@pga-ai/core 0.4.0 → 0.8.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (183) hide show
  1. package/README.md +7 -7
  2. package/dist/PGA.d.ts +100 -1
  3. package/dist/PGA.d.ts.map +1 -1
  4. package/dist/PGA.js +1015 -25
  5. package/dist/PGA.js.map +1 -1
  6. package/dist/advanced-ai/AgentVitals.d.ts +23 -0
  7. package/dist/advanced-ai/AgentVitals.d.ts.map +1 -0
  8. package/dist/advanced-ai/AgentVitals.js +13 -0
  9. package/dist/advanced-ai/AgentVitals.js.map +1 -0
  10. package/dist/advanced-ai/CalibratedAutonomy.d.ts +37 -0
  11. package/dist/advanced-ai/CalibratedAutonomy.d.ts.map +1 -0
  12. package/dist/advanced-ai/CalibratedAutonomy.js +151 -0
  13. package/dist/advanced-ai/CalibratedAutonomy.js.map +1 -0
  14. package/dist/advanced-ai/EmotionalModel.d.ts +27 -0
  15. package/dist/advanced-ai/EmotionalModel.d.ts.map +1 -0
  16. package/dist/advanced-ai/EmotionalModel.js +206 -0
  17. package/dist/advanced-ai/EmotionalModel.js.map +1 -0
  18. package/dist/advanced-ai/EnhancedSelfModel.d.ts +53 -0
  19. package/dist/advanced-ai/EnhancedSelfModel.d.ts.map +1 -0
  20. package/dist/advanced-ai/EnhancedSelfModel.js +189 -0
  21. package/dist/advanced-ai/EnhancedSelfModel.js.map +1 -0
  22. package/dist/advanced-ai/SelfModel.d.ts +29 -0
  23. package/dist/advanced-ai/SelfModel.d.ts.map +1 -0
  24. package/dist/advanced-ai/SelfModel.js +91 -0
  25. package/dist/advanced-ai/SelfModel.js.map +1 -0
  26. package/dist/advanced-ai/StrategicAutonomy.d.ts +41 -0
  27. package/dist/advanced-ai/StrategicAutonomy.d.ts.map +1 -0
  28. package/dist/advanced-ai/StrategicAutonomy.js +148 -0
  29. package/dist/advanced-ai/StrategicAutonomy.js.map +1 -0
  30. package/dist/core/GenesisBootstrap.d.ts +18 -0
  31. package/dist/core/GenesisBootstrap.d.ts.map +1 -0
  32. package/dist/core/GenesisBootstrap.js +95 -0
  33. package/dist/core/GenesisBootstrap.js.map +1 -0
  34. package/dist/core/GenomeManager.js +1 -1
  35. package/dist/core/PromptAssembler.d.ts +26 -0
  36. package/dist/core/PromptAssembler.d.ts.map +1 -1
  37. package/dist/core/PromptAssembler.js +133 -8
  38. package/dist/core/PromptAssembler.js.map +1 -1
  39. package/dist/evaluation/BenchmarkSuites.d.ts +2 -0
  40. package/dist/evaluation/BenchmarkSuites.d.ts.map +1 -1
  41. package/dist/evaluation/BenchmarkSuites.js +9 -6
  42. package/dist/evaluation/BenchmarkSuites.js.map +1 -1
  43. package/dist/evaluation/Evaluator.d.ts.map +1 -1
  44. package/dist/evaluation/Evaluator.js +8 -7
  45. package/dist/evaluation/Evaluator.js.map +1 -1
  46. package/dist/evaluation/ProofOfValueRunner.d.ts +41 -0
  47. package/dist/evaluation/ProofOfValueRunner.d.ts.map +1 -0
  48. package/dist/evaluation/ProofOfValueRunner.js +177 -0
  49. package/dist/evaluation/ProofOfValueRunner.js.map +1 -0
  50. package/dist/evaluation/SandboxSuites.js +4 -4
  51. package/dist/evaluation/SandboxSuites.js.map +1 -1
  52. package/dist/evaluation/fixtures/proof-of-value-v1.json +178 -0
  53. package/dist/evolution/MutationOperator.d.ts +26 -0
  54. package/dist/evolution/MutationOperator.d.ts.map +1 -1
  55. package/dist/evolution/MutationOperator.js +200 -9
  56. package/dist/evolution/MutationOperator.js.map +1 -1
  57. package/dist/evolution/PurposeSurvival.d.ts +68 -0
  58. package/dist/evolution/PurposeSurvival.d.ts.map +1 -0
  59. package/dist/evolution/PurposeSurvival.js +199 -0
  60. package/dist/evolution/PurposeSurvival.js.map +1 -0
  61. package/dist/evolution/boost/EvolutionBoostEngine.d.ts +2 -1
  62. package/dist/evolution/boost/EvolutionBoostEngine.d.ts.map +1 -1
  63. package/dist/evolution/boost/EvolutionBoostEngine.js +3 -3
  64. package/dist/evolution/boost/EvolutionBoostEngine.js.map +1 -1
  65. package/dist/evolution/boost/GeneticRecombinator.d.ts.map +1 -1
  66. package/dist/evolution/boost/GeneticRecombinator.js +16 -5
  67. package/dist/evolution/boost/GeneticRecombinator.js.map +1 -1
  68. package/dist/evolution/boost/ParetoOptimizer.d.ts +1 -1
  69. package/dist/evolution/boost/ParetoOptimizer.d.ts.map +1 -1
  70. package/dist/evolution/boost/ParetoOptimizer.js.map +1 -1
  71. package/dist/evolution/boost/operators/BreakthroughOperator.d.ts +4 -7
  72. package/dist/evolution/boost/operators/BreakthroughOperator.d.ts.map +1 -1
  73. package/dist/evolution/boost/operators/BreakthroughOperator.js +172 -160
  74. package/dist/evolution/boost/operators/BreakthroughOperator.js.map +1 -1
  75. package/dist/evolution/boost/operators/CrossoverMutationOperator.d.ts +10 -15
  76. package/dist/evolution/boost/operators/CrossoverMutationOperator.d.ts.map +1 -1
  77. package/dist/evolution/boost/operators/CrossoverMutationOperator.js +167 -120
  78. package/dist/evolution/boost/operators/CrossoverMutationOperator.js.map +1 -1
  79. package/dist/evolution/boost/operators/PatternExtractionOperator.d.ts +7 -10
  80. package/dist/evolution/boost/operators/PatternExtractionOperator.d.ts.map +1 -1
  81. package/dist/evolution/boost/operators/PatternExtractionOperator.js +167 -164
  82. package/dist/evolution/boost/operators/PatternExtractionOperator.js.map +1 -1
  83. package/dist/evolution/boost/operators/SemanticRestructuringOperator.d.ts +2 -3
  84. package/dist/evolution/boost/operators/SemanticRestructuringOperator.d.ts.map +1 -1
  85. package/dist/evolution/boost/operators/SemanticRestructuringOperator.js +136 -54
  86. package/dist/evolution/boost/operators/SemanticRestructuringOperator.js.map +1 -1
  87. package/dist/evolution/boost/utils/llmHelper.d.ts +10 -0
  88. package/dist/evolution/boost/utils/llmHelper.d.ts.map +1 -0
  89. package/dist/evolution/boost/utils/llmHelper.js +13 -0
  90. package/dist/evolution/boost/utils/llmHelper.js.map +1 -0
  91. package/dist/firewall/ContentFirewall.d.ts +30 -0
  92. package/dist/firewall/ContentFirewall.d.ts.map +1 -0
  93. package/dist/firewall/ContentFirewall.js +251 -0
  94. package/dist/firewall/ContentFirewall.js.map +1 -0
  95. package/dist/firewall/DefaultPatterns.d.ts +8 -0
  96. package/dist/firewall/DefaultPatterns.d.ts.map +1 -0
  97. package/dist/firewall/DefaultPatterns.js +623 -0
  98. package/dist/firewall/DefaultPatterns.js.map +1 -0
  99. package/dist/firewall/index.d.ts +3 -0
  100. package/dist/firewall/index.d.ts.map +1 -0
  101. package/dist/firewall/index.js +3 -0
  102. package/dist/firewall/index.js.map +1 -0
  103. package/dist/gene-bank/CognitiveGene.d.ts +106 -106
  104. package/dist/gene-bank/GeneAdopter.d.ts +1 -0
  105. package/dist/gene-bank/GeneAdopter.d.ts.map +1 -1
  106. package/dist/gene-bank/GeneAdopter.js +23 -4
  107. package/dist/gene-bank/GeneAdopter.js.map +1 -1
  108. package/dist/gene-bank/GeneBank.d.ts +6 -6
  109. package/dist/gene-bank/GeneExtractor.d.ts +4 -4
  110. package/dist/gene-bank/MarketplaceClient.d.ts +26 -0
  111. package/dist/gene-bank/MarketplaceClient.d.ts.map +1 -0
  112. package/dist/gene-bank/MarketplaceClient.js +147 -0
  113. package/dist/gene-bank/MarketplaceClient.js.map +1 -0
  114. package/dist/gene-bank/SandboxTester.d.ts +2 -2
  115. package/dist/gene-bank/adapters/PostgresGeneStorage.js +1 -1
  116. package/dist/gene-bank/adapters/PostgresGeneStorage.js.map +1 -1
  117. package/dist/gene-bank/index.d.ts +1 -0
