@publisle/research 0.0.0-stage → 0.1.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (147) hide show
  1. package/LICENSE +21 -0
  2. package/NOTICE.md +31 -0
  3. package/README.md +14 -2
  4. package/compiler/Dockerfile +18 -0
  5. package/compiler/README.md +80 -0
  6. package/compiler/cacert.pem +2950 -0
  7. package/compiler/install-texlive.sh +38 -0
  8. package/compiler/release.json +13 -0
  9. package/dist/article.d.ts +10 -0
  10. package/dist/article.d.ts.map +1 -0
  11. package/dist/article.js +425 -0
  12. package/dist/article.js.map +1 -0
  13. package/dist/bibtex.d.ts +2 -0
  14. package/dist/bibtex.d.ts.map +1 -0
  15. package/dist/bibtex.js +2 -0
  16. package/dist/bibtex.js.map +1 -0
  17. package/dist/citeproc.d.ts +28 -0
  18. package/dist/csl.d.ts +35 -0
  19. package/dist/csl.d.ts.map +1 -0
  20. package/dist/csl.js +315 -0
  21. package/dist/csl.js.map +1 -0
  22. package/dist/index.d.ts +13 -0
  23. package/dist/index.d.ts.map +1 -0
  24. package/dist/index.js +12 -0
  25. package/dist/index.js.map +1 -0
  26. package/dist/jats.d.ts +14 -0
  27. package/dist/jats.d.ts.map +1 -0
  28. package/dist/jats.js +197 -0
  29. package/dist/jats.js.map +1 -0
  30. package/dist/latex.d.ts +5 -0
  31. package/dist/latex.d.ts.map +1 -0
  32. package/dist/latex.js +19 -0
  33. package/dist/latex.js.map +1 -0
  34. package/dist/locales.d.ts +2 -0
  35. package/dist/locales.d.ts.map +1 -0
  36. package/dist/locales.js +67 -0
  37. package/dist/locales.js.map +1 -0
  38. package/dist/node.d.ts +66 -0
  39. package/dist/node.d.ts.map +1 -0
  40. package/dist/node.js +542 -0
  41. package/dist/node.js.map +1 -0
  42. package/dist/package.d.ts +19 -0
  43. package/dist/package.d.ts.map +1 -0
  44. package/dist/package.js +48 -0
  45. package/dist/package.js.map +1 -0
  46. package/dist/pdf.d.ts +10 -0
  47. package/dist/pdf.d.ts.map +1 -0
  48. package/dist/pdf.js +207 -0
  49. package/dist/pdf.js.map +1 -0
  50. package/dist/portable-citations.d.ts +27 -0
  51. package/dist/portable-citations.d.ts.map +1 -0
  52. package/dist/portable-citations.js +185 -0
  53. package/dist/portable-citations.js.map +1 -0
  54. package/dist/profiles.d.ts +10 -0
  55. package/dist/profiles.d.ts.map +1 -0
  56. package/dist/profiles.js +166 -0
  57. package/dist/profiles.js.map +1 -0
  58. package/dist/remote.d.ts +24 -0
  59. package/dist/remote.d.ts.map +1 -0
  60. package/dist/remote.js +139 -0
  61. package/dist/remote.js.map +1 -0
  62. package/dist/resolve.d.ts +10 -0
  63. package/dist/resolve.d.ts.map +1 -0
  64. package/dist/resolve.js +62 -0
  65. package/dist/resolve.js.map +1 -0
  66. package/package.json +53 -3
  67. package/src/article.ts +478 -0
  68. package/src/bibtex.ts +1 -0
  69. package/src/citeproc.d.ts +28 -0
  70. package/src/csl.ts +367 -0
  71. package/src/index.ts +29 -0
  72. package/src/jats.ts +242 -0
  73. package/src/latex.ts +21 -0
  74. package/src/locales.ts +126 -0
  75. package/src/node.ts +752 -0
  76. package/src/package.ts +83 -0
  77. package/src/pdf.ts +225 -0
  78. package/src/portable-citations.ts +250 -0
  79. package/src/profiles.ts +188 -0
  80. package/src/remote.ts +163 -0
  81. package/src/resolve.ts +91 -0
  82. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/BITS-embedded-index2.ent +308 -0
  83. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/BITS-question-answer2.ent +531 -0
  84. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-XHTMLtablesetup1-3.ent +629 -0
  85. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-ali-namespace1-3.ent +293 -0
  86. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-archivearticle1-3.dtd +1085 -0
  87. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-archivecustom-classes1-3.ent +409 -0
  88. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-archivecustom-mixes1-3.ent +601 -0
  89. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-archivecustom-models1-3.ent +1613 -0
  90. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-archivecustom-modules1-3.ent +404 -0
  91. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-articlemeta1-3.ent +2552 -0
  92. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-backmatter1-3.ent +540 -0
  93. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-chars1-3.ent +664 -0
  94. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-common-atts1-3.ent +360 -0
  95. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-common1-3.ent +4659 -0
  96. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-default-classes1-3.ent +1595 -0
  97. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-default-mixes1-3.ent +630 -0
  98. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-display1-3.ent +1299 -0
  99. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-format1-3.ent +997 -0
  100. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-funding1-3.ent +1100 -0
  101. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-journalmeta1-3.ent +593 -0
  102. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-link1-3.ent +604 -0
  103. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-list1-3.ent +663 -0
  104. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-math1-3.ent +563 -0
  105. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-mathmlsetup1-3.ent +491 -0
  106. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-modules1-3.ent +769 -0
  107. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-nlmcitation1-3.ent +428 -0
  108. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-notat1-3.ent +412 -0
  109. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-para1-3.ent +648 -0
  110. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-phrase1-3.ent +664 -0
  111. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-references1-3.ent +1428 -0
  112. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-related-object1-3.ent +435 -0
  113. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-section1-3.ent +463 -0
  114. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/JATS-xmlspecchars1-3.ent +528 -0
  115. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/catalog-jats-v1-3-no-base.xml +999 -0
  116. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/catalog-jats-v1-3-with-base.xml +986 -0
  117. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso8879/isobox.ent +61 -0
  118. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso8879/isocyr1.ent +88 -0
  119. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso8879/isocyr2.ent +47 -0
  120. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso8879/isodia.ent +35 -0
  121. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso8879/isolat1.ent +83 -0
  122. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso8879/isolat2.ent +142 -0
  123. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso8879/isonum.ent +97 -0
  124. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso8879/isopub.ent +105 -0
  125. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso9573-13/isoamsa.ent +167 -0
  126. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso9573-13/isoamsb.ent +143 -0
