@rcsb/rcsb-saguaro-app 6.3.7-dev-js-seqcoord.19 → 6.3.7-dev-js-seqcoord.21
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/build/app.js +1 -1
- package/build/constants.js +1 -1
- package/build/plot.js +1 -1
- package/build/worker.js +1 -1
- package/lib/RcsbAnnotationConfig/RcsbAnnotationConfig.d.ts +1 -1
- package/lib/RcsbCollectTools/AlignmentCollector/AlignmentCollector.d.ts +1 -1
- package/lib/RcsbCollectTools/AlignmentCollector/AlignmentCollectorInterface.d.ts +1 -1
- package/lib/RcsbCollectTools/AnnotationCollector/AnnotationCollector.d.ts +1 -1
- package/lib/RcsbCollectTools/AnnotationCollector/AnnotationCollectorInterface.d.ts +1 -1
- package/lib/RcsbCollectTools/DataCollectors/AssemblyInterfacesCollector.d.ts +1 -1
- package/lib/RcsbCollectTools/DataCollectors/EntryAssembliesCollector.d.ts +1 -1
- package/lib/RcsbCollectTools/DataCollectors/GroupMemberCollector.d.ts +1 -1
- package/lib/RcsbCollectTools/DataCollectors/GroupPropertyCollector.d.ts +1 -1
- package/lib/RcsbCollectTools/DataCollectors/InterfaceInstanceCollector.d.ts +1 -1
- package/lib/RcsbCollectTools/DataCollectors/MultipleEntityInstancesCollector.d.ts +1 -1
- package/lib/RcsbCollectTools/DataCollectors/MultipleEntryPropertyCollector.d.ts +2 -2
- package/lib/RcsbCollectTools/DataCollectors/MultiplePolymerEntityCollector.d.ts +1 -1
- package/lib/RcsbCollectTools/DataCollectors/MultiplePolymerEntityCollector.js +1 -1
- package/lib/RcsbCollectTools/DataCollectors/MultiplePolymerEntityCollector.js.map +1 -1
- package/lib/RcsbCollectTools/DataCollectors/PolymerEntityChromosomeCollector.js +1 -1
- package/lib/RcsbCollectTools/DataCollectors/PolymerEntityChromosomeCollector.js.map +1 -1
- package/lib/RcsbCollectTools/DataCollectors/PolymerEntityInstancesCollector.d.ts +2 -2
- package/lib/RcsbCollectTools/FeatureTools/ExternalTrackBuilderInterface.d.ts +1 -1
- package/lib/RcsbExport/FeatureType.d.ts +1 -1
- package/lib/RcsbExport/FeatureType.js +1 -1
- package/lib/RcsbExport/FeatureType.js.map +1 -1
- package/lib/RcsbFvExamples/ExternalDataProvider.js +1 -1
- package/lib/RcsbFvExamples/ExternalDataProvider.js.map +1 -1
- package/lib/RcsbFvExamples/GroupHistogram.js +1 -1
- package/lib/RcsbFvExamples/GroupHistogram.js.map +1 -1
- package/lib/RcsbFvExamples/InstanceSequenceFv.js +1 -1
- package/lib/RcsbFvExamples/InstanceSequenceFv.js.map +1 -1
- package/lib/RcsbFvExamples/SequenceIdentityGroupFv.js +1 -1
- package/lib/RcsbFvExamples/SequenceIdentityGroupFv.js.map +1 -1
- package/lib/RcsbFvExamples/UniprotGroupFv.js +2 -2
- package/lib/RcsbFvExamples/UniprotGroupFv.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvChromosomeBuilder.js +1 -1
- package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvChromosomeBuilder.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvEntityBuilder.js +2 -2
- package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvEntityBuilder.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvGroupAlignmentBuilder.d.ts +2 -2
- package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvGroupAlignmentBuilder.js +3 -3
- package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvGroupAlignmentBuilder.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvGroupBuilder.d.ts +1 -1
- package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvInstanceBuilder.js +1 -1
- package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvInstanceBuilder.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvProteinSequenceBuilder.d.ts +1 -1
- package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvProteinSequenceBuilder.js +1 -1
- package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvProteinSequenceBuilder.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvUniprotBuilder.js +1 -1
- package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvUniprotBuilder.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvBuilder.d.ts +2 -2
- package/lib/RcsbFvWeb/RcsbFvBuilder.js +1 -1
- package/lib/RcsbFvWeb/RcsbFvBuilder.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/AlignmentBlockFactory.d.ts +1 -1
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/AnnotationsBlockFactory.d.ts +1 -1
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockManager/AnnotationBlockManager.d.ts +1 -1
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockManager/AnnotationTrackManager.d.ts +1 -1
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockManager/AnnotationTrackManager.js +2 -2
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockManager/AnnotationTrackManager.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockManager/TrackManagerInterface.d.ts +1 -1
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/AlignmentTrackFactory.d.ts +1 -1
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/Helper/TrackUtils.d.ts +1 -1
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/Helper/TrackUtils.js +1 -1
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/Helper/TrackUtils.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/MsaAlignmentTrackFactory.d.ts +1 -1
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/MsaAlignmentTrackFactory.js +1 -1
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/MsaAlignmentTrackFactory.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/PlainAlignmentTrackFactory.d.ts +1 -1
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/PlainObservedAlignmentTrackFactory.d.ts +1 -1
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/PlainObservedAlignmentTrackFactory.js +1 -1
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/PlainObservedAlignmentTrackFactory.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/PositionalScoreAlignmentTrackFactory.d.ts +1 -1
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/PositionalScoreAlignmentTrackFactory.js +2 -2
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/PositionalScoreAlignmentTrackFactory.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/SequenceTrackFactory.js +2 -2
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/SequenceTrackFactory.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/AlignmentTrackTitleFactory.d.ts +1 -1
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/AlignmentTrackTitleFactory.js +1 -1
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/AlignmentTrackTitleFactory.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/ExperimentalAlignmentTrackTitleFactory.d.ts +1 -1
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/ExperimentalAlignmentTrackTitleFactory.js +2 -2
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/ExperimentalAlignmentTrackTitleFactory.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/ModelAlignmentTrackTitleFactory.d.ts +1 -1
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/SequenceTrackTitleFactory.js +2 -2
- package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/SequenceTrackTitleFactory.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvGroup/GroupPfvTabs.d.ts +2 -2
- package/lib/RcsbFvWeb/RcsbFvGroup/GroupPfvTabs.js +3 -3
- package/lib/RcsbFvWeb/RcsbFvGroup/GroupPfvTabs.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvGroup/GroupTabs/GroupPfvApp.d.ts +3 -3
- package/lib/RcsbFvWeb/RcsbFvGroup/GroupTabs/GroupPfvApp.js +2 -2
- package/lib/RcsbFvWeb/RcsbFvGroup/GroupTabs/GroupPfvApp.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvGroup/RcsbFvGroupTabsBuilder.d.ts +2 -2
- package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvAbstractModule.d.ts +1 -1
- package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvChromosome.js +1 -1
- package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvChromosome.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvEntity.js +2 -2
- package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvEntity.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvGroupAlignment.js +1 -1
- package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvGroupAlignment.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvInstance.js +1 -1
- package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvInstance.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvInterface.d.ts +1 -1
- package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvInterface.js +2 -2
- package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvInterface.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvModuleInterface.d.ts +1 -1
