@quiltdata/benchling-webhook 0.5.4 → 0.6.1-20251104T043302Z

package/dist/lib/utils/secrets.js.map

@@ -0,0 +1 @@
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package/dist/lib/xdg-cli-wrapper.d.ts

@@ -0,0 +1,113 @@
+/**
+ * TypeScript Wrapper for Python XDG CLI
+ *
+ * Provides type-safe access to the Python XDG configuration CLI from TypeScript.
+ * This ensures consistency by delegating all XDG operations to the Python implementation.
+ *
+ * @module lib/xdg-cli-wrapper
+ */
+import type { CompleteConfig, DerivedConfig, UserConfig, DeploymentConfig, ProfileName, ConfigType } from "./types/config";
+/**
+ * CLI execution options
+ */
+interface CLIOptions {
+    profile?: ProfileName;
+    type?: ConfigType;
+    validate?: boolean;
+    backup?: boolean;
+    pretty?: boolean;
+    verbose?: boolean;
+}
+/**
+ * Base class for XDG CLI errors
+ */
+export declare class XDGCLIError extends Error {
+    readonly command: string;
+    readonly exitCode: number;
+    readonly stderr: string;
+    constructor(message: string, command: string, exitCode: number, stderr: string);
+}
+/**
+ * XDG CLI Wrapper Class
+ *
+ * Provides TypeScript interface to Python XDG CLI operations.
+ */
+export declare class XDGCLIWrapper {
+    /**
+     * Read configuration from XDG storage
+     *
+     * @param options - Read options
+     * @returns Configuration data
+     */
+    static read<T = UserConfig>(options?: CLIOptions): T;
+    /**
+     * Write configuration to XDG storage
+     *
+     * @param data - Configuration data to write
+     * @param options - Write options
+     */
+    static write(data: any, options?: CLIOptions): void;
+    /**
+     * Merge data into existing configuration
+     *
+     * @param data - Data to merge
+     * @param options - Merge options
+     */
+    static merge(data: any, options?: CLIOptions): void;
+    /**
+     * Validate configuration against schema
+     *
+     * @param options - Validation options
+     * @returns True if valid, false otherwise
+     */
+    static validate(options?: CLIOptions): boolean;
+    /**
+     * List all available profiles
+     *
+     * @returns Array of profile names
+     */
+    static listProfiles(): ProfileName[];
+    /**
+     * Export configuration as JSON
+     *
+     * @param options - Export options
+     * @returns Configuration data
+     */
+    static export<T = CompleteConfig>(options?: CLIOptions): T;
+    /**
+     * Get a specific configuration field value
+     *
+     * @param key - Field key (supports dot notation)
+     * @param options - Get options
+     * @returns Field value
+     */
+    static get(key: string, options?: CLIOptions & {
+        default?: string;
+    }): any;
+    /**
+     * Set a specific configuration field value
+     *
+     * @param key - Field key (supports dot notation)
+     * @param value - Value to set
+     * @param options - Set options
+     */
+    static set(key: string, value: any, options?: CLIOptions): void;
+    /**
+     * Read user configuration
+     */
+    static readUser(profile?: ProfileName): UserConfig;
+    /**
+     * Read derived configuration
+     */
+    static readDerived(profile?: ProfileName): DerivedConfig;
+    /**
+     * Read deployment configuration
+     */
+    static readDeploy(profile?: ProfileName): DeploymentConfig;
+    /**
+     * Read complete merged configuration
+     */
+    static readComplete(profile?: ProfileName): CompleteConfig;
+}
+export {};
+//# sourceMappingURL=xdg-cli-wrapper.d.ts.map

package/dist/lib/xdg-cli-wrapper.d.ts.map

@@ -0,0 +1 @@
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package/dist/lib/xdg-cli-wrapper.js