  127. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso9573-13/isoamsc.ent +43 -0
  128. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso9573-13/isoamsn.ent +114 -0
  129. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso9573-13/isoamso.ent +73 -0
  130. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso9573-13/isoamsr.ent +204 -0
  131. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso9573-13/isogrk3.ent +64 -0
  132. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso9573-13/isomfrk.ent +75 -0
  133. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso9573-13/isomopf.ent +49 -0
  134. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso9573-13/isomscr.ent +75 -0
  135. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/iso9573-13/isotech.ent +182 -0
  136. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/mathml/mmlalias.ent +564 -0
  137. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/mathml/mmlextra.ent +122 -0
  138. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/mathml2-qname-1.mod +286 -0
  139. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/mathml2.dtd +2206 -0
  140. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/xhtml-inlstyle-1.mod +34 -0
  141. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/xhtml-table-1.mod +333 -0
  142. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/xmlchars/isogrk1.ent +70 -0
  143. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/xmlchars/isogrk2.ent +41 -0
  144. package/vendor/jats/JATS-Archiving-1-3-MathML2-DTD/xmlchars/isogrk4.ent +66 -0
  145. package/vendor/jats/PROVENANCE.json +6 -0
  146. package/vendor/locales/PROVENANCE.json +5 -0
  147. package/vendor/locales/README.md +23 -0
@@ -0,0 +1,664 @@
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+ <!-- ============================================================= -->
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+ <!-- MODULE: Custom Special Characters Module -->
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+ <!-- VERSION: ANSI/NISO JATS Version 1.3 (Z39.96-2021) -->
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+ <!-- DATE: June 2021 -->
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+ <!-- -->
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+ <!-- ============================================================= -->
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+
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+ <!-- ============================================================= -->
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+ <!-- PUBLIC DOCUMENT TYPE DEFINITION -->
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+ <!-- TYPICAL INVOCATION -->
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+ <!--
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+ "-//NLM//DTD JATS (Z39.96) JATS DTD Suite Custom Special Characters Module v1.3 20210610//EN"
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+ Delivered as file "JATS-chars1-3.ent" -->
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+ <!-- ============================================================= -->
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+
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+ <!-- ============================================================= -->
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+ <!-- SYSTEM: JATS DTD Suite -->
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+ <!-- -->
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+ <!-- PURPOSE: XML special character entities -->
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+ <!-- -->
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+ <!-- CONTAINS: 1) Definitions of DTD-specific and custom -->
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+ <!-- special characters (as general entities -->
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+ <!-- defined as hexadecimal or decimal character -->
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+ <!-- entities - Unicode numbers) -->
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+ <!-- -->
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+ <!-- TAG SET SPONSOR -->
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+ <!-- National Center for Biotechnology -->
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+ <!-- Information (NCBI) -->
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+ <!-- National Library of Medicine (NLM) -->
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+ <!-- -->
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+ <!-- CREATED FOR: -->
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+ <!-- This module was created for the JATS DTD Suite. -->
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+ <!-- Digital archives and publishers may use the -->
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+ <!-- DTD as is for markup of journal literature or -->
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+ <!-- related material for archiving and transferring -->
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+ <!-- such material between archives or create a -->
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+ <!-- custom XML DTD from the Suite for -->
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+ <!-- these purposes. -->
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+ <!-- -->
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+ <!-- This DTD is in the public domain. An organization -->
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+ <!-- that wishes to create its own DTD from the suite -->
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+ <!-- may do so without permission from NLM. -->
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+ <!-- -->
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+ <!-- The suite has been set up to be extended using a -->
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+ <!-- new DTD file and a new DTD-specific customization -->
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+ <!-- module to redefine the many Parameter Entities. -->
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+ <!-- Do not modify the suite directly or redistribute -->
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+ <!-- modified versions of the suite. -->
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+ <!-- -->
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+ <!-- In the interest of maintaining consistency and -->
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+ <!-- clarity for potential users, NLM requests: -->
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+ <!-- -->
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+ <!-- 1. If you create a DTD from the JATS DTD Suite -->
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+ <!-- and intend to stay compatible with the suite, -->
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+ <!-- then please include the following statement -->
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+ <!-- as a comment in all of your DTD modules: -->