- package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvProteinSequence.js +1 -1
- package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvProteinSequence.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvUniprot.js +1 -1
- package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvUniprot.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvUniprotAlignment.js +1 -1
- package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvUniprotAlignment.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvUniprotEntity.js +2 -2
- package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvUniprotEntity.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvUniprotInstance.js +1 -1
- package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvUniprotInstance.js.map +1 -1
- package/lib/RcsbFvWeb/RcsbFvWorkers/RcsbFvAlignmentCollectorQueue.d.ts +1 -1
- package/lib/RcsbGraphQL/RcsbClient.d.ts +2 -2
- package/lib/RcsbGraphQL/RcsbCoreQueryInterface.d.ts +1 -1
- package/lib/RcsbGraphQL/RcsbQueryAlignment.d.ts +2 -2
- package/lib/RcsbGraphQL/RcsbQueryAnnotations.d.ts +2 -2
- package/lib/RcsbGraphQL/RcsbQueryAssemblyInterfaces.d.ts +2 -2
- package/lib/RcsbGraphQL/RcsbQueryEntryInstances.d.ts +2 -2
- package/lib/RcsbGraphQL/RcsbQueryGroup.d.ts +2 -2
- package/lib/RcsbGraphQL/RcsbQueryInterfaceInstances.d.ts +2 -2
- package/lib/RcsbGraphQL/RcsbQueryMultipleEntityInstances.d.ts +2 -2
- package/lib/RcsbGraphQL/RcsbQueryMultipleEntriesProperties.d.ts +2 -2
- package/lib/RcsbGraphQL/RcsbQueryMultipleInstanceSequences.d.ts +2 -2
- package/lib/RcsbGroupWeb/RcsbGroupBuilder.d.ts +3 -3
- package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupChart/GroupChartEvents.d.ts +1 -1
- package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupChart/GroupChartEvents.js +1 -1
- package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupChart/GroupChartEvents.js.map +1 -1
- package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupChart/GroupChartTools.d.ts +2 -2
- package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupChart/GroupChartTools.js.map +1 -1
- package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupChart/RcsbGroupChartComponent.d.ts +2 -2
- package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupChart/RcsbGroupChartComponent.js.map +1 -1
- package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupChart/RcsbStatsChartComponent.d.ts +3 -3
- package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupContent/RcsbGroupContentComponent.d.ts +2 -2
- package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupContent/RcsbGroupContentComponent.js +1 -1
- package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupContent/RcsbGroupContentComponent.js.map +1 -1
- package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupDisplay.d.ts +3 -3
- package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupMembers/GroupMemberItem.d.ts +2 -2
- package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupMembers/GroupMemberItem.js +2 -2
- package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupMembers/GroupMemberItem.js.map +1 -1
- package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupMembers/GroupMembersGrid.d.ts +2 -2
- package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupMembers/GroupMembersGrid.js +4 -4
- package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupMembers/GroupMembersGrid.js.map +1 -1
- package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupMembers/RcsbGroupMembersComponent.d.ts +3 -3
- package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupMembers/RcsbGroupMembersComponent.js +2 -2
- package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupMembers/RcsbGroupMembersComponent.js.map +1 -1
- package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupSeacrhQuery/RcsbGroupSeacrhQueryComponent.d.ts +2 -2
- package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupSeacrhQuery/SearchQueryContextManager.d.ts +3 -3
- package/lib/RcsbGroupWeb/RcsbGroupView/RcsbResidueChart/ResidueChartTools/ResidueChartTools.js +1 -1
- package/lib/RcsbGroupWeb/RcsbGroupView/RcsbResidueChart/ResidueChartTools/ResidueChartTools.js.map +1 -1
- package/lib/RcsbQueries/QueryCheck.js +1 -1
- package/lib/RcsbQueries/QueryCheck.js.map +1 -1
- package/lib/RcsbRequest/RcsbRequestClient.d.ts +2 -2
- package/lib/RcsbRequest/RcsbRequestClient.js +2 -2
- package/lib/RcsbRequest/RcsbRequestClient.js.map +1 -1
- package/lib/RcsbRequest/RcsbRequestContextManager.d.ts +5 -5
- package/lib/RcsbRequest/RcsbRequestContextManager.js +3 -3
- package/lib/RcsbRequest/RcsbRequestContextManager.js.map +1 -1
- package/lib/RcsbSeacrh/FacetStore/DepositionGroupFacetStore.d.ts +1 -1
- package/lib/RcsbSeacrh/FacetStore/DepositionGroupFacetStore.js +2 -2
- package/lib/RcsbSeacrh/FacetStore/DepositionGroupFacetStore.js.map +1 -1
- package/lib/RcsbSeacrh/FacetStore/EntityGranularitySearchFacetStore.d.ts +1 -1
- package/lib/RcsbSeacrh/FacetStore/EntityGranularitySearchFacetStore.js +2 -2
- package/lib/RcsbSeacrh/FacetStore/EntityGranularitySearchFacetStore.js.map +1 -1
- package/lib/RcsbSeacrh/FacetStore/FacetMemberInterface.d.ts +1 -1
- package/lib/RcsbSeacrh/FacetStore/FacetStoreInterface.d.ts +1 -1
- package/lib/RcsbSeacrh/FacetStore/SequenceGroupFacetStore.d.ts +1 -1
- package/lib/RcsbSeacrh/FacetStore/SequenceGroupFacetStore.js +2 -2
- package/lib/RcsbSeacrh/FacetStore/SequenceGroupFacetStore.js.map +1 -1
- package/lib/RcsbSeacrh/FacetStore/SingleFacets.js +2 -2
- package/lib/RcsbSeacrh/FacetStore/SingleFacets.js.map +1 -1
- package/lib/RcsbSeacrh/FacetStore/UniprotGroupFacetStore.d.ts +1 -1
- package/lib/RcsbSeacrh/FacetStore/UniprotGroupFacetStore.js +2 -2
- package/lib/RcsbSeacrh/FacetStore/UniprotGroupFacetStore.js.map +1 -1
- package/lib/RcsbSeacrh/FacetTools.d.ts +4 -4
- package/lib/RcsbSeacrh/SearchQueryTools.d.ts +5 -5
- package/lib/RcsbSeacrh/SearchQueryTools.js +3 -3
- package/lib/RcsbSeacrh/SearchQueryTools.js.map +1 -1
- package/lib/RcsbSeacrh/SearchRequestProperty.d.ts +4 -4
- package/lib/RcsbUtils/Groups/GroupGapLessTransformer.d.ts +1 -1
- package/lib/RcsbUtils/Groups/GroupProvenanceToAggregationType.d.ts +2 -2
- package/lib/RcsbUtils/Groups/GroupProvenanceToAggregationType.js +3 -2
- package/lib/RcsbUtils/Groups/GroupProvenanceToAggregationType.js.map +1 -1
- package/lib/RcsbUtils/PairwiseAlignmentTools/AlignmentReference.d.ts +1 -1
- package/lib/RcsbUtils/PairwiseAlignmentTools/PairwiseAlignmentBuilder.js +1 -1
- package/lib/RcsbUtils/PairwiseAlignmentTools/PairwiseAlignmentBuilder.js.map +1 -1
- package/lib/RcsbUtils/TrackGenerators/BurialFraction.d.ts +1 -1
- package/lib/RcsbUtils/TrackGenerators/BurialFraction.js +1 -1
- package/lib/RcsbUtils/TrackGenerators/BurialFraction.js.map +1 -1
- package/lib/RcsbUtils/TrackGenerators/BuriedResidues.d.ts +1 -1
- package/lib/RcsbUtils/TrackGenerators/BuriedResidues.js +1 -1
- package/lib/RcsbUtils/TrackGenerators/BuriedResidues.js.map +1 -1
- package/lib/RcsbUtils/TrackGenerators/Logo.d.ts +1 -1
- package/lib/RcsbUtils/TrackGenerators/UnmodeledTrackBuilder.d.ts +1 -1
- package/lib/RcsbUtils/TrackGenerators/UnmodeledTrackBuilder.js +1 -1
- package/lib/RcsbUtils/TrackGenerators/UnmodeledTrackBuilder.js.map +1 -1
- package/lib/RcsbUtils/Translators/MultipleEntityInstanceTranslate.js +1 -1
- package/lib/RcsbUtils/Translators/MultipleEntityInstanceTranslate.js.map +1 -1
- package/lib/RcsbUtils/Translators/PolymerEntityInstanceTranslate.d.ts +1 -1
- package/lib/RcsbUtils/Translators/PolymerEntityInstanceTranslate.js +2 -2
- package/lib/RcsbUtils/Translators/PolymerEntityInstanceTranslate.js.map +1 -1
- package/lib/commonjs/RcsbAnnotationConfig/RcsbAnnotationConfig.d.ts +1 -1
- package/lib/commonjs/RcsbCollectTools/AlignmentCollector/AlignmentCollector.d.ts +1 -1
- package/lib/commonjs/RcsbCollectTools/AlignmentCollector/AlignmentCollectorInterface.d.ts +1 -1
- package/lib/commonjs/RcsbCollectTools/AnnotationCollector/AnnotationCollector.d.ts +1 -1
- package/lib/commonjs/RcsbCollectTools/AnnotationCollector/AnnotationCollectorInterface.d.ts +1 -1
- package/lib/commonjs/RcsbCollectTools/DataCollectors/AssemblyInterfacesCollector.d.ts +1 -1
- package/lib/commonjs/RcsbCollectTools/DataCollectors/EntryAssembliesCollector.d.ts +1 -1
- package/lib/commonjs/RcsbCollectTools/DataCollectors/GroupMemberCollector.d.ts +1 -1
- package/lib/commonjs/RcsbCollectTools/DataCollectors/GroupPropertyCollector.d.ts +1 -1
