@rbalchii/anchor-engine 4.7.0

package/engine/dist/services/distillation/radial-distiller-v2.js

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+/**
+ * Radial Distiller v2.0 — Decision Record Output
+ *
+ * Three-phase pipeline for semantic corpus compression:
+ * 1. COLLECT: Extract semantic blocks (headings, sections)
+ * 2. DEDUPLICATE: Block-level deduplication with SimHash
+ * 3. REASSEMBLE: Build Decision Record JSON output
+ *
+ * Prevents self-contamination by filtering distilled_* files
+ */
+import { db } from '../../core/db.js';
+import { StructuredLogger } from '../../utils/structured-logger.js';
+import { getMirrorPath } from '../mirror/mirror.js';
+import { pathManager } from '../../utils/path-manager.js';
+import crypto from 'crypto';
+import fs from 'fs';
+import path from 'path';
+import yaml from 'js-yaml';
+// Configuration
+const PGLITE_CHUNK_IDS = 100;
+const MOBILE_MEMORY_THRESHOLD = 500 * 1024 * 1024;
+// Filtering patterns to prevent self-contamination
+const DISTILLATION_OUTPUT_PATTERNS = [
+    /distilled_.*\.(yaml|json|md)$/i,
+    /MASTER_DISTILLED_.*\.(yaml|json|md)$/i,
+    /_distilled_.*\.(yaml|json|md)$/i
+];
+/**
+ * Check if a file should be excluded (distillation output)
+ */
+function isDistillationOutput(filePath) {
+    const fileName = path.basename(filePath);
+    return DISTILLATION_OUTPUT_PATTERNS.some(pattern => pattern.test(fileName));
+}
+/**
+ * Extract semantic blocks from markdown text
+ * Splits on headings and detects section types
+ */
+function extractSemanticBlocks(content, sourcePath, mtime) {
+    const blocks = [];
+    const lines = content.split('\n');
+    let currentBlock = [];
+    let currentType = 'content';
+    let currentLevel = 0;
+    let currentHeading = '';
+    const headingPattern = /^(#{1,6})\s+(.+)$/;
+    const typeKeywords = {
+        'problem': 'problem',
+        'issue': 'problem',
+        'challenge': 'problem',
+        'solution': 'solution',
+        'approach': 'solution',
+        'implementation': 'solution',
+        'rationale': 'rationale',
+        'why': 'rationale',
+        'reason': 'rationale',
+        'status': 'status',
+        'state': 'status'
+    };
+    function saveBlock() {
+        if (currentBlock.length > 0) {
+            const blockContent = currentBlock.join('\n').trim();
+            if (blockContent) {
+                const simhash = computeSimHash(blockContent);
+                blocks.push({
+                    id: crypto.createHash('sha256').update(blockContent).digest('hex').substring(0, 16),
+                    type: currentType,
+                    content: blockContent,
+                    heading: currentHeading || undefined,
+                    level: currentLevel,
+                    provenance: [sourcePath],
+                    mtime,
+                    simhash,
+                    tags: extractTags(blockContent)
+                });
+            }
+        }
+    }
+    for (const line of lines) {
+        const headingMatch = line.match(headingPattern);
+        if (headingMatch) {
+            // Save previous block
+            saveBlock();
+            // Start new block
+            currentLevel = headingMatch[1].length;
+            currentHeading = headingMatch[2].trim();
+            currentBlock = [line];
+            // Detect type from heading
+            const headingLower = currentHeading.toLowerCase();
+            currentType = 'content';
+            for (const [keyword, type] of Object.entries(typeKeywords)) {
+                if (headingLower.includes(keyword)) {
+                    currentType = type;
+                    break;
+                }
+            }
+            // Override for heading levels
+            if (currentLevel === 1)
+                currentType = 'heading1';
+            else if (currentLevel === 2)
+                currentType = 'heading2';
+            else if (currentLevel === 3)
+                currentType = 'heading3';
+        }
+        else {
+            currentBlock.push(line);
+        }
+    }
+    // Save last block
+    saveBlock();
+    return blocks;
+}
+/**
+ * Compute SimHash for a block (placeholder - use existing simhash service)
+ */
+function computeSimHash(text) {
+    // Simplified simhash - in production use @rbalchii/anchor-fingerprint-wasm
+    const hash = crypto.createHash('sha256').update(text.toLowerCase().replace(/\s+/g, ' ')).digest('hex');
+    return hash.substring(0, 16);
+}
+/**
+ * Extract tags from content
+ */
+function extractTags(content) {
+    const tagPattern = /#(\w+)/g;