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+ <!-- "Created from, and fully compatible with, -->
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+ <!-- the ANSI/NISO Z39.96 Journal Article Tag -->
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+ <!-- Suite (JATS)." -->
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+ <!-- -->
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+ <!-- 2. If you alter one or more modules of the suite, -->
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+ <!-- then please rename your version and all its -->
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+ <!-- modules to avoid any confusion with the -->
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+ <!-- original suite. Also, please include the -->
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+ <!-- following statement as a comment in all your -->
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+ <!-- DTD modules: -->
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+ <!-- "Based in part on, but not fully compatible -->
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+ <!-- with, the ANSI/NISO Z39.96 Journal Article -->
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+ <!-- Tag Suite (JATS)." -->
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+ <!-- -->
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+ <!-- ORIGINAL CREATION DATE: -->
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+ <!-- December 2002 -->
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+ <!-- -->
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+ <!-- CREATED BY: Mulberry Technologies, Inc. for the NISO Z39.96 -->
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+ <!-- Working Group. Mulberry Technologies was -->
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+ <!-- supported by National Center for Biotechnology -->
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+ <!-- Information (NCBI), a center of the US National -->
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+ <!-- Library of Medicine (NLM). -->
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+ <!-- -->
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+ <!-- This module is part of the JATS DTD Suite. The -->
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+ <!-- Suite is a continuation of work done by NCBI, -->
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+ <!-- Mulberry Technologies, and Inera, Inc. on the NLM -->
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+ <!-- Journal Archiving and Interchange DTD Suite, which-->
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+ <!-- was originally released in December, 2002. -->
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+ <!-- -->
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+ <!-- NLM thanks the Harvard University Libraries, both -->
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+ <!-- for proposing that a draft archiving NLM DTD for -->
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+ <!-- life sciences journals be extended to accommodate -->
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+ <!-- journals in all disciplines and for sponsoring -->
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+ <!-- Inera Inc.'s collaboration with other DTD -->
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+ <!-- authors in completing NLM Version 1.0. The -->
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+ <!-- Andrew W. Mellon Foundation provided support for -->
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+ <!-- these important contributions. -->
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+ <!-- -->
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+ <!-- Suggestions for refinements and enhancements to -->
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+ <!-- this DTD should be sent in email to: -->
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+ <!-- jats@ncbi.nlm.nih.gov -->
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+ <!-- ============================================================= -->
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+
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+
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+ <!-- ============================================================= -->
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+ <!-- DTD VERSION/CHANGE HISTORY -->
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+ <!-- ============================================================= -->
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+ <!--
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+ Version Reason/Occasion (who) vx.x (yyyy-mm-dd)
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+ ==============================================================
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+ JATS Version 1.3 (ANSI/NISO Z39.96-2021)
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+ (DAL/BTU) v1.3 (2021-06-10)
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+
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+ ANSI NISO JATS is a continuing maintenance NISO Standard,
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+ which requires voting by both the NISO and ANSI memberships
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+ to be changed. This version of the NISO JATS was approved
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+ by ANSI vote on June 10, 2021, so it supersedes all Committee
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+ Drafts as well as the draft version JATS 1.3 2021 (the version
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+ submitted for vote), becoming NISO JATS v1.3 20210610
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+ (ANSI/NISO Z39.96-2019).
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+
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+ The file names and formal public identifiers have been
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+ changed in the modules and the catalogs.
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+
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+ 19. JATS 'v1.3d2 20201130' becomes 'v1.3 20210610'
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+ (final ANSI vote date)
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+ 'ANSI/NISO Z39.96-2019' becomes 'ANSI/NISO Z39.96-2021'
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+
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+ ==============================================================
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+ JATS Version 1.3d2 (ANSI/NISO Z39.96-2021)
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+ (DAL/BTU) v1.3d2 (2020-11-30)
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+
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+ ANSI NISO JATS is a continuing maintenance NISO Standard,
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+ which requires voting by the NISO and ANSI memberships
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+ to be changed.