  118. package/dist/gene-bank/index.d.ts.map +1 -1
  119. package/dist/gene-bank/index.js +1 -0
  120. package/dist/gene-bank/index.js.map +1 -1
  121. package/dist/index.d.ts +54 -8
  122. package/dist/index.d.ts.map +1 -1
  123. package/dist/index.js +33 -5
  124. package/dist/index.js.map +1 -1
  125. package/dist/interfaces/StorageAdapter.d.ts +4 -1
  126. package/dist/interfaces/StorageAdapter.d.ts.map +1 -1
  127. package/dist/memory/AnalyticMemoryEngine.d.ts +83 -0
  128. package/dist/memory/AnalyticMemoryEngine.d.ts.map +1 -0
  129. package/dist/memory/AnalyticMemoryEngine.js +372 -0
  130. package/dist/memory/AnalyticMemoryEngine.js.map +1 -0
  131. package/dist/memory/LayeredMemory.d.ts +2 -0
  132. package/dist/memory/LayeredMemory.d.ts.map +1 -1
  133. package/dist/memory/LayeredMemory.js +2 -0
  134. package/dist/memory/LayeredMemory.js.map +1 -1
  135. package/dist/memory/PatternMemory.d.ts +38 -0
  136. package/dist/memory/PatternMemory.d.ts.map +1 -0
  137. package/dist/memory/PatternMemory.js +161 -0
  138. package/dist/memory/PatternMemory.js.map +1 -0
  139. package/dist/memory/PersonalNarrative.d.ts +51 -0
  140. package/dist/memory/PersonalNarrative.d.ts.map +1 -0
  141. package/dist/memory/PersonalNarrative.js +172 -0
  142. package/dist/memory/PersonalNarrative.js.map +1 -0
  143. package/dist/monitoring/AlertWebhooks.d.ts.map +1 -1
  144. package/dist/monitoring/AlertWebhooks.js +8 -5
  145. package/dist/monitoring/AlertWebhooks.js.map +1 -1
  146. package/dist/monitoring/MonitoringDashboard.js +1 -1
  147. package/dist/reasoning/Metacognition.d.ts +47 -0
  148. package/dist/reasoning/Metacognition.d.ts.map +1 -0
  149. package/dist/reasoning/Metacognition.js +274 -0
  150. package/dist/reasoning/Metacognition.js.map +1 -0
  151. package/dist/types/GenomeV2.d.ts +95 -0
  152. package/dist/types/GenomeV2.d.ts.map +1 -1
  153. package/dist/types/index.d.ts +159 -0
  154. package/dist/types/index.d.ts.map +1 -1
  155. package/dist/utils/tokens.d.ts +4 -0
  156. package/dist/utils/tokens.d.ts.map +1 -0
  157. package/dist/utils/tokens.js +16 -0
  158. package/dist/utils/tokens.js.map +1 -0
  159. package/dist/wrap/FunctionLLMAdapter.d.ts +9 -0
  160. package/dist/wrap/FunctionLLMAdapter.d.ts.map +1 -0
  161. package/dist/wrap/FunctionLLMAdapter.js +26 -0
  162. package/dist/wrap/FunctionLLMAdapter.js.map +1 -0
  163. package/dist/wrap/GenomeBuilder.d.ts +13 -0
  164. package/dist/wrap/GenomeBuilder.d.ts.map +1 -0
  165. package/dist/wrap/GenomeBuilder.js +222 -0
  166. package/dist/wrap/GenomeBuilder.js.map +1 -0
  167. package/dist/wrap/InMemoryStorageAdapter.d.ts +61 -0
  168. package/dist/wrap/InMemoryStorageAdapter.d.ts.map +1 -0
  169. package/dist/wrap/InMemoryStorageAdapter.js +153 -0
  170. package/dist/wrap/InMemoryStorageAdapter.js.map +1 -0
  171. package/dist/wrap/WrapOptions.d.ts +45 -0
  172. package/dist/wrap/WrapOptions.d.ts.map +1 -0
  173. package/dist/wrap/WrapOptions.js +2 -0
  174. package/dist/wrap/WrapOptions.js.map +1 -0
  175. package/dist/wrap/WrappedAgent.d.ts +77 -0
  176. package/dist/wrap/WrappedAgent.d.ts.map +1 -0
  177. package/dist/wrap/WrappedAgent.js +142 -0
  178. package/dist/wrap/WrappedAgent.js.map +1 -0
  179. package/dist/wrap/index.d.ts +6 -0
  180. package/dist/wrap/index.d.ts.map +1 -0
  181. package/dist/wrap/index.js +5 -0
  182. package/dist/wrap/index.js.map +1 -0
  183. package/package.json +13 -10
@@ -81,17 +81,18 @@ export declare const GeneContentSchema: z.ZodObject<{
81
81
  contraindications: z.ZodDefault<z.ZodArray<z.ZodString, "many">>;
82
82
  metadata: z.ZodDefault<z.ZodRecord<z.ZodString, z.ZodUnknown>>;
83
83
  }, "strip", z.ZodTypeAny, {
84
+ metadata: Record<string, unknown>;
84
85
  instruction: string;
85
86
  requiredCapabilities: string[];
86
87
  applicableContexts: string[];
87
88
  contraindications: string[];
88
- metadata: Record<string, unknown>;
89
89
  examples?: {
90
90
  scenario: string;
91
91
  expectedBehavior: string;
92
92
  }[] | undefined;
93
93
  }, {
94
94
  instruction: string;
95
+ metadata?: Record<string, unknown> | undefined;
95
96
  examples?: {
96
97
  scenario: string;
97
98
  expectedBehavior: string;
@@ -99,7 +100,6 @@ export declare const GeneContentSchema: z.ZodObject<{
99
100
  requiredCapabilities?: string[] | undefined;
100
101
  applicableContexts?: string[] | undefined;
101
102
  contraindications?: string[] | undefined;
102
- metadata?: Record<string, unknown> | undefined;
103
103
  }>;
104
104
  export type GeneContent = z.infer<typeof GeneContentSchema>;
105
105
  export declare const MutationContextSchema: z.ZodObject<{
@@ -141,12 +141,12 @@ export declare const TenantInfoSchema: z.ZodObject<{
141
141
  }, "strip", z.ZodTypeAny, {
142
142
  tenantId: string;
143
143
  createdBy: string;
144
- scope: "private" | "tenant" | "marketplace";
144
+ scope: "tenant" | "private" | "marketplace";
145
145
  verified: boolean;
146
146
  }, {
147
147
  tenantId: string;
148
148
  createdBy: string;
149
- scope?: "private" | "tenant" | "marketplace" | undefined;
149
+ scope?: "tenant" | "private" | "marketplace" | undefined;
150
150
  verified?: boolean | undefined;
151
151
  }>;
152
152
  export type TenantInfo = z.infer<typeof TenantInfoSchema>;
@@ -235,17 +235,18 @@ export declare const CognitiveGeneSchema: z.ZodObject<{
235
235
  contraindications: z.ZodDefault<z.ZodArray<z.ZodString, "many">>;
236
236
  metadata: z.ZodDefault<z.ZodRecord<z.ZodString, z.ZodUnknown>>;
237
237
  }, "strip", z.ZodTypeAny, {
238
+ metadata: Record<string, unknown>;
238
239
  instruction: string;
239
240
  requiredCapabilities: string[];
240
241
  applicableContexts: string[];
241
242
  contraindications: string[];
242
- metadata: Record<string, unknown>;
243
243
  examples?: {
244
244
  scenario: string;
245
245
  expectedBehavior: string;
246
246
  }[] | undefined;
247
247
  }, {
248
248
  instruction: string;
249
+ metadata?: Record<string, unknown> | undefined;
249
250
  examples?: {
250
251
  scenario: string;
251
252
  expectedBehavior: string;
@@ -253,7 +254,6 @@ export declare const CognitiveGeneSchema: z.ZodObject<{
253
254
  requiredCapabilities?: string[] | undefined;
254
255
  applicableContexts?: string[] | undefined;
255
256
  contraindications?: string[] | undefined;
256
- metadata?: Record<string, unknown> | undefined;
257
257
  }>;
258
258
  tenant: z.ZodObject<{
259
259
  tenantId: z.ZodString;
@@ -263,12 +263,12 @@ export declare const CognitiveGeneSchema: z.ZodObject<{
263
263
  }, "strip", z.ZodTypeAny, {
264
264
  tenantId: string;
265
265
  createdBy: string;
266
- scope: "private" | "tenant" | "marketplace";
266
+ scope: "tenant" | "private" | "marketplace";
267
267
  verified: boolean;
268
268
  }, {
269
269
  tenantId: string;
270
270
  createdBy: string;
271
- scope?: "private" | "tenant" | "marketplace" | undefined;
271
+ scope?: "tenant" | "private" | "marketplace" | undefined;
272
272
  verified?: boolean | undefined;
273
273
  }>;
274
274
  createdAt: z.ZodString;
@@ -276,6 +276,23 @@ export declare const CognitiveGeneSchema: z.ZodObject<{
276
276
  tags: z.ZodDefault<z.ZodArray<z.ZodString, "many">>;
277
277
  }, "strip", z.ZodTypeAny, {