- package/lib/commonjs/RcsbCollectTools/DataCollectors/InterfaceInstanceCollector.d.ts +1 -1
- package/lib/commonjs/RcsbCollectTools/DataCollectors/MultipleEntityInstancesCollector.d.ts +1 -1
- package/lib/commonjs/RcsbCollectTools/DataCollectors/MultipleEntryPropertyCollector.d.ts +2 -2
- package/lib/commonjs/RcsbCollectTools/DataCollectors/MultiplePolymerEntityCollector.d.ts +1 -1
- package/lib/commonjs/RcsbCollectTools/DataCollectors/MultiplePolymerEntityCollector.js +1 -1
- package/lib/commonjs/RcsbCollectTools/DataCollectors/PolymerEntityChromosomeCollector.js +1 -1
- package/lib/commonjs/RcsbCollectTools/DataCollectors/PolymerEntityInstancesCollector.d.ts +2 -2
- package/lib/commonjs/RcsbCollectTools/FeatureTools/ExternalTrackBuilderInterface.d.ts +1 -1
- package/lib/commonjs/RcsbExport/FeatureType.d.ts +1 -1
- package/lib/commonjs/RcsbExport/FeatureType.js +1 -1
- package/lib/commonjs/RcsbFvExamples/ExternalDataProvider.js +1 -1
- package/lib/commonjs/RcsbFvExamples/GroupHistogram.js +1 -1
- package/lib/commonjs/RcsbFvExamples/InstanceSequenceFv.js +1 -1
- package/lib/commonjs/RcsbFvExamples/SequenceIdentityGroupFv.js +1 -1
- package/lib/commonjs/RcsbFvExamples/UniprotGroupFv.js +2 -2
- package/lib/commonjs/RcsbFvWeb/RcsbFvBuilder/RcsbFvChromosomeBuilder.js +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvBuilder/RcsbFvEntityBuilder.js +2 -2
- package/lib/commonjs/RcsbFvWeb/RcsbFvBuilder/RcsbFvGroupAlignmentBuilder.d.ts +2 -2
- package/lib/commonjs/RcsbFvWeb/RcsbFvBuilder/RcsbFvGroupAlignmentBuilder.js +3 -3
- package/lib/commonjs/RcsbFvWeb/RcsbFvBuilder/RcsbFvGroupBuilder.d.ts +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvBuilder/RcsbFvInstanceBuilder.js +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvBuilder/RcsbFvProteinSequenceBuilder.d.ts +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvBuilder/RcsbFvProteinSequenceBuilder.js +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvBuilder/RcsbFvUniprotBuilder.js +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvBuilder.d.ts +2 -2
- package/lib/commonjs/RcsbFvWeb/RcsbFvBuilder.js +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/AlignmentBlockFactory.d.ts +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/AnnotationsBlockFactory.d.ts +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockManager/AnnotationBlockManager.d.ts +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockManager/AnnotationTrackManager.d.ts +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockManager/AnnotationTrackManager.js +2 -2
- package/lib/commonjs/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockManager/TrackManagerInterface.d.ts +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/AlignmentTrackFactory.d.ts +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/Helper/TrackUtils.d.ts +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/Helper/TrackUtils.js +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/MsaAlignmentTrackFactory.d.ts +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/MsaAlignmentTrackFactory.js +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/PlainAlignmentTrackFactory.d.ts +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/PlainObservedAlignmentTrackFactory.d.ts +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/PlainObservedAlignmentTrackFactory.js +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/PositionalScoreAlignmentTrackFactory.d.ts +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/PositionalScoreAlignmentTrackFactory.js +2 -2
- package/lib/commonjs/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/SequenceTrackFactory.js +2 -2
- package/lib/commonjs/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/AlignmentTrackTitleFactory.d.ts +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/AlignmentTrackTitleFactory.js +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/ExperimentalAlignmentTrackTitleFactory.d.ts +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/ExperimentalAlignmentTrackTitleFactory.js +2 -2
- package/lib/commonjs/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/ModelAlignmentTrackTitleFactory.d.ts +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/SequenceTrackTitleFactory.js +2 -2
- package/lib/commonjs/RcsbFvWeb/RcsbFvGroup/GroupPfvTabs.d.ts +2 -2
- package/lib/commonjs/RcsbFvWeb/RcsbFvGroup/GroupPfvTabs.js +3 -3
- package/lib/commonjs/RcsbFvWeb/RcsbFvGroup/GroupTabs/GroupPfvApp.d.ts +3 -3
- package/lib/commonjs/RcsbFvWeb/RcsbFvGroup/GroupTabs/GroupPfvApp.js +2 -2
- package/lib/commonjs/RcsbFvWeb/RcsbFvGroup/RcsbFvGroupTabsBuilder.d.ts +2 -2
- package/lib/commonjs/RcsbFvWeb/RcsbFvModule/RcsbFvAbstractModule.d.ts +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvModule/RcsbFvChromosome.js +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvModule/RcsbFvEntity.js +2 -2
- package/lib/commonjs/RcsbFvWeb/RcsbFvModule/RcsbFvGroupAlignment.js +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvModule/RcsbFvInstance.js +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvModule/RcsbFvInterface.d.ts +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvModule/RcsbFvInterface.js +2 -2
- package/lib/commonjs/RcsbFvWeb/RcsbFvModule/RcsbFvModuleInterface.d.ts +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvModule/RcsbFvProteinSequence.js +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvModule/RcsbFvUniprot.js +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvModule/RcsbFvUniprotAlignment.js +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvModule/RcsbFvUniprotEntity.js +2 -2
- package/lib/commonjs/RcsbFvWeb/RcsbFvModule/RcsbFvUniprotInstance.js +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvWorkers/RcsbFvAlignmentCollectorQueue.d.ts +1 -1
- package/lib/commonjs/RcsbGraphQL/RcsbClient.d.ts +2 -2
- package/lib/commonjs/RcsbGraphQL/RcsbCoreQueryInterface.d.ts +1 -1
- package/lib/commonjs/RcsbGraphQL/RcsbQueryAlignment.d.ts +2 -2
- package/lib/commonjs/RcsbGraphQL/RcsbQueryAnnotations.d.ts +2 -2
- package/lib/commonjs/RcsbGraphQL/RcsbQueryAssemblyInterfaces.d.ts +2 -2
- package/lib/commonjs/RcsbGraphQL/RcsbQueryEntryInstances.d.ts +2 -2
- package/lib/commonjs/RcsbGraphQL/RcsbQueryGroup.d.ts +2 -2
- package/lib/commonjs/RcsbGraphQL/RcsbQueryInterfaceInstances.d.ts +2 -2
- package/lib/commonjs/RcsbGraphQL/RcsbQueryMultipleEntityInstances.d.ts +2 -2
- package/lib/commonjs/RcsbGraphQL/RcsbQueryMultipleEntriesProperties.d.ts +2 -2
- package/lib/commonjs/RcsbGraphQL/RcsbQueryMultipleInstanceSequences.d.ts +2 -2
- package/lib/commonjs/RcsbGroupWeb/RcsbGroupBuilder.d.ts +3 -3
- package/lib/commonjs/RcsbGroupWeb/RcsbGroupView/RcsbGroupChart/GroupChartEvents.d.ts +1 -1
- package/lib/commonjs/RcsbGroupWeb/RcsbGroupView/RcsbGroupChart/GroupChartEvents.js +1 -1
- package/lib/commonjs/RcsbGroupWeb/RcsbGroupView/RcsbGroupChart/GroupChartTools.d.ts +2 -2
- package/lib/commonjs/RcsbGroupWeb/RcsbGroupView/RcsbGroupChart/RcsbGroupChartComponent.d.ts +2 -2
- package/lib/commonjs/RcsbGroupWeb/RcsbGroupView/RcsbGroupChart/RcsbStatsChartComponent.d.ts +3 -3
- package/lib/commonjs/RcsbGroupWeb/RcsbGroupView/RcsbGroupContent/RcsbGroupContentComponent.d.ts +2 -2
- package/lib/commonjs/RcsbGroupWeb/RcsbGroupView/RcsbGroupContent/RcsbGroupContentComponent.js +1 -1
- package/lib/commonjs/RcsbGroupWeb/RcsbGroupView/RcsbGroupDisplay.d.ts +3 -3
- package/lib/commonjs/RcsbGroupWeb/RcsbGroupView/RcsbGroupMembers/GroupMemberItem.d.ts +2 -2
- package/lib/commonjs/RcsbGroupWeb/RcsbGroupView/RcsbGroupMembers/GroupMemberItem.js +2 -2
- package/lib/commonjs/RcsbGroupWeb/RcsbGroupView/RcsbGroupMembers/GroupMembersGrid.d.ts +2 -2
- package/lib/commonjs/RcsbGroupWeb/RcsbGroupView/RcsbGroupMembers/GroupMembersGrid.js +4 -4
- package/lib/commonjs/RcsbGroupWeb/RcsbGroupView/RcsbGroupMembers/RcsbGroupMembersComponent.d.ts +3 -3
- package/lib/commonjs/RcsbGroupWeb/RcsbGroupView/RcsbGroupMembers/RcsbGroupMembersComponent.js +2 -2
- package/lib/commonjs/RcsbGroupWeb/RcsbGroupView/RcsbGroupSeacrhQuery/RcsbGroupSeacrhQueryComponent.d.ts +2 -2
- package/lib/commonjs/RcsbGroupWeb/RcsbGroupView/RcsbGroupSeacrhQuery/SearchQueryContextManager.d.ts +3 -3
- package/lib/commonjs/RcsbGroupWeb/RcsbGroupView/RcsbResidueChart/ResidueChartTools/ResidueChartTools.js +1 -1
- package/lib/commonjs/RcsbQueries/QueryCheck.js +1 -1