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+
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+ This draft DTD represents an interim version of the
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+ non-normative JATS DTD Suite, as an indication to JATS users
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+ of the decisions that have been made by the JATS Standing
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+ Committee. This draft has not yet been given public review
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+ or voting; it is for Standing Committee review and
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+ testing. The formal public identifiers have been changed
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+ in the modules and the catalogs.
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+
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+ 18. JATS "v1.3d2 20201130" becomes 'v1.3 20210610' (second
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+ committee draft following the final ANSI/NISO 1.2 vote)
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+
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+ ==============================================================
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+ JATS Version 1.3d1 (ANSI/NISO Z39.96-2021)
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+ (DAL/BTU) v1.3.d1 (2019-08-31)
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+
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+ ANSI NISO JATS is a continuing maintenance NISO Standard,
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+ which requires voting by the NISO and ANSI memberships
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+ to be changed.
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+
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+ This draft DTD represents an interim version of the
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+ non-normative JATS DTD Suite, as an indication to JATS users
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+ of the decisions that have been made by the JATS Standing
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+ Committee. This draft has not yet been given public review
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+ or voting. The formal public identifiers were changed in the
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+ modules and the catalogs.
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+
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+ 17. JATS "1.2" becomes "v1.3d1 20190831" (first committee
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+ draft following the final ANSI/NISO vote)
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+
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+ ==============================================================
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+ JATS Version 1.2 (ANSI/NISO Z39.96-2021)
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+ (DAL/BTU) v1.2 (2019-02-08)
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+
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+ NISO JATS is a continuing maintenance NISO Standard, which
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+ requires voting by the both the NISO and ANSI membership
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+ to be changed. This version of the NISO JATS was approved
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+ by ANSI vote on Feb 08, 2019, so it supersedes all Committee
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+ Drafts as well as the draft version JATS 1.2 2018 (the version
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+ submitted for vote), becoming NISO JATS v1.2 20190208
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+ (ANSI/NISO Z39.96-2021).
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+
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+ 16. JATS "1.2" becomes "v1.2 20190208" (final ANSI vote date)
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+ "ANSI/NISO Z39.96-2015" becomes "ANSI/NISO Z39.96-2019"
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+
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+ ==============================================================
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+ JATS Version 1.2 (ANSI/NISO Z39.96-2018)
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+ (DAL/BTU) v1.2 (2018-11-30)
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+
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+ NISO JATS is a continuing maintenance NISO Standard, which
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+ requires voting by the both the NISO and ANSI membership
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+ to be changed. This version of the NISO JATS was approved
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+ by ANSI and NISO vote, so it supersedes all Committee Drafts
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+ and becoming NISO JATS 1.2 (ANSI/NISO Z39.96-2018).
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+
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+ 15. JATS "1.2d2" and "v1.2d2 20180401" became
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+ JATS "1.2" and "v1.2 20181130"
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+
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+ =============================================================
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+ JATS Version 1.2d2 (DAL/BTU) v1.2d2 (2018-04-01)
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+
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+ JATS is a continuing maintenance NISO Standard, which
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+ requires voting by the ANSI and NISO memberships to be changed.
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+ BITS is under continuous maintenance, and is modified at the
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+ discretion of the working group.
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+
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+ This draft DTD represents an interim version of the
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+ non-normative JATS DTD Suite, as an indication to JATS users
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+ the decisions that have been made by the JATS Standing
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+ Committee. This draft has not yet been given public review
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+ or voting. The formal public identifiers were changed in the
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+ modules and the catalogs.
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+
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+ 14. BITS "2.0" and "v2.0 20151225" remain unchanged
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+
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+ JATS "1.2d1" and "v1.2d1 20171231" became
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+ JATS "1.2d2" and "v1.2d2 20180401".
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+
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+ No module names were changed.
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+
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+ =============================================================
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+ JATS Version 1.2d1 (ANSI/NISO Z39.96-2015)
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+ (DAL/BTU) v1.2d1 (2017-12-31)
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+
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+ NISO JATS is a continuing maintenance NISO Standard, which
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+ requires voting by the ANSI and NISO memberships to be changed.
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+
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+ This draft DTD represents an interim version of the
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+ non-normative JATS DTD Suite, as an indication to JATS users
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+ the decisions that have been made by the JATS Standing
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+ Committee. This draft has not yet been given public review
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+ or voting. The formal public identifiers were changed in the
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+ modules and the catalogs.
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+
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+ 13. JATS "1.2d1" and "v1.2d1 20170631" became
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+ JATS "1.2d1" and "v1.2d1 20171231".