@@ -0,0 +1,288 @@
+"use strict";
+/**
+ * TypeScript Wrapper for Python XDG CLI
+ *
+ * Provides type-safe access to the Python XDG configuration CLI from TypeScript.
+ * This ensures consistency by delegating all XDG operations to the Python implementation.
+ *
+ * @module lib/xdg-cli-wrapper
+ */
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.XDGCLIWrapper = exports.XDGCLIError = void 0;
+const child_process_1 = require("child_process");
+const path = __importStar(require("path"));
+/**
+ * Base class for XDG CLI errors
+ */
+class XDGCLIError extends Error {
+    constructor(message, command, exitCode, stderr) {
+        super(message);
+        this.command = command;
+        this.exitCode = exitCode;
+        this.stderr = stderr;
+        this.name = "XDGCLIError";
+    }
+}
+exports.XDGCLIError = XDGCLIError;
+/**
+ * Get the path to the Python CLI script
+ */
+function getCLIPath() {
+    return path.join(__dirname, "..", "docker", "scripts", "benchling-webhook-config");
+}
+/**
+ * Execute Python CLI command
+ */
+function executeCLI(args, options = {}) {
+    const cliPath = getCLIPath();
+    const command = `python3 ${cliPath} ${args.join(" ")}`;
+    try {
+        const result = (0, child_process_1.execSync)(command, {
+            encoding: "utf-8",
+            stdio: options.captureStdout ? "pipe" : ["pipe", "pipe", "inherit"],
+            maxBuffer: 10 * 1024 * 1024, // 10MB buffer
+        });
+        return result;
+    }
+    catch (error) {
+        const stderr = error.stderr?.toString() || error.message;
+        const exitCode = error.status || 1;
+        throw new XDGCLIError(`XDG CLI command failed: ${command}`, command, exitCode, stderr);
+    }
+}
+/**
+ * XDG CLI Wrapper Class
+ *
+ * Provides TypeScript interface to Python XDG CLI operations.
+ */
+class XDGCLIWrapper {
+    /**
+     * Read configuration from XDG storage
+     *
+     * @param options - Read options
+     * @returns Configuration data
+     */
+    static read(options = {}) {
+        const args = ["read"];
+        if (options.profile) {
+            args.push("--profile", options.profile);
+        }
+        if (options.type) {
+            args.push("--type", options.type);
+        }
+        if (options.validate) {
+            args.push("--validate");
+        }
+        args.push("--compact"); // Always use compact for parsing
+        const output = executeCLI(args, { captureStdout: true, verbose: options.verbose });
+        return JSON.parse(output);
+    }
+    /**
+     * Write configuration to XDG storage
+     *
+     * @param data - Configuration data to write
+     * @param options - Write options
+     */
+    static write(data, options = {}) {
+        const args = ["write", JSON.stringify(data)];
+        if (options.profile) {
+            args.push("--profile", options.profile);
+        }
+        if (options.type) {
+            args.push("--type", options.type);
+        }
+        if (options.validate !== false) {
+            args.push("--validate");
+        }
+        if (options.backup !== false) {
+            args.push("--backup");
+        }
+        executeCLI(args, { verbose: options.verbose });
+    }
+    /**
+     * Merge data into existing configuration
+     *
+     * @param data - Data to merge
+     * @param options - Merge options
+     */
+    static merge(data, options = {}) {
+        const args = ["merge", JSON.stringify(data)];
+        if (options.profile) {
+            args.push("--profile", options.profile);
+        }
+        if (options.type) {
+            args.push("--type", options.type);
+        }
+        if (options.validate !== false) {
+            args.push("--validate");
+        }
+        if (options.backup !== false) {
+            args.push("--backup");
+        }
+        executeCLI(args, { verbose: options.verbose });
+    }
+    /**
+     * Validate configuration against schema
+     *
+     * @param options - Validation options
