactory.d.ts

@@ -1,6 +1,6 @@
 import { RcsbFvRowConfigInterface } from "@rcsb/rcsb-saguaro/lib/RcsbFv/RcsbFvConfig/RcsbFvConfigInterface";
 import { RcsbFvTrackDataElementInterface } from "@rcsb/rcsb-saguaro/lib/RcsbDataManager/RcsbDataManager";
-import { AlignedRegions, TargetAlignments } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
+import { AlignedRegions, TargetAlignments } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
 import { PolymerEntityInstanceTranslate, AlignmentContextInterface } from "../../../../RcsbUtils/Translators/PolymerEntityInstanceTranslate";
 import { TrackFactoryInterface } from "../TrackFactoryInterface";
 import { AlignmentCollectConfig } from "../../../../RcsbCollectTools/AlignmentCollector/AlignmentCollectorInterface";

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/Helper/TrackUtils.d.ts

@@ -1,4 +1,4 @@
-import { SequenceReference, AnnotationReference } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
+import { SequenceReference, AnnotationReference } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
 export declare namespace TrackUtils {
     function getProvenanceConfigFormTarget(targetId: string, targetSource: SequenceReference | AnnotationReference): {
         name: string;

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/Helper/TrackUtils.js

@@ -1,5 +1,5 @@
 import { RcsbAnnotationConstants } from "../../../../../RcsbAnnotationConfig/RcsbAnnotationConstants";
-import { TagDelimiter } from "@rcsb/rcsb-api-tools/build/RcsbUtils/TagDelimiter";
+import { TagDelimiter } from "@rcsb/rcsb-api-tools/lib/RcsbUtils/TagDelimiter";
 export var TrackUtils;
 (function (TrackUtils) {
     function getProvenanceConfigFormTarget(targetId, targetSource) {

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/Helper/TrackUtils.js.map

@@ -1 +1 @@
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+{"version":3,"file":"TrackUtils.js","sourceRoot":"","sources":["../../../../../../src/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/Helper/TrackUtils.ts"],"names":[],"mappings":"AAAA,OAAO,EAAC,uBAAuB,EAAC,MAAM,6DAA6D,CAAC;AAEpG,OAAO,EAAC,YAAY,EAAC,MAAM,iDAAiD,CAAC;AAE7E,MAAM,KAAW,UAAU,CAiC1B;AAjCD,WAAiB,UAAU;IAEvB,SAAgB,6BAA6B,CAAC,QAAgB,EAAE,YAAmD;QAC/G,IAAG,YAAY,CAAC,QAAQ,CAAC,QAAQ,CAAC;YAC9B,OAAO;gBACH,IAAI,EAAE,uBAAuB,CAAC,cAAc,CAAC,GAAG;gBAChD,KAAK,EAAE,uBAAuB,CAAC,mBAAmB,CAAC,OAAO;aAC7D,CAAA;aACA,IAAG,YAAY,CAAC,OAAO,CAAC,QAAQ,CAAC;YAClC,OAAM;gBACF,IAAI,EAAE,uBAAuB,CAAC,cAAc,CAAC,GAAG;gBAChD,KAAK,EAAE,uBAAuB,CAAC,mBAAmB,CAAC,GAAG;aACzD,CAAA;;YAED,OAAM;gBACF,IAAI,EAAE,YAAY;gBAClB,KAAK,EAAE,uBAAuB,CAAC,mBAAmB,CAAC,QAAQ;aAC9D,CAAA;IACT,CAAC;IAhBe,wCAA6B,gCAgB5C,CAAA;IAED,SAAgB,yBAAyB,CAAC,QAAgB,EAAE,MAA6C;QACrG,IAAG,YAAY,CAAC,OAAO,CAAC,QAAQ,CAAC,IAAI,MAAM,CAAC,QAAQ,CAAC,MAAM,CAAC;YACxD,OAAO,MAAM,CAAC,OAAO,CAAC,MAAM,EAAC,MAAM,CAAC,CAAC;;YAErC,OAAO,MAAM,CAAA;IACrB,CAAC;IALe,oCAAyB,4BAKxC,CAAA;IAED,SAAgB,gCAAgC,CAAC,UAAmB;QAChE,IAAG,UAAU,KAAK,uBAAuB,CAAC,cAAc,CAAC,GAAG,IAAI,UAAU,KAAK,uBAAuB,CAAC,cAAc,CAAC,QAAQ;YAC1H,OAAO,uBAAuB,CAAC,mBAAmB,CAAC,OAAO,CAAC;QAC/D,OAAO,uBAAuB,CAAC,mBAAmB,CAAC,QAAQ,CAAC;IAChE,CAAC;IAJe,2CAAgC,mCAI/C,CAAA;AAEL,CAAC,EAjCgB,UAAU,KAAV,UAAU,QAiC1B"}