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+
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+ =============================================================
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+ JATS Version 1.2d1 (DAL/BTU) v1.2d1 (2017-06-31)
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+
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+ NISO JATS is a continuing maintenance NISO Standard, which
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+ requires voting by the ANSI and NISO memberships to be changed.
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+
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+ This draft DTD represents an interim version of the
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+ non-normative JATS DTD Suite, as an indication to JATS users
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+ the decisions that have been made by the JATS Standing
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+ Committee. This draft has not yet been given public review
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+ or voting. The formal public identifiers were changed in the
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+ modules and the catalogs.
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+
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+ 12. JATS became version "1.2d1" and "v1.2d1 20170631"
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+
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+ =============================================================
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+ JATS Version 1.1 (DAL/BTU) v1.1 (2015-12-15)
246
+
247
+ JATS is a continuing maintenance NISO Standard, which
248
+ requires voting by the ANSI and NISO memberships to be changed.
249
+ JATS 1.1 was approved in late 2015, so the formal public
250
+ identifiers were changed in the modules and the catalogs.
251
+ No model or attribute changes were made at this time.
252
+
253
+ 11. JATS became version "1.1" and "v1.1 20151215"
254
+ BITS remained version "2.0" but becomes "v2.0 20151225"
255
+
256
+ =============================================================
257
+ JATS Version 1.1d3 (DAL/BTU) v1.1d3 (2015-03-01)
258
+
259
+ The changes in this release are in response to NISO
260
+ License and Indicators Recommended Practice.
261
+
262
+ NISO JATS is a continuing maintenance NISO Standard, which
263
+ requires voting by the NISO membership to be changed. This
264
+ Committee Draft 1.1d3 will be sent to the NISO voting
265
+ membership, to become (if approved) NISO JATS 1.1.
266
+
267
+ This draft DTD represents an interim version of the
268
+ non-normative JATS DTD Suite, as an indication to JATS users
269
+ the decisions that have been made by the JATS Standing
270
+ Committee.
271
+
272
+ 10. JATS became version "1.1d3" and "v1.1 20150301//EN"
273
+
274
+ =============================================================
275
+ JATS Version 1.1d2 (DAL/BTU) v1.1d2 (2014-09-30)
276
+
277
+ NISO JATS is a continuing maintenance NISO Standard, which
278
+ requires voting by the NISO membership to be changed. This
279
+ Committee Draft 1.1d2 will be sent to the NISO voting
280
+ membership, to become (if approved) NISO JATS 1.1.
281
+
282
+ This catalog represents an interim version of the
283
+ non-normative JATS DTD Suite, as an indication to JATS users
284
+ the decisions that have been made by the JATS Standing
285
+ Committee.
286
+
287
+ 9. JATS became version "1.1d2" and "v1.1d2 20140930//EN"
288
+
289
+ =============================================================
290
+ NISO JATS Version 1.1d1 (DAL/BTU) v1.1 (2013-11-15)
291
+
292
+ ANSI/NISO Z39.96-2012 (pre-release for V1.0 BITS; Version 1.1d1)
293
+
294
+ NISO JATS Standing Committee met and answered the requests and
295
+ suggestions from the NISO request forms.
296
+
297
+ Details concerning ANSI/NISO Z39.96-2012 JATS-based DTDs,
298
+ XSDs, RNGs and supporting documentation are available at
299
+ http://jats.nlm.nih.gov/1.3d2/
300
+
301
+ 8. GLOBAL ATTRIBUTES - Added the new parameter entity
302
+ %jats-common-atts;
303
+ to every element in this module. This PE adds (for now) the
304
+ @id attribute and the @xml:base attribute to every element,
305
+ whether metadata or narrative.
306
+ Since the @id in this parameter entity is optional, a second
307
+ parameter entity jats-common-atts-id-required was also added.
308
+ The two are kept in sync with the jats-base-atts parameter
309
+ entity.
310
+
311
+ =============================================================
312
+ NISO JATS Version 1.0 (DAL/BTU) v1.0 (2012-xx-xx)
313
+
314
+ ANSI/NISO Z39.96-2012 (Version 1.0)
315
+
316
+ Details concerning ANSI/NISO Z39.96-2012 JATS-based DTDs,
317
+ XSDs, RNGs and supporting documentation are available at
318
+ http://jats.nlm.nih.gov/1.3d2/
319
+
320
+ 7. Updated the DTD-version attribute to "1.0" and the formal
321
+ public identifier to the date: "v1.0 20120330//EN".
322
+
323
+ =============================================================
324
+ Version 0.4 (DAL/BTU) v0.4 (2011-01-31)
325
+
326
+ This Tag Set is in the process of becoming a NISO standard.
327
+ The version numbers are starting over from 0.4", as a Trial
328
+ Use Draft, to be made into "Version 1.0" when the Tag Suite
329
+ becomes a NISO standard. Thus, the version number that would
330
+ have been "NLM Version 3.1 Draft" has become NISO JATS
331
+ "Version 0.4".