278
278
  id: string;
279
+ content: {
280
+ metadata: Record<string, unknown>;
281
+ instruction: string;
282
+ requiredCapabilities: string[];
283
+ applicableContexts: string[];
284
+ contraindications: string[];
285
+ examples?: {
286
+ scenario: string;
287
+ expectedBehavior: string;
288
+ }[] | undefined;
289
+ };
290
+ tenant: {
291
+ tenantId: string;
292
+ createdBy: string;
293
+ scope: "tenant" | "private" | "marketplace";
294
+ verified: boolean;
295
+ };
279
296
  version: string;
280
297
  name: string;
281
298
  description: string;
@@ -300,28 +317,28 @@ export declare const CognitiveGeneSchema: z.ZodObject<{
300
317
  fitnessGain: number;
301
318
  }[];
302
319
  };
320
+ createdAt: string;
321
+ updatedAt: string;
322
+ tags: string[];
323
+ }, {
324
+ id: string;
303
325
  content: {
304
326
  instruction: string;
305
- requiredCapabilities: string[];
306
- applicableContexts: string[];
307
- contraindications: string[];
308
- metadata: Record<string, unknown>;
327
+ metadata?: Record<string, unknown> | undefined;
309
328
  examples?: {
310
329
  scenario: string;
311
330
  expectedBehavior: string;
312
331
  }[] | undefined;
332
+ requiredCapabilities?: string[] | undefined;
333
+ applicableContexts?: string[] | undefined;
334
+ contraindications?: string[] | undefined;
313
335
  };
314
336
  tenant: {
315
337
  tenantId: string;
316
338
  createdBy: string;
317
- scope: "private" | "tenant" | "marketplace";
318
- verified: boolean;
339
+ scope?: "tenant" | "private" | "marketplace" | undefined;
340
+ verified?: boolean | undefined;
319
341
  };
320
- createdAt: string;
321
- updatedAt: string;
322
- tags: string[];
323
- }, {
324
- id: string;
325
342
  name: string;
326
343
  description: string;
327
344
  type: "tool-usage-pattern" | "reasoning-pattern" | "communication-pattern" | "error-recovery-pattern" | "context-management" | "multi-step-workflow" | "domain-expertise";
@@ -345,23 +362,6 @@ export declare const CognitiveGeneSchema: z.ZodObject<{
345
362
  fitnessGain: number;
346
363
  }[] | undefined;
347
364
  };
348
- content: {
349
- instruction: string;
350
- examples?: {
351
- scenario: string;
352
- expectedBehavior: string;
353
- }[] | undefined;
354
- requiredCapabilities?: string[] | undefined;
355
- applicableContexts?: string[] | undefined;
356
- contraindications?: string[] | undefined;
357
- metadata?: Record<string, unknown> | undefined;
358
- };
359
- tenant: {
360
- tenantId: string;
361
- createdBy: string;
362
- scope?: "private" | "tenant" | "marketplace" | undefined;
363
- verified?: boolean | undefined;
364
- };
365
365
  createdAt: string;
366
366
  updatedAt: string;
367
367
  version?: string | undefined;
@@ -455,17 +455,18 @@ export declare const GeneExtractionResultSchema: z.ZodObject<{
455
455
  contraindications: z.ZodDefault<z.ZodArray<z.ZodString, "many">>;
456
456
  metadata: z.ZodDefault<z.ZodRecord<z.ZodString, z.ZodUnknown>>;
457
457
  }, "strip", z.ZodTypeAny, {
458
+ metadata: Record<string, unknown>;
458
459
  instruction: string;
459
460
  requiredCapabilities: string[];
460
461
  applicableContexts: string[];
461
462
  contraindications: string[];
462
- metadata: Record<string, unknown>;
463
463
  examples?: {
464
464
  scenario: string;
465
465
  expectedBehavior: string;
466
466
  }[] | undefined;
467
467
  }, {
468
468
  instruction: string;
469
+ metadata?: Record<string, unknown> | undefined;
469
470
  examples?: {
470
471
  scenario: string;
471
472
  expectedBehavior: string;
@@ -473,7 +474,6 @@ export declare const GeneExtractionResultSchema: z.ZodObject<{
473
474
  requiredCapabilities?: string[] | undefined;
474
475
  applicableContexts?: string[] | undefined;
475
476
  contraindications?: string[] | undefined;
476
- metadata?: Record<string, unknown> | undefined;
477
477
  }>;
478
478
  tenant: z.ZodObject<{
479
479
  tenantId: z.ZodString;
@@ -483,12 +483,12 @@ export declare const GeneExtractionResultSchema: z.ZodObject<{
483
483
  }, "strip", z.ZodTypeAny, {
484
484
  tenantId: string;
485
485
  createdBy: string;
486
- scope: "private" | "tenant" | "marketplace";
486
+ scope: "tenant" | "private" | "marketplace";
487
487
  verified: boolean;
488
488
  }, {
489
489
  tenantId: string;
490
490
  createdBy: string;
491
- scope?: "private" | "tenant" | "marketplace" | undefined;
491
+ scope?: "tenant" | "private" | "marketplace" | undefined;
492
492
  verified?: boolean | undefined;
493
493
  }>;
494
494
  createdAt: z.ZodString;
@@ -496,6 +496,23 @@ export declare const GeneExtractionResultSchema: z.ZodObject<{
496
496
  tags: z.ZodDefault<z.ZodArray<z.ZodString, "many">>;
497
497
  }, "strip", z.ZodTypeAny, {
498
498
  id: string;
499
+ content: {
500
+ metadata: Record<string, unknown>;
501
+ instruction: string;
502
+ requiredCapabilities: string[];
503
+ applicableContexts: string[];
504
+ contraindications: string[];
505
+ examples?: {
506
+ scenario: string;
507
+ expectedBehavior: string;
508
+ }[] | undefined;
509
+ };
510
+ tenant: {
511
+ tenantId: string;
512
+ createdBy: string;
513
+ scope: "tenant" | "private" | "marketplace";
514
+ verified: boolean;
515
+ };
499
516
  version: string;
500
517
  name: string;
501
518
  description: string;
@@ -520,28 +537,28 @@ export declare const GeneExtractionResultSchema: z.ZodObject<{
520
537
  fitnessGain: number;
521
538
  }[];
522
539
  };
540
+ createdAt: string;
541
+ updatedAt: string;
542
+ tags: string[];
543
+ }, {
544
+ id: string;
523
545
  content: {
524
546
  instruction: string;
525
- requiredCapabilities: string[];
526
- applicableContexts: string[];
527
- contraindications: string[];
528
- metadata: Record<string, unknown>;
547
+ metadata?: Record<string, unknown> | undefined;
529
548
  examples?: {
530
549
  scenario: string;
531
550
  expectedBehavior: string;
532
551
  }[] | undefined;
552
+ requiredCapabilities?: string[] | undefined;
553
+ applicableContexts?: string[] | undefined;
554
+ contraindications?: string[] | undefined;
533
555
  };
534
556
  tenant: {
535
557
  tenantId: string;
536
558
  createdBy: string;
537
- scope: "private" | "tenant" | "marketplace";
538
- verified: boolean;
559
+ scope?: "tenant" | "private" | "marketplace" | undefined;
560
+ verified?: boolean | undefined;
539
561
  };
540
- createdAt: string;
541
- updatedAt: string;
542
- tags: string[];
543
- }, {
544
- id: string;
545
562
  name: string;
546
563
  description: string;
547
564
  type: "tool-usage-pattern" | "reasoning-pattern" | "communication-pattern" | "error-recovery-pattern" | "context-management" | "multi-step-workflow" | "domain-expertise";
@@ -565,23 +582,6 @@ export declare const GeneExtractionResultSchema: z.ZodObject<{
565
582
  fitnessGain: number;
566
583
  }[] | undefined;
567
584
  };
568
- content: {
569
- instruction: string;
570
- examples?: {
571
- scenario: string;
572
- expectedBehavior: string;
573
- }[] | undefined;
574
- requiredCapabilities?: string[] | undefined;
575
- applicableContexts?: string[] | undefined;
576
- contraindications?: string[] | undefined;
577
- metadata?: Record<string, unknown> | undefined;
578
- };
579
- tenant: {
580
- tenantId: string;
581
- createdBy: string;
582