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/MsaAlignmentTrackFactory.d.ts

@@ -1,7 +1,7 @@
 import { RcsbFvRowConfigInterface } from "@rcsb/rcsb-saguaro/lib/RcsbFv/RcsbFvConfig/RcsbFvConfigInterface";
 import { TrackFactoryInterface } from "../TrackFactoryInterface";
 import { AlignmentRequestContextType } from "./AlignmentTrackFactory";
-import { SequenceAnnotations, TargetAlignments } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
+import { SequenceAnnotations, TargetAlignments } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
 import { PolymerEntityInstanceTranslate } from "../../../../RcsbUtils/Translators/PolymerEntityInstanceTranslate";
 export declare class MsaAlignmentTrackFactory implements TrackFactoryInterface<[AlignmentRequestContextType, TargetAlignments]> {
     private observedAlignmentTrackFactory;

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/MsaAlignmentTrackFactory.js

@@ -1,7 +1,7 @@
 import { __awaiter } from "tslib";
 import { PositionalScoreAlignmentTrackFactory } from "./PositionalScoreAlignmentTrackFactory";
 import { PlainObservedAlignmentTrackFactory } from "./PlainObservedAlignmentTrackFactory";
-import { TagDelimiter } from "@rcsb/rcsb-api-tools/build/RcsbUtils/TagDelimiter";
+import { TagDelimiter } from "@rcsb/rcsb-api-tools/lib/RcsbUtils/TagDelimiter";
 export class MsaAlignmentTrackFactory {
     constructor(entityInstanceTranslator) {
         this.observedAlignmentTrackFactory = new PlainObservedAlignmentTrackFactory(entityInstanceTranslator);

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/MsaAlignmentTrackFactory.js.map

@@ -1 +1 @@
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+{"version":3,"file":"MsaAlignmentTrackFactory.js","sourceRoot":"","sources":["../../../../../src/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/MsaAlignmentTrackFactory.ts"],"names":[],"mappings":";AAKA,OAAO,EAAC,oCAAoC,EAAC,MAAM,wCAAwC,CAAC;AAE5F,OAAO,EAAC,kCAAkC,EAAC,MAAM,sCAAsC,CAAC;AACxF,OAAO,EAAC,YAAY,EAAC,MAAM,iDAAiD,CAAC;AAE7E,MAAM,OAAO,wBAAwB;IAKjC,YAAY,wBAAyD;QACjE,IAAI,CAAC,6BAA6B,GAAG,IAAI,kCAAkC,CAAC,wBAAwB,CAAC,CAAC;QACtG,IAAI,CAAC,oCAAoC,GAAG,IAAI,oCAAoC,CAAC,wBAAwB,CAAC,CAAC;IACnH,CAAC;IAEY,QAAQ,CAAC,qBAAkD,EAAE,eAAiC;;YACvG,IAAG,eAAe,CAAC,SAAS,IAAI,YAAY,CAAC,oBAAoB,CAAC,eAAe,CAAC,SAAS,CAAC;gBACxF,OAAO,IAAI,CAAC,6BAA6B,CAAC,QAAQ,CAAC,qBAAqB,EAAC,eAAe,CAAC,CAAC;;gBAE1F,OAAO,IAAI,CAAC,oCAAoC,CAAC,QAAQ,CAAC,qBAAqB,EAAC,eAAe,CAAC,CAAC;QACzG,CAAC;KAAA;IAEY,eAAe,CAAC,iBAA6C,EAAE,gBAA4C;;YACpH,MAAM,IAAI,CAAC,6BAA6B,CAAC,eAAe,CAAC,iBAAiB,CAAC,CAAC;YAC5E,MAAM,IAAI,CAAC,oCAAoC,CAAC,eAAe,CAAC,gBAAgB,CAAC,CAAC;QACtF,CAAC;KAAA;CAEJ"}