332
+
333
+ Details on NISO Trial Use Draft Version 0.4 are available at
334
+ http://jats.nlm.nih.gov/JATS-0.4.
335
+
336
+ 6. Updated the DTD-version attribute to "0.4"
337
+
338
+ 5. Updated the public identifier to "v0.4 20110131",
339
+ modified the formal public identifier to include "JATS (Z39.96)",
340
+ and the filename as delivered to include "JATS" and the
341
+ new version number "0".
342
+
343
+ 4. @SPECIFIC-USE and @XML:LANG - Added the @specific-use and
344
+ @xml:lang to the following elements:
345
+ - private-char through private-char-atts (@specific-use)
346
+
347
+ 3. PEs FOR CONTENT MODELS - Added parameter entity redefinitions
348
+ for the model of the <private-char> element.
349
+
350
+ 2. PEs FOR ATTLISTS - Added parameter entity redefinitions for the
351
+ attribute lists of the following elements: (no attributes or
352
+ values were changed)
353
+ - glyph-ref glyph-ref-atts
354
+ - glyph-data glyph-data-atts
355
+ - private-char private-char-atts
356
+
357
+ =============================================================
358
+ Version 3.0 (DAL/BTU) v3.0 (2007-10-31)
359
+
360
+ Version 3.0 is the first non-backward-compatible release.
361
+ In addition to the usual incremental changes, some
362
+ elements and attributes have been renamed and/or remodeled
363
+ to better meet user needs and to increase tag set consistency.
364
+ All module change histories are available through the Tag Suite
365
+ web site at http://dtd.nlm.nih.gov.
366
+
367
+ Details on version 3.0 are available at
368
+ http://dtd.nlm.nih.gov/3.0.
369
+
370
+ 1. Updated public identifier to "v3.0 20071031//EN" -->
371
+
372
+ <!-- ============================================================= -->
373
+ <!-- Details concerning
374
+ ANSI/NISO Z39.96-2015 JATS-based DTDs, XSDs,
375
+ RNGs and supporting documentation are available at
376
+ http://jats.nlm.nih.gov/1.1/ -->
377
+ <!-- ============================================================= -->
378
+ <!-- DESIGN COMMENT -->
379
+ <!-- ============================================================= -->
380
+ <!-- This DTD Suite has been designed with Unicode
381
+ as the basic representation of all special
382
+ characters. The use of combining characters
383
+ is supported and encouraged as is the use
384
+ of entities defined by the STIX project
385
+ (http://www.ams.org/STIX/). Unicode values
386
+ in planes other than Plane 0 may be freely
387
+ used.
388
+
389
+ Use of private publisher entities and Unicode
390
+ Private Use Area is discouraged, but supported
391
+ with the <private-char> element, for which a
392
+ corresponding bitmap must be submitted.
393
+
394
+ In cases where an entity name has been generally
395
+ accepted with a corresponding Unicode number
396
+ and the entity has not been added to
397
+ the ISO standard entity sets, a named entity
398
+ may be defined below (e.g. &euro;).
399
+
400
+ Because of the potential for conflicts in
401
+ assignments by different publishers,
402
+ the JATS DTD Suite does not support assignment
403
+ of values in the Unicode Private Use Area.
404
+ Publishers who have defined characters in the
405
+ Private Use Area must remap those characters
406
+ to existing Unicode values (using combining
407
+ characters for special accented characters
408
+ where appropriate), or must submit bitmaps of
409
+ those characters using one of the two methods
410
+ supported under the <private-char> element.
411
+
412
+ Those custom publisher entities for which
413
+ corresponding Unicode values have not been
414
+ determined must be tagged with the
415
+ <private-char> element. Publishers must submit
416
+ bitmaps of those characters using one of the
417
+ two methods supported in the <private-char>
418
+ element. -->
419
+
420
+ <!-- ============================================================= -->
421
+ <!-- COMMONLY ACCEPTED ENTITIES FOR UNICODE
422
+ GLYPHS -->
423
+ <!-- ============================================================= -->
424
+
425
+ <!-- For each of the following entities a name
426
+ and a Unicode numerical character reference
427
+ is given. Where a unique Unicode character
428
+ could be determined, that character was used.