+     * @returns True if valid, false otherwise
+     */
+    static validate(options = {}) {
+        const args = ["validate"];
+        if (options.profile) {
+            args.push("--profile", options.profile);
+        }
+        if (options.type) {
+            args.push("--type", options.type);
+        }
+        try {
+            executeCLI(args, { verbose: options.verbose });
+            return true;
+        }
+        catch (error) {
+            if (error instanceof XDGCLIError) {
+                return false;
+            }
+            throw error;
+        }
+    }
+    /**
+     * List all available profiles
+     *
+     * @returns Array of profile names
+     */
+    static listProfiles() {
+        const output = executeCLI(["list"], { captureStdout: true });
+        // Parse output: "Available profiles:\n  default\n  dev\n..."
+        const lines = output.split("\n").filter((line) => line.trim() && !line.includes("Available profiles"));
+        return lines.map((line) => line.trim().split(/\s+/)[0]);
+    }
+    /**
+     * Export configuration as JSON
+     *
+     * @param options - Export options
+     * @returns Configuration data
+     */
+    static export(options = {}) {
+        const args = ["export"];
+        if (options.profile) {
+            args.push("--profile", options.profile);
+        }
+        if (options.type) {
+            args.push("--type", options.type);
+        }
+        args.push("--compact");
+        const output = executeCLI(args, { captureStdout: true, verbose: options.verbose });
+        return JSON.parse(output);
+    }
+    /**
+     * Get a specific configuration field value
+     *
+     * @param key - Field key (supports dot notation)
+     * @param options - Get options
+     * @returns Field value
+     */
+    static get(key, options = {}) {
+        const args = ["get", key];
+        if (options.profile) {
+            args.push("--profile", options.profile);
+        }
+        if (options.type) {
+            args.push("--type", options.type);
+        }
+        if (options.default) {
+            args.push("--default", options.default);
+        }
+        const output = executeCLI(args, { captureStdout: true, verbose: options.verbose });
+        // Try to parse as JSON, otherwise return as string
+        try {
+            return JSON.parse(output.trim());
+        }
+        catch {
+            return output.trim();
+        }
+    }
+    /**
+     * Set a specific configuration field value
+     *
+     * @param key - Field key (supports dot notation)
+     * @param value - Value to set
+     * @param options - Set options
+     */
+    static set(key, value, options = {}) {
+        const isObject = typeof value === "object";
+        const args = ["set", key, isObject ? JSON.stringify(value) : String(value)];
+        if (options.profile) {
+            args.push("--profile", options.profile);
+        }
+        if (options.type) {
+            args.push("--type", options.type);
+        }
+        if (isObject) {
+            args.push("--json");
+        }
+        if (options.backup !== false) {
+            args.push("--backup");
+        }
+        executeCLI(args, { verbose: options.verbose });
+    }
+    /**
+     * Read user configuration
+     */
+    static readUser(profile = "default") {
+        return this.read({ profile, type: "user" });
+    }
+    /**
+     * Read derived configuration
+     */
+    static readDerived(profile = "default") {
+        return this.read({ profile, type: "derived" });
+    }
+    /**
+     * Read deployment configuration
+     */
+    static readDeploy(profile = "default") {
+        return this.read({ profile, type: "deploy" });
+    }
+    /**
+     * Read complete merged configuration
+     */
+    static readComplete(profile = "default") {
+        return this.export({ profile, type: "complete" });
+    }
+}
+exports.XDGCLIWrapper = XDGCLIWrapper;
+//# sourceMappingURL=xdg-cli-wrapper.js.map