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/PlainAlignmentTrackFactory.d.ts

@@ -1,6 +1,6 @@
 import { RcsbFvColorGradient, RcsbFvTrackDataElementInterface } from "@rcsb/rcsb-saguaro/lib/RcsbDataManager/RcsbDataManager";
 import { RcsbFvRowConfigInterface } from "@rcsb/rcsb-saguaro/lib/RcsbFv/RcsbFvConfig/RcsbFvConfigInterface";
-import { AlignedRegions, TargetAlignments } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
+import { AlignedRegions, TargetAlignments } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
 import { PolymerEntityInstanceTranslate, AlignmentContextInterface } from "../../../../RcsbUtils/Translators/PolymerEntityInstanceTranslate";
 import { TrackFactoryInterface } from "../TrackFactoryInterface";
 import { AlignmentCollectConfig } from "../../../../RcsbCollectTools/AlignmentCollector/AlignmentCollectorInterface";

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/PlainObservedAlignmentTrackFactory.d.ts

@@ -1,5 +1,5 @@
 import { RcsbFvRowConfigInterface } from "@rcsb/rcsb-saguaro/lib/RcsbFv/RcsbFvConfig/RcsbFvConfigInterface";
-import { SequenceAnnotations, TargetAlignments } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
+import { SequenceAnnotations, TargetAlignments } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
 import { PolymerEntityInstanceTranslate } from "../../../../RcsbUtils/Translators/PolymerEntityInstanceTranslate";
 import { TrackFactoryInterface } from "../TrackFactoryInterface";
 import { AlignmentRequestContextType } from "./AlignmentTrackFactory";

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/PlainObservedAlignmentTrackFactory.js

@@ -6,7 +6,7 @@ import { TrackUtils } from "./Helper/TrackUtils";
 import { rcsbRequestCtxManager } from "../../../../RcsbRequest/RcsbRequestContextManager";
 import { Assertions } from "../../../../RcsbUtils/Helpers/Assertions";
 var assertDefined = Assertions.assertDefined;
-import { TagDelimiter } from "@rcsb/rcsb-api-tools/build/RcsbUtils/TagDelimiter";
+import { TagDelimiter } from "@rcsb/rcsb-api-tools/lib/RcsbUtils/TagDelimiter";
 export class PlainObservedAlignmentTrackFactory {
     constructor(entityInstanceTranslator) {
         this.unObservedResidues = new Map();

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/PlainObservedAlignmentTrackFactory.js.map

@@ -1 +1 @@
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package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/PositionalScoreAlignmentTrackFactory.d.ts

@@ -1,6 +1,6 @@
 import { RcsbFvTrackDataElementInterface } from "@rcsb/rcsb-saguaro/lib/RcsbDataManager/RcsbDataManager";
 import { RcsbFvRowConfigInterface } from "@rcsb/rcsb-saguaro/lib/RcsbFv/RcsbFvConfig/RcsbFvConfigInterface";
-import { AlignedRegions, SequenceAnnotations, TargetAlignments } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
+import { AlignedRegions, SequenceAnnotations, TargetAlignments } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
 import { AlignmentContextInterface, PolymerEntityInstanceTranslate } from "../../../../RcsbUtils/Translators/PolymerEntityInstanceTranslate";
 import { TrackFactoryInterface } from "../TrackFactoryInterface";
 import { AlignmentRequestContextType } from "./AlignmentTrackFactory";

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/PositionalScoreAlignmentTrackFactory.js