- package/lib/commonjs/RcsbRequest/RcsbRequestClient.d.ts +2 -2
- package/lib/commonjs/RcsbRequest/RcsbRequestClient.js +2 -2
- package/lib/commonjs/RcsbRequest/RcsbRequestContextManager.d.ts +5 -5
- package/lib/commonjs/RcsbRequest/RcsbRequestContextManager.js +3 -3
- package/lib/commonjs/RcsbSeacrh/FacetStore/DepositionGroupFacetStore.d.ts +1 -1
- package/lib/commonjs/RcsbSeacrh/FacetStore/DepositionGroupFacetStore.js +2 -2
- package/lib/commonjs/RcsbSeacrh/FacetStore/EntityGranularitySearchFacetStore.d.ts +1 -1
- package/lib/commonjs/RcsbSeacrh/FacetStore/EntityGranularitySearchFacetStore.js +2 -2
- package/lib/commonjs/RcsbSeacrh/FacetStore/FacetMemberInterface.d.ts +1 -1
- package/lib/commonjs/RcsbSeacrh/FacetStore/FacetStoreInterface.d.ts +1 -1
- package/lib/commonjs/RcsbSeacrh/FacetStore/SequenceGroupFacetStore.d.ts +1 -1
- package/lib/commonjs/RcsbSeacrh/FacetStore/SequenceGroupFacetStore.js +2 -2
- package/lib/commonjs/RcsbSeacrh/FacetStore/SingleFacets.js +2 -2
- package/lib/commonjs/RcsbSeacrh/FacetStore/UniprotGroupFacetStore.d.ts +1 -1
- package/lib/commonjs/RcsbSeacrh/FacetStore/UniprotGroupFacetStore.js +2 -2
- package/lib/commonjs/RcsbSeacrh/FacetTools.d.ts +4 -4
- package/lib/commonjs/RcsbSeacrh/SearchQueryTools.d.ts +5 -5
- package/lib/commonjs/RcsbSeacrh/SearchQueryTools.js +3 -3
- package/lib/commonjs/RcsbSeacrh/SearchRequestProperty.d.ts +4 -4
- package/lib/commonjs/RcsbUtils/Groups/GroupGapLessTransformer.d.ts +1 -1
- package/lib/commonjs/RcsbUtils/Groups/GroupProvenanceToAggregationType.d.ts +2 -2
- package/lib/commonjs/RcsbUtils/Groups/GroupProvenanceToAggregationType.js +3 -2
- package/lib/commonjs/RcsbUtils/PairwiseAlignmentTools/AlignmentReference.d.ts +1 -1
- package/lib/commonjs/RcsbUtils/PairwiseAlignmentTools/PairwiseAlignmentBuilder.js +1 -1
- package/lib/commonjs/RcsbUtils/TrackGenerators/BurialFraction.d.ts +1 -1
- package/lib/commonjs/RcsbUtils/TrackGenerators/BurialFraction.js +1 -1
- package/lib/commonjs/RcsbUtils/TrackGenerators/BuriedResidues.d.ts +1 -1
- package/lib/commonjs/RcsbUtils/TrackGenerators/BuriedResidues.js +1 -1
- package/lib/commonjs/RcsbUtils/TrackGenerators/Logo.d.ts +1 -1
- package/lib/commonjs/RcsbUtils/TrackGenerators/UnmodeledTrackBuilder.d.ts +1 -1
- package/lib/commonjs/RcsbUtils/TrackGenerators/UnmodeledTrackBuilder.js +1 -1
- package/lib/commonjs/RcsbUtils/Translators/MultipleEntityInstanceTranslate.js +1 -1
- package/lib/commonjs/RcsbUtils/Translators/PolymerEntityInstanceTranslate.d.ts +1 -1
- package/lib/commonjs/RcsbUtils/Translators/PolymerEntityInstanceTranslate.js +2 -2
- package/package.json +3 -3
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
import { RcsbFvLink } from "@rcsb/rcsb-saguaro/lib/RcsbFv/RcsbFvConfig/RcsbFvConfigInterface";
|
|
2
2
|
import { TrackTitleFactoryInterface } from "../TrackTitleFactoryInterface";
|
|
3
|
-
import { TargetAlignments } from "@rcsb/rcsb-api-tools/
|
|
3
|
+
import { TargetAlignments } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
|
|
4
4
|
import { AlignmentRequestContextType } from "../TrackFactoryImpl/AlignmentTrackFactory";
|
|
5
5
|
import { PolymerEntityInstanceTranslate } from "../../../../RcsbUtils/Translators/PolymerEntityInstanceTranslate";
|
|
6
6
|
export declare class ExperimentalAlignmentTrackTitleFactory implements TrackTitleFactoryInterface<[AlignmentRequestContextType, TargetAlignments]> {
|
|
@@ -2,12 +2,12 @@
|
|
|
2
2
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
3
3
|
exports.ExperimentalAlignmentTrackTitleFactory = void 0;
|
|
4
4
|
const tslib_1 = require("tslib");
|
|
5
|
-
const GqlTypes_1 = require("@rcsb/rcsb-api-tools/
|
|
5
|
+
const GqlTypes_1 = require("@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes");
|
|
6
6
|
const web_resources_json_1 = tslib_1.__importDefault(require("../../../../RcsbServerConfig/web.resources.json"));
|
|
7
7
|
const RcsbAnnotationConstants_1 = require("../../../../RcsbAnnotationConfig/RcsbAnnotationConstants");
|
|
8
8
|
const Assertions_1 = require("../../../../RcsbUtils/Helpers/Assertions");
|
|
9
9
|
var assertDefined = Assertions_1.Assertions.assertDefined;
|
|
10
|
-
const TagDelimiter_1 = require("@rcsb/rcsb-api-tools/
|
|
10
|
+
const TagDelimiter_1 = require("@rcsb/rcsb-api-tools/lib/RcsbUtils/TagDelimiter");
|
|
11
11
|
class ExperimentalAlignmentTrackTitleFactory {
|
|
12
12
|
constructor(entityInstanceTranslator) {
|
|
13
13
|
this.entityInstanceTranslator = undefined;
|
|
@@ -1,7 +1,7 @@
|
|
|
1
1
|
import { RcsbFvLink } from "@rcsb/rcsb-saguaro/lib/RcsbFv/RcsbFvConfig/RcsbFvConfigInterface";
|
|
2
2
|
import { TrackTitleFactoryInterface } from "../TrackTitleFactoryInterface";
|
|
3
3
|
import { AlignmentRequestContextType } from "../TrackFactoryImpl/AlignmentTrackFactory";
|
|
4
|
-
import { TargetAlignments } from "@rcsb/rcsb-api-tools/
|
|
4
|
+
import { TargetAlignments } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
|
|
5
5
|
import { PolymerEntityInstanceTranslate } from "../../../../RcsbUtils/Translators/PolymerEntityInstanceTranslate";
|
|
6
6
|
export declare class ModelAlignmentTrackTitleFactory implements TrackTitleFactoryInterface<[AlignmentRequestContextType, TargetAlignments]> {
|
|
7
7
|
private readonly alignmentTrackTitleFactory;
|
|
@@ -2,13 +2,13 @@
|
|
|
2
2
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
3
3
|
exports.SequenceTrackTitleFactory = void 0;
|
|
4
4
|
const tslib_1 = require("tslib");
|
|
5
|
-
const GqlTypes_1 = require("@rcsb/rcsb-api-tools/
|
|
5
|
+
const GqlTypes_1 = require("@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes");
|
|
6
6
|
const web_resources_json_1 = tslib_1.__importDefault(require("../../../../RcsbServerConfig/web.resources.json"));
|
|
7
7
|
const RcsbAnnotationConstants_1 = require("../../../../RcsbAnnotationConfig/RcsbAnnotationConstants");
|
|
8
8
|
const TrackUtils_1 = require("../TrackFactoryImpl/Helper/TrackUtils");
|
|
9
9
|
const Assertions_1 = require("../../../../RcsbUtils/Helpers/Assertions");
|
|
10
10
|
var assertDefined = Assertions_1.Assertions.assertDefined;
|
|
11
|
-
const TagDelimiter_1 = require("@rcsb/rcsb-api-tools/
|
|
11
|
+
const TagDelimiter_1 = require("@rcsb/rcsb-api-tools/lib/RcsbUtils/TagDelimiter");
|
|
12
12
|
class SequenceTrackTitleFactory {
|
|
13
13
|
constructor(entityInstanceTranslator) {
|
|
14
14
|
this.entityInstanceTranslator = undefined;
|
|
@@ -1,7 +1,7 @@
|
|
|
1
1
|
import React, { ReactNode } from "react";
|
|
2
2
|
import { RcsbFvAdditionalConfig } from "../RcsbFvModule/RcsbFvModuleInterface";
|
|
3
|
-
import { SearchQuery } from "@rcsb/rcsb-api-tools/
|
|
4
|
-
import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/
|
|
3
|
+
import { SearchQuery } from "@rcsb/rcsb-api-tools/lib/RcsbSearch/Types/SearchQueryInterface";
|
|
4
|
+
import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/lib/RcsbDw/Types/DwEnums";
|
|
5
5
|
interface SequenceTabInterface {
|
|
6
6
|
groupProvenanceId: GroupProvenanceId;
|
|
7
7
|
groupId: string;
|
|
@@ -4,11 +4,11 @@ exports.GroupPfvTabs = void 0;
|
|
|
4
4
|
const tslib_1 = require("tslib");
|
|
5
5
|
const jsx_runtime_1 = require("react/jsx-runtime");
|
|
6
6
|
const react_1 = tslib_1.__importDefault(require("react"));
|
|
7
|
-
const GqlTypes_1 = require("@rcsb/rcsb-api-tools/
|
|
7
|
+
const GqlTypes_1 = require("@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes");
|
|
8
8
|
const SearchRequestProperty_1 = require("../../RcsbSeacrh/SearchRequestProperty");
|
|
9
|
-
const SearchEnums_1 = require("@rcsb/rcsb-api-tools/
|
|
9
|
+
const SearchEnums_1 = require("@rcsb/rcsb-api-tools/lib/RcsbSearch/Types/SearchEnums");
|
|
10
10
|
const RcsbTabs_1 = require("../RcsbFvComponents/RcsbTabs");
|
|
11
|
-
const DwEnums_1 = require("@rcsb/rcsb-api-tools/
|
|
11
|
+
const DwEnums_1 = require("@rcsb/rcsb-api-tools/lib/RcsbDw/Types/DwEnums");
|
|
12
12
|
const SearchQueryTools_1 = require("../../RcsbSeacrh/SearchQueryTools");
|
|
13
13
|
const GroupPfvApp_1 = require("./GroupTabs/GroupPfvApp");
|
|
14
14
|
const rxjs_1 = require("rxjs");
|
|
@@ -1,10 +1,10 @@
|
|
|
1
1
|
import { RcsbFvAdditionalConfig, RcsbFvModulePublicInterface } from "../../RcsbFvModule/RcsbFvModuleInterface";
|
|
2
|
-
import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/
|
|
3
|
-
import { GroupReference } from "@rcsb/rcsb-api-tools/
|
|
2
|
+
import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/lib/RcsbDw/Types/DwEnums";