+    const tags = [];
+    let match;
+    while ((match = tagPattern.exec(content)) !== null) {
+        tags.push(match[1].toLowerCase());
+    }
+    return tags;
+}
+/**
+ * Deduplicate blocks by SimHash within same type
+ */
+function deduplicateBlocks(blocks) {
+    const uniqueBlocks = new Map();
+    for (const block of blocks) {
+        const key = `${block.type}:${block.simhash}`;
+        if (!uniqueBlocks.has(key)) {
+            uniqueBlocks.set(key, block);
+        }
+        else {
+            // Merge provenance
+            const existing = uniqueBlocks.get(key);
+            for (const prov of block.provenance) {
+                if (!existing.provenance.includes(prov)) {
+                    existing.provenance.push(prov);
+                }
+            }
+            // Use earliest mtime
+            if (block.mtime < existing.mtime) {
+                existing.mtime = block.mtime;
+            }
+        }
+    }
+    return Array.from(uniqueBlocks.values());
+}
+/**
+ * Assemble Decision Records from blocks
+ */
+function assembleDecisionRecords(blocks) {
+    const records = [];
+    const blocksBySource = new Map();
+    // Group blocks by primary source
+    for (const block of blocks) {
+        const primarySource = block.provenance[0];
+        if (!blocksBySource.has(primarySource)) {
+            blocksBySource.set(primarySource, []);
+        }
+        blocksBySource.get(primarySource).push(block);
+    }
+    // Create decision record for each source
+    for (const [source, sourceBlocks] of blocksBySource.entries()) {
+        const fileName = path.basename(source, path.extname(source));
+        // Find title (first heading1 or heading2)
+        const titleBlock = sourceBlocks.find(b => b.type === 'heading1' || b.type === 'heading2');
+        const title = titleBlock?.heading || fileName;
+        // Extract problem
+        const problemBlock = sourceBlocks.find(b => b.type === 'problem');
+        const problem = problemBlock?.content;
+        // Extract solutions (numbered list or solution blocks)
+        const solutionBlocks = sourceBlocks.filter(b => b.type === 'solution');
+        const solution = solutionBlocks.map(b => b.content.split('\n').filter(l => /^\d+\./.test(l.trim())).join('\n')).flat();
+        // Extract rationale
+        const rationaleBlock = sourceBlocks.find(b => b.type === 'rationale');
+        const rationale = rationaleBlock?.content;
+        // Extract status
+        const statusBlock = sourceBlocks.find(b => b.type === 'status');
+        let status = 'active';
+        if (statusBlock) {
+            const statusText = statusBlock.content.toLowerCase();
+            if (statusText.includes('deprecated') || statusText.includes('superseded')) {
+                status = 'deprecated';
+            }
+            else if (statusText.includes('archived') || statusText.includes('legacy')) {
+                status = 'archived';
+            }
+        }
+        // Extract supersedes
+        const supersedes = [];
+        const supersedesMatch = title.match(/supersedes.*?(\d+)/i);
+        if (supersedesMatch) {
+            supersedes.push(`std-${supersedesMatch[1].padStart(3, '0')}`);
+        }
+        // Collect all tags
+        const allTags = Array.from(new Set(sourceBlocks.flatMap(b => b.tags || [])));
+        // Use earliest mtime as timestamp
+        const earliestMtime = Math.min(...sourceBlocks.map(b => b.mtime));
+        const timestamp = new Date(earliestMtime).toISOString();
+        records.push({
+            id: fileName.match(/\d+/)?.[0] ? `std-${fileName.match(/\d+/)[0].padStart(3, '0')}` : fileName,
+            title,
+            problem,
+            solution: solution.length > 0 ? solution : undefined,
+            rationale,
+            supersedes: supersedes.length > 0 ? supersedes : undefined,
+            status,
+            timestamp,
+            provenance: sourceBlocks.flatMap(b => b.provenance),
+            tags: allTags
+        });
+    }
+    return records;
+}
+/**
+ * Extract digital object metadata from a compound
+ * Works for any file type, with special handling for chat JSONL files
+ */
+function extractDigitalObjectMetadata(compound, content, mtime, ingestedAt) {
+    const pathExt = path.extname(compound.path).toLowerCase();
+    const sourceType = pathExt.slice(1) || 'unknown';
+    // Base metadata (always present)
+    const metadata = {
+        id: crypto.createHash('sha256').update(compound.path).digest('hex').substring(0, 16),
+        source_path: compound.path,