@@ -1,5 +1,5 @@
 import { __awaiter } from "tslib";
-import { FeaturesType } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
+import { FeaturesType } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
 import { Operator } from "../../../../RcsbUtils/Helpers/Operator";
 import { range } from "lodash";
 import { PlainAlignmentTrackFactory } from "./PlainAlignmentTrackFactory";
@@ -7,7 +7,7 @@ import { TrackUtils } from "./Helper/TrackUtils";
 import { rcsbRequestCtxManager } from "../../../../RcsbRequest/RcsbRequestContextManager";
 import { Assertions } from "../../../../RcsbUtils/Helpers/Assertions";
 var assertDefined = Assertions.assertDefined;
-import { TagDelimiter } from "@rcsb/rcsb-api-tools/build/RcsbUtils/TagDelimiter";
+import { TagDelimiter } from "@rcsb/rcsb-api-tools/lib/RcsbUtils/TagDelimiter";
 export class PositionalScoreAlignmentTrackFactory {
     constructor(entityInstanceTranslator) {
         this.positionalScores = new Map();

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/PositionalScoreAlignmentTrackFactory.js.map

@@ -1 +1 @@
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package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/SequenceTrackFactory.js

@@ -1,10 +1,10 @@
 import { __awaiter } from "tslib";
-import { SequenceReference } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
+import { SequenceReference } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
 import { SequenceTrackTitleFactory } from "../TrackTitleFactoryImpl/SequenceTrackTitleFactory";
 import { TrackUtils } from "./Helper/TrackUtils";
 import { Assertions } from "../../../../RcsbUtils/Helpers/Assertions";
 var assertDefined = Assertions.assertDefined;
-import { TagDelimiter } from "@rcsb/rcsb-api-tools/build/RcsbUtils/TagDelimiter";
+import { TagDelimiter } from "@rcsb/rcsb-api-tools/lib/RcsbUtils/TagDelimiter";
 export class SequenceTrackFactory {
     constructor(entityInstanceTranslator, trackTitleFactory) {
         this.entityInstanceTranslator = undefined;

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/SequenceTrackFactory.js.map

@@ -1 +1 @@
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package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/AlignmentTrackTitleFactory.d.ts

@@ -1,6 +1,6 @@
 import { RcsbFvLink } from "@rcsb/rcsb-saguaro/lib/RcsbFv/RcsbFvConfig/RcsbFvConfigInterface";
 import { TrackTitleFactoryInterface } from "../TrackTitleFactoryInterface";
-import { TargetAlignments } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
+import { TargetAlignments } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
 import { AlignmentRequestContextType } from "../TrackFactoryImpl/AlignmentTrackFactory";
 import { PolymerEntityInstanceTranslate } from "../../../../RcsbUtils/Translators/PolymerEntityInstanceTranslate";
 export declare class AlignmentTrackTitleFactory implements TrackTitleFactoryInterface<[AlignmentRequestContextType, TargetAlignments]> {

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/AlignmentTrackTitleFactory.js

@@ -1,7 +1,7 @@
 import { __awaiter } from "tslib";
 import { ExperimentalAlignmentTrackTitleFactory } from "./ExperimentalAlignmentTrackTitleFactory";
 import { ModelAlignmentTrackTitleFactory } from "./ModelAlignmentTrackTitleFactory";
-import { TagDelimiter } from "@rcsb/rcsb-api-tools/build/RcsbUtils/TagDelimiter";
+import { TagDelimiter } from "@rcsb/rcsb-api-tools/lib/RcsbUtils/TagDelimiter";
 export class AlignmentTrackTitleFactory {
     constructor(entityInstanceTranslator) {
         this.experimentalTrackTitleFactory = new ExperimentalAlignmentTrackTitleFactory(entityInstanceTranslator);

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/AlignmentTrackTitleFactory.js.map