|
|
3
|
+
import { GroupReference } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
|
|
4
4
|
import { ActionMethods } from "../../../RcsbFvUI/Helper/ActionMethods";
|
|
5
5
|
export declare namespace GroupPfvApp {
|
|
6
6
|
function alignment(elementId: string, groupProvenanceId: GroupProvenanceId, groupId: string, entityCount: number, additionalConfig?: RcsbFvAdditionalConfig & ActionMethods.FvChangeConfigInterface): Promise<RcsbFvModulePublicInterface>;
|
|
7
7
|
function structure(elementId: string, groupProvenanceId: GroupProvenanceId, groupId: string, nTargets: number, additionalConfig?: RcsbFvAdditionalConfig): Promise<RcsbFvModulePublicInterface>;
|
|
8
8
|
function bindingSites(elementId: string, groupProvenanceId: GroupProvenanceId, groupId: string, nTargets: number, additionalConfig?: RcsbFvAdditionalConfig): Promise<RcsbFvModulePublicInterface>;
|
|
9
9
|
}
|
|
10
|
-
export declare function getReferenceFromGroupProvenance(groupProvenanceId: GroupProvenanceId): GroupReference;
|
|
10
|
+
export declare function getReferenceFromGroupProvenance(groupProvenanceId: GroupProvenanceId): GroupReference | undefined;
|
|
@@ -3,11 +3,11 @@ Object.defineProperty(exports, "__esModule", { value: true });
|
|
|
3
3
|
exports.GroupPfvApp = void 0;
|
|
4
4
|
exports.getReferenceFromGroupProvenance = getReferenceFromGroupProvenance;
|
|
5
5
|
const tslib_1 = require("tslib");
|
|
6
|
-
const DwEnums_1 = require("@rcsb/rcsb-api-tools/
|
|
6
|
+
const DwEnums_1 = require("@rcsb/rcsb-api-tools/lib/RcsbDw/Types/DwEnums");
|
|
7
7
|
const RcsbFvUniprotBuilder_1 = require("../../RcsbFvBuilder/RcsbFvUniprotBuilder");
|
|
8
8
|
const GroupExternalTrackBuilder_1 = require("../../../RcsbUtils/TrackGenerators/GroupExternalTrackBuilder");
|
|
9
9
|
const RcsbFvGroupBuilder_1 = require("../../RcsbFvBuilder/RcsbFvGroupBuilder");
|
|
10
|
-
const GqlTypes_1 = require("@rcsb/rcsb-api-tools/
|
|
10
|
+
const GqlTypes_1 = require("@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes");
|
|
11
11
|
const AlignmentGlobalBindingSite_1 = require("../../../RcsbUtils/TrackGenerators/AlignmentGlobalBindingSite");
|
|
12
12
|
const RcsbTabs_1 = require("../../RcsbFvComponents/RcsbTabs");
|
|
13
13
|
const GroupPfvUI_1 = require("../../../RcsbFvUI/GroupPfvUI");
|
|
@@ -1,5 +1,5 @@
|
|
|
1
|
-
import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/
|
|
2
|
-
import { SearchQuery } from "@rcsb/rcsb-api-tools/
|
|
1
|
+
import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/lib/RcsbDw/Types/DwEnums";
|
|
2
|
+
import { SearchQuery } from "@rcsb/rcsb-api-tools/lib/RcsbSearch/Types/SearchQueryInterface";
|
|
3
3
|
import { RcsbFvAdditionalConfig } from "../RcsbFvModule/RcsbFvModuleInterface";
|
|
4
4
|
export declare class RcsbFvGroupTabsBuilder {
|
|
5
5
|
static buildGroupTabs(elementId: string, groupProvenanceId: GroupProvenanceId, groupId: string, query?: SearchQuery, additionalConfig?: RcsbFvAdditionalConfig): void;
|
|
@@ -4,7 +4,7 @@ import { PolymerEntityInstanceTranslate } from "../../RcsbUtils/Translators/Poly
|
|
|
4
4
|
import { AlignmentCollectorInterface } from "../../RcsbCollectTools/AlignmentCollector/AlignmentCollectorInterface";
|
|
5
5
|
import { AnnotationRequestContext, AnnotationCollectorInterface } from "../../RcsbCollectTools/AnnotationCollector/AnnotationCollectorInterface";
|
|
6
6
|
import { RcsbFvModuleBuildInterface, RcsbFvModuleInterface } from "./RcsbFvModuleInterface";
|
|
7
|
-
import { SequenceAlignments, SequenceAnnotations, Features, TargetAlignments } from "@rcsb/rcsb-api-tools/
|
|
7
|
+
import { SequenceAlignments, SequenceAnnotations, Features, TargetAlignments } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
|
|
8
8
|
import { TrackFactoryInterface } from "../RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryInterface";
|
|
9
9
|
import { AlignmentRequestContextType } from "../RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/AlignmentTrackFactory";
|
|
10
10
|
import { AnnotationConfigInterface } from "../../RcsbAnnotationConfig/AnnotationConfigInterface";
|
|
@@ -5,7 +5,7 @@ const tslib_1 = require("tslib");
|
|
|
5
5
|
const rxjs_1 = require("rxjs");
|
|
6
6
|
const RcsbDataManager_1 = require("@rcsb/rcsb-saguaro/lib/RcsbDataManager/RcsbDataManager");
|
|
7
7
|
const RcsbFvAbstractModule_1 = require("./RcsbFvAbstractModule");
|
|
8
|
-
const GqlTypes_1 = require("@rcsb/rcsb-api-tools/
|
|
8
|
+
const GqlTypes_1 = require("@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes");
|
|
9
9
|
const RcsbAnnotationConstants_1 = require("../../RcsbAnnotationConfig/RcsbAnnotationConstants");
|
|
10
10
|
const RcsbFvAlignmentCollectorQueue_1 = require("../RcsbFvWorkers/RcsbFvAlignmentCollectorQueue");
|
|
11
11
|
const NcbiGenomeSequenceData_1 = require("../../ExternalResources/NcbiData/NcbiGenomeSequenceData");
|
|
@@ -2,11 +2,11 @@
|
|
|
2
2
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
3
3
|
exports.RcsbFvEntity = void 0;
|
|
4
4
|
const tslib_1 = require("tslib");
|
|
5
|
-
const GqlTypes_1 = require("@rcsb/rcsb-api-tools/
|
|
5
|
+
const GqlTypes_1 = require("@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes");
|
|
6
6
|
const RcsbFvAbstractModule_1 = require("./RcsbFvAbstractModule");
|
|
7
7
|
const Assertions_1 = require("../../RcsbUtils/Helpers/Assertions");
|
|
8
8
|
var assertDefined = Assertions_1.Assertions.assertDefined;
|
|
9
|
-
const TagDelimiter_1 = require("@rcsb/rcsb-api-tools/
|
|
9
|
+
const TagDelimiter_1 = require("@rcsb/rcsb-api-tools/lib/RcsbUtils/TagDelimiter");
|
|
10
10
|
const UnmodeledTrackBuilder_1 = require("../../RcsbUtils/TrackGenerators/UnmodeledTrackBuilder");
|
|
11
11
|
class RcsbFvEntity extends RcsbFvAbstractModule_1.RcsbFvAbstractModule {
|
|
12
12
|
constructor() {
|
|
@@ -3,7 +3,7 @@ Object.defineProperty(exports, "__esModule", { value: true });
|
|
|
3
3
|
exports.RcsbFvGroupAlignment = void 0;
|
|
4
4
|
const tslib_1 = require("tslib");
|
|
5
5
|
const RcsbFvAbstractModule_1 = require("./RcsbFvAbstractModule");
|
|
6
|
-
const GqlTypes_1 = require("@rcsb/rcsb-api-tools/
|
|
6
|
+
const GqlTypes_1 = require("@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes");
|
|
7
7
|
const MsaAlignmentTrackFactory_1 = require("../RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/MsaAlignmentTrackFactory");
|
|
8
8
|
const Assertions_1 = require("../../RcsbUtils/Helpers/Assertions");
|
|
9
9
|
var assertDefined = Assertions_1.Assertions.assertDefined;
|
|
@@ -2,7 +2,7 @@
|
|
|
2
2
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
3
3
|
exports.RcsbFvInstance = void 0;
|
|
4
4
|
const tslib_1 = require("tslib");
|
|
5
|
-
const GqlTypes_1 = require("@rcsb/rcsb-api-tools/
|
|
5
|
+
const GqlTypes_1 = require("@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes");
|
|
6
6
|
const RcsbFvAbstractModule_1 = require("./RcsbFvAbstractModule");
|
|
7
7
|
const BuriedResidues_1 = require("../../RcsbUtils/TrackGenerators/BuriedResidues");
|
|
8
8
|
const SequenceTrackFactory_1 = require("../RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/SequenceTrackFactory");
|
|
@@ -1,4 +1,4 @@
|
|
|
1
|
-
import { SequenceAnnotations } from "@rcsb/rcsb-api-tools/
|
|
1
|
+
import { SequenceAnnotations } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
|
|
2
2
|
import { RcsbFvAbstractModule } from "./RcsbFvAbstractModule";
|
|
3
3
|
export declare class RcsbFvInterface extends RcsbFvAbstractModule {
|
|
4
4
|
private instanceId;
|
|
@@ -4,7 +4,7 @@ exports.RcsbFvInterface = void 0;
|
|
|
4
4
|
exports.interfaceAnnotations = interfaceAnnotations;
|
|
5
5
|
exports.filter = filter;
|
|
6
6
|
const tslib_1 = require("tslib");
|
|
7
|
-
const GqlTypes_1 = require("@rcsb/rcsb-api-tools/
|
|
7
|
+
const GqlTypes_1 = require("@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes");
|
|
8
8
|
const RcsbFvAbstractModule_1 = require("./RcsbFvAbstractModule");
|
|
9
9
|
const acm = tslib_1.__importStar(require("../../RcsbAnnotationConfig/RcsbAnnotationConfig.ac.json"));
|
|
10
10
|
const BuriedResidues_1 = require("../../RcsbUtils/TrackGenerators/BuriedResidues");
|
|
@@ -15,7 +15,7 @@ const SequenceTrackFactory_1 = require("../RcsbFvFactories/RcsbFvTrackFactory/Tr
|
|
|
15
15
|
const InstanceSequenceTrackTitleFactory_1 = require("../RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/InstanceSequenceTrackTitleFactory");
|
|
16
16
|
