@quiltdata/benchling-webhook 0.5.4 → 0.6.1-20251104T043302Z

package/dist/package.json

@@ -1,6 +1,6 @@
 {
     "name": "@quiltdata/benchling-webhook",
-    "version": "0.5.4",
+    "version": "0.6.1-20251104T043302Z",
     "description": "AWS CDK deployment for Benchling webhook processing using Fargate - Deploy directly with npx",
     "main": "dist/lib/index.js",
     "types": "dist/lib/index.d.ts",
@@ -14,32 +14,29 @@
         "benchling-webhook": "./dist/bin/cli.js"
     },
     "scripts": {
-        "clean": "rm -rf cdk.out */{*.js,*.d.ts}",
-        "test": "npm run typecheck && npm run test:ts && npm run test:python",
-        "test-ci": "npm run typecheck && npm run test:ts",
-        "typecheck": "tsc --noEmit",
-        "test:ts": "NODE_ENV=test TMPDIR=./.tmp node --max-old-space-size=4096 ./node_modules/.bin/jest",
-        "test:python": "make -C docker test-unit",
-        "cdk": "npm run test && npm run cli -- --yes",
-        "cdk:dev": "node bin/cdk-dev.js",
-        "lint": "eslint . --ext .ts --fix",
         "build": "tsc",
-        "prebuild": "rm -rf dist",
+        "build:clean": "rm -rf cdk.out dist */{*.js,*.d.ts}",
+        "build:synth": "npx cdk synth",
+        "build:typecheck": "tsc --noEmit",
+        "deploy:dev": "npm run test && node bin/cdk-dev.js",
+        "deploy:prod": "node dist/bin/cli.js deploy",
+        "lint": "eslint . --ext .ts --fix && make -C docker lint",
         "postbuild": "chmod +x dist/bin/cli.js && cp bin/*.js dist/bin/ 2>/dev/null || true",
-        "cli": "ts-node bin/cli.ts",
-        "synth": "npx cdk synth",
-        "logs": "node bin/check-logs.js",
-        "event": "node bin/send-event.js",
-        "check": "npm run cdk && npm run event && sleep 45 && npm run logs",
-        "docker:test": "make -C docker test",
-        "docker-push": "make -C docker push-local",
-        "docker-check": "make -C docker docker-validate",
-        "release": "npm run test && node bin/release.js",
-        "release:dev": "npm run test && node bin/release.js dev",
-        "notes": "bin/release-notes.sh \"$(jq -r .version package.json)\" \"712023778557.dkr.ecr.us-east-1.amazonaws.com/quiltdata/benchling:$(jq -r .version package.json)\" \"false\" \"$(jq -r .name package.json)\"",
-        "version": "node bin/version.js patch",
-        "version:patch": "npm run version -- patch",
-        "prepublishOnly": "npm run build"
+        "prebuild": "rm -rf dist",
+        "prepublishOnly": "npm run build",
+        "release": "npm run test && node bin/release.js && make -C docker push-ci",
+        "release:tag": "node bin/version.js && git push --tags",
+        "setup": "ts-node scripts/install-wizard.ts",
+        "setup:health": "ts-node scripts/config-health-check.ts",
+        "setup:infer": "ts-node scripts/infer-quilt-config.ts",
+        "setup:sync-secrets": "ts-node scripts/sync-secrets.ts",
+        "test": "npm run build:typecheck && npm run test:ts && npm run test:python",
+        "test:ci": "npm run build:typecheck && npm run test:ts",
+        "test:local": "make -C docker build && make -C docker test-local",
+        "test:python": "make -C docker test-unit",
+        "test:remote": "npm run deploy:dev && make -C docker test-deployed-dev",
+        "test:ts": "cross-env NODE_ENV=test jest --maxWorkers=50%",
+        "version": "node bin/version.js"
     },
     "keywords": [
         "benchling",
@@ -67,8 +64,10 @@
         "@typescript-eslint/eslint-plugin": "^8.26.1",
         "@typescript-eslint/parser": "^8.26.1",
         "aws-cdk": "2.1031.1",
+        "aws-sdk-client-mock": "^4.1.0",
+        "cross-env": "^10.1.0",
         "dotenv": "^17.2.3",
-        "esbuild": "0.25.11",
+        "esbuild": "0.25.12",
         "eslint": "^9.22.0",
         "globals": "^16.0.0",
         "jest": "^30.0.0",
@@ -79,7 +78,13 @@
     "dependencies": {
         "@aws-sdk/client-cloudformation": "^3.920.0",
         "@aws-sdk/client-s3": "^3.758.0",
+        "@aws-sdk/client-secrets-manager": "^3.922.0",
+        "@aws-sdk/client-sts": "^3.922.0",
+        "@aws-sdk/credential-providers": "^3.922.0",
+        "@types/inquirer": "^9.0.9",
+        "@types/lodash.merge": "^4.6.9",
         "adm-zip": "^0.5.10",
+        "ajv": "^8.17.1",
         "aws-cdk-lib": "2.221.1",
         "aws-sdk": "^2.1574.0",
         "boxen": "^8.0.0",
@@ -88,6 +93,9 @@
         "constructs": "^10.0.0",
         "dotenv-expand": "^12.0.3",
         "enquirer": "^2.4.1",
+        "execa": "^9.0.0",
+        "inquirer": "^12.10.0",
+        "lodash.merge": "^4.6.2",
         "ora": "^9.0.0"
     },
     "engines": {