- scope?: "private" | "tenant" | "marketplace" | undefined;
583
- verified?: boolean | undefined;
584
- };
585
585
  createdAt: string;
586
586
  updatedAt: string;
587
587
  version?: string | undefined;
@@ -615,6 +615,23 @@ export declare const GeneExtractionResultSchema: z.ZodObject<{
615
615
  success: boolean;
616
616
  gene: {
617
617
  id: string;
618
+ content: {
619
+ metadata: Record<string, unknown>;
620
+ instruction: string;
621
+ requiredCapabilities: string[];
622
+ applicableContexts: string[];
623
+ contraindications: string[];
624
+ examples?: {
625
+ scenario: string;
626
+ expectedBehavior: string;
627
+ }[] | undefined;
628
+ };
629
+ tenant: {
630
+ tenantId: string;
631
+ createdBy: string;
632
+ scope: "tenant" | "private" | "marketplace";
633
+ verified: boolean;
634
+ };
618
635
  version: string;
619
636
  name: string;
620
637
  description: string;
@@ -639,23 +656,6 @@ export declare const GeneExtractionResultSchema: z.ZodObject<{
639
656
  fitnessGain: number;
640
657
  }[];
641
658
  };
642
- content: {
643
- instruction: string;
644
- requiredCapabilities: string[];
645
- applicableContexts: string[];
646
- contraindications: string[];
647
- metadata: Record<string, unknown>;
648
- examples?: {
649
- scenario: string;
650
- expectedBehavior: string;
651
- }[] | undefined;
652
- };
653
- tenant: {
654
- tenantId: string;
655
- createdBy: string;
656
- scope: "private" | "tenant" | "marketplace";
657
- verified: boolean;
658
- };
659
659
  createdAt: string;
660
660
  updatedAt: string;
661
661
  tags: string[];
@@ -672,6 +672,23 @@ export declare const GeneExtractionResultSchema: z.ZodObject<{
672
672
  success: boolean;
673
673
  gene: {
674
674
  id: string;
675
+ content: {
676
+ instruction: string;
677
+ metadata?: Record<string, unknown> | undefined;
678
+ examples?: {
679
+ scenario: string;
680
+ expectedBehavior: string;
681
+ }[] | undefined;
682
+ requiredCapabilities?: string[] | undefined;
683
+ applicableContexts?: string[] | undefined;
684
+ contraindications?: string[] | undefined;
685
+ };
686
+ tenant: {
687
+ tenantId: string;
688
+ createdBy: string;
689
+ scope?: "tenant" | "private" | "marketplace" | undefined;
690
+ verified?: boolean | undefined;
691
+ };
675
692
  name: string;
676
693
  description: string;
677
694
  type: "tool-usage-pattern" | "reasoning-pattern" | "communication-pattern" | "error-recovery-pattern" | "context-management" | "multi-step-workflow" | "domain-expertise";
@@ -695,23 +712,6 @@ export declare const GeneExtractionResultSchema: z.ZodObject<{
695
712
  fitnessGain: number;
696
713
  }[] | undefined;
697
714
  };
698
- content: {
699
- instruction: string;
700
- examples?: {
701
- scenario: string;
702
- expectedBehavior: string;
703
- }[] | undefined;
704
- requiredCapabilities?: string[] | undefined;
705
- applicableContexts?: string[] | undefined;
706
- contraindications?: string[] | undefined;
707
- metadata?: Record<string, unknown> | undefined;
708
- };
709
- tenant: {
710
- tenantId: string;
711
- createdBy: string;
712
- scope?: "private" | "tenant" | "marketplace" | undefined;
713
- verified?: boolean | undefined;
714
- };
715
715
  createdAt: string;
716
716
  updatedAt: string;
717
717
  version?: string | undefined;
@@ -733,15 +733,15 @@ export declare const GeneAdoptionResultSchema: z.ZodObject<{
733
733
  issues: z.ZodDefault<z.ZodArray<z.ZodString, "many">>;
734
734
  }, "strip", z.ZodTypeAny, {
735
735
  issues: string[];
736
+ performance: number;
736
737
  passed: boolean;
737
738
  testsPassed: number;
738
739
  testsFailed: number;
739
- performance: number;
740
740
  }, {
741
+ performance: number;
741
742
  passed: boolean;
742
743
  testsPassed: number;
743
744
  testsFailed: number;
744
- performance: number;
745
745
  issues?: string[] | undefined;
746
746
  }>;
747
747
  integrated: z.ZodBoolean;
@@ -766,10 +766,10 @@ export declare const GeneAdoptionResultSchema: z.ZodObject<{
766
766
  agentId: string;
767
767
  sandboxResults: {
768
768
  issues: string[];
769
+ performance: number;
769
770
  passed: boolean;
770
771
  testsPassed: number;
771
772
  testsFailed: number;
772
- performance: number;
773
773
  };
774
774
  integrated: boolean;
775
775
  reason?: string | undefined;
@@ -782,10 +782,10 @@ export declare const GeneAdoptionResultSchema: z.ZodObject<{
782
782
  geneId: string;
783
783
  agentId: string;
784
784
  sandboxResults: {
785
+ performance: number;
785
786
  passed: boolean;
786
787
  testsPassed: number;
787
788
  testsFailed: number;
788
- performance: number;
789
789
  issues?: string[] | undefined;
790
790
  };
791
791
  integrated: boolean;
@@ -55,6 +55,7 @@ export declare class GeneAdopter {
55
55
  private metricsCollector?;
56
56
  private config;
57
57
  private adoptedGenes;
58
+ private geneContentCache;
58
59
  private matcher;
59
60
  private sandboxTester;
60
61
  constructor(geneBank: GeneBank, llm: LLMAdapter, config: Partial<GeneAdoptionConfig> & {
@@ -1 +1 @@
1
- {"version":3,"file":"GeneAdopter.d.ts","sourceRoot":"","sources":["../../src/gene-bank/GeneAdopter.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AACxB,OAAO,EAEH,kBAAkB,EACrB,MAAM,iBAAiB,CAAC;AACzB,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAC;AACtC,OAAO,EAAe,YAAY,EAAmB,MAAM,eAAe,CAAC;AAC3E,OAAO,EAAiB,eAAe,EAAqB,MAAM,iBAAiB,CAAC;AACpF,OAAO,KAAK,EAAE,UAAU,EAAE,MAAM,0BAA0B,CAAC;AAC3D,OAAO,KAAK,EAAE,gBAAgB,EAAE,MAAM,gCAAgC,CAAC;AA0BvE,eAAO,MAAM,wBAAwB;;;;;;;;;;;;;;;;;;;;;;;;EAqBnC,CAAC;AAEH,MAAM,MAAM,kBAAkB,GAAG,CAAC,CAAC,KAAK,CAAC,OAAO,wBAAwB,CAAC,CAAC;AAS1E,MAAM,WAAW,eAAe;IAE5B,MAAM,CAAC,EAAE,MAAM,CAAC;IAGhB,YAAY,CAAC,EAAE,YAAY,CAAC;IAG5B,SAAS,CAAC,EAAE,eAAe,EAAE,CAAC;IAG9B,WAAW,CAAC,EAAE,OAAO,CAAC;IAGtB,QAAQ,CAAC,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;CACtC;AASD,MAAM,WAAW,iBAAiB;IAE9B,MAAM,EAAE,MAAM,CAAC;IAGf,SAAS,EAAE,MAAM,CAAC;IAGlB,MAAM,EAAE,QAAQ,GAAG,SAAS,GAAG,QAAQ,GAAG,SAAS,CAAC;IAGpD,WAAW,EAAE;QACT,cAAc,EAAE,MAAM,CAAC;QACvB,WAAW,EAAE,MAAM,CAAC;QACpB,cAAc,EAAE,MAAM,CAAC;KAC1B,CAAC;IAGF,MAAM,EAAE,MAAM,EAAE,CAAC;CACpB;AASD,qBAAa,WAAW;IAOhB,OAAO,CAAC,QAAQ;IAChB,OAAO,CAAC,GAAG;IAEX,OAAO,CAAC,gBAAgB,CAAC;IAT7B,OAAO,CAAC,MAAM,CAAqB;IACnC,OAAO,CAAC,YAAY,CAA6C;IACjE,OAAO,CAAC,OAAO,CAAc;IAC7B,OAAO,CAAC,aAAa,CAAgB;gBAGzB,QAAQ,EAAE,QAAQ,EAClB,GAAG,EAAE,UAAU,EACvB,MAAM,EAAE,OAAO,CAAC,kBAAkB,CAAC,GAAG;QAAE,OAAO,EAAE,MAAM,CAAA;KAAE,EACjD,gBAAgB,CAAC,EAAE,gBAAgB,YAAA;IAczC,SAAS,CAAC,OAAO,EAAE,eAAe,GAAG,OAAO,CAAC,kBAAkB,CAAC;IAyMhE,gBAAgB,CAClB,YAAY,EAAE,YAAY,EAC1B,SAAS,EAAE,eAAe,EAAE,GAC7B,OAAO,CAAC,kBAAkB,EAAE,CAAC;YA8ClB,aAAa;IAa3B,mBAAmB,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM;IAoCzC,UAAU,CAAC,MAAM,EAAE,MAAM,GAAG,OAAO,CAAC,OAAO,CAAC;IAclD,aAAa,CAAC,MAAM,EAAE,MAAM,GAAG,iBAAiB,GAAG,IAAI;IAOvD,eAAe,IAAI,iBAAiB,EAAE;IAOtC,qBAAqB,CACjB,MAAM,EAAE,MAAM,EACd,WAAW,EAAE,OAAO,EACpB,OAAO,EAAE,MAAM,GAChB,IAAI;IAmCP,OAAO,CAAC,iBAAiB;IAgCzB,SAAS,IAAI,kBAAkB;IAO/B,YAAY,CAAC,OAAO,EAAE,OAAO,CAAC,kBAAkB,CAAC,GAAG,IAAI;CAM3D"}
1