const Assertions_1 = require("../../RcsbUtils/Helpers/Assertions");
|
|
17
17
|
var assertDefined = Assertions_1.Assertions.assertDefined;
|
|
18
|
-
const TagDelimiter_1 = require("@rcsb/rcsb-api-tools/
|
|
18
|
+
const TagDelimiter_1 = require("@rcsb/rcsb-api-tools/lib/RcsbUtils/TagDelimiter");
|
|
19
19
|
const annotationConfigMap = acm;
|
|
20
20
|
class RcsbFvInterface extends RcsbFvAbstractModule_1.RcsbFvAbstractModule {
|
|
21
21
|
protectedBuild() {
|
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
import { RcsbFvBoardConfigInterface, RcsbFvRowConfigInterface } from "@rcsb/rcsb-saguaro/lib/RcsbFv/RcsbFvConfig/RcsbFvConfigInterface";
|
|
2
2
|
import { RcsbFv } from "@rcsb/rcsb-saguaro/lib/RcsbFv/RcsbFv";
|
|
3
|
-
import { SequenceAlignments, Features, AnnotationFilterInput, GroupReference, SequenceReference, AnnotationReference, TargetAlignments } from "@rcsb/rcsb-api-tools/
|
|
3
|
+
import { SequenceAlignments, Features, AnnotationFilterInput, GroupReference, SequenceReference, AnnotationReference, TargetAlignments } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
|
|
4
4
|
import { PolymerEntityInstanceTranslate } from "../../RcsbUtils/Translators/PolymerEntityInstanceTranslate";
|
|
5
5
|
import { AnnotationCollectorInterface, AnnotationProcessingInterface, AnnotationsCollectConfig } from "../../RcsbCollectTools/AnnotationCollector/AnnotationCollectorInterface";
|
|
6
6
|
import { ExternalTrackBuilderInterface } from "../../RcsbCollectTools/FeatureTools/ExternalTrackBuilderInterface";
|
|
@@ -2,7 +2,7 @@
|
|
|
2
2
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
3
3
|
exports.RcsbFvProteinSequence = void 0;
|
|
4
4
|
const tslib_1 = require("tslib");
|
|
5
|
-
const GqlTypes_1 = require("@rcsb/rcsb-api-tools/
|
|
5
|
+
const GqlTypes_1 = require("@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes");
|
|
6
6
|
const RcsbFvAbstractModule_1 = require("./RcsbFvAbstractModule");
|
|
7
7
|
const Assertions_1 = require("../../RcsbUtils/Helpers/Assertions");
|
|
8
8
|
var assertDefined = Assertions_1.Assertions.assertDefined;
|
|
@@ -2,7 +2,7 @@
|
|
|
2
2
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
3
3
|
exports.RcsbFvUniprot = void 0;
|
|
4
4
|
const tslib_1 = require("tslib");
|
|
5
|
-
const GqlTypes_1 = require("@rcsb/rcsb-api-tools/
|
|
5
|
+
const GqlTypes_1 = require("@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes");
|
|
6
6
|
const RcsbFvAbstractModule_1 = require("./RcsbFvAbstractModule");
|
|
7
7
|
const RcsbClient_1 = require("../../RcsbGraphQL/RcsbClient");
|
|
8
8
|
const MsaAlignmentTrackFactory_1 = require("../RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/MsaAlignmentTrackFactory");
|
|
@@ -2,7 +2,7 @@
|
|
|
2
2
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
3
3
|
exports.RcsbFvUniprotAlignment = void 0;
|
|
4
4
|
const tslib_1 = require("tslib");
|
|
5
|
-
const GqlTypes_1 = require("@rcsb/rcsb-api-tools/
|
|
5
|
+
const GqlTypes_1 = require("@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes");
|
|
6
6
|
const RcsbFvAbstractModule_1 = require("./RcsbFvAbstractModule");
|
|
7
7
|
const RcsbClient_1 = require("../../RcsbGraphQL/RcsbClient");
|
|
8
8
|
const MsaAlignmentTrackFactory_1 = require("../RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/MsaAlignmentTrackFactory");
|
|
@@ -2,11 +2,11 @@
|
|
|
2
2
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
3
3
|
exports.RcsbFvUniprotEntity = void 0;
|
|
4
4
|
const tslib_1 = require("tslib");
|
|
5
|
-
const GqlTypes_1 = require("@rcsb/rcsb-api-tools/
|
|
5
|
+
const GqlTypes_1 = require("@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes");
|
|
6
6
|
const RcsbFvAbstractModule_1 = require("./RcsbFvAbstractModule");
|
|
7
7
|
const Assertions_1 = require("../../RcsbUtils/Helpers/Assertions");
|
|
8
8
|
var assertDefined = Assertions_1.Assertions.assertDefined;
|
|
9
|
-
const TagDelimiter_1 = require("@rcsb/rcsb-api-tools/
|
|
9
|
+
const TagDelimiter_1 = require("@rcsb/rcsb-api-tools/lib/RcsbUtils/TagDelimiter");
|
|
10
10
|
const UnmodeledTrackBuilder_1 = require("../../RcsbUtils/TrackGenerators/UnmodeledTrackBuilder");
|
|
11
11
|
class RcsbFvUniprotEntity extends RcsbFvAbstractModule_1.RcsbFvAbstractModule {
|
|
12
12
|
constructor() {
|
|
@@ -2,7 +2,7 @@
|
|
|
2
2
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
3
3
|
exports.RcsbFvUniprotInstance = void 0;
|
|
4
4
|
const tslib_1 = require("tslib");
|
|
5
|
-
const GqlTypes_1 = require("@rcsb/rcsb-api-tools/
|
|
5
|
+
const GqlTypes_1 = require("@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes");
|
|
6
6
|
const RcsbFvAbstractModule_1 = require("./RcsbFvAbstractModule");
|
|
7
7
|
const BuriedResidues_1 = require("../../RcsbUtils/TrackGenerators/BuriedResidues");
|
|
8
8
|
const Assertions_1 = require("../../RcsbUtils/Helpers/Assertions");
|
|
@@ -1,4 +1,4 @@
|
|
|
1
|
-
import { QueryAlignmentsArgs } from "@rcsb/rcsb-api-tools/
|
|
1
|
+
import { QueryAlignmentsArgs } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
|
|
2
2
|
export declare class RcsbFvAlignmentCollectorQueue {
|
|
3
3
|
private readonly nWorkers;
|
|
4
4
|
private readonly workerList;
|
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
import { RcsbQueryGroupAlignmentArguments } from "./RcsbQueryAlignment";
|
|
2
|
-
import { SequenceAlignments, SequenceAnnotations, QueryAlignmentsArgs, QueryAnnotationsArgs, QueryGroup_AnnotationsArgs } from "@rcsb/rcsb-api-tools/
|
|
3
|
-
import { CoreAssembly, CoreEntry, CoreInterface, CorePolymerEntity, QueryAssembliesArgs, GroupPolymerEntity, QueryEntriesArgs, QueryEntryArgs, QueryInterfacesArgs, QueryPolymer_EntitiesArgs, QueryPolymer_Entity_GroupArgs, QueryPolymer_Entity_InstancesArgs, CorePolymerEntityInstance } from "@rcsb/rcsb-api-tools/
|
|
2
|
+
import { SequenceAlignments, SequenceAnnotations, QueryAlignmentsArgs, QueryAnnotationsArgs, QueryGroup_AnnotationsArgs } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
|
|
3
|
+
import { CoreAssembly, CoreEntry, CoreInterface, CorePolymerEntity, QueryAssembliesArgs, GroupPolymerEntity, QueryEntriesArgs, QueryEntryArgs, QueryInterfacesArgs, QueryPolymer_EntitiesArgs, QueryPolymer_Entity_GroupArgs, QueryPolymer_Entity_InstancesArgs, CorePolymerEntityInstance } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Yosemite/GqlTypes";
|
|
4
4
|
import { GraphQLRequest } from "@rcsb/rcsb-api-tools";
|
|
5
5
|
declare class RcsbClientClass {
|
|
6
6
|
private readonly rcsbQueryAnnotations;
|
|
@@ -1,4 +1,4 @@
|
|
|
1
|
-
import { GraphQLRequest } from "@rcsb/rcsb-api-tools/
|
|
1
|
+
import { GraphQLRequest } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/GraphQLRequest";
|
|
2
2
|
export interface RcsbCoreQueryInterface<Q, R> {
|
|
3
3
|
readonly getClient: () => GraphQLRequest;
|
|
4
4
|
request(requestConfig: Q): Promise<R>;
|
|
@@ -1,6 +1,6 @@
|
|
|
1
|
-
import { SequenceAlignments, QueryAlignmentsArgs, QueryGroup_AlignmentsArgs } from "@rcsb/rcsb-api-tools/
|
|
1
|
+
import { SequenceAlignments, QueryAlignmentsArgs, QueryGroup_AlignmentsArgs } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
|
|
2
2
|
import { RcsbCoreQueryInterface } from "./RcsbCoreQueryInterface";
|
|
3
|
-
import { GraphQLRequest } from "@rcsb/rcsb-api-tools/
|
|
3
|
+
import { GraphQLRequest } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/GraphQLRequest";
|
|
4
4
|
export declare class RcsbQueryAlignment implements RcsbCoreQueryInterface<QueryAlignmentsArgs, SequenceAlignments> {
|
|
5
5
|
readonly getClient: () => GraphQLRequest;
|
|
6
6
|
constructor(getClient: () => GraphQLRequest);
|
|
@@ -1,6 +1,6 @@
|
|
|
1
|
-
import { SequenceAnnotations, QueryAnnotationsArgs, QueryGroup_AnnotationsArgs } from "@rcsb/rcsb-api-tools/
|
|
1
|
+
import { SequenceAnnotations, QueryAnnotationsArgs, QueryGroup_AnnotationsArgs } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Borrego/GqlTypes";
|
|
2
2
|
import { RcsbCoreQueryInterface } from "./RcsbCoreQueryInterface";
|
|
3
|
-
import { GraphQLRequest } from "@rcsb/rcsb-api-tools/
|
|
3
|
+
import { GraphQLRequest } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/GraphQLRequest";
|
|
4
4
|
export declare class RcsbQueryAnnotations implements RcsbCoreQueryInterface<QueryAnnotationsArgs, Array<SequenceAnnotations>> {
|
|
5
5
|
readonly getClient: () => GraphQLRequest;
|
|
6
6
|
constructor(getClient: () => GraphQLRequest);
|