429
+ For some of the symbols combining characters
430
+ have been used. Do not use this space to
431
+ redefine characters already found in standard
432
+ ISO entity sets. Do not use this space to
433
+ define any character that cannot be
434
+ represented with Unicode. -->
435
+
436
+ <!-- LATIN SMALL LETTER G WITH CARON -->
437
+ <!ENTITY gcaron "&#x01E7;" >
438
+
439
+
440
+ <!-- LATIN CAPITAL LETTER H WITH MACRON -->
441
+ <!ENTITY Hmacr "&#x0048;&#x0304;" >
442
+
443
+
444
+ <!-- EURO CURRENCY -->
445
+ <!ENTITY euro "&#x20AC;" >
446
+
447
+
448
+ <!-- FRANC CURRENCY -->
449
+ <!ENTITY franc "&#x20A3;" >
450
+
451
+
452
+ <!-- ============================================================= -->
453
+ <!-- ATTRIBUTE LISTS FOR PRIVATE CHARACTERS -->
454
+ <!-- ============================================================= -->
455
+
456
+
457
+ <!-- GLYPH DATA ATTRIBUTES -->
458
+ <!-- Attribute list for the <glyph-data>
459
+ element -->
460
+ <!ENTITY % glyph-data-atts
461
+ "%jats-common-atts;
462
+ fontchar CDATA #IMPLIED
463
+ fontname CDATA #IMPLIED
464
+ format NMTOKEN #IMPLIED
465
+ resolution CDATA #IMPLIED
466
+ xml:space (preserve) #FIXED 'preserve'
467
+ x-size CDATA #IMPLIED
468
+ y-size CDATA #IMPLIED" >
469
+
470
+
471
+ <!-- GLYPH REFERENCE ATTRIBUTES -->
472
+ <!-- Attribute list for the <glyph-ref>
473
+ element -->
474
+ <!ENTITY % glyph-ref-atts
475
+ "%jats-common-atts;
476
+ glyph-data IDREF #IMPLIED" >
477
+
478
+
479
+ <!-- PRIVATE USE AREA AND CUSTOM CHARACTERS
480
+ ATTRIBUTES -->
481
+ <!-- Attribute list for the <private-char>
482
+ element -->
483
+ <!ENTITY % private-char-atts
484
+ "%jats-common-atts;
485
+ description
486
+ CDATA #IMPLIED
487
+ name CDATA #IMPLIED
488
+ specific-use
489
+ CDATA #IMPLIED" >
490
+
491
+
492
+ <!-- ============================================================= -->
493
+ <!-- PRIVATE USE AREA AND CUSTOM CHARACTERS -->
494
+ <!-- ============================================================= -->
495
+ <!--
496
+ Special characters defined by publishers as
497
+ custom entities or in the Unicode Private Use
498
+ Area may not be deposited as is. If they
499
+ cannot be remapped to existing Unicode values,
500
+ they must be submitted as a bitmap using
501
+ the <private-char> element. The most
502
+ repository-friendly technique is <glyph-data>
503
+ although individual bitmap files may be
504
+ submitted with inline-graphic.
505
+
506
+ We would like to thank Beacon Publishing and
507
+ the APS (American Physical Society) for
508
+ providing us with this technique. -->
509
+
510
+
511
+ <!-- PRIVATE CHARACTER MODEL -->
512
+ <!-- The content model for the <private-char>
513
+ element -->
514
+ <!ENTITY % private-char-model
515
+ "((glyph-data | glyph-ref) | inline-graphic*)"
516
+ >
517
+
518
+
519
+ <!-- PRIVATE CHARACTER (CUSTOM OR UNICODE) -->
520
+ <!-- A custom character entity defined by a
521
+ publisher or a custom character from the
522
+ Unicode private-use area for which a bitmap
523
+ is submitted for the glyph.
524
+
525
+ Since there are no completely standard/public
526
+ agreements on how such characters are to be
527
+ named and displayed, this technique is to be
528
+ used instead of a custom general entity
529
+ reference, to provide complete information
530
+ on the intended character.
531
+ A document should contain a <private-char>
532
+ element at each location where a private
533
+ character is used within the document. The
534
+ corresponding image for the glyph may be
535
+ given in the <glyph-data> element or as an
536
+ external bitmap file referenced by an
537
+ <inline-graphic> element.
538
+
539
+ Implementation Note: <inline-graphic> should
540
+ only be used outside <private-char> when the
541
+ graphic is something other than a special
542
+ character.
543
+ Details at:
544
+ http://jats.nlm.nih.gov/archiving/tag-library/1.3/index.html?elem=private-char
545
+ http://jats.nlm.nih.gov/publishing/tag-library/1.3/index.html?elem=private-char
546
+ http://jats.nlm.nih.gov/articleauthoring/tag-library/1.3/index.html?elem=private-char
547
+ -->
548
+ <!ELEMENT private-char %private-char-model; >
549
+ <!-- description
550
+ A human-readable description of the
551
+ character, for example, "Arrow, normal
552
+ weight, single line, two-headed, Northwest
553
+ to Southeast".
554
+ name Unique name for the character in all
555
+ uppercase ASCII, similar to names found
556
+ in Unicode standard (e.g., "NORTHWEST
557
+ SOUTHEAST ARROW" -->
558
+ <!ATTLIST private-char
559
+ %private-char-atts; >
560
+
561
+
562
+ <!-- GLYPH DATA FOR A PRIVATE CHARACTER -->
563
+ <!-- This element is used when there is known to
564
+ be no font available to render the private
565
+ character. The <glyph-data> element can be
566
+ used to provide information on the actual
567
+ glyph that is associated with the private-use
568
+ character. The element includes an inline
569
+ bitmap of the glyph encoded in plain
570
+ PBM (Plain Bit Map) format so that it is
571
+ human-readable.