package/dist/scripts/config-health-check.d.ts

@@ -0,0 +1,78 @@
+#!/usr/bin/env node
+/**
+ * Configuration Health Checks
+ *
+ * Validates:
+ * - XDG configuration integrity
+ * - Secrets accessibility
+ * - Benchling credential freshness
+ * - AWS resource connectivity
+ *
+ * @module scripts/config-health-check
+ */
+import { ProfileName } from "../lib/types/config";
+/**
+ * Health check result
+ */
+interface HealthCheckResult {
+    check: string;
+    status: "pass" | "fail" | "warn";
+    message: string;
+    details?: Record<string, unknown>;
+}
+/**
+ * Overall health status
+ */
+interface HealthStatus {
+    overall: "healthy" | "degraded" | "unhealthy";
+    checks: HealthCheckResult[];
+    timestamp: string;
+    profile: ProfileName;
+}
+/**
+ * Configuration health checker
+ */
+export declare class ConfigHealthChecker {
+    private logger;
+    private xdgConfig;
+    private profile;
+    constructor(profile?: ProfileName);
+    /**
+     * Checks XDG configuration file integrity
+     *
+     * @returns Health check result
+     */
+    checkXDGIntegrity(): Promise<HealthCheckResult>;
+    /**
+     * Checks AWS Secrets Manager accessibility
+     *
+     * @returns Health check result
+     */
+    checkSecretsAccess(): Promise<HealthCheckResult>;
+    /**
+     * Checks Benchling credential freshness
+     *
+     * @returns Health check result
+     */
+    checkBenchlingCredentials(): Promise<HealthCheckResult>;
+    /**
+     * Checks Quilt catalog connectivity
+     *
+     * @returns Health check result
+     */
+    checkQuiltCatalog(): Promise<HealthCheckResult>;
+    /**
+     * Checks deployment configuration
+     *
+     * @returns Health check result
+     */
+    checkDeploymentConfig(): Promise<HealthCheckResult>;
+    /**
+     * Runs all health checks
+     *
+     * @returns Complete health status
+     */
+    runAllChecks(): Promise<HealthStatus>;
+}
+export type { HealthStatus, HealthCheckResult };
+//# sourceMappingURL=config-health-check.d.ts.map

package/dist/scripts/config-health-check.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"config-health-check.d.ts","sourceRoot":"","sources":["../../scripts/config-health-check.ts"],"names":[],"mappings":";AACA;;;;;;;;;;GAUG;AAGH,OAAO,EAA+C,WAAW,EAAE,MAAM,qBAAqB,CAAC;AAM/F;;GAEG;AACH,UAAU,iBAAiB;IACvB,KAAK,EAAE,MAAM,CAAC;IACd,MAAM,EAAE,MAAM,GAAG,MAAM,GAAG,MAAM,CAAC;IACjC,OAAO,EAAE,MAAM,CAAC;IAChB,OAAO,CAAC,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;CACrC;AAED;;GAEG;AACH,UAAU,YAAY;IAClB,OAAO,EAAE,SAAS,GAAG,UAAU,GAAG,WAAW,CAAC;IAC9C,MAAM,EAAE,iBAAiB,EAAE,CAAC;IAC5B,SAAS,EAAE,MAAM,CAAC;IAClB,OAAO,EAAE,WAAW,CAAC;CACxB;AAED;;GAEG;AACH,qBAAa,mBAAmB;IAC5B,OAAO,CAAC,MAAM,CAAe;IAC7B,OAAO,CAAC,SAAS,CAAY;IAC7B,OAAO,CAAC,OAAO,CAAc;gBAEjB,OAAO,GAAE,WAAuB;IAM5C;;;;OAIG;IACU,iBAAiB,IAAI,OAAO,CAAC,iBAAiB,CAAC;IA4F5D;;;;OAIG;IACU,kBAAkB,IAAI,OAAO,CAAC,iBAAiB,CAAC;IA0D7D;;;;OAIG;IACU,yBAAyB,IAAI,OAAO,CAAC,iBAAiB,CAAC;IAmEpE;;;;OAIG;IACU,iBAAiB,IAAI,OAAO,CAAC,iBAAiB,CAAC;IAsE5D;;;;OAIG;IACU,qBAAqB,IAAI,OAAO,CAAC,iBAAiB,CAAC;IAuEhE;;;;OAIG;IACU,YAAY,IAAI,OAAO,CAAC,YAAY,CAAC;CA4CrD;AA+FD,YAAY,EAAE,YAAY,EAAE,iBAAiB,EAAE,CAAC"}