+        source_type: sourceType,
+        modified_at: new Date(mtime).toISOString(),
+        ingested_at: ingestedAt,
+        bucket: compound.provenance || 'unknown',
+        compound_id: compound.id,
+        size_bytes: Buffer.byteLength(content, 'utf-8'),
+        line_count: content.split('\n').length,
+        char_count: content.length,
+        topics: [],
+        entities: [],
+        tags: []
+    };
+    // Extract topics from content (simple keyword extraction)
+    const topicKeywords = content.match(/\b[A-Z][a-z]+(?:\s+[A-Z][a-z]+)+\b/g) || [];
+    metadata.topics = Array.from(new Set(topicKeywords.slice(0, 10)));
+    // Extract tags (hashtag pattern)
+    const tagMatches = content.match(/#(\w+)/g) || [];
+    metadata.tags = Array.from(new Set(tagMatches.map(t => t.slice(1).toLowerCase())));
+    return metadata;
+}
+/**
+ * Extract chat session metadata from JSONL content
+ * Returns ChatSessionMetadata if valid chat session, null otherwise
+ */
+function extractChatSessionMetadata(baseMetadata, content, compound) {
+    // Only process JSONL files from inbox
+    if (baseMetadata.source_type !== 'jsonl' || !baseMetadata.bucket.includes('inbox')) {
+        return null;
+    }
+    // Extract session_id from filename (UUID pattern)
+    const filename = path.basename(compound.path, '.jsonl');
+    const sessionUuidMatch = filename.match(/^[0-9a-f]{8}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{12}$/i);
+    if (!sessionUuidMatch) {
+        return null;
+    }
+    const lines = content.split('\n').filter(line => line.trim());
+    if (lines.length === 0) {
+        return null;
+    }
+    // Parse messages
+    const messages = [];
+    const commands = [];
+    const participants = new Set();
+    const modelsUsed = new Set();
+    let firstTimestamp = null;
+    let lastTimestamp = null;
+    for (const line of lines) {
+        try {
+            const msg = JSON.parse(line);
+            messages.push(msg);
+            // Track timestamps
+            if (msg.timestamp) {
+                if (!firstTimestamp)
+                    firstTimestamp = msg.timestamp;
+                lastTimestamp = msg.timestamp;
+            }
+            // Track participants
+            if (msg.type)
+                participants.add(msg.type);
+            if (msg.role)
+                participants.add(msg.role);
+            // Track commands
+            if (msg.subtype === 'slash_command' && msg.systemPayload?.rawCommand) {
+                const cmd = msg.systemPayload.rawCommand;
+                if (!commands.includes(cmd)) {
+                    commands.push(cmd);
+                }
+            }
+            // Track models
+            if (msg.model) {
+                modelsUsed.add(msg.model);
+            }
+        }
+        catch {
+            // Skip malformed lines
+        }
+    }
+    return {
+        ...baseMetadata,
+        session_id: filename,
+        session_start: firstTimestamp || baseMetadata.modified_at,
+        session_end: lastTimestamp || baseMetadata.modified_at,
+        commands,
+        message_count: messages.length,
+        participants: Array.from(participants),
+        models_used: Array.from(modelsUsed)
+    };
+}
+/**
+ * Build session index from chat session metadata
+ */
+function buildSessionIndex(chatSessions) {
+    return chatSessions.map(session => ({
+        session_id: session.session_id,
+        date: session.session_start,
+        commands: session.commands,
+        topics: session.topics || [],
+        full_log_path: session.source_path,
+        message_count: session.message_count,
+        participants: session.participants
+    }));
+}
+/**
+ * Main distillation function
+ */
+export async function radialDistill(request) {
+    const startTime = Date.now();
+    const ingestedAt = new Date().toISOString();
+    StructuredLogger.info('RADIAL_DISTILL_V2', {
+        endpoint: '/v1/memory/distill',
+        format: request.output_format || 'decision-records'
+    });
+    try {
+        // Phase 1: COLLECT - Extract semantic blocks and metadata
+        const allBlocks = [];
+        const digitalObjects = [];
+        const chatSessions = [];
+        let compoundsProcessed = 0;
+        // Get compounds from database or use provided IDs
+        let compoundQuery = 'SELECT id, path, provenance FROM compounds';
+        const params = [];
+        if (request.seed?.compound_ids && request.seed.compound_ids.length > 0) {
+            compoundQuery += ' WHERE id IN (' + request.seed.compound_ids.map(() => '?').join(',') + ')';