572
+
573
+ For example:
574
+ <private-char name="NORTHWEST SOUTHEAST ARROW"
575
+ description="Arrow, normal weight, single
576
+ line, two-headed, Northwest to Southeast">
577
+ <glyph-data format="PBM" resolution="300"
578
+ x-size="34" y-size="34">
579
+ 0000000000000000000000000000000000
580
+ 0111111111111100000000000000000000
581
+ 0111111111111100000000000000000000
582
+ 0111110000000000000000000000000000
583
+ 0111110000000000000000000000000000
584
+ 0111111000000000000000000000000000
585
+ 0110111100000000000000000000000000
586
+ 0110011110000000000000000000000000
587
+ 0110001111000000000000000000000000
588
+ 0110000111100000000000000000000000
589
+ 0110000011110000000000000000000000
590
+ 0110000001111000000000000000000000
591
+ 0110000000111100000000000000000000
592
+ 0110000000011110000000000000000000
593
+ 0110000000001111000000000000000000
594
+ 0110000000000111100000000000000000
595
+ 0110000000000011110000000000000000
596
+ 0000000000000001111000000000000000
597
+ 0000000000000000111100000000000110
598
+ 0000000000000000011110000000000110
599
+ 0000000000000000001111000000000110
600
+ 0000000000000000000111100000000110
601
+ 0000000000000000000011110000000110
602
+ 0000000000000000000001111000000110
603
+ 0000000000000000000000111100000110
604
+ 0000000000000000000000011110000110
605
+ 0000000000000000000000001111000110
606
+ 0000000000000000000000000111100110
607
+ 0000000000000000000000000011110110
608
+ 0000000000000000000000000001111110
609
+ 0000000000000000000000000001111110
610
+ 0000000000000000011111111111111110
611
+ 0000000000000000011111111111111110
612
+ 0000000000000000000000000000000000
613
+ </glyph-data></private-char>
614
+ Details at:
615
+ http://jats.nlm.nih.gov/archiving/tag-library/1.3/index.html?elem=glyph-data
616
+ http://jats.nlm.nih.gov/publishing/tag-library/1.3/index.html?elem=glyph-data
617
+ http://jats.nlm.nih.gov/articleauthoring/tag-library/1.3/index.html?elem=glyph-data
618
+ -->
619
+ <!ELEMENT glyph-data (#PCDATA) >
620
+ <!-- id Identifier so that the full glyph data need
621
+ not be repeated every time the character is
622
+ used. The <glyph-ref> element can be used
623
+ to point to this ID, to reuse a character
624
+ in subsequent text.
625
+ fontchar The offset of the character into a glyph
626
+ table, such as a Unicode character.
627
+ fontname The name of the character
628
+ format Names the image format of the bitmap. Should
629
+ be "PBM" if the plain bitmap is included
630
+ inline.
631
+ resolution Resolution of the bitmap in dots per inch,
632
+ expressed as a decimal integer (e.g. 72, 300)
633
+ xml:space Preserve whitespace within this element.
634
+ x-size Number of pixels per row in the bit-mapped
635
+ glyph
636
+ y-size Number of rows of the bit-mapped glyph -->
637
+ <!ATTLIST glyph-data
638
+ %glyph-data-atts; >
639
+
640
+
641
+ <!-- GLYPH REFERENCE FOR A PRIVATE CHARACTER -->
642
+ <!-- Once a private character has been declared
643
+ using a <glyph-data> element, the character
644
+ can be reused by using this element to
645
+ point to the full <glyph-data> element.
646
+ The pointing uses the ID/IDREF mechanism,
647
+ using the "glyph-data" attribute of this
648
+ element to point to the "id" attribute of
649
+ another <glyph-data> element.
650
+ Details at:
651
+ http://jats.nlm.nih.gov/archiving/tag-library/1.3/index.html?elem=glyph-ref
652
+ http://jats.nlm.nih.gov/publishing/tag-library/1.3/index.html?elem=glyph-ref
653
+ http://jats.nlm.nih.gov/articleauthoring/tag-library/1.3/index.html?elem=glyph-ref
654
+ -->
655
+ <!ELEMENT glyph-ref EMPTY >
656
+ <!-- glyph-data An IDREF-type attribute that points to the
657
+ "id" attribute of a <glyph-data> character.
658
+ The idea is to use the full glyph data once,
659
+ then point to an existing character instead
660
+ of repeating the entire glyph data again. -->
661
+ <!ATTLIST glyph-ref
662
+ %glyph-ref-atts; >
663
+
664
+ <!-- ================== End Custom XML Special Characters ======== -->