+ {"version":3,"file":"GeneAdopter.d.ts","sourceRoot":"","sources":["../../src/gene-bank/GeneAdopter.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AACxB,OAAO,EAEH,kBAAkB,EACrB,MAAM,iBAAiB,CAAC;AACzB,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAC;AACtC,OAAO,EAAe,YAAY,EAAmB,MAAM,eAAe,CAAC;AAC3E,OAAO,EAAiB,eAAe,EAAqB,MAAM,iBAAiB,CAAC;AACpF,OAAO,KAAK,EAAE,UAAU,EAAE,MAAM,0BAA0B,CAAC;AAC3D,OAAO,KAAK,EAAE,gBAAgB,EAAE,MAAM,gCAAgC,CAAC;AA0BvE,eAAO,MAAM,wBAAwB;;;;;;;;;;;;;;;;;;;;;;;;EAqBnC,CAAC;AAEH,MAAM,MAAM,kBAAkB,GAAG,CAAC,CAAC,KAAK,CAAC,OAAO,wBAAwB,CAAC,CAAC;AAS1E,MAAM,WAAW,eAAe;IAE5B,MAAM,CAAC,EAAE,MAAM,CAAC;IAGhB,YAAY,CAAC,EAAE,YAAY,CAAC;IAG5B,SAAS,CAAC,EAAE,eAAe,EAAE,CAAC;IAG9B,WAAW,CAAC,EAAE,OAAO,CAAC;IAGtB,QAAQ,CAAC,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;CACtC;AASD,MAAM,WAAW,iBAAiB;IAE9B,MAAM,EAAE,MAAM,CAAC;IAGf,SAAS,EAAE,MAAM,CAAC;IAGlB,MAAM,EAAE,QAAQ,GAAG,SAAS,GAAG,QAAQ,GAAG,SAAS,CAAC;IAGpD,WAAW,EAAE;QACT,cAAc,EAAE,MAAM,CAAC;QACvB,WAAW,EAAE,MAAM,CAAC;QACpB,cAAc,EAAE,MAAM,CAAC;KAC1B,CAAC;IAGF,MAAM,EAAE,MAAM,EAAE,CAAC;CACpB;AASD,qBAAa,WAAW;IAQhB,OAAO,CAAC,QAAQ;IAChB,OAAO,CAAC,GAAG;IAEX,OAAO,CAAC,gBAAgB,CAAC;IAV7B,OAAO,CAAC,MAAM,CAAqB;IACnC,OAAO,CAAC,YAAY,CAA6C;IACjE,OAAO,CAAC,gBAAgB,CAAkC;IAC1D,OAAO,CAAC,OAAO,CAAc;IAC7B,OAAO,CAAC,aAAa,CAAgB;gBAGzB,QAAQ,EAAE,QAAQ,EAClB,GAAG,EAAE,UAAU,EACvB,MAAM,EAAE,OAAO,CAAC,kBAAkB,CAAC,GAAG;QAAE,OAAO,EAAE,MAAM,CAAA;KAAE,EACjD,gBAAgB,CAAC,EAAE,gBAAgB,YAAA;IAczC,SAAS,CAAC,OAAO,EAAE,eAAe,GAAG,OAAO,CAAC,kBAAkB,CAAC;IAyMhE,gBAAgB,CAClB,YAAY,EAAE,YAAY,EAC1B,SAAS,EAAE,eAAe,EAAE,GAC7B,OAAO,CAAC,kBAAkB,EAAE,CAAC;YA8ClB,aAAa;IA0B3B,mBAAmB,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM;IA0CzC,UAAU,CAAC,MAAM,EAAE,MAAM,GAAG,OAAO,CAAC,OAAO,CAAC;IAclD,aAAa,CAAC,MAAM,EAAE,MAAM,GAAG,iBAAiB,GAAG,IAAI;IAOvD,eAAe,IAAI,iBAAiB,EAAE;IAOtC,qBAAqB,CACjB,MAAM,EAAE,MAAM,EACd,WAAW,EAAE,OAAO,EACpB,OAAO,EAAE,MAAM,GAChB,IAAI;IAmCP,OAAO,CAAC,iBAAiB;IAgCzB,SAAS,IAAI,kBAAkB;IAO/B,YAAY,CAAC,OAAO,EAAE,OAAO,CAAC,kBAAkB,CAAC,GAAG,IAAI;CAM3D"}
@@ -16,6 +16,7 @@ export class GeneAdopter {
16
16
  metricsCollector;
17
17
  config;
18
18
  adoptedGenes = new Map();
19
+ geneContentCache = new Map();
19
20
  matcher;
20
21
  sandboxTester;
21
22
  constructor(geneBank, llm, config, metricsCollector) {
@@ -181,8 +182,20 @@ export class GeneAdopter {
181
182
  }
182
183
  return results;
183
184
  }
184
- async integrateGene(_gene) {
185
- return true;
185
+ async integrateGene(gene) {
186
+ let content = gene.content.instruction;
187
+ if (gene.content.examples && gene.content.examples.length > 0) {
188
+ content += '\n\nExamples:\n' + gene.content.examples
189
+ .map(e => `- ${e.scenario}: ${e.expectedBehavior}`)
190
+ .join('\n');
191
+ }
192
+ if (gene.content.contraindications.length > 0) {
193
+ content += '\n\nAvoid:\n' + gene.content.contraindications
194
+ .map(c => `- ${c}`)
195
+ .join('\n');
196
+ }
197
+ this.geneContentCache.set(gene.id, content);
198
+ return content.length > 0;
186
199
  }
187
200
  buildEnhancedPrompt(basePrompt) {
188
201
  const activeGenes = Array.from(this.adoptedGenes.values())
@@ -193,7 +206,13 @@ export class GeneAdopter {
193
206
  }
194
207
  const geneInstructions = [];
195
208
  for (const geneId of activeGenes) {
196
- geneInstructions.push(`[Gene ${geneId}]`);
209
+ const content = this.geneContentCache.get(geneId);
210
+ if (content) {
211
+ geneInstructions.push(content);
212
+ }
213
+ }
214
+ if (geneInstructions.length === 0) {
215
+ return basePrompt;
197
216
  }
198
217
  return `${basePrompt}
199
218
 
@@ -201,7 +220,7 @@ export class GeneAdopter {
201
220
 
202
221
  The following behavioral patterns have been adopted:
203
222
 
204
- ${geneInstructions.join('\n\n')}
223
+ ${geneInstructions.join('\n\n---\n\n')}
205
224
 
206
225
  Apply these patterns when relevant to the current task.`;
207
226
  }
@@ -1 +1 @@
1
- {"version":3,"file":"GeneAdopter.js","sourceRoot":"","sources":["../../src/gene-bank/GeneAdopter.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AAMxB,OAAO,EAAE,WAAW,EAAiC,MAAM,eAAe,CAAC;AAC3E,OAAO,EAAE,aAAa,EAAsC,MAAM,iBAAiB,CAAC;AA4BpF,MAAM,CAAC,MAAM,wBAAwB,GAAG,CAAC,CAAC,MAAM,CAAC;IAE7C,OAAO,EAAE,CAAC,CAAC,MAAM,EAAE;IAGnB,sBAAsB,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,GAAG,EAAE,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC;IAG1D,kBAAkB,EAAE,CAAC,CAAC,OAAO,EAAE,CAAC,OAAO,CAAC,IAAI,CAAC;IAG7C,SAAS,EAAE,CAAC,CAAC,OAAO,EAAE,CAAC,OAAO,CAAC,KAAK,CAAC;IAGrC,sBAAsB,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,OAAO,CAAC,GAAG,CAAC;IAG7D,gBAAgB,EAAE,CAAC,CAAC,OAAO,EAAE,CAAC,OAAO,CAAC,IAAI,CAAC;IAG3C,qBAAqB,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,GAAG,EAAE,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC;CAC5D,CAAC,CAAC;AA+DH,MAAM,OAAO,WAAW;IAOR;IACA;IAEA;IATJ,MAAM,CAAqB;IAC3B,YAAY,GAAmC,IAAI,GAAG,EAAE,CAAC;IACzD,OAAO,CAAc;IACrB,aAAa,CAAgB;IAErC,YACY,QAAkB,EAClB,GAAe,EACvB,MAAyD,EACjD,gBAAmC;QAHnC,aAAQ,GAAR,QAAQ,CAAU;QAClB,QAAG,GAAH,GAAG,CAAY;QAEf,qBAAgB,GAAhB,gBAAgB,CAAmB;QAE3C,IAAI,CAAC,MAAM,GAAG,wBAAwB,CAAC,KAAK,CAAC,MAAM,CAAC,CAAC;QACrD,IAAI,CAAC,OAAO,GAAG,IAAI,WAAW,EAAE,CAAC;QACjC,IAAI,CAAC,aAAa,GAAG,IAAI,aAAa,CAAC,IAAI,CAAC,GAAG,EAAE,SAAS,EAAE,IAAI,CAAC,gBAAgB,CAAC,CAAC;IACvF,CAAC;IASD,KAAK,CAAC,SAAS,CAAC,OAAwB;QACpC,MAAM,SAAS,GAAG,IAAI,CAAC,GAAG,EAAE,CAAC;QAE7B,IAAI,CAAC;YAED,IAAI,IAAI,GAAyB,IAAI,CAAC;YACtC,IAAI,WAAW,GAA2B,IAAI,CAAC;YAE/C,IAAI,OAAO,CAAC,MAAM,EAAE,CAAC;gBAEjB,IAAI,GAAG,MAAM,IAAI,CAAC,QAAQ,CAAC,OAAO,CAAC,OAAO,CAAC,MAAM,CAAC,CAAC;gBACnD,IAAI,CAAC,IAAI,EAAE,CAAC;oBACR,OAAO,IAAI,CAAC,iBAAiB,CACzB,OAAO,CAAC,MAAM,EACd,gBAAgB,EAChB,SAAS,CACZ,CAAC;gBACN,CAAC;YACL,CAAC;iBAAM,IAAI,OAAO,CAAC,YAAY,EAAE,CAAC;gBAE9B,MAAM,UAAU,GAAG,MAAM,IAAI,CAAC,QAAQ,CAAC,cAAc,EAAE,CAAC;gBACxD,WAAW,GAAG,MAAM,IAAI,CAAC,OAAO,CAAC,aAAa,CAAC,OAAO,CAAC,YAAY,EAAE,UAAU,CAAC,CAAC;gBAEjF,IAAI,CAAC,WAAW,EAAE,CAAC;oBACf,OAAO,IAAI,CAAC,iBAAiB,CACzB,SAAS,EACT,wBAAwB,EACxB,SAAS,CACZ,CAAC;gBACN,CAAC;gBAED,IAAI,GAAG,WAAW,CAAC,IAAI,CAAC;YAC5B,CAAC;iBAAM,CAAC;gBACJ,OAAO,IAAI,CAAC,iBAAiB,CACzB,SAAS,EACT,4CAA4C,EAC5C,SAAS,CACZ,CAAC;YACN,CAAC;YAGD,IAAI,IAAI,CAAC,YAAY,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,CAAC,EAAE,CAAC;gBACjC,OAAO,IAAI,CAAC,iBAAiB,CACzB,IAAI,CAAC,EAAE,EACP,sBAAsB,EACtB,SAAS,CACZ,CAAC;YACN,CAAC;YAGD,MAAM,eAAe,GAAG,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,YAAY,CAAC,MAAM,EAAE,CAAC,CAAC,MAAM,CACjE,MAAM,CAAC,EAAE,CAAC,MAAM,CAAC,MAAM,KAAK,QAAQ,IAAI,MAAM,CAAC,MAAM,KAAK,SAAS,CACtE,CAAC,MAAM,CAAC;YAET,IAAI,eAAe,IAAI,IAAI,CAAC,MAAM,CAAC,sBAAsB,EAAE,CAAC;gBACxD,OAAO,IAAI,CAAC,iBAAiB,CACzB,IAAI,CAAC,EAAE,EACP,iCAAiC,IAAI,CAAC,MAAM,CAAC,sBAAsB,WAAW,EAC9E,SAAS,CACZ,CAAC;YACN,CAAC;YAGD,IAAI,aAAa,GAA6B,IAAI,CAAC;YAEnD,IAAI,IAAI,CAAC,MAAM,CAAC,kBAAkB,IAAI,CAAC,OAAO,CAAC,WAAW,EAAE,CAAC;gBACzD,IAAI,CAAC,OAAO,CAAC,SAAS,IAAI,OAAO,CAAC,SAAS,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;oBACvD,OAAO,IAAI,CAAC,iBAAiB,CACzB,IAAI,CAAC,EAAE,EACP,yCAAyC,EACzC,SAAS,CACZ,CAAC;gBACN,CAAC;gBAED,aAAa,GAAG,MAAM,IAAI,CAAC,aAAa,CAAC,QAAQ,CAAC,IAAI,EAAE,OAAO,CAAC,SAAS,CAAC,CAAC;gBAE3E,IAAI,aAAa,CAAC,cAAc,KAAK,QAAQ,EAAE,CAAC;oBAC5C,OAAO;wBACH,OAAO,EAAE,KAAK;wBACd,MAAM,EAAE,IAAI,CAAC,EAAE;wBACf,OAAO,EAAE,IAAI,CAAC,MAAM,CAAC,OAAO;wBAC5B,cAAc,EAAE;4BACZ,MAAM,EAAE,KAAK;4BACb,WAAW,EAAE,aAAa,CAAC,OAAO,CAAC,MAAM;4BACzC,WAAW,EAAE,aAAa,CAAC,OAAO,CAAC,MAAM;4BACzC,WAAW,EAAE,aAAa,CAAC,OAAO,CAAC,kBAAkB;4BACrD,MAAM,EAAE,CAAC,aAAa,CAAC,MAAM,CAAC;yBACjC;wBACD,UAAU,EAAE,KAAK;wBACjB,MAAM,EAAE,wBAAwB,aAAa,CAAC,MAAM,EAAE;wBACtD,QAAQ,EAAE;4BACN,iBAAiB,EAAE,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE;4BAC3C,UAAU,EAAE,IAAI,CAAC,GAAG,EAAE,GAAG,SAAS;yBACrC;qBACJ,CAAC;gBACN,CAAC;YACL,CAAC;YAGD,MAAM,UAAU,GAAG,MAAM,IAAI,CAAC,aAAa,CAAC,IAAI,CAAC,CAAC;YAElD,IAAI,CAAC,UAAU,EAAE,CAAC;gBACd,OAAO,IAAI,CAAC,iBAAiB,CACzB,IAAI,CAAC,EAAE,EACP,0BAA0B,EAC1B,SAAS,CACZ,CAAC;YACN,CAAC;YAGD,IAAI,CAAC,YAAY,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,EAAE;gBAC3B,MAAM,EAAE,IAAI,CAAC,EAAE;gBACf,SAAS,EAAE,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE;gBACnC,MAAM,EAAE,QAAQ;gBAChB,WAAW,EAAE;oBACT,cAAc,EAAE,CAAC;oBACjB,WAAW,EAAE,CAAC;oBACd,cAAc,EAAE,CAAC;iBACpB;gBACD,MAAM,EAAE,EAAE;aACb,CAAC,CAAC;YAGH,IAAI,IAAI,CAAC,MAAM,CAAC,gBAAgB,EAAE,CAAC;gBAC/B,MAAM,IAAI,CAAC,QAAQ,CAAC,cAAc,CAC9B,IAAI,CAAC,EAAE,EACP,IAAI,CAAC,MAAM,CAAC,OAAO,EACnB,aAAa,EAAE,OAAO,CAAC,kBAAkB,IAAI,GAAG,CACnD,CAAC;YACN,CAAC;YAGD,IAAI,CAAC,gBAAgB,EAAE,QAAQ,CAAC;gBAC5B,KAAK,EAAE,MAAM;gBACb,SAAS,EAAE,aAAa;gBACxB,SAAS,EAAE,WAAW;gBACtB,OAAO,EAAE,6BAA6B,IAAI,CAAC,IAAI,KAAK,IAAI,CAAC,IAAI,kBAAkB,IAAI,CAAC,OAAO,CAAC,cAAc,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE;gBACvH,QAAQ,EAAE,IAAI,CAAC,GAAG,EAAE,GAAG,SAAS;gBAChC,QAAQ,EAAE;oBACN,MAAM,EAAE,IAAI,CAAC,EAAE;oBACf,QAAQ,EAAE,IAAI,CAAC,IAAI;oBACnB,QAAQ,EAAE,IAAI,CAAC,IAAI;oBACnB,MAAM,EAAE,IAAI,CAAC,MAAM;oBACnB,OAAO,EAAE,IAAI,CAAC,MAAM,CAAC,OAAO;oBAC5B,aAAa,EAAE,CAAC,CAAC,aAAa;oBAC9B,kBAAkB,EAAE,aAAa,EAAE,OAAO,CAAC,kBAAkB;iBAChE;aACJ,CAAC,CAAC;YAGH,OAAO;gBACH,OAAO,EAAE,IAAI;gBACb,MAAM,EAAE,IAAI,CAAC,EAAE;gBACf,OAAO,EAAE,IAAI,CAAC,MAAM,CAAC,OAAO;gBAC5B,cAAc,EAAE,aAAa;oBACzB,CAAC,CAAC;wBACI,MAAM,EAAE,IAAI;wBACZ,WAAW,EAAE,aAAa,CAAC,OAAO,CAAC,MAAM;wBACzC,WAAW,EAAE,aAAa,CAAC,OAAO,CAAC,MAAM;wBACzC,WAAW,EAAE,aAAa,CAAC,OAAO,CAAC,kBAAkB;wBACrD,MAAM,EAAE,EAAE;qBACb;oBACH,CAAC,CAAC;wBACI,MAAM,EAAE,IAAI;wBACZ,WAAW,EAAE,CAAC;wBACd,WAAW,EAAE,CAAC;wBACd,WAAW,EAAE,GAAG;wBAChB,MAAM,EAAE,EAAE;qBACb;gBACP,UAAU,EAAE,IAAI;gBAChB,QAAQ,EAAE;oBACN,iBAAiB,EAAE,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE;oBAC3C,UAAU,EAAE,IAAI,CAAC,GAAG,EAAE,GAAG,SAAS;iBACrC;aACJ,CAAC;QACN,CAAC;QAAC,OAAO,KAAK,EAAE,CAAC;YAEb,IAAI,CAAC,gBAAgB,EAAE,QAAQ,CAAC;gBAC5B,KAAK,EAAE,OAAO;gBACd,SAAS,EAAE,aAAa;gBACxB,SAAS,EAAE,WAAW;gBACtB,OAAO,EAAE,yBAAyB,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,eAAe,EAAE;gBAC5F,QAAQ,EAAE,IAAI,CAAC,GAAG,EAAE,GAAG,SAAS;gBAChC,QAAQ,EAAE;oBACN,MAAM,EAAE,OAAO,CAAC,MAAM,IAAI,SAAS;oBACnC,OAAO,EAAE,IAAI,CAAC,MAAM,CAAC,OAAO;oBAC5B,KAAK,EAAE,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,eAAe;iBAClE;aACJ,CAAC,CAAC;YAEH,OAAO,IAAI,CAAC,iBAAiB,CACzB,OAAO,CAAC,MAAM,IAAI,SAAS,EAC3B,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,eAAe,EACxD,SAAS,CACZ,CAAC;QACN,CAAC;IACL,CAAC;IAKD,KAAK,CAAC,gBAAgB,CAClB,YAA0B,EAC1B,SAA4B;QAE5B,IAAI,CAAC,IAAI,CAAC,MAAM,CAAC,SAAS,EAAE,CAAC;YACzB,OAAO,EAAE,CAAC;QACd,CAAC;QAGD,MAAM,UAAU,GAAG,MAAM,IAAI,CAAC,QAAQ,CAAC,cAAc,EAAE,CAAC;QACxD,MAAM,OAAO,GAAG,MAAM,IAAI,CAAC,OAAO,CAAC,WAAW,CAAC,YAAY,EAAE,UAAU,CAAC,CAAC;QAGzE,MAAM,cAAc,GAAG,OAAO,CAAC,MAAM,CACjC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,UAAU,IAAI,IAAI,CAAC,MAAM,CAAC,sBAAsB,CAC1D,CAAC;QAGF,MAAM,OAAO,GAAyB,EAAE,CAAC;QAEzC,KAAK,MAAM,KAAK,IAAI,cAAc,EAAE,CAAC;YAEjC,IAAI,CAAC,IAAI,CAAC,QAAQ,CAAC,YAAY,EAAE,EAAE,CAAC;gBAChC,MAAM;YACV,CAAC;YAED,MAAM,MAAM,GAAG,MAAM,IAAI,CAAC,SAAS,CAAC;gBAChC,MAAM,EAAE,KAAK,CAAC,IAAI,CAAC,EAAE;gBACrB,SAAS;aACZ,CAAC,CAAC;YAEH,OAAO,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC;YAGrB,IAAI,CAAC,MAAM,CAAC,OAAO,EAAE,CAAC;gBAClB,MAAM;YACV,CAAC;QACL,CAAC;QAED,OAAO,OAAO,CAAC;IACnB,CAAC;IASO,KAAK,CAAC,aAAa,CAAC,KAAoB;QAO5C,OAAO,IAAI,CAAC;IAChB,CAAC;IAKD,mBAAmB,CAAC,UAAkB;QAClC,MAAM,WAAW,GAAG,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,YAAY,CAAC,MAAM,EAAE,CAAC;aACrD,MAAM,CAAC,MAAM,CAAC,EAAE,CAAC,MAAM,CAAC,MAAM,KAAK,QAAQ,CAAC;aAC5C,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC;QAElC,IAAI,WAAW,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;YAC3B,OAAO,UAAU,CAAC;QACtB,CAAC;QAGD,MAAM,gBAAgB,GAAa,EAAE,CAAC;QAEtC,KAAK,MAAM,MAAM,IAAI,WAAW,EAAE,CAAC;YAE/B,gBAAgB,CAAC,IAAI,CAAC,SAAS,MAAM,GAAG,CAAC,CAAC;QAC9C,CAAC;QAGD,OAAO,GAAG,UAAU;;;;;;EAM1B,gBAAgB,CAAC,IAAI,CAAC,MAAM,CAAC;;wDAEyB,CAAC;IACrD,CAAC;IASD,KAAK,CAAC,UAAU,CAAC,MAAc;QAC3B,MAAM,MAAM,GAAG,IAAI,CAAC,YAAY,CAAC,GAAG,CAAC,MAAM,CAAC,CAAC;QAC7C,IAAI,CAAC,MAAM,EAAE,CAAC;YACV,OAAO,KAAK,CAAC;QACjB,CAAC;QAED,MAAM,CAAC,MAAM,GAAG,SAAS,CAAC;QAC1B,IAAI,CAAC,YAAY,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC;QACjC,OAAO,IAAI,CAAC;IAChB,CAAC;IAKD,aAAa,CAAC,MAAc;QACxB,OAAO,IAAI,CAAC,YAAY,CAAC,GAAG,CAAC,MAAM,CAAC,IAAI,IAAI,CAAC;IACjD,CAAC;IAKD,eAAe;QACX,OAAO,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,YAAY,CAAC,MAAM,EAAE,CAAC,CAAC;IAClD,CAAC;IAKD,qBAAqB,CACjB,MAAc,EACd,WAAoB,EACpB,OAAe;QAEf,MAAM,MAAM,GAAG,IAAI,CAAC,YAAY,CAAC,GAAG,CAAC,MAAM,CAAC,CAAC;QAC7C,IAAI,CAAC,MAAM,IAAI,MAAM,CAAC,MAAM,KAAK,QAAQ,EAAE,CAAC;YACxC,OAAO;QACX,CAAC;QAGD,MAAM,IAAI,GAAG,MAAM,CAAC,WAAW,CAAC;QAChC,IAAI,CAAC,cAAc,EAAE,CAAC;QAEtB,MAAM,cAAc,GAChB,CAAC,IAAI,CAAC,WAAW,GAAG,CAAC,IAAI,CAAC,cAAc,GAAG,CAAC,CAAC,GAAG,CAAC,WAAW,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;YACtE,IAAI,CAAC,cAAc,CAAC;QAExB,MAAM,aAAa,GACf,CAAC,IAAI,CAAC,cAAc,GAAG,CAAC,IAAI,CAAC,cAAc,GAAG,CAAC,CAAC,GAAG,OAAO,CAAC;YAC3D,IAAI,CAAC,cAAc,CAAC;QAExB,IAAI,CAAC,WAAW,GAAG,cAAc,CAAC;QAClC,IAAI,CAAC,cAAc,GAAG,aAAa,CAAC;QAGpC,IAAI,IAAI,CAAC,cAAc,IAAI,EAAE,IAAI,IAAI,CAAC,WAAW,GAAG,GAAG,EAAE,CAAC;YACtD,MAAM,CAAC,MAAM,CAAC,IAAI,CAAC,2BAA2B,CAAC,CAAC;YAChD,MAAM,CAAC,MAAM,GAAG,QAAQ,CAAC;QAC7B,CAAC;IACL,CAAC;IASO,iBAAiB,CACrB,MAAc,EACd,MAAc,EACd,SAAiB;QAEjB,OAAO;YACH,OAAO,EAAE,KAAK;YACd,MAAM;YACN,OAAO,EAAE,IAAI,CAAC,MAAM,CAAC,OAAO;YAC5B,cAAc,EAAE;gBACZ,MAAM,EAAE,KAAK;gBACb,WAAW,EAAE,CAAC;gBACd,WAAW,EAAE,CAAC;gBACd,WAAW,EAAE,CAAC;gBACd,MAAM,EAAE,CAAC,MAAM,CAAC;aACnB;YACD,UAAU,EAAE,KAAK;YACjB,MAAM;YACN,QAAQ,EAAE;gBACN,iBAAiB,EAAE,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE;gBAC3C,UAAU,EAAE,IAAI,CAAC,GAAG,EAAE,GAAG,SAAS;aACrC;SACJ,CAAC;IACN,CAAC;IASD,SAAS;QACL,OAAO,EAAE,GAAG,IAAI,CAAC,MAAM,EAAE,CAAC;IAC9B,CAAC;IAKD,YAAY,CAAC,OAAoC;QAC7C,IAAI,CAAC,MAAM,GAAG,wBAAwB,CAAC,KAAK,CAAC;YACzC,GAAG,IAAI,CAAC,MAAM;YACd,GAAG,OAAO;SACb,CAAC,CAAC;IACP,CAAC;CACJ"}
1