@@ -1 +1 @@
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+{"version":3,"file":"AlignmentTrackTitleFactory.js","sourceRoot":"","sources":["../../../../../src/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/AlignmentTrackTitleFactory.ts"],"names":[],"mappings":";AAKA,OAAO,EAAC,sCAAsC,EAAC,MAAM,0CAA0C,CAAC;AAChG,OAAO,EAAC,+BAA+B,EAAC,MAAM,mCAAmC,CAAC;AAClF,OAAO,EAAC,YAAY,EAAC,MAAM,iDAAiD,CAAC;AAE7E,MAAM,OAAO,0BAA0B;IAKnC,YAAY,wBAAyD;QACjE,IAAI,CAAC,6BAA6B,GAAG,IAAI,sCAAsC,CAAC,wBAAwB,CAAC,CAAC;QAC1G,IAAI,CAAC,sBAAsB,GAAG,IAAI,+BAA+B,CAAC,wBAAwB,CAAC,CAAC;IAChG,CAAC;IAEY,aAAa,CAAC,qBAAkD,EAAE,eAAiC;;YAC5G,IAAG,eAAe,CAAC,SAAS,IAAI,YAAY,CAAC,OAAO,CAAC,eAAe,CAAC,SAAS,CAAC;gBAC/E,OAAO,IAAI,CAAC,sBAAsB,CAAC,aAAa,CAAC,qBAAqB,EAAE,eAAe,CAAC,CAAC;;gBAEzF,OAAO,IAAI,CAAC,6BAA6B,CAAC,aAAa,CAAC,qBAAqB,EAAE,eAAe,CAAC,CAAC;QACpG,CAAC;KAAA;IAEY,mBAAmB,CAAC,qBAAkD,EAAE,eAAiC;;YAClH,IAAG,eAAe,CAAC,SAAS,IAAI,YAAY,CAAC,OAAO,CAAC,eAAe,CAAC,SAAS,CAAC;gBAC3E,OAAO,IAAI,CAAC,sBAAsB,CAAC,mBAAmB,CAAC,qBAAqB,EAAE,eAAe,CAAC,CAAC;;gBAE/F,OAAO,IAAI,CAAC,6BAA6B,CAAC,mBAAmB,CAAC,qBAAqB,EAAE,eAAe,CAAC,CAAC;QAC9G,CAAC;KAAA;IAEY,sBAAsB,CAAC,qBAAkD,EAAE,eAAiC;;YACrH,IAAG,eAAe,CAAC,SAAS,IAAI,YAAY,CAAC,OAAO,CAAC,eAAe,CAAC,SAAS,CAAC;gBAC3E,OAAO,IAAI,CAAC,sBAAsB,CAAC,sBAAsB,CAAC,qBAAqB,EAAE,eAAe,CAAC,CAAC;;gBAElG,OAAO,IAAI,CAAC,6BAA6B,CAAC,sBAAsB,CAAC,qBAAqB,EAAE,eAAe,CAAC,CAAC;QACjH,CAAC;KAAA;CAEJ"}

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/ExperimentalAlignmentTrackTitleFactory.d.ts

@@ -1,6 +1,6 @@
 import { RcsbFvLink } from "@rcsb/rcsb-saguaro/lib/RcsbFv/RcsbFvConfig/RcsbFvConfigInterface";
 import { TrackTitleFactoryInterface } from "../TrackTitleFactoryInterface";
-import { TargetAlignments } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
+import { TargetAlignments } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
 import { AlignmentRequestContextType } from "../TrackFactoryImpl/AlignmentTrackFactory";
 import { PolymerEntityInstanceTranslate } from "../../../../RcsbUtils/Translators/PolymerEntityInstanceTranslate";
 export declare class ExperimentalAlignmentTrackTitleFactory implements TrackTitleFactoryInterface<[AlignmentRequestContextType, TargetAlignments]> {

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/ExperimentalAlignmentTrackTitleFactory.js

@@ -1,10 +1,10 @@
 import { __awaiter } from "tslib";
-import { SequenceReference } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
+import { SequenceReference } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
 import resource from "../../../../RcsbServerConfig/web.resources.json";
 import { RcsbAnnotationConstants } from "../../../../RcsbAnnotationConfig/RcsbAnnotationConstants";
 import { Assertions } from "../../../../RcsbUtils/Helpers/Assertions";
 var assertDefined = Assertions.assertDefined;
-import { TagDelimiter } from "@rcsb/rcsb-api-tools/build/RcsbUtils/TagDelimiter";
+import { TagDelimiter } from "@rcsb/rcsb-api-tools/lib/RcsbUtils/TagDelimiter";
 export class ExperimentalAlignmentTrackTitleFactory {
     constructor(entityInstanceTranslator) {
         this.entityInstanceTranslator = undefined;