package/dist/lib/xdg-cli-wrapper.js.map

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package/dist/lib/xdg-config.d.ts

@@ -0,0 +1,187 @@
+/**
+ * XDG Configuration Management
+ *
+ * Provides XDG-compliant configuration file management for the Benchling Webhook system.
+ * Implements a three-file configuration model:
+ * - User configuration: User-provided default settings
+ * - Derived configuration: CLI-inferred configuration
+ * - Deployment configuration: Deployment-specific artifacts
+ *
+ * Supports multiple named profiles (e.g., "default", "dev", "prod") for flexible configuration management.
+ *
+ * @module xdg-config
+ */
+import { ConfigType, ProfileName, XDGConfigPaths, ConfigSet, ConfigProfile } from "./types/config";
+/**
+ * Base configuration structure (for backward compatibility)
+ */
+export interface BaseConfig {
+    [key: string]: unknown;
+}
+export type { ConfigType, XDGConfigPaths, ConfigSet };
+/**
+ * XDG Configuration Manager
+ *
+ * Manages XDG-compliant configuration files for the Benchling Webhook system.
+ */
+export declare class XDGConfig {
+    private readonly baseDir;
+    /**
+     * Creates a new XDG Configuration Manager
+     *
+     * @param baseDir - Base configuration directory (defaults to ~/.config/benchling-webhook)
+     */
+    constructor(baseDir?: string);
+    /**
+     * Gets the default XDG base directory
+     *
+     * @returns The default base directory path
+     */
+    private getDefaultBaseDir;
+    /**
+     * Expands home directory in a path
+     *
+     * @param path - Path potentially containing ~ for home directory
+     * @returns Expanded absolute path
+     */
+    private static expandHomeDir;
+    /**
+     * Gets the configuration file paths
+     *
+     * @returns Object containing paths to all configuration files
+     */
+    static getPaths(): XDGConfigPaths;
+    /**
+     * Gets the configuration file paths for this instance
+     *
+     * @returns Object containing paths to all configuration files
+     */
+    getPaths(): XDGConfigPaths;
+    /**
+     * Ensures all required configuration directories exist
+     *
+     * Creates the base configuration directory and subdirectories if they don't exist.
+     *
+     * @throws {Error} If directory creation fails
+     */
+    ensureDirectories(): void;
+    /**
+     * Gets the file path for a specific configuration type
+     *
+     * @param configType - Type of configuration to read
+     * @returns Absolute path to the configuration file
+     */
+    private getConfigPath;
+    /**
+     * Reads and parses a configuration file with schema validation
+     *
+     * @param configType - Type of configuration to read ("user", "derived", or "deploy")
+     * @returns Parsed configuration object
+     * @throws {Error} If file not found, invalid JSON, or schema validation fails
+     */
+    readConfig(configType: ConfigType): BaseConfig;
+    /**
+     * Gets the backup file path for a configuration type
+     *
+     * @param configType - Type of configuration
+     * @returns Backup file path
+     */
+    getBackupPath(configType: ConfigType): string;
+    /**
+     * Validates configuration against schema
+     *
+     * @param config - Configuration object to validate
+     * @throws {Error} If validation fails
+     */
+    private validateConfigSchema;
+    /**
+     * Writes a configuration file atomically with backup
+     *
+     * Uses a temporary file and rename operation for atomic writes.
+     * Creates a backup of the existing file before overwriting.
+     *
+     * @param configType - Type of configuration to write ("user", "derived", or "deploy")
+     * @param config - Configuration object to write
+     * @throws {Error} If validation fails or write operation fails
+     */
+    writeConfig(configType: ConfigType, config: BaseConfig): void;
+    /**
+     * Merges multiple configuration sources with priority order
+     *
+     * Merges configurations in priority order (user → derived → deploy),
+     * where later configurations override earlier ones.
+     * Uses deep merge to handle nested objects.
+     *
+     * @param configs - Configuration set to merge
+     * @returns Merged configuration object
+     */
+    mergeConfigs(configs: ConfigSet): BaseConfig;
+    /**
+     * Gets the profile directory path
+     *
+     * @param profileName - Profile name (defaults to "default")
+     * @returns Profile directory path
+     */
+    getProfileDir(profileName?: ProfileName): string;
+    /**
+     * Gets configuration file paths for a specific profile
+     *
+     * @param profileName - Profile name (defaults to "default")
+     * @returns Configuration file paths for the profile
+     */
+    getProfilePaths(profileName?: ProfileName): XDGConfigPaths;
+    /**
+     * Ensures profile directories exist
+     *
+     * @param profileName - Profile name (defaults to "default")
+     */
+    ensureProfileDirectories(profileName?: ProfileName): void;
+    /**
+     * Lists all available profiles
+     *
+     * @returns Array of profile names
+     */
+    listProfiles(): ProfileName[];
+    /**
+     * Checks if a profile exists
+     *
+     * @param profileName - Profile name to check
+     * @returns True if profile exists, false otherwise
+     */
+    profileExists(profileName: ProfileName): boolean;
+    /**
+     * Reads configuration for a specific profile
+     *
+     * @param configType - Type of configuration to read
+     * @param profileName - Profile name (defaults to "default")
+     * @returns Parsed configuration object
+     * @throws {Error} If file not found or validation fails
+     */
+    readProfileConfig(configType: ConfigType, profileName?: ProfileName): BaseConfig;
+    /**
+     * Writes configuration for a specific profile
+     *
+     * @param configType - Type of configuration to write
+     * @param config - Configuration object to write
+     * @param profileName - Profile name (defaults to "default")
+     * @throws {Error} If validation fails or write operation fails
+     */
+    writeProfileConfig(configType: ConfigType, config: BaseConfig, profileName?: ProfileName): void;
+    /**
+     * Loads a complete profile with all configuration files
+     *
+     * @param profileName - Profile name (defaults to "default")
+     * @returns Complete profile configuration
+     */
+    loadProfile(profileName?: ProfileName): ConfigProfile;
+    /**
+     * Deletes a profile and all its configuration files
+     *
+     * WARNING: This is a destructive operation!
+     *
+     * @param profileName - Profile name to delete
+     * @throws {Error} If attempting to delete the default profile or if deletion fails
+     */
+    deleteProfile(profileName: ProfileName): void;
+}
+//# sourceMappingURL=xdg-config.d.ts.map

package/dist/lib/xdg-config.d.ts.map

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