+ {"version":3,"file":"GeneAdopter.js","sourceRoot":"","sources":["../../src/gene-bank/GeneAdopter.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AAMxB,OAAO,EAAE,WAAW,EAAiC,MAAM,eAAe,CAAC;AAC3E,OAAO,EAAE,aAAa,EAAsC,MAAM,iBAAiB,CAAC;AA4BpF,MAAM,CAAC,MAAM,wBAAwB,GAAG,CAAC,CAAC,MAAM,CAAC;IAE7C,OAAO,EAAE,CAAC,CAAC,MAAM,EAAE;IAGnB,sBAAsB,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,GAAG,EAAE,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC;IAG1D,kBAAkB,EAAE,CAAC,CAAC,OAAO,EAAE,CAAC,OAAO,CAAC,IAAI,CAAC;IAG7C,SAAS,EAAE,CAAC,CAAC,OAAO,EAAE,CAAC,OAAO,CAAC,KAAK,CAAC;IAGrC,sBAAsB,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,OAAO,CAAC,GAAG,CAAC;IAG7D,gBAAgB,EAAE,CAAC,CAAC,OAAO,EAAE,CAAC,OAAO,CAAC,IAAI,CAAC;IAG3C,qBAAqB,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,GAAG,EAAE,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC;CAC5D,CAAC,CAAC;AA+DH,MAAM,OAAO,WAAW;IAQR;IACA;IAEA;IAVJ,MAAM,CAAqB;IAC3B,YAAY,GAAmC,IAAI,GAAG,EAAE,CAAC;IACzD,gBAAgB,GAAwB,IAAI,GAAG,EAAE,CAAC;IAClD,OAAO,CAAc;IACrB,aAAa,CAAgB;IAErC,YACY,QAAkB,EAClB,GAAe,EACvB,MAAyD,EACjD,gBAAmC;QAHnC,aAAQ,GAAR,QAAQ,CAAU;QAClB,QAAG,GAAH,GAAG,CAAY;QAEf,qBAAgB,GAAhB,gBAAgB,CAAmB;QAE3C,IAAI,CAAC,MAAM,GAAG,wBAAwB,CAAC,KAAK,CAAC,MAAM,CAAC,CAAC;QACrD,IAAI,CAAC,OAAO,GAAG,IAAI,WAAW,EAAE,CAAC;QACjC,IAAI,CAAC,aAAa,GAAG,IAAI,aAAa,CAAC,IAAI,CAAC,GAAG,EAAE,SAAS,EAAE,IAAI,CAAC,gBAAgB,CAAC,CAAC;IACvF,CAAC;IASD,KAAK,CAAC,SAAS,CAAC,OAAwB;QACpC,MAAM,SAAS,GAAG,IAAI,CAAC,GAAG,EAAE,CAAC;QAE7B,IAAI,CAAC;YAED,IAAI,IAAI,GAAyB,IAAI,CAAC;YACtC,IAAI,WAAW,GAA2B,IAAI,CAAC;YAE/C,IAAI,OAAO,CAAC,MAAM,EAAE,CAAC;gBAEjB,IAAI,GAAG,MAAM,IAAI,CAAC,QAAQ,CAAC,OAAO,CAAC,OAAO,CAAC,MAAM,CAAC,CAAC;gBACnD,IAAI,CAAC,IAAI,EAAE,CAAC;oBACR,OAAO,IAAI,CAAC,iBAAiB,CACzB,OAAO,CAAC,MAAM,EACd,gBAAgB,EAChB,SAAS,CACZ,CAAC;gBACN,CAAC;YACL,CAAC;iBAAM,IAAI,OAAO,CAAC,YAAY,EAAE,CAAC;gBAE9B,MAAM,UAAU,GAAG,MAAM,IAAI,CAAC,QAAQ,CAAC,cAAc,EAAE,CAAC;gBACxD,WAAW,GAAG,MAAM,IAAI,CAAC,OAAO,CAAC,aAAa,CAAC,OAAO,CAAC,YAAY,EAAE,UAAU,CAAC,CAAC;gBAEjF,IAAI,CAAC,WAAW,EAAE,CAAC;oBACf,OAAO,IAAI,CAAC,iBAAiB,CACzB,SAAS,EACT,wBAAwB,EACxB,SAAS,CACZ,CAAC;gBACN,CAAC;gBAED,IAAI,GAAG,WAAW,CAAC,IAAI,CAAC;YAC5B,CAAC;iBAAM,CAAC;gBACJ,OAAO,IAAI,CAAC,iBAAiB,CACzB,SAAS,EACT,4CAA4C,EAC5C,SAAS,CACZ,CAAC;YACN,CAAC;YAGD,IAAI,IAAI,CAAC,YAAY,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,CAAC,EAAE,CAAC;gBACjC,OAAO,IAAI,CAAC,iBAAiB,CACzB,IAAI,CAAC,EAAE,EACP,sBAAsB,EACtB,SAAS,CACZ,CAAC;YACN,CAAC;YAGD,MAAM,eAAe,GAAG,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,YAAY,CAAC,MAAM,EAAE,CAAC,CAAC,MAAM,CACjE,MAAM,CAAC,EAAE,CAAC,MAAM,CAAC,MAAM,KAAK,QAAQ,IAAI,MAAM,CAAC,MAAM,KAAK,SAAS,CACtE,CAAC,MAAM,CAAC;YAET,IAAI,eAAe,IAAI,IAAI,CAAC,MAAM,CAAC,sBAAsB,EAAE,CAAC;gBACxD,OAAO,IAAI,CAAC,iBAAiB,CACzB,IAAI,CAAC,EAAE,EACP,iCAAiC,IAAI,CAAC,MAAM,CAAC,sBAAsB,WAAW,EAC9E,SAAS,CACZ,CAAC;YACN,CAAC;YAGD,IAAI,aAAa,GAA6B,IAAI,CAAC;YAEnD,IAAI,IAAI,CAAC,MAAM,CAAC,kBAAkB,IAAI,CAAC,OAAO,CAAC,WAAW,EAAE,CAAC;gBACzD,IAAI,CAAC,OAAO,CAAC,SAAS,IAAI,OAAO,CAAC,SAAS,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;oBACvD,OAAO,IAAI,CAAC,iBAAiB,CACzB,IAAI,CAAC,EAAE,EACP,yCAAyC,EACzC,SAAS,CACZ,CAAC;gBACN,CAAC;gBAED,aAAa,GAAG,MAAM,IAAI,CAAC,aAAa,CAAC,QAAQ,CAAC,IAAI,EAAE,OAAO,CAAC,SAAS,CAAC,CAAC;gBAE3E,IAAI,aAAa,CAAC,cAAc,KAAK,QAAQ,EAAE,CAAC;oBAC5C,OAAO;wBACH,OAAO,EAAE,KAAK;wBACd,MAAM,EAAE,IAAI,CAAC,EAAE;wBACf,OAAO,EAAE,IAAI,CAAC,MAAM,CAAC,OAAO;wBAC5B,cAAc,EAAE;4BACZ,MAAM,EAAE,KAAK;4BACb,WAAW,EAAE,aAAa,CAAC,OAAO,CAAC,MAAM;4BACzC,WAAW,EAAE,aAAa,CAAC,OAAO,CAAC,MAAM;4BACzC,WAAW,EAAE,aAAa,CAAC,OAAO,CAAC,kBAAkB;4BACrD,MAAM,EAAE,CAAC,aAAa,CAAC,MAAM,CAAC;yBACjC;wBACD,UAAU,EAAE,KAAK;wBACjB,MAAM,EAAE,wBAAwB,aAAa,CAAC,MAAM,EAAE;wBACtD,QAAQ,EAAE;4BACN,iBAAiB,EAAE,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE;4BAC3C,UAAU,EAAE,IAAI,CAAC,GAAG,EAAE,GAAG,SAAS;yBACrC;qBACJ,CAAC;gBACN,CAAC;YACL,CAAC;YAGD,MAAM,UAAU,GAAG,MAAM,IAAI,CAAC,aAAa,CAAC,IAAI,CAAC,CAAC;YAElD,IAAI,CAAC,UAAU,EAAE,CAAC;gBACd,OAAO,IAAI,CAAC,iBAAiB,CACzB,IAAI,CAAC,EAAE,EACP,0BAA0B,EAC1B,SAAS,CACZ,CAAC;YACN,CAAC;YAGD,IAAI,CAAC,YAAY,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,EAAE;gBAC3B,MAAM,EAAE,IAAI,CAAC,EAAE;gBACf,SAAS,EAAE,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE;gBACnC,MAAM,EAAE,QAAQ;gBAChB,WAAW,EAAE;oBACT,cAAc,EAAE,CAAC;oBACjB,WAAW,EAAE,CAAC;oBACd,cAAc,EAAE,CAAC;iBACpB;gBACD,MAAM,EAAE,EAAE;aACb,CAAC,CAAC;YAGH,IAAI,IAAI,CAAC,MAAM,CAAC,gBAAgB,EAAE,CAAC;gBAC/B,MAAM,IAAI,CAAC,QAAQ,CAAC,cAAc,CAC9B,IAAI,CAAC,EAAE,EACP,IAAI,CAAC,MAAM,CAAC,OAAO,EACnB,aAAa,EAAE,OAAO,CAAC,kBAAkB,IAAI,GAAG,CACnD,CAAC;YACN,CAAC;YAGD,IAAI,CAAC,gBAAgB,EAAE,QAAQ,CAAC;gBAC5B,KAAK,EAAE,MAAM;gBACb,SAAS,EAAE,aAAa;gBACxB,SAAS,EAAE,WAAW;gBACtB,OAAO,EAAE,6BAA6B,IAAI,CAAC,IAAI,KAAK,IAAI,CAAC,IAAI,kBAAkB,IAAI,CAAC,OAAO,CAAC,cAAc,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE;gBACvH,QAAQ,EAAE,IAAI,CAAC,GAAG,EAAE,GAAG,SAAS;gBAChC,QAAQ,EAAE;oBACN,MAAM,EAAE,IAAI,CAAC,EAAE;oBACf,QAAQ,EAAE,IAAI,CAAC,IAAI;oBACnB,QAAQ,EAAE,IAAI,CAAC,IAAI;oBACnB,MAAM,EAAE,IAAI,CAAC,MAAM;oBACnB,OAAO,EAAE,IAAI,CAAC,MAAM,CAAC,OAAO;oBAC5B,aAAa,EAAE,CAAC,CAAC,aAAa;oBAC9B,kBAAkB,EAAE,aAAa,EAAE,OAAO,CAAC,kBAAkB;iBAChE;aACJ,CAAC,CAAC;YAGH,OAAO;gBACH,OAAO,EAAE,IAAI;gBACb,MAAM,EAAE,IAAI,CAAC,EAAE;gBACf,OAAO,EAAE,IAAI,CAAC,MAAM,CAAC,OAAO;gBAC5B,cAAc,EAAE,aAAa;oBACzB,CAAC,CAAC;wBACI,MAAM,EAAE,IAAI;wBACZ,WAAW,EAAE,aAAa,CAAC,OAAO,CAAC,MAAM;wBACzC,WAAW,EAAE,aAAa,CAAC,OAAO,CAAC,MAAM;wBACzC,WAAW,EAAE,aAAa,CAAC,OAAO,CAAC,kBAAkB;wBACrD,MAAM,EAAE,EAAE;qBACb;oBACH,CAAC,CAAC;wBACI,MAAM,EAAE,IAAI;wBACZ,WAAW,EAAE,CAAC;wBACd,WAAW,EAAE,CAAC;wBACd,WAAW,EAAE,GAAG;wBAChB,MAAM,EAAE,EAAE;qBACb;gBACP,UAAU,EAAE,IAAI;gBAChB,QAAQ,EAAE;oBACN,iBAAiB,EAAE,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE;oBAC3C,UAAU,EAAE,IAAI,CAAC,GAAG,EAAE,GAAG,SAAS;iBACrC;aACJ,CAAC;QACN,CAAC;QAAC,OAAO,KAAK,EAAE,CAAC;YAEb,IAAI,CAAC,gBAAgB,EAAE,QAAQ,CAAC;gBAC5B,KAAK,EAAE,OAAO;gBACd,SAAS,EAAE,aAAa;gBACxB,SAAS,EAAE,WAAW;gBACtB,OAAO,EAAE,yBAAyB,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,eAAe,EAAE;gBAC5F,QAAQ,EAAE,IAAI,CAAC,GAAG,EAAE,GAAG,SAAS;gBAChC,QAAQ,EAAE;oBACN,MAAM,EAAE,OAAO,CAAC,MAAM,IAAI,SAAS;oBACnC,OAAO,EAAE,IAAI,CAAC,MAAM,CAAC,OAAO;oBAC5B,KAAK,EAAE,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,eAAe;iBAClE;aACJ,CAAC,CAAC;YAEH,OAAO,IAAI,CAAC,iBAAiB,CACzB,OAAO,CAAC,MAAM,IAAI,SAAS,EAC3B,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,eAAe,EACxD,SAAS,CACZ,CAAC;QACN,CAAC;IACL,CAAC;IAKD,KAAK,CAAC,gBAAgB,CAClB,YAA0B,EAC1B,SAA4B;QAE5B,IAAI,CAAC,IAAI,CAAC,MAAM,CAAC,SAAS,EAAE,CAAC;YACzB,OAAO,EAAE,CAAC;QACd,CAAC;QAGD,MAAM,UAAU,GAAG,MAAM,IAAI,CAAC,QAAQ,CAAC,cAAc,EAAE,CAAC;QACxD,MAAM,OAAO,GAAG,MAAM,IAAI,CAAC,OAAO,CAAC,WAAW,CAAC,YAAY,EAAE,UAAU,CAAC,CAAC;QAGzE,MAAM,cAAc,GAAG,OAAO,CAAC,MAAM,CACjC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,UAAU,IAAI,IAAI,CAAC,MAAM,CAAC,sBAAsB,CAC1D,CAAC;QAGF,MAAM,OAAO,GAAyB,EAAE,CAAC;QAEzC,KAAK,MAAM,KAAK,IAAI,cAAc,EAAE,CAAC;YAEjC,IAAI,CAAC,IAAI,CAAC,QAAQ,CAAC,YAAY,EAAE,EAAE,CAAC;gBAChC,MAAM;YACV,CAAC;YAED,MAAM,MAAM,GAAG,MAAM,IAAI,CAAC,SAAS,CAAC;gBAChC,MAAM,EAAE,KAAK,CAAC,IAAI,CAAC,EAAE;gBACrB,SAAS;aACZ,CAAC,CAAC;YAEH,OAAO,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC;YAGrB,IAAI,CAAC,MAAM,CAAC,OAAO,EAAE,CAAC;gBAClB,MAAM;YACV,CAAC;QACL,CAAC;QAED,OAAO,OAAO,CAAC;IACnB,CAAC;IASO,KAAK,CAAC,aAAa,CAAC,IAAmB;QAC3C,IAAI,OAAO,GAAG,IAAI,CAAC,OAAO,CAAC,WAAW,CAAC;QAGvC,IAAI,IAAI,CAAC,OAAO,CAAC,QAAQ,IAAI,IAAI,CAAC,OAAO,CAAC,QAAQ,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;YAC5D,OAAO,IAAI,iBAAiB,GAAG,IAAI,CAAC,OAAO,CAAC,QAAQ;iBAC/C,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,KAAK,CAAC,CAAC,QAAQ,KAAK,CAAC,CAAC,gBAAgB,EAAE,CAAC;iBAClD,IAAI,CAAC,IAAI,CAAC,CAAC;QACpB,CAAC;QAGD,IAAI,IAAI,CAAC,OAAO,CAAC,iBAAiB,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;YAC5C,OAAO,IAAI,cAAc,GAAG,IAAI,CAAC,OAAO,CAAC,iBAAiB;iBACrD,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,KAAK,CAAC,EAAE,CAAC;iBAClB,IAAI,CAAC,IAAI,CAAC,CAAC;QACpB,CAAC;QAGD,IAAI,CAAC,gBAAgB,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,EAAE,OAAO,CAAC,CAAC;QAE5C,OAAO,OAAO,CAAC,MAAM,GAAG,CAAC,CAAC;IAC9B,CAAC;IAKD,mBAAmB,CAAC,UAAkB;QAClC,MAAM,WAAW,GAAG,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