+            params.push(...request.seed.compound_ids);
+        }
+        else if (request.seed?.buckets && request.seed.buckets.length > 0) {
+            compoundQuery += ' WHERE provenance IN (' + request.seed.buckets.map(() => '?').join(',') + ')';
+            params.push(...request.seed.buckets);
+        }
+        const compounds = (await db.run(compoundQuery, params)).results || [];
+        for (const compound of compounds) {
+            // Skip distillation outputs (prevent self-contamination)
+            if (isDistillationOutput(compound.path)) {
+                continue;
+            }
+            compoundsProcessed++;
+            // Get content from mirrored_brain or compound body
+            let content = '';
+            const mirrorPath = getMirrorPath(path.join(process.cwd(), 'mirrored_brain'));
+            const localPath = path.join(mirrorPath, compound.path);
+            if (fs.existsSync(localPath)) {
+                content = fs.readFileSync(localPath, 'utf-8');
+            }
+            else {
+                // Fallback to database
+                const result = await db.run('SELECT compound_body FROM compounds WHERE id = ?', [compound.id]);
+                content = result.results?.[0]?.compound_body || '';
+            }
+            // Get file mtime
+            let mtime = Date.now();
+            if (fs.existsSync(localPath)) {
+                const stats = fs.statSync(localPath);
+                mtime = stats.mtimeMs;
+            }
+            // Extract semantic blocks
+            const blocks = extractSemanticBlocks(content, compound.path, mtime);
+            allBlocks.push(...blocks);
+            // Extract digital object metadata (NEW)
+            const baseMetadata = extractDigitalObjectMetadata(compound, content, mtime, ingestedAt);
+            digitalObjects.push(baseMetadata);
+            // Extract chat session metadata if applicable (NEW)
+            const chatMetadata = extractChatSessionMetadata(baseMetadata, content, compound);
+            if (chatMetadata) {
+                chatSessions.push(chatMetadata);
+            }
+        }
+        // Build session index from chat sessions (NEW)
+        const sessionIndex = buildSessionIndex(chatSessions);
+        // Phase 2: DEDUPLICATE - Block-level deduplication
+        const uniqueBlocks = deduplicateBlocks(allBlocks);
+        // Phase 3: REASSEMBLE - Build Decision Records
+        const decisionRecords = assembleDecisionRecords(uniqueBlocks);
+        // Generate output
+        const outputFormat = request.output_format || 'decision-records';
+        let outputPath;
+        let outputSize = 0;
+        // Determine if we should save to file
+        const shouldSaveToFile = request.output_path || request.auto_save;
+        if (outputFormat === 'json' || outputFormat === 'decision-records') {
+            // Include digital objects and session index in JSON output
+            const fullOutput = {
+                metadata: {
+                    source: 'Anchor Engine Radial Distiller v2.0',
+                    distilled_at: new Date().toISOString(),
+                    decision_records: decisionRecords.length,
+                    digital_objects_count: digitalObjects.length,
+                    session_index_count: sessionIndex.length
+                },
+                records: decisionRecords,
+                digital_objects: digitalObjects,
+                session_index: sessionIndex
+            };
+            const jsonOutput = JSON.stringify(fullOutput, null, 2);
+            outputSize = jsonOutput.length;
+            if (shouldSaveToFile) {
+                const distillsDir = path.join(pathManager.getNotebookDir(), 'distills');
+                if (!fs.existsSync(distillsDir)) {
+                    fs.mkdirSync(distillsDir, { recursive: true });
+                }
+                outputPath = request.output_path || path.join(distillsDir, `distilled_standards_${new Date().toISOString().replace(/[:.]/g, '-')}.json`);
+                fs.writeFileSync(outputPath, jsonOutput);
+            }
+        }
+        else if (outputFormat === 'yaml') {
+            // Backward compatibility - legacy YAML format
+            const yamlOutput = yaml.dump({
+                metadata: {
+                    source: 'Anchor Engine Radial Distiller v2.0',
+                    distilled_at: new Date().toISOString(),
+                    decision_records: decisionRecords.length,
+                    digital_objects_count: digitalObjects.length,