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
import { RcsbCoreQueryInterface } from "./RcsbCoreQueryInterface";
|
|
2
|
-
import { CoreAssembly, QueryAssembliesArgs } from "@rcsb/rcsb-api-tools/
|
|
3
|
-
import { GraphQLRequest } from "@rcsb/rcsb-api-tools/
|
|
2
|
+
import { CoreAssembly, QueryAssembliesArgs } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Yosemite/GqlTypes";
|
|
3
|
+
import { GraphQLRequest } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/GraphQLRequest";
|
|
4
4
|
export declare class RcsbQueryAssemblyInterfaces implements RcsbCoreQueryInterface<QueryAssembliesArgs, Array<CoreAssembly>> {
|
|
5
5
|
readonly getClient: () => GraphQLRequest;
|
|
6
6
|
constructor(getClient: () => GraphQLRequest);
|
|
@@ -1,6 +1,6 @@
|
|
|
1
|
-
import { CoreEntry, QueryEntryArgs } from "@rcsb/rcsb-api-tools/
|
|
1
|
+
import { CoreEntry, QueryEntryArgs } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Yosemite/GqlTypes";
|
|
2
2
|
import { RcsbCoreQueryInterface } from "./RcsbCoreQueryInterface";
|
|
3
|
-
import { GraphQLRequest } from "@rcsb/rcsb-api-tools/
|
|
3
|
+
import { GraphQLRequest } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/GraphQLRequest";
|
|
4
4
|
export declare class RcsbQueryEntryInstances implements RcsbCoreQueryInterface<QueryEntryArgs, CoreEntry> {
|
|
5
5
|
readonly getClient: () => GraphQLRequest;
|
|
6
6
|
constructor(getClient: () => GraphQLRequest);
|
|
@@ -1,6 +1,6 @@
|
|
|
1
|
-
import { GroupPolymerEntity, QueryPolymer_Entity_GroupArgs } from "@rcsb/rcsb-api-tools/
|
|
1
|
+
import { GroupPolymerEntity, QueryPolymer_Entity_GroupArgs } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Yosemite/GqlTypes";
|
|
2
2
|
import { RcsbCoreQueryInterface } from "./RcsbCoreQueryInterface";
|
|
3
|
-
import { GraphQLRequest } from "@rcsb/rcsb-api-tools/
|
|
3
|
+
import { GraphQLRequest } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/GraphQLRequest";
|
|
4
4
|
export declare class RcsbQueryGroup implements RcsbCoreQueryInterface<QueryPolymer_Entity_GroupArgs, GroupPolymerEntity> {
|
|
5
5
|
readonly getClient: () => GraphQLRequest;
|
|
6
6
|
constructor(getClient: () => GraphQLRequest);
|
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
import { RcsbCoreQueryInterface } from "./RcsbCoreQueryInterface";
|
|
2
|
-
import { CoreInterface, QueryInterfacesArgs } from "@rcsb/rcsb-api-tools/
|
|
3
|
-
import { GraphQLRequest } from "@rcsb/rcsb-api-tools/
|
|
2
|
+
import { CoreInterface, QueryInterfacesArgs } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Yosemite/GqlTypes";
|
|
3
|
+
import { GraphQLRequest } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/GraphQLRequest";
|
|
4
4
|
export declare class RcsbQueryInterfaceInstances implements RcsbCoreQueryInterface<QueryInterfacesArgs, Array<CoreInterface>> {
|
|
5
5
|
readonly getClient: () => GraphQLRequest;
|
|
6
6
|
constructor(getClient: () => GraphQLRequest);
|
|
@@ -1,6 +1,6 @@
|
|
|
1
|
-
import { CorePolymerEntity, QueryPolymer_EntitiesArgs } from "@rcsb/rcsb-api-tools/
|
|
1
|
+
import { CorePolymerEntity, QueryPolymer_EntitiesArgs } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Yosemite/GqlTypes";
|
|
2
2
|
import { RcsbCoreQueryInterface } from "./RcsbCoreQueryInterface";
|
|
3
|
-
import { GraphQLRequest } from "@rcsb/rcsb-api-tools/
|
|
3
|
+
import { GraphQLRequest } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/GraphQLRequest";
|
|
4
4
|
export declare class RcsbQueryMultipleEntityInstances implements RcsbCoreQueryInterface<QueryPolymer_EntitiesArgs, Array<CorePolymerEntity>> {
|
|
5
5
|
readonly getClient: () => GraphQLRequest;
|
|
6
6
|
constructor(getClient: () => GraphQLRequest);
|
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
import { RcsbCoreQueryInterface } from "./RcsbCoreQueryInterface";
|
|
2
|
-
import { CoreEntry, QueryEntriesArgs } from "@rcsb/rcsb-api-tools/
|
|
3
|
-
import { GraphQLRequest } from "@rcsb/rcsb-api-tools/
|
|
2
|
+
import { CoreEntry, QueryEntriesArgs } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Yosemite/GqlTypes";
|
|
3
|
+
import { GraphQLRequest } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/GraphQLRequest";
|
|
4
4
|
export declare class RcsbQueryMultipleEntriesProperties implements RcsbCoreQueryInterface<QueryEntriesArgs, Array<CoreEntry>> {
|
|
5
5
|
readonly getClient: () => GraphQLRequest;
|
|
6
6
|
constructor(getClient: () => GraphQLRequest);
|
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
import { RcsbCoreQueryInterface } from "./RcsbCoreQueryInterface";
|
|
2
|
-
import { CorePolymerEntityInstance, QueryPolymer_Entity_InstancesArgs } from "@rcsb/rcsb-api-tools/
|
|
3
|
-
import { GraphQLRequest } from "@rcsb/rcsb-api-tools/
|
|
2
|
+
import { CorePolymerEntityInstance, QueryPolymer_Entity_InstancesArgs } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/Types/Yosemite/GqlTypes";
|
|
3
|
+
import { GraphQLRequest } from "@rcsb/rcsb-api-tools/lib/RcsbGraphQL/GraphQLRequest";
|
|
4
4
|
export declare class RcsbQueryMultipleInstanceSequences implements RcsbCoreQueryInterface<QueryPolymer_Entity_InstancesArgs, CorePolymerEntityInstance[]> {
|
|
5
5
|
readonly getClient: () => GraphQLRequest;
|
|
6
6
|
constructor(getClient: () => GraphQLRequest);
|
|
@@ -1,6 +1,6 @@
|
|
|
1
|
-
import { SearchQuery } from "@rcsb/rcsb-api-tools/
|
|
2
|
-
import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/
|
|
3
|
-
import { ReturnType } from "@rcsb/rcsb-api-tools/
|
|
1
|
+
import { SearchQuery } from "@rcsb/rcsb-api-tools/lib/RcsbSearch/Types/SearchQueryInterface";
|
|
2
|
+
import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/lib/RcsbDw/Types/DwEnums";
|
|
3
|
+
import { ReturnType } from "@rcsb/rcsb-api-tools/lib/RcsbSearch/Types/SearchEnums";
|
|
4
4
|
import { GroupChartAdditionalProperties } from "./RcsbGroupView/RcsbGroupChart/GroupChartAdditionalProperties";
|
|
5
5
|
import { SearchQueryContextManagerSubjectInterface } from "./RcsbGroupView/RcsbGroupSeacrhQuery/SearchQueryContextManager";
|
|
6
6
|
import { Subscription } from "rxjs";
|
|
@@ -1,5 +1,5 @@
|
|
|
1
1
|
import { RcsbChartInterface } from "../../../RcsbSeacrh/FacetTools";
|
|
2
|
-
import { ReturnType } from "@rcsb/rcsb-api-tools/
|
|
2
|
+
import { ReturnType } from "@rcsb/rcsb-api-tools/lib/RcsbSearch/Types/SearchEnums";
|
|
3
3
|
export declare namespace GroupChartEvents {
|
|
4
4
|
function addBarClickCallback(chart: RcsbChartInterface, returnType: ReturnType): void;
|
|
5
5
|
function addTooltipText(chart: RcsbChartInterface): void;
|
|
@@ -2,7 +2,7 @@
|
|
|
2
2
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
3
3
|
exports.GroupChartEvents = void 0;
|
|
4
4
|
const tslib_1 = require("tslib");
|
|
5
|
-
const SearchEnums_1 = require("@rcsb/rcsb-api-tools/
|
|
5
|
+
const SearchEnums_1 = require("@rcsb/rcsb-api-tools/lib/RcsbSearch/Types/SearchEnums");
|
|
6
6
|
const SearchQueryTools_1 = require("../../../RcsbSeacrh/SearchQueryTools");
|
|
7
7
|
const web_resources_json_1 = tslib_1.__importDefault(require("../../../RcsbServerConfig/web.resources.json"));
|
|
8
8
|
const SearchQueryContextManager_1 = require("../RcsbGroupSeacrhQuery/SearchQueryContextManager");
|
|
@@ -1,5 +1,5 @@
|
|
|
1
|
-
import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/
|
|
2
|
-
import { SearchQuery } from "@rcsb/rcsb-api-tools/
|
|
1
|
+
import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/lib/RcsbDw/Types/DwEnums";
|
|
2
|
+
import { SearchQuery } from "@rcsb/rcsb-api-tools/lib/RcsbSearch/Types/SearchQueryInterface";
|
|
3
3
|
import { ChartMapType } from "./GroupChartLayout";
|
|
4
4
|
export declare namespace GroupChartMap {
|
|
5
5
|
type ChartObjectIdType = "included" | "excluded";
|
|
@@ -1,7 +1,7 @@
|
|
|
1
1
|
import React, { ReactNode } from "react";
|
|
2
2
|
import { ChartMapType } from "./GroupChartLayout";
|
|
3
|
-
import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/
|
|
4
|
-
import { SearchQuery } from "@rcsb/rcsb-api-tools/
|
|
3
|
+
import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/lib/RcsbDw/Types/DwEnums";
|
|
4
|
+
import { SearchQuery } from "@rcsb/rcsb-api-tools/lib/RcsbSearch/Types/SearchQueryInterface";
|
|
5
5
|
import { GroupChartAdditionalProperties } from "./GroupChartAdditionalProperties";
|
|
6
6
|
interface RcsbGroupChartInterface {
|
|
7
7
|
groupProvenanceId: GroupProvenanceId;
|
|
@@ -1,8 +1,8 @@
|
|
|
1
1
|