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/ExperimentalAlignmentTrackTitleFactory.js.map

@@ -1 +1 @@
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package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/ModelAlignmentTrackTitleFactory.d.ts

@@ -1,7 +1,7 @@
 import { RcsbFvLink } from "@rcsb/rcsb-saguaro/lib/RcsbFv/RcsbFvConfig/RcsbFvConfigInterface";
 import { TrackTitleFactoryInterface } from "../TrackTitleFactoryInterface";
 import { AlignmentRequestContextType } from "../TrackFactoryImpl/AlignmentTrackFactory";
-import { TargetAlignments } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
+import { TargetAlignments } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
 import { PolymerEntityInstanceTranslate } from "../../../../RcsbUtils/Translators/PolymerEntityInstanceTranslate";
 export declare class ModelAlignmentTrackTitleFactory implements TrackTitleFactoryInterface<[AlignmentRequestContextType, TargetAlignments]> {
     private readonly alignmentTrackTitleFactory;

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/SequenceTrackTitleFactory.js

@@ -1,11 +1,11 @@
 import { __awaiter } from "tslib";
-import { SequenceReference } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
+import { SequenceReference } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
 import resource from "../../../../RcsbServerConfig/web.resources.json";
 import { RcsbAnnotationConstants } from "../../../../RcsbAnnotationConfig/RcsbAnnotationConstants";
 import { TrackUtils } from "../TrackFactoryImpl/Helper/TrackUtils";
 import { Assertions } from "../../../../RcsbUtils/Helpers/Assertions";
 var assertDefined = Assertions.assertDefined;
-import { TagDelimiter } from "@rcsb/rcsb-api-tools/build/RcsbUtils/TagDelimiter";
+import { TagDelimiter } from "@rcsb/rcsb-api-tools/lib/RcsbUtils/TagDelimiter";
 export class SequenceTrackTitleFactory {
     constructor(entityInstanceTranslator) {
         this.entityInstanceTranslator = undefined;

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/SequenceTrackTitleFactory.js.map

@@ -1 +1 @@
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+{"version":3,"file":"SequenceTrackTitleFactory.js","sourceRoot":"","sources":["../../../../../src/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/SequenceTrackTitleFactory.ts"],"names":[],"mappings":";AAGA,OAAO,EAAC,iBAAiB,EAAC,MAAM,6DAA6D,CAAC;AAC9F,OAAO,QAAQ,MAAM,iDAAiD,CAAC;AACvE,OAAO,EAAC,uBAAuB,EAAC,MAAM,0DAA0D,CAAC;AAEjG,OAAO,EAAC,UAAU,EAAC,MAAM,uCAAuC,CAAC;AACjE,OAAO,EAAC,UAAU,EAAC,MAAM,0CAA0C,CAAC;AACpE,IAAO,aAAa,GAAG,UAAU,CAAC,aAAa,CAAC;AAChD,OAAO,EAAC,YAAY,EAAC,MAAM,iDAAiD,CAAC;AAE7E,MAAM,OAAO,yBAAyB;IAIlC,YAAY,wBAAyD;QAFpD,6BAAwB,GAA+C,SAAS,CAAC;QAG9F,IAAI,CAAC,wBAAwB,GAAG,wBAAwB,CAAC;IAC7D,CAAC;IAEY,aAAa,CAAC,qBAAkD;;;YACzE,IAAI,QAA0B,CAAC;YAC/B,IAAG,CAAC,qBAAqB,CAAC,mBAAmB,IAAI,qBAAqB,CAAC,IAAI,KAAK,iBAAiB,CAAC,OAAO,EAAC,CAAC;gBACvG,QAAQ,GAAG;oBACP,UAAU,EAAE,MAAA,qBAAqB,CAAC,OAAO,mCAAI,EAAE;oBAC/C,GAAG,EAAG,QAAgB,CAAC,YAAY,CAAC,GAAG,GAAC,qBAAqB,CAAC,OAAO;oBACrE,KAAK,EAAE;wBACH,UAAU,EAAC,MAAM;wBACjB,KAAK,EAAC,uBAAuB,CAAC,mBAAmB,CAAC,QAAQ;qBAC7D;iBACJ,CAAC;YACN,CAAC;iBAAK,IAAG,CAAC,qBAAqB,CAAC,mBAAmB,IAAI,qBAAqB,CAAC,IAAI,KAAK,iBAAiB,CAAC,WAAW,IAAI,IAAI,CAAC,wBAAwB,IAAE,IAAI,EAAE,CAAC;gBACzJ,QAAQ,GAAG;oBACP,UAAU,EAAE,qBAAqB,CAAC,OAAO,CAAC,CAAC,CAAC,IAAI,CAAC,eAAe,CAAC,qBAAqB,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,EAAE;oBACpG,KAAK,EAAE;wBACH,UAAU,EAAC,MAAM;qBACpB;iBACJ,CAAC;YACN,CAAC;iBAAI,CAAC;gBACF,QAAQ,GAAG;oBACP,UAAU,EAAE,MAAA,qBAAqB,CAAC,OAAO,mCAAI,CAAC,MAAA,qBAAqB,CAAC,OAAO,mCAAI,EAAE,CAAC;oBAClF,KAAK,EAAE;wBACH,UAAU,EAAC,MAAM;qBACpB;iBACJ,CAAC;YACN,CAAC;YACD,OAAO,QAAQ,CAAA;QACnB,CAAC;KAAA;IAEY,mBAAmB,CAAC,qBAAkD;;;YAC/E,OAAO,CAAC,qBAAqB,CAAC,IAAI,IAAI,CAAC,qBAAqB,CAAC,IAAI,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,qBAAqB,CAAC,IAAI,CAAC,OAAO,CAAC,GAAG,EAAC,GAAG,CAAC,GAAC,GAAG,GAAC,YAAY,CAAC,aAAa,CAAC,CAAC,CAAC,CAAC,MAAA,qBAAqB,CAAC,cAAc,mCAAI,EAAE,CAAC,CAAC;QACnN,CAAC;KAAA;IAEY,sBAAsB,CAAC,qBAAkD;;;YAClF,MAAM,OAAO,GAAG,MAAA,qBAAqB,CAAC,OAAO,mCAAI,qBAAqB,CAAC,OAAO,CAAC;YAC/E,aAAa,CAAC,OAAO,CAAC,EAAE,aAAa,CAAC,qBAAqB,CAAC,IAAI,CAAC,CAAC;YAClE,OAAO,UAAU,CAAC,6BAA6B,CAAC,OAAO,EAAC,qBAAqB,CAAC,IAAI,CAAC,CAAC,KAAK,CAAC;QAC9F,CAAC;KAAA;IAEO,eAAe,CAAC,QAAgB;;QACpC,MAAM,WAAW,GAAW,QAAQ,CAAC,KAAK,CAAC,YAAY,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,CAAA;QACpE,MAAM,UAAU,GAAuB,MAAA,IAAI,CAAC,wBAAwB,0CAAE,mBAAmB,CAAC,WAAW,CAAC,CAAC;QACvG,OAAO,CAAC,WAAW,KAAK,UAAU,IAAI,CAAC,UAAU,CAAA,CAAC,CAAC,WAAW,CAAC,CAAC,CAAC,WAAW,GAAC,QAAQ,GAAC,UAAU,GAAC,GAAG,CAAC,CAAC;IAC1G,CAAC;CAEJ"}

package/lib/RcsbFvWeb/RcsbFvGroup/GroupPfvTabs.d.ts

@@ -1,7 +1,7 @@
 import React, { ReactNode } from "react";
 import { RcsbFvAdditionalConfig } from "../RcsbFvModule/RcsbFvModuleInterface";
-import { SearchQuery } from "@rcsb/rcsb-api-tools/build/RcsbSearch/Types/SearchQueryInterface";
-import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/build/RcsbDw/Types/DwEnums";
+import { SearchQuery } from "@rcsb/rcsb-api-tools/lib/RcsbSearch/Types/SearchQueryInterface";
+import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/lib/RcsbDw/Types/DwEnums";
 interface SequenceTabInterface {
     groupProvenanceId: GroupProvenanceId;
     groupId: string;