+                    session_index_count: sessionIndex.length
+                },
+                records: decisionRecords,
+                digital_objects: digitalObjects,
+                session_index: sessionIndex
+            });
+            outputSize = yamlOutput.length;
+            if (shouldSaveToFile) {
+                const distillsDir = path.join(pathManager.getNotebookDir(), 'distills');
+                if (!fs.existsSync(distillsDir)) {
+                    fs.mkdirSync(distillsDir, { recursive: true });
+                }
+                outputPath = request.output_path || path.join(distillsDir, `distilled_${new Date().toISOString().replace(/[:.]/g, '-')}.yaml`);
+                fs.writeFileSync(outputPath, yamlOutput);
+            }
+        }
+        const duration = Date.now() - startTime;
+        const result = {
+            stats: {
+                compounds_processed: compoundsProcessed,
+                blocks_total: allBlocks.length,
+                blocks_unique: uniqueBlocks.length,
+                decision_records: decisionRecords.length,
+                compression_ratio: `${(allBlocks.length / Math.max(1, uniqueBlocks.length)).toFixed(1)}:1`,
+                duration_ms: duration,
+                memory_peak_mb: Math.round(process.memoryUsage().heapUsed / 1024 / 1024)
+            },
+            output: {
+                format: outputFormat,
+                path: outputPath,
+                size_bytes: outputSize,
+                records_created: decisionRecords.length
+            },
+            provenance: {
+                source_compounds: compounds.map((c) => c.path),
+                distilled_at: new Date().toISOString(),
+                parameters: request
+            },
+            // New: Digital object metadata for all processed compounds
+            digital_objects: digitalObjects,
+            // New: Session index for chat sessions (empty array if no chat sessions)
+            session_index: sessionIndex
+        };
+        StructuredLogger.info('RADIAL_DISTILL_V2_COMPLETE', {
+            records: result.stats.decision_records,
+            compression: result.stats.compression_ratio,
+            duration_ms: duration
+        });
+        return result;
+    }
+    catch (error) {
+        StructuredLogger.error('RADIAL_DISTILL_V2_ERROR', error);
+        throw error;
+    }
+}
+//# sourceMappingURL=radial-distiller-v2.js.map

package/engine/dist/services/distillation/radial-distiller-v2.js.map

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package/engine/dist/services/distillation/radial-distiller.d.ts

@@ -0,0 +1,63 @@
+/**
+ * Radial Distiller — Standard 133 Implementation
+ *
+ * Three-phase pipeline for lossless corpus compression:
+ * 1. COLLECT: Radially inflate all compounds
+ * 2. DEDUPLICATE: Line-level hash-based deduplication
+ * 3. REASSEMBLE: Build coherent output compounds
+ *
+ * Memory-conscious: streaming mode for mobile, batch mode for desktop
+ */
+export interface RadialDistillRequest {
+    seed?: {
+        query?: string;
+        compound_ids?: string[];
+        buckets?: string[];
+    };
+    radius?: number;
+    max_radius?: number;
+    normalization?: 'strict' | 'lenient';
+    preserve_formatting?: boolean;
+    streaming?: boolean;
+    chunk_size?: number;
+    output_format?: 'yaml' | 'json' | 'compound';
+    output_path?: string;
+    export_to_inbox?: boolean;
+}
+export interface DistillLine {
+    content: string;
+    normalizedHash: string;
+    originalHash: string;
+    provenance: string[];
+    timestamps: number[];
+    compoundId: string;
+    lineNumber: number;
+}
+export interface RadialDistillResult {
+    stats: {
+        compounds_processed: number;
+        lines_total: number;
+        lines_unique: number;
+        lines_duplicate: number;
+        compression_ratio: string;
+        duration_ms: number;
+        memory_peak_mb: number;
+    };
+    output: {
+        format: string;
+        path?: string;
+        size_bytes: number;
+        compounds_created: number;
+    };
+    provenance: {
+        source_compounds: string[];
+        distilled_at: string;
+        parameters: RadialDistillRequest;
+    };
+}
+/**
+ * Main entry point: Radial Distillation
+ * Standard 133 implementation
+ */
+export declare function radialDistill(request: RadialDistillRequest): Promise<RadialDistillResult>;
+//# sourceMappingURL=radial-distiller.d.ts.map

package/engine/dist/services/distillation/radial-distiller.d.ts.map

@@ -0,0 +1 @@
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