import React, { ReactNode } from "react";
|
|
2
2
|
import { FacetStoreInterface } from "../../../RcsbSeacrh/FacetStore/FacetStoreInterface";
|
|
3
|
-
import { BucketFacet } from "@rcsb/rcsb-api-tools/
|
|
4
|
-
import { ReturnType } from "@rcsb/rcsb-api-tools/
|
|
5
|
-
import { SearchQuery } from "@rcsb/rcsb-api-tools/
|
|
3
|
+
import { BucketFacet } from "@rcsb/rcsb-api-tools/lib/RcsbSearch/Types/SearchResultInterface";
|
|
4
|
+
import { ReturnType } from "@rcsb/rcsb-api-tools/lib/RcsbSearch/Types/SearchEnums";
|
|
5
|
+
import { SearchQuery } from "@rcsb/rcsb-api-tools/lib/RcsbSearch/Types/SearchQueryInterface";
|
|
6
6
|
interface RcsbStatsChartInterface {
|
|
7
7
|
facetStore: FacetStoreInterface;
|
|
8
8
|
searchQuery: SearchQuery;
|
package/lib/commonjs/RcsbGroupWeb/RcsbGroupView/RcsbGroupContent/RcsbGroupContentComponent.d.ts
CHANGED
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
import React from "react";
|
|
2
|
-
import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/
|
|
3
|
-
import { SearchQuery } from "@rcsb/rcsb-api-tools/
|
|
2
|
+
import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/lib/RcsbDw/Types/DwEnums";
|
|
3
|
+
import { SearchQuery } from "@rcsb/rcsb-api-tools/lib/RcsbSearch/Types/SearchQueryInterface";
|
|
4
4
|
interface RcsbGroupContentInterface extends RcsbGroupContentTextInterface {
|
|
5
5
|
groupProvenanceId: GroupProvenanceId;
|
|
6
6
|
groupId: string;
|
package/lib/commonjs/RcsbGroupWeb/RcsbGroupView/RcsbGroupContent/RcsbGroupContentComponent.js
CHANGED
|
@@ -9,7 +9,7 @@ const SearchQueryContextManager_1 = require("../RcsbGroupSeacrhQuery/SearchQuery
|
|
|
9
9
|
const web_resources_json_1 = tslib_1.__importDefault(require("../../../RcsbServerConfig/web.resources.json"));
|
|
10
10
|
const SearchQueryTools_1 = require("../../../RcsbSeacrh/SearchQueryTools");
|
|
11
11
|
const GroupProvenanceToAggregationType_1 = require("../../../RcsbUtils/Groups/GroupProvenanceToAggregationType");
|
|
12
|
-
const SearchEnums_1 = require("@rcsb/rcsb-api-tools/
|
|
12
|
+
const SearchEnums_1 = require("@rcsb/rcsb-api-tools/lib/RcsbSearch/Types/SearchEnums");
|
|
13
13
|
const Operator_1 = require("../../../RcsbUtils/Helpers/Operator");
|
|
14
14
|
class RcsbGroupContentComponent extends react_1.default.Component {
|
|
15
15
|
constructor() {
|
|
@@ -1,7 +1,7 @@
|
|
|
1
|
-
import { SearchQuery } from "@rcsb/rcsb-api-tools/
|
|
1
|
+
import { SearchQuery } from "@rcsb/rcsb-api-tools/lib/RcsbSearch/Types/SearchQueryInterface";
|
|
2
2
|
import { FacetStoreInterface } from "../../RcsbSeacrh/FacetStore/FacetStoreInterface";
|
|
3
|
-
import { ReturnType } from "@rcsb/rcsb-api-tools/
|
|
4
|
-
import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/
|
|
3
|
+
import { ReturnType } from "@rcsb/rcsb-api-tools/lib/RcsbSearch/Types/SearchEnums";
|
|
4
|
+
import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/lib/RcsbDw/Types/DwEnums";
|
|
5
5
|
import { GroupChartAdditionalProperties } from "./RcsbGroupChart/GroupChartAdditionalProperties";
|
|
6
6
|
import { RcsbGroupContentTextInterface } from "./RcsbGroupContent/RcsbGroupContentComponent";
|
|
7
7
|
import { ResidueChartInterface } from "./RcsbResidueChart/ResidueChartTools/ResidueChartTools";
|
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
import React from "react";
|
|
2
|
-
import { GroupProvenanceId, StructureDeterminationMethodology } from "@rcsb/rcsb-api-tools/
|
|
3
|
-
import { SearchQuery } from "@rcsb/rcsb-api-tools/
|
|
2
|
+
import { GroupProvenanceId, StructureDeterminationMethodology } from "@rcsb/rcsb-api-tools/lib/RcsbDw/Types/DwEnums";
|
|
3
|
+
import { SearchQuery } from "@rcsb/rcsb-api-tools/lib/RcsbSearch/Types/SearchQueryInterface";
|
|
4
4
|
interface GroupMemberItemInterface {
|
|
5
5
|
item: ItemFeaturesInterface;
|
|
6
6
|
groupId: string;
|
|
@@ -5,8 +5,8 @@ const tslib_1 = require("tslib");
|
|
|
5
5
|
const jsx_runtime_1 = require("react/jsx-runtime");
|
|
6
6
|
const react_1 = tslib_1.__importDefault(require("react"));
|
|
7
7
|
const web_resources_json_1 = tslib_1.__importDefault(require("../../../RcsbServerConfig/web.resources.json"));
|
|
8
|
-
const DwEnums_1 = require("@rcsb/rcsb-api-tools/
|
|
9
|
-
const TagDelimiter_1 = require("@rcsb/rcsb-api-tools/
|
|
8
|
+
const DwEnums_1 = require("@rcsb/rcsb-api-tools/lib/RcsbDw/Types/DwEnums");
|
|
9
|
+
const TagDelimiter_1 = require("@rcsb/rcsb-api-tools/lib/RcsbUtils/TagDelimiter");
|
|
10
10
|
const bxs_cube_svg_1 = tslib_1.__importDefault(require("./icons/bxs-cube.svg"));
|
|
11
11
|
const NA = "N/A";
|
|
12
12
|
class GroupMemberItem extends react_1.default.Component {
|
|
@@ -1,7 +1,7 @@
|
|
|
1
1
|
import React, { ReactNode } from "react";
|
|
2
2
|
import { ItemFeaturesInterface } from "./GroupMemberItem";
|
|
3
|
-
import { SearchQuery } from "@rcsb/rcsb-api-tools/
|
|
4
|
-
import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/
|
|
3
|
+
import { SearchQuery } from "@rcsb/rcsb-api-tools/lib/RcsbSearch/Types/SearchQueryInterface";
|
|
4
|
+
import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/lib/RcsbDw/Types/DwEnums";
|
|
5
5
|
interface GroupMembersGridInterface {
|
|
6
6
|
groupProvenanceId: GroupProvenanceId;
|
|
7
7
|
groupId: string;
|
|
@@ -7,12 +7,12 @@ const react_1 = tslib_1.__importDefault(require("react"));
|
|
|
7
7
|
const react_bootstrap_1 = require("react-bootstrap");
|
|
8
8
|
const GroupMemberItem_1 = require("./GroupMemberItem");
|
|
9
9
|
const SearchQueryTools_1 = require("../../../RcsbSeacrh/SearchQueryTools");
|
|
10
|
-
const SearchMetadata_1 = require("@rcsb/rcsb-api-tools/
|
|
11
|
-
const SearchEnums_1 = require("@rcsb/rcsb-api-tools/
|
|
12
|
-
const DwEnums_1 = require("@rcsb/rcsb-api-tools/
|
|
10
|
+
const SearchMetadata_1 = require("@rcsb/rcsb-api-tools/lib/RcsbSearch/Types/SearchMetadata");
|
|
11
|
+
const SearchEnums_1 = require("@rcsb/rcsb-api-tools/lib/RcsbSearch/Types/SearchEnums");
|
|
12
|
+
const DwEnums_1 = require("@rcsb/rcsb-api-tools/lib/RcsbDw/Types/DwEnums");
|
|
13
13
|
const RcsbRequestContextManager_1 = require("../../../RcsbRequest/RcsbRequestContextManager");
|
|
14
14
|
const uniqid_1 = tslib_1.__importDefault(require("uniqid"));
|
|
15
|
-
const TagDelimiter_1 = require("@rcsb/rcsb-api-tools/
|
|
15
|
+
const TagDelimiter_1 = require("@rcsb/rcsb-api-tools/lib/RcsbUtils/TagDelimiter");
|
|
16
16
|
class GroupMembersGrid extends react_1.default.Component {
|
|
17
17
|
constructor() {
|
|
18
18
|
super(...arguments);
|
package/lib/commonjs/RcsbGroupWeb/RcsbGroupView/RcsbGroupMembers/RcsbGroupMembersComponent.d.ts
CHANGED
|
@@ -1,7 +1,7 @@
|
|
|
1
1
|
import React, { ReactNode } from "react";
|
|
2
|
-
import { SearchQuery } from "@rcsb/rcsb-api-tools/
|
|
3
|
-
import { QueryResult } from "@rcsb/rcsb-api-tools/
|
|
4
|
-
import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/
|
|
2
|
+
import { SearchQuery } from "@rcsb/rcsb-api-tools/lib/RcsbSearch/Types/SearchQueryInterface";
|
|
3
|
+
import { QueryResult } from "@rcsb/rcsb-api-tools/lib/RcsbSearch/Types/SearchResultInterface";
|
|
4
|
+
import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/lib/RcsbDw/Types/DwEnums";
|
|
5
5
|
interface RcsbGroupMembersInterface {
|
|
6
6
|
groupProvenanceId: GroupProvenanceId;
|
|
7
7
|
groupId: string;
|
package/lib/commonjs/RcsbGroupWeb/RcsbGroupView/RcsbGroupMembers/RcsbGroupMembersComponent.js
CHANGED
|
@@ -8,9 +8,9 @@ const react_1 = tslib_1.__importDefault(require("react"));
|
|
|
8
8
|
const classes = tslib_1.__importStar(require("../../../scss/bootstrap-group-display.module.scss"));
|
|
9
9
|
const GroupMembersGrid_1 = require("./GroupMembersGrid");
|
|
10
10
|
const SearchQueryTools_1 = require("../../../RcsbSeacrh/SearchQueryTools");
|
|
11
|
-
const SearchEnums_1 = require("@rcsb/rcsb-api-tools/
|
|
11
|
+
const SearchEnums_1 = require("@rcsb/rcsb-api-tools/lib/RcsbSearch/Types/SearchEnums");
|
|
12
12
|
const Slider_1 = require("./Components/Slider");
|
|
13
|
-
const DwEnums_1 = require("@rcsb/rcsb-api-tools/
|
|
13
|
+
const DwEnums_1 = require("@rcsb/rcsb-api-tools/lib/RcsbDw/Types/DwEnums");
|
|
14
14
|
const SearchQueryContextManager_1 = require("../RcsbGroupSeacrhQuery/SearchQueryContextManager");
|
|
15
15
|
const RcsbRequestContextManager_1 = require("../../../RcsbRequest/RcsbRequestContextManager");
|
|
16
16
|
class RcsbGroupMembersComponent extends react_1.default.Component {
|