package/lib/RcsbFvWeb/RcsbFvGroup/GroupPfvTabs.js

@@ -1,11 +1,11 @@
 import { __awaiter } from "tslib";
 import { jsx as _jsx } from "react/jsx-runtime";
 import React from "react";
-import { FieldName, OperationType, AnnotationReference, } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
+import { FieldName, OperationType, AnnotationReference, } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
 import { searchRequestProperty } from "../../RcsbSeacrh/SearchRequestProperty";
-import { ReturnType } from "@rcsb/rcsb-api-tools/build/RcsbSearch/Types/SearchEnums";
+import { ReturnType } from "@rcsb/rcsb-api-tools/lib/RcsbSearch/Types/SearchEnums";
 import { RcsbTabs } from "../RcsbFvComponents/RcsbTabs";
-import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/build/RcsbDw/Types/DwEnums";
+import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/lib/RcsbDw/Types/DwEnums";
 import { SearchQueryTools as SQT } from "../../RcsbSeacrh/SearchQueryTools";
 import { GroupPfvApp as GPA } from "./GroupTabs/GroupPfvApp";
 import { asyncScheduler } from "rxjs";

package/lib/RcsbFvWeb/RcsbFvGroup/GroupPfvTabs.js.map

@@ -1 +1 @@
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package/lib/RcsbFvWeb/RcsbFvGroup/GroupTabs/GroupPfvApp.d.ts

@@ -1,10 +1,10 @@
 import { RcsbFvAdditionalConfig, RcsbFvModulePublicInterface } from "../../RcsbFvModule/RcsbFvModuleInterface";
-import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/build/RcsbDw/Types/DwEnums";
-import { GroupReference } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
+import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/lib/RcsbDw/Types/DwEnums";
+import { GroupReference } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
 import { ActionMethods } from "../../../RcsbFvUI/Helper/ActionMethods";
 export declare namespace GroupPfvApp {
     function alignment(elementId: string, groupProvenanceId: GroupProvenanceId, groupId: string, entityCount: number, additionalConfig?: RcsbFvAdditionalConfig & ActionMethods.FvChangeConfigInterface): Promise<RcsbFvModulePublicInterface>;
     function structure(elementId: string, groupProvenanceId: GroupProvenanceId, groupId: string, nTargets: number, additionalConfig?: RcsbFvAdditionalConfig): Promise<RcsbFvModulePublicInterface>;
     function bindingSites(elementId: string, groupProvenanceId: GroupProvenanceId, groupId: string, nTargets: number, additionalConfig?: RcsbFvAdditionalConfig): Promise<RcsbFvModulePublicInterface>;
 }
-export declare function getReferenceFromGroupProvenance(groupProvenanceId: GroupProvenanceId): GroupReference;
+export declare function getReferenceFromGroupProvenance(groupProvenanceId: GroupProvenanceId): GroupReference | undefined;

package/lib/RcsbFvWeb/RcsbFvGroup/GroupTabs/GroupPfvApp.js

@@ -1,9 +1,9 @@
 import { __awaiter } from "tslib";
-import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/build/RcsbDw/Types/DwEnums";
+import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/lib/RcsbDw/Types/DwEnums";
 import { RcsbFvUniprotBuilder } from "../../RcsbFvBuilder/RcsbFvUniprotBuilder";
 import { groupExternalTrackBuilder } from "../../../RcsbUtils/TrackGenerators/GroupExternalTrackBuilder";
 import { RcsbFvGroupBuilder } from "../../RcsbFvBuilder/RcsbFvGroupBuilder";
-import { FieldName, GroupReference, OperationType, SequenceReference, AnnotationReference, FeaturesType } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
+import { FieldName, GroupReference, OperationType, SequenceReference, AnnotationReference, FeaturesType } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
 import { alignmentGlobalLigandBindingSite } from "../../../RcsbUtils/TrackGenerators/AlignmentGlobalBindingSite";
 import { RcsbTabs } from "../../RcsbFvComponents/RcsbTabs";
 import { GroupPfvUI } from "../../../RcsbFvUI/GroupPfvUI";