,YAAY,CAAC,MAAM,EAAE,CAAC;aACrD,MAAM,CAAC,MAAM,CAAC,EAAE,CAAC,MAAM,CAAC,MAAM,KAAK,QAAQ,CAAC;aAC5C,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC;QAElC,IAAI,WAAW,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;YAC3B,OAAO,UAAU,CAAC;QACtB,CAAC;QAGD,MAAM,gBAAgB,GAAa,EAAE,CAAC;QAEtC,KAAK,MAAM,MAAM,IAAI,WAAW,EAAE,CAAC;YAC/B,MAAM,OAAO,GAAG,IAAI,CAAC,gBAAgB,CAAC,GAAG,CAAC,MAAM,CAAC,CAAC;YAClD,IAAI,OAAO,EAAE,CAAC;gBACV,gBAAgB,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC;YACnC,CAAC;QACL,CAAC;QAED,IAAI,gBAAgB,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;YAChC,OAAO,UAAU,CAAC;QACtB,CAAC;QAGD,OAAO,GAAG,UAAU;;;;;;EAM1B,gBAAgB,CAAC,IAAI,CAAC,aAAa,CAAC;;wDAEkB,CAAC;IACrD,CAAC;IASD,KAAK,CAAC,UAAU,CAAC,MAAc;QAC3B,MAAM,MAAM,GAAG,IAAI,CAAC,YAAY,CAAC,GAAG,CAAC,MAAM,CAAC,CAAC;QAC7C,IAAI,CAAC,MAAM,EAAE,CAAC;YACV,OAAO,KAAK,CAAC;QACjB,CAAC;QAED,MAAM,CAAC,MAAM,GAAG,SAAS,CAAC;QAC1B,IAAI,CAAC,YAAY,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC;QACjC,OAAO,IAAI,CAAC;IAChB,CAAC;IAKD,aAAa,CAAC,MAAc;QACxB,OAAO,IAAI,CAAC,YAAY,CAAC,GAAG,CAAC,MAAM,CAAC,IAAI,IAAI,CAAC;IACjD,CAAC;IAKD,eAAe;QACX,OAAO,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,YAAY,CAAC,MAAM,EAAE,CAAC,CAAC;IAClD,CAAC;IAKD,qBAAqB,CACjB,MAAc,EACd,WAAoB,EACpB,OAAe;QAEf,MAAM,MAAM,GAAG,IAAI,CAAC,YAAY,CAAC,GAAG,CAAC,MAAM,CAAC,CAAC;QAC7C,IAAI,CAAC,MAAM,IAAI,MAAM,CAAC,MAAM,KAAK,QAAQ,EAAE,CAAC;YACxC,OAAO;QACX,CAAC;QAGD,MAAM,IAAI,GAAG,MAAM,CAAC,WAAW,CAAC;QAChC,IAAI,CAAC,cAAc,EAAE,CAAC;QAEtB,MAAM,cAAc,GAChB,CAAC,IAAI,CAAC,WAAW,GAAG,CAAC,IAAI,CAAC,cAAc,GAAG,CAAC,CAAC,GAAG,CAAC,WAAW,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;YACtE,IAAI,CAAC,cAAc,CAAC;QAExB,MAAM,aAAa,GACf,CAAC,IAAI,CAAC,cAAc,GAAG,CAAC,IAAI,CAAC,cAAc,GAAG,CAAC,CAAC,GAAG,OAAO,CAAC;YAC3D,IAAI,CAAC,cAAc,CAAC;QAExB,IAAI,CAAC,WAAW,GAAG,cAAc,CAAC;QAClC,IAAI,CAAC,cAAc,GAAG,aAAa,CAAC;QAGpC,IAAI,IAAI,CAAC,cAAc,IAAI,EAAE,IAAI,IAAI,CAAC,WAAW,GAAG,GAAG,EAAE,CAAC;YACtD,MAAM,CAAC,MAAM,CAAC,IAAI,CAAC,2BAA2B,CAAC,CAAC;YAChD,MAAM,CAAC,MAAM,GAAG,QAAQ,CAAC;QAC7B,CAAC;IACL,CAAC;IASO,iBAAiB,CACrB,MAAc,EACd,MAAc,EACd,SAAiB;QAEjB,OAAO;YACH,OAAO,EAAE,KAAK;YACd,MAAM;YACN,OAAO,EAAE,IAAI,CAAC,MAAM,CAAC,OAAO;YAC5B,cAAc,EAAE;gBACZ,MAAM,EAAE,KAAK;gBACb,WAAW,EAAE,CAAC;gBACd,WAAW,EAAE,CAAC;gBACd,WAAW,EAAE,CAAC;gBACd,MAAM,EAAE,CAAC,MAAM,CAAC;aACnB;YACD,UAAU,EAAE,KAAK;YACjB,MAAM;YACN,QAAQ,EAAE;gBACN,iBAAiB,EAAE,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE;gBAC3C,UAAU,EAAE,IAAI,CAAC,GAAG,EAAE,GAAG,SAAS;aACrC;SACJ,CAAC;IACN,CAAC;IASD,SAAS;QACL,OAAO,EAAE,GAAG,IAAI,CAAC,MAAM,EAAE,CAAC;IAC9B,CAAC;IAKD,YAAY,CAAC,OAAoC;QAC7C,IAAI,CAAC,MAAM,GAAG,wBAAwB,CAAC,KAAK,CAAC;YACzC,GAAG,IAAI,CAAC,MAAM;YACd,GAAG,OAAO;SACb,CAAC,CAAC;IACP,CAAC;CACJ"}
@@ -26,27 +26,27 @@ export declare const GeneSearchFiltersSchema: z.ZodObject<{
26
26
  offset: z.ZodDefault<z.ZodNumber>;
27
27
  }, "strip", z.ZodTypeAny, {
28
28
  verifiedOnly: boolean;
29
- sortBy: "fitness" | "createdAt" | "updatedAt" | "adoptions";
29
+ sortBy: "fitness" | "adoptions" | "createdAt" | "updatedAt";
30
30
  sortOrder: "asc" | "desc";
31
31
  limit: number;
32
32
  offset: number;
33
33
  type?: string[] | undefined;
34
- domain?: string[] | undefined;
35
34
  tenantId?: string | undefined;
36
- scope?: string[] | undefined;
35
+ domain?: string[] | undefined;
37
36
  tags?: string[] | undefined;
38
37
  minFitness?: number | undefined;
39
38
  minAdoptions?: number | undefined;
39
+ scope?: string[] | undefined;
40
40
  }, {
41
41
  type?: string[] | undefined;
42
- domain?: string[] | undefined;
43
42
  tenantId?: string | undefined;
44
- scope?: string[] | undefined;
43
+ domain?: string[] | undefined;
45
44
  tags?: string[] | undefined;
46
45
  minFitness?: number | undefined;
47
46
  minAdoptions?: number | undefined;
47
+ scope?: string[] | undefined;
48
48
  verifiedOnly?: boolean | undefined;
49
- sortBy?: "fitness" | "createdAt" | "updatedAt" | "adoptions" | undefined;
49
+ sortBy?: "fitness" | "adoptions" | "createdAt" | "updatedAt" | undefined;
50
50
  sortOrder?: "asc" | "desc" | undefined;
51
51
  limit?: number | undefined;
52
52
  offset?: number | undefined;
@@ -11,21 +11,21 @@ export declare const GeneExtractionConfigSchema: z.ZodObject<{
11
11
  maxTokens: z.ZodDefault<z.ZodNumber>;
12
12
  temperature: z.ZodDefault<z.ZodNumber>;
13
13
  }, "strip", z.ZodTypeAny, {
14
- temperature: number;
15
14
  minFitnessThreshold: number;
15
+ temperature: number;
16
+ maxTokens: number;
16
17
  minFitnessGain: number;
17
18
  minConfidence: number;
18
19
  autoExtract: boolean;
19
- maxTokens: number;
20
20
  extractionModel?: string | undefined;
21
21
  }, {
22
- temperature?: number | undefined;
23
22
  minFitnessThreshold?: number | undefined;
23
+ temperature?: number | undefined;
24
+ maxTokens?: number | undefined;
24
25
  minFitnessGain?: number | undefined;
25
26
  minConfidence?: number | undefined;
26
27
  autoExtract?: boolean | undefined;
27
28
  extractionModel?: string | undefined;
28
- maxTokens?: number | undefined;
29
29
  }>;
30
30
  export type GeneExtractionConfig = z.infer<typeof GeneExtractionConfigSchema>;
31
31
  export interface MutationContext {
@@ -0,0 +1,26 @@
1
+ import type { CognitiveGene, GeneSearchFilters } from './index.js';
2
+ import type { GeneBank } from './GeneBank.js';
3
+ import type { MetricsCollector } from '../monitoring/MetricsCollector.js';
4
+ export interface MarketplaceClientOptions {
5
+ marketplaceUrl?: string;
6
+ apiKey?: string;
7
+ }
8
+ export declare class MarketplaceClient {
9
+ private geneBank;
10
+ private metricsCollector?;
11
+ readonly marketplaceUrl: string;
12
+ private apiKey;
13
+ constructor(geneBank: GeneBank, options?: MarketplaceClientOptions, metricsCollector?: MetricsCollector | undefined);
14
+ publishToMarketplace(geneId: string): Promise<{
15
+ success: boolean;
16
+ marketplaceId?: string;
17
+ error?: string;
18
+ }>;
19
+ discoverGenes(filters: Partial<GeneSearchFilters>): Promise<CognitiveGene[]>;
20
+ adoptFromMarketplace(marketplaceGeneId: string): Promise<CognitiveGene>;
21
+ private sanitizeForMarketplace;
22
+ private httpGet;
23
+ private httpPost;
24
+ private buildHeaders;
25
+ }
26
+ //# sourceMappingURL=MarketplaceClient.d.ts.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"MarketplaceClient.d.ts","sourceRoot":"","sources":["../../src/gene-bank/MarketplaceClient.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,aAAa,EAAE,iBAAiB,EAAE,MAAM,YAAY,CAAC;AACnE,OAAO,KAAK,EAAE,QAAQ,EAAE,MAAM,eAAe,CAAC;AAC9C,OAAO,KAAK,EAAE,gBAAgB,EAAE,MAAM,mCAAmC,CAAC;AAY1E,MAAM,WAAW,wBAAwB;IACrC,cAAc,CAAC,EAAE,MAAM,CAAC;IACxB,MAAM,CAAC,EAAE,MAAM,CAAC;CACnB;AAED,qBAAa,iBAAiB;IAKtB,OAAO,CAAC,QAAQ;IAEhB,OAAO,CAAC,gBAAgB,CAAC;IAN7B,QAAQ,CAAC,cAAc,EAAE,MAAM,CAAC;IAChC,OAAO,CAAC,MAAM,CAAqB;gBAGvB,QAAQ,EAAE,QAAQ,EAC1B,OAAO,CAAC,EAAE,wBAAwB,EAC1B,gBAAgB,CAAC,EAAE,gBAAgB,YAAA;IAUzC,oBAAoB,CAAC,MAAM,EAAE,MAAM,GAAG,OAAO,CAAC;QAAE,OAAO,EAAE,OAAO,CAAC;QAAC,aAAa,CAAC,EAAE,MAAM,CAAC;QAAC,KAAK,CAAC,EAAE,MAAM,CAAA;KAAE,CAAC;IAmD3G,aAAa,CAAC,OAAO,EAAE,OAAO,CAAC,iBAAiB,CAAC,GAAG,OAAO,CAAC,aAAa,EAAE,CAAC;IA0C5E,oBAAoB,CAAC,iBAAiB,EAAE,MAAM,GAAG,OAAO,CAAC,aAAa,CAAC;IAsC7E,OAAO,CAAC,sBAAsB;YAMhB,OAAO;YAOP,QAAQ;IAQtB,OAAO,CAAC,YAAY